No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G25680 |
| fragaria_vesca | FvH4_4g28210 |
| malus_domestica | MD13G1047900.v1.1 MD13G1048000.v1.1 MD16G1049600.v1.1 |
| prunus_persica | Prupe.1G304100_v2.0.a1 Prupe.1G304100_v2.0.a1 |
| pyrus_communis | pycom13g04210 pycom16g04310 |
| rosa_chinensis | RchiOBHm_Chr4g0435981 |
| rosa_laevigata | RLG00000006543 |
| rosa_multiflora | Rmu_sc0018865.1_g000006 Rmu_sc0031374.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00377150 |
| rosa_rugosa | Rorug04G0291100 |
| rosa_samantha | Rh4AG345400 Rh4BG354300 Rh4BG354400 Rh4CG368800 Rh4CG368900 Rh4DG348100 |
| rosa_wichuraiana | Rw4G030200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 73 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 859 |
| AccIII | TCCGGA | 1 cut(s) | 181 |
| AciI | CCGC | 8 cut(s) | 138, 201, 232, 282, 313, 863, 1594, 1729 |
| AclWI | GGATC | 5 cut(s) | 105, 840, 853, 960, 1208 |
| AcoI | YGGCCR | 1 cut(s) | 1092 |
| AcsI | RAATTY | 1 cut(s) | 1650 |
| AcuI | CTGAAG | 5 cut(s) | 345, 555, 680, 1050, 1256 |
| AcyI | GRCGYC | 1 cut(s) | 70 |
| AfaI | GTAC | 2 cut(s) | 700, 1707 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 842, 859, 865, 1702 |
| AgeI | ACCGGT | 1 cut(s) | 514 |
| AgsI | TTSAA | 5 cut(s) | 652, 671, 1161, 1415, 1628 |
| AhlI | ACTAGT | 1 cut(s) | 431 |
| AjnI | CCWGG | 2 cut(s) | 858, 994 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 37, 69, 1141, 1173 |
| Alw21I | GWGCWC | 1 cut(s) | 905 |
| Alw26I | GTCTC | 8 cut(s) | 518, 523, 530, 946, 1066, 1225, 1490, 1580 |
| AlwI | GGATC | 5 cut(s) | 105, 840, 853, 960, 1208 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 380, 578, 955 |
| Ama87I | CYCGRG | 1 cut(s) | 122 |
| Aor13HI | TCCGGA | 1 cut(s) | 181 |
| AoxI | GGCC | 3 cut(s) | 125, 867, 1092 |
| ApeKI | GCWGC | 5 cut(s) | 380, 806, 1175, 1379, 1451 |
| ApoI | RAATTY | 1 cut(s) | 1650 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 824, 856 |
| AsiGI | ACCGGT | 1 cut(s) | 514 |
| AspLEI | GCGC | 1 cut(s) | 973 |
| AspS9I | GGNCC | 9 cut(s) | 125, 184, 209, 290, 512, 531, 795, 832, 1281 |
| AsuC2I | CCSGG | 2 cut(s) | 608, 1096 |
| AsuHPI | GGTGA | 2 cut(s) | 885, 984 |
| AsuII | TTCGAA | 1 cut(s) | 730 |
| AvaI | CYCGRG | 1 cut(s) | 122 |
| AvaII | GGWCC | 8 cut(s) | 184, 209, 290, 512, 531, 795, 832, 1281 |
| BamHI | GGATCC | 1 cut(s) | 845 |
| BanII | GRGCYC | 1 cut(s) | 905 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 343, 375 |
| BauI | CACGAG | 1 cut(s) | 452 |
| BbsI | GAAGAC | 1 cut(s) | 1308 |
| Bbv12I | GWGCWC | 1 cut(s) | 905 |
| BbvI | GCAGC | 5 cut(s) | 367, 793, 1187, 1366, 1463 |
| BccI | CCATC | 5 cut(s) | 503, 714, 784, 857, 1261 |
| BceAI | ACGGC | 1 cut(s) | 214 |
| BciT130I | CCWGG | 2 cut(s) | 860, 996 |
| BclI | TGATCA | 4 cut(s) | 261, 342, 1006, 1609 |
| BcnI | CCSGG | 2 cut(s) | 608, 1096 |
| BcoDI | GTCTC | 8 cut(s) | 518, 523, 530, 946, 1066, 1225, 1490, 1580 |
| BcuI | ACTAGT | 1 cut(s) | 431 |
| BfaI | CTAG | 4 cut(s) | 432, 702, 717, 1680 |
| BfmI | CTRYAG | 1 cut(s) | 579 |
| BisI | GCNGC | 5 cut(s) | 381, 807, 1176, 1380, 1452 |
| BlsI | GCNGC | 5 cut(s) | 382, 808, 1177, 1381, 1453 |
| Bme1390I | CCNGG | 4 cut(s) | 608, 860, 996, 1096 |
| Bme18I | GGWCC | 8 cut(s) | 184, 209, 290, 512, 531, 795, 832, 1281 |
| BmeT110I | CYCGRG | 1 cut(s) | 122 |
| BmgT120I | GGNCC | 9 cut(s) | 125, 184, 209, 290, 512, 531, 795, 832, 1281 |
| BmiI | GGNNCC | 8 cut(s) | 186, 210, 291, 292, 796, 797, 834, 847 |
| BmrFI | CCNGG | 4 cut(s) | 608, 860, 996, 1096 |
| BmsI | GCATC | 2 cut(s) | 584, 1051 |
| BpiI | GAAGAC | 1 cut(s) | 1308 |
| BpmI | CTGGAG | 1 cut(s) | 1730 |
| Bpu14I | TTCGAA | 1 cut(s) | 730 |
| BpuEI | CTTGAG | 1 cut(s) | 1472 |
| BpuMI | CCSGG | 2 cut(s) | 608, 1096 |
| BsaBI | GATNNNNATC | 1 cut(s) | 602 |
| BsaHI | GRCGYC | 1 cut(s) | 70 |
| BsaI | GGTCTC | 2 cut(s) | 523, 1580 |
| BsaJI | CCNNGG | 7 cut(s) | 241, 322, 858, 907, 1095, 1348, 1701 |
| BsaWI | WCCGGW | 2 cut(s) | 181, 514 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 842, 859, 865, 1702 |
| Bse118I | RCCGGY | 2 cut(s) | 514, 869 |
| Bse1I | ACTGG | 3 cut(s) | 968, 1296, 1713 |
| Bse3DI | GCAATG | 1 cut(s) | 384 |
| Bse8I | GATNNNNATC | 1 cut(s) | 602 |
| BseAI | TCCGGA | 1 cut(s) | 181 |
| BseBI | CCWGG | 2 cut(s) | 860, 996 |
| BseDI | CCNNGG | 7 cut(s) | 241, 322, 858, 907, 1095, 1348, 1701 |
| BseGI | GGATG | 6 cut(s) | 514, 849, 1045, 1327, 1573, 1678 |
| BseJI | GATNNNNATC | 1 cut(s) | 602 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 842, 859, 865, 1702 |
| BseMI | GCAATG | 1 cut(s) | 384 |
| BseMII | CTCAG | 8 cut(s) | 513, 921, 1218, 1495, 1518, 1539, 1565, 1623 |
| BseNI | ACTGG | 3 cut(s) | 968, 1296, 1713 |
| BseRI | GAGGAG | 3 cut(s) | 19, 1415, 1727 |
| BseXI | GCAGC | 5 cut(s) | 367, 793, 1187, 1366, 1463 |
| BseYI | CCCAGC | 2 cut(s) | 791, 881 |
| BsgI | GTGCAG | 1 cut(s) | 1576 |
| BshFI | GGCC | 3 cut(s) | 127, 869, 1094 |
| BshTI | ACCGGT | 1 cut(s) | 514 |
| BsiHKAI | GWGCWC | 1 cut(s) | 905 |
| BsiHKCI | CYCGRG | 1 cut(s) | 122 |
| BsiSI | CCGG | 6 cut(s) | 182, 467, 515, 608, 870, 1095 |
| BslFI | GGGAC | 3 cut(s) | 222, 303, 781 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 842, 859, 865, 1702 |
| BsmAI | GTCTC | 8 cut(s) | 518, 523, 530, 946, 1066, 1225, 1490, 1580 |
| BsmFI | GGGAC | 3 cut(s) | 222, 303, 781 |
| BsmI | GAATGC | 1 cut(s) | 760 |
| BsnI | GGCC | 3 cut(s) | 127, 869, 1094 |
| Bso31I | GGTCTC | 2 cut(s) | 523, 1580 |
| BsoBI | CYCGRG | 1 cut(s) | 122 |
| Bsp119I | TTCGAA | 1 cut(s) | 730 |
| Bsp1286I | GDGCHC | 1 cut(s) | 905 |
| Bsp13I | TCCGGA | 1 cut(s) | 181 |
| Bsp19I | CCATGG | 2 cut(s) | 907, 1348 |
| BspACI | CCGC | 8 cut(s) | 138, 201, 232, 282, 313, 863, 1594, 1729 |
| BspANI | GGCC | 3 cut(s) | 127, 869, 1094 |
| BspCNI | CTCAG | 8 cut(s) | 514, 922, 1217, 1494, 1519, 1540, 1566, 1624 |
| BspEI | TCCGGA | 1 cut(s) | 181 |
| BspHI | TCATGA | 1 cut(s) | 1354 |
| BspLI | GGNNCC | 8 cut(s) | 186, 210, 291, 292, 796, 797, 834, 847 |
| BspMAI | CTGCAG | 1 cut(s) | 583 |
| BspPI | GGATC | 5 cut(s) | 105, 840, 853, 960, 1208 |
| BspQI | GCTCTTC | 1 cut(s) | 893 |
| BspT104I | TTCGAA | 1 cut(s) | 730 |
| BspTNI | GGTCTC | 2 cut(s) | 523, 1580 |
| BsrDI | GCAATG | 1 cut(s) | 384 |
| BsrFI | RCCGGY | 2 cut(s) | 514, 869 |
| BsrI | ACTGG | 3 cut(s) | 968, 1296, 1713 |
| BssAI | RCCGGY | 2 cut(s) | 514, 869 |
| BssECI | CCNNGG | 7 cut(s) | 241, 322, 858, 907, 1095, 1348, 1701 |
| BssNI | GRCGYC | 1 cut(s) | 70 |
| BssSI | CACGAG | 1 cut(s) | 452 |
| BssT1I | CCWWGG | 5 cut(s) | 241, 322, 907, 1348, 1701 |
| Bst2BI | CACGAG | 1 cut(s) | 452 |
| Bst2UI | CCWGG | 2 cut(s) | 860, 996 |
| Bst4CI | ACNGT | 4 cut(s) | 370, 646, 1131, 1463 |
| Bst6I | CTCTTC | 5 cut(s) | 41, 58, 893, 1392, 1488 |
| BstACI | GRCGYC | 1 cut(s) | 70 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 380, 1570 |
| BstBI | TTCGAA | 1 cut(s) | 730 |
| BstC8I | GCNNGC | 3 cut(s) | 280, 1136, 1521 |
| BstDEI | CTNAG | 9 cut(s) | 522, 930, 1204, 1385, 1481, 1527, 1548, 1574, 1632 |
| BstDSI | CCRYGG | 2 cut(s) | 907, 1348 |
| BstEII | GGTNACC | 2 cut(s) | 246, 327 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 863 |
| BstF5I | GGATG | 6 cut(s) | 514, 849, 1045, 1327, 1573, 1678 |
| BstHHI | GCGC | 1 cut(s) | 973 |
| BstMAI | GTCTC | 8 cut(s) | 518, 523, 530, 946, 1066, 1225, 1490, 1580 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 380, 386, 1175, 1181, 1376, 1570 |
| BstNI | CCWGG | 2 cut(s) | 860, 996 |
| BstNSI | RCATGY | 1 cut(s) | 446 |
| BstPI | GGTNACC | 2 cut(s) | 246, 327 |
| BstSCI | CCNGG | 4 cut(s) | 606, 858, 994, 1094 |
| BstSFI | CTRYAG | 1 cut(s) | 579 |
| BstV1I | GCAGC | 5 cut(s) | 367, 793, 1187, 1366, 1463 |
| BstV2I | GAAGAC | 1 cut(s) | 1308 |
| BstX2I | RGATCY | 3 cut(s) | 845, 952, 1200 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1708 |
| BstYI | RGATCY | 3 cut(s) | 845, 952, 1200 |
| BsuRI | GGCC | 3 cut(s) | 127, 869, 1094 |
| BtgI | CCRYGG | 2 cut(s) | 907, 1348 |
| BtsCI | GGATG | 6 cut(s) | 514, 849, 1045, 1327, 1573, 1678 |
| BtsI | GCAGTG | 3 cut(s) | 381, 588, 1185 |
| BtsIMutI | CAGTG | 5 cut(s) | 369, 381, 588, 1136, 1185 |
| Cac8I | GCNNGC | 3 cut(s) | 280, 1136, 1521 |
| CaiI | CAGNNNCTG | 3 cut(s) | 380, 578, 955 |
| CciI | TCATGA | 1 cut(s) | 1354 |
| CfoI | GCGC | 1 cut(s) | 973 |
| Cfr10I | RCCGGY | 2 cut(s) | 514, 869 |
| Cfr13I | GGNCC | 9 cut(s) | 125, 184, 209, 290, 512, 531, 795, 832, 1281 |
| CseI | GACGC | 1 cut(s) | 1512 |
| Csp6I | GTAC | 2 cut(s) | 699, 1706 |
| CspAI | ACCGGT | 1 cut(s) | 514 |
| CviAII | CATG | 7 cut(s) | 18, 171, 443, 908, 1349, 1355, 1376 |
| CviQI | GTAC | 2 cut(s) | 699, 1706 |
| DdeI | CTNAG | 9 cut(s) | 522, 930, 1204, 1385, 1481, 1527, 1548, 1574, 1632 |
| DraI | TTTAAA | 1 cut(s) | 1440 |
| EaeI | YGGCCR | 1 cut(s) | 1092 |
| Eam1104I | CTCTTC | 5 cut(s) | 41, 58, 893, 1392, 1488 |
| EarI | CTCTTC | 5 cut(s) | 41, 58, 893, 1392, 1488 |
| EciI | GGCGGA | 2 cut(s) | 878, 1744 |
| Ecl136II | GAGCTC | 1 cut(s) | 903 |
| Eco130I | CCWWGG | 5 cut(s) | 241, 322, 907, 1348, 1701 |
| Eco24I | GRGCYC | 1 cut(s) | 905 |
| Eco31I | GGTCTC | 2 cut(s) | 523, 1580 |
| Eco32I | GATATC | 1 cut(s) | 1014 |
| Eco47I | GGWCC | 8 cut(s) | 184, 209, 290, 512, 531, 795, 832, 1281 |
| Eco53kI | GAGCTC | 1 cut(s) | 903 |
| Eco57I | CTGAAG | 5 cut(s) | 345, 555, 680, 1050, 1256 |
| Eco88I | CYCGRG | 1 cut(s) | 122 |
| Eco91I | GGTNACC | 2 cut(s) | 246, 327 |
| EcoICRI | GAGCTC | 1 cut(s) | 903 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 863 |
| EcoO109I | RGGNCCY | 4 cut(s) | 209, 290, 795, 832 |
| EcoO65I | GGTNACC | 2 cut(s) | 246, 327 |
| EcoRI | GAATTC | 1 cut(s) | 1650 |
| EcoRII | CCWGG | 2 cut(s) | 858, 994 |
| EcoRV | GATATC | 1 cut(s) | 1014 |
| EcoT14I | CCWWGG | 5 cut(s) | 241, 322, 907, 1348, 1701 |
| EcoT38I | GRGCYC | 1 cut(s) | 905 |
| ErhI | CCWWGG | 5 cut(s) | 241, 322, 907, 1348, 1701 |
| FaeI | CATG | 7 cut(s) | 21, 174, 446, 911, 1352, 1358, 1379 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 553, 585 |
| FaqI | GGGAC | 3 cut(s) | 222, 303, 781 |
| FatI | CATG | 7 cut(s) | 17, 170, 442, 907, 1348, 1354, 1375 |
| FauI | CCCGC | 1 cut(s) | 1587 |
| FbaI | TGATCA | 4 cut(s) | 261, 342, 1006, 1609 |
| Fnu4HI | GCNGC | 5 cut(s) | 381, 807, 1176, 1380, 1452 |
| FokI | GGATG | 6 cut(s) | 521, 836, 1052, 1334, 1580, 1685 |
| FriOI | GRGCYC | 1 cut(s) | 905 |
| Fsp4HI | GCNGC | 5 cut(s) | 381, 807, 1176, 1380, 1452 |
| FspBI | CTAG | 4 cut(s) | 432, 702, 717, 1680 |
| GlaI | GCGC | 1 cut(s) | 972 |
| GluI | GCNGC | 5 cut(s) | 381, 807, 1176, 1380, 1452 |
| GsaI | CCCAGC | 2 cut(s) | 795, 885 |
| GsuI | CTGGAG | 1 cut(s) | 1730 |
| HaeIII | GGCC | 3 cut(s) | 127, 869, 1094 |
| HapII | CCGG | 6 cut(s) | 182, 467, 515, 608, 870, 1095 |
| HgaI | GACGC | 1 cut(s) | 1512 |
| HhaI | GCGC | 1 cut(s) | 973 |
| Hin1I | GRCGYC | 1 cut(s) | 70 |
| Hin1II | CATG | 7 cut(s) | 21, 174, 446, 911, 1352, 1358, 1379 |
| Hin6I | GCGC | 1 cut(s) | 971 |
| HinP1I | GCGC | 1 cut(s) | 971 |
| HindIII | AAGCTT | 3 cut(s) | 636, 1517, 1746 |
| HinfI | GANTC | 1 cut(s) | 620 |
| HpaII | CCGG | 6 cut(s) | 182, 467, 515, 608, 870, 1095 |
| HphI | GGTGA | 2 cut(s) | 885, 984 |
| Hpy166II | GTNNAC | 1 cut(s) | 699 |
| Hpy188III | TCNNGA | 6 cut(s) | 182, 452, 945, 1058, 1355, 1415 |
| Hpy8I | GTNNAC | 1 cut(s) | 699 |
| Hpy99I | CGWCG | 3 cut(s) | 72, 75, 299 |
| HpyAV | CCTTC | 9 cut(s) | 67, 71, 699, 1167, 1231, 1252, 1360, 1441, 1719 |
| HpyCH4III | ACNGT | 4 cut(s) | 370, 646, 1131, 1463 |
| HpyCH4IV | ACGT | 1 cut(s) | 70 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 380, 386, 1175, 1181, 1376, 1570 |
| HpyF3I | CTNAG | 9 cut(s) | 522, 930, 1204, 1385, 1481, 1527, 1548, 1574, 1632 |
| HpySE526I | ACGT | 1 cut(s) | 70 |
| Hsp92I | GRCGYC | 1 cut(s) | 70 |
| Hsp92II | CATG | 7 cut(s) | 21, 174, 446, 911, 1352, 1358, 1379 |
| HspAI | GCGC | 1 cut(s) | 971 |
| KflI | GGGWCCC | 2 cut(s) | 290, 795 |
| Kpn2I | TCCGGA | 1 cut(s) | 181 |
| Ksp22I | TGATCA | 4 cut(s) | 261, 342, 1006, 1609 |
| LguI | GCTCTTC | 1 cut(s) | 893 |
| LmnI | GCTCC | 2 cut(s) | 494, 908 |
| Lsp1109I | GCAGC | 5 cut(s) | 367, 793, 1187, 1366, 1463 |
| LweI | GCATC | 2 cut(s) | 584, 1051 |
| MaeI | CTAG | 4 cut(s) | 432, 702, 717, 1680 |
| MaeII | ACGT | 1 cut(s) | 70 |
| MaeIII | GTNAC | 4 cut(s) | 246, 327, 364, 1287 |
| MflI | RGATCY | 3 cut(s) | 845, 952, 1200 |
| MhlI | GDGCHC | 1 cut(s) | 905 |
| MluCI | AATT | 8 cut(s) | 692, 887, 1002, 1212, 1390, 1407, 1472, 1650 |
| MroI | TCCGGA | 1 cut(s) | 181 |
| MseI | TTAA | 4 cut(s) | 417, 602, 1439, 1656 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1353 |
| MspI | CCGG | 6 cut(s) | 182, 467, 515, 608, 870, 1095 |
| MspR9I | CCNGG | 4 cut(s) | 608, 860, 996, 1096 |
| Mva1269I | GAATGC | 1 cut(s) | 760 |
| MvaI | CCWGG | 2 cut(s) | 860, 996 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 380, 386, 1175, 1181, 1376, 1570 |
| NciI | CCSGG | 2 cut(s) | 608, 1096 |
| NcoI | CCATGG | 2 cut(s) | 907, 1348 |
| NlaIII | CATG | 7 cut(s) | 21, 174, 446, 911, 1352, 1358, 1379 |
| NlaIV | GGNNCC | 8 cut(s) | 186, 210, 291, 292, 796, 797, 834, 847 |
| NmeAIII | GCCGAG | 1 cut(s) | 1456 |
| NmuCI | GTSAC | 1 cut(s) | 364 |
| NspI | RCATGY | 1 cut(s) | 446 |
| NspV | TTCGAA | 1 cut(s) | 730 |
| PagI | TCATGA | 1 cut(s) | 1354 |
| PciSI | GCTCTTC | 1 cut(s) | 893 |
| PctI | GAATGC | 1 cut(s) | 760 |
| PfeI | GAWTC | 1 cut(s) | 620 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 859 |
| PinAI | ACCGGT | 1 cut(s) | 514 |
| PkrI | GCNGC | 5 cut(s) | 382, 808, 1177, 1381, 1453 |
| PpuMI | RGGWCCY | 4 cut(s) | 209, 290, 795, 832 |
| Psp124BI | GAGCTC | 1 cut(s) | 905 |
| Psp5II | RGGWCCY | 4 cut(s) | 209, 290, 795, 832 |
| Psp6I | CCWGG | 2 cut(s) | 858, 994 |
| PspEI | GGTNACC | 2 cut(s) | 246, 327 |
| PspFI | CCCAGC | 2 cut(s) | 791, 881 |
| PspGI | CCWGG | 2 cut(s) | 858, 994 |
| PspN4I | GGNNCC | 8 cut(s) | 186, 210, 291, 292, 796, 797, 834, 847 |
| PspPI | GGNCC | 9 cut(s) | 125, 184, 209, 290, 512, 531, 795, 832, 1281 |
| PspPPI | RGGWCCY | 4 cut(s) | 209, 290, 795, 832 |
| PstI | CTGCAG | 1 cut(s) | 583 |
| PstNI | CAGNNNCTG | 3 cut(s) | 380, 578, 955 |
| PsuI | RGATCY | 3 cut(s) | 845, 952, 1200 |
| RsaI | GTAC | 2 cut(s) | 700, 1707 |
| RsaNI | GTAC | 2 cut(s) | 699, 1706 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1353 |
| SacI | GAGCTC | 1 cut(s) | 905 |
| SapI | GCTCTTC | 1 cut(s) | 893 |
| SaqAI | TTAA | 4 cut(s) | 417, 602, 1439, 1656 |
| SatI | GCNGC | 5 cut(s) | 381, 807, 1176, 1380, 1452 |
| Sau96I | GGNCC | 9 cut(s) | 125, 184, 209, 290, 512, 531, 795, 832, 1281 |
| ScrFI | CCNGG | 4 cut(s) | 608, 860, 996, 1096 |
| SduI | GDGCHC | 1 cut(s) | 905 |
| SfaNI | GCATC | 2 cut(s) | 584, 1051 |
| SfcI | CTRYAG | 1 cut(s) | 579 |
| SfuI | TTCGAA | 1 cut(s) | 730 |
| SinI | GGWCC | 8 cut(s) | 184, 209, 290, 512, 531, 795, 832, 1281 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1353 |
| SmlI | CTYRAG | 1 cut(s) | 1487 |
| SmoI | CTYRAG | 1 cut(s) | 1487 |
| SpeI | ACTAGT | 1 cut(s) | 431 |
| Sse9I | AATT | 8 cut(s) | 692, 887, 1002, 1212, 1390, 1407, 1472, 1650 |
| SsiI | CCGC | 8 cut(s) | 138, 201, 232, 282, 313, 863, 1594, 1729 |
| SspMI | CTAG | 4 cut(s) | 432, 702, 717, 1680 |
| SstI | GAGCTC | 1 cut(s) | 905 |
| StyD4I | CCNGG | 4 cut(s) | 606, 858, 994, 1094 |
| StyI | CCWWGG | 5 cut(s) | 241, 322, 907, 1348, 1701 |
| TaaI | ACNGT | 4 cut(s) | 370, 646, 1131, 1463 |
| TaiI | ACGT | 1 cut(s) | 73 |
| TaqI | TCGA | 6 cut(s) | 109, 162, 216, 297, 730, 946 |
| TaqII | GACCGA | 1 cut(s) | 548 |
| TasI | AATT | 8 cut(s) | 692, 887, 1002, 1212, 1390, 1407, 1472, 1650 |
| TatI | WGTACW | 1 cut(s) | 698 |
| TfiI | GAWTC | 1 cut(s) | 620 |
| Tru1I | TTAA | 4 cut(s) | 417, 602, 1439, 1656 |
| Tru9I | TTAA | 4 cut(s) | 417, 602, 1439, 1656 |
| TscAI | CASTG | 5 cut(s) | 369, 381, 588, 1136, 1185 |
| TseFI | GTSAC | 1 cut(s) | 364 |
| TseI | GCWGC | 5 cut(s) | 380, 806, 1175, 1379, 1451 |
| Tsp45I | GTSAC | 1 cut(s) | 364 |
| TspDTI | ATGAA | 4 cut(s) | 132, 159, 705, 1689 |
| TspGWI | ACGGA | 1 cut(s) | 426 |
| TspRI | CASTG | 5 cut(s) | 369, 381, 588, 1136, 1185 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 859 |
| VpaK11BI | GGWCC | 8 cut(s) | 184, 209, 290, 512, 531, 795, 832, 1281 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 863 |
| XapI | RAATTY | 1 cut(s) | 1650 |
| XceI | RCATGY | 1 cut(s) | 446 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 856 |
| XspI | CTAG | 4 cut(s) | 432, 702, 717, 1680 |
| ZraI | GACGTC | 1 cut(s) | 71 |