Rorug04G0291100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0009619
Physical Location & Seq
Forward (+)
46518876 .. 46521085
2210 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0291100.1

Sequence Viewer

Length: 2031 bp
ATGTATCTGAAAGAAGGATGCTCCTTACTGCTAAAACTTCACAAACCCACAAGACCCTTTGTGCTCAGCACAAACCCAGTTCCCAGCTTAAACCCTAAACCCCGAATTGAACCCACCCAAATTCTCAAAGAGTCTGATGTGTTGCAGAGGTTGAAGCATGAGCCCCAATTGGGTTTGGCATTGGAATATTTCAGGTCCATTGCCAACTCCAGAGCTTTCAAACACACCCAATTGACCTACCAGGCCATGATTGAGAAGCTTGGGAGCCAATGTGAAATGGATGGTGTGCAGTACTTGATGCACCAAATGAAATTGGAGGGGGTTGGTTGCTCTGAGGAGTTGTTTATAAGTGTGGTGAAGTCTTACAGGCGAGCAGGGTTGGCTGAGCAGGCATTGAAGATGTTCTATAGGATAAACGAATTCGGGTGCAAACCCACTGTGAAGATTTACAATCACTTGTTGGATGCATTGCTTTGCGAGAATAGGTTTCAGATGATAAATCCCATATATGGTAACATGAAGAAAGATGGGATGGAGCCGAATGTGTTTACGTATAACATTCTGTTGAAGGCATTGTGTAAGAATGATAGGGTGGATGGTGCACACAAGTTGCTTGTGGAAATGTCTAAGAAGGGATGTTGTCCTGACTCGGTGAGCTATACGACTGTAGTGTCTGCATTGTGTAGGCTTGGGAAGGTAGATGAAGCGAGGGAGCTTGCTTGTAGATTCGAACCCAATGTGGCTGTTTATAATGCTTTGGTAAATGGGTTGTGCAAGGAGTCCAAATTTGAAGAGGCATTGGCATTGCTGGTTGAAATGGCGGTTATGGCGAAAATGTTTGTGAGGGGATGTAGGCCTAACATTCACACCTTTACTTCCTTGATGAAGGGTTATTTTATGGAAGGCAGAGTTAGTGAAGCCCTGGACTTGTGGAACCGCATGGTTCGTGAGGGATTTGGGCCCAATGTTGTTACATATACAACTGTTATACACGGTCTCTGCTCTGTTGGGAATATGCACGAAGCTGTATCTGTTTTACATGAGATGGAGAGAAAAGGTTGCTCTCCAAATGTGAGCACATATAGCACTCTTATTGATGGGTTTGCAAAAGCTGGCAACCTTGTTGGTGCATCGGAGACTTGGAACAATATGATGAGCCGTGGTTGCTGTCCTAATGTCATAGCATATACCTGTATGGTGGATGTTCTGTGCAGGAAATATATGTTTCATCGAGCTCAATGTCTTGTAGAAAATATGACTGCCGAAGGCTGTCCACCAAATACAGTTACGTTTAACACATTTATCAAAGGGTTGTGTGAAGATGGAGAAGTAGATTGGGCTGTTAAGGTGCTCAACAAGATGAGGGAAAATGGGTGTTTGCCTAATATTACGACATATAATGAGTTACTGGATGGTCTGTTCAAGGTGAACAGATTCGAAGAAGCATTTGGACTTGTCAAGGAGATAGATGAAAAGGGACTGAAACTGAATTTGGTAACATACAACACCATTTTGAATGGTTTTTGTCGCGCTGGGATGACCAAAGAGGCTATGCAGGTCTTTAGCAACATGCTAACACGTGGAATAAAGCCTGATGCCATTACATATAACATACTGATATATTTCTATTGCAAGCAAGGCAGGATAAAGACTGCTACTCAGCTTTTCAACAGCACTGGTGGAGCAAAGGAGTGGTGCCCGGATGTAATAGCTTATACTAGTCTTCTATGGGGGATTTGTAACTCGGTAGGTCTAGATGAGGCCCTGGTTCATCTTGATAAGATGATAAGGAAAGGTATCTGCCCCAACATTGGCACATGGGATGTGTTGGTGCGGTGCTTCTTTAGCAGCTTAGGTCATTTGGGGCCAATCTACATACTGGATGATATTCTTCGTGAAGATGCTAATCTTAACATAAGCGTCTGCCGTGACATCCTGTTTGCTTTCCTATGCCATGAGCAAGCCCGAGGACTAATAGCACGGTATAACACTGAACAGCATAAGGGCGCAAAGGCCGGTGCACCAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SLH

Protein Analysis

676

Amino Acids

75.95

Weight (kDa)

8.36

Isoelectric Point (pI)

30.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 145 - 194 1.2e-13 PPR repeat family
PPR_3 PF13812 149 - 194 2.5e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 176 - 209 8.3e-12 PPR repeat
PPR_2 PF13041 182 - 229 2.1e-16 PPR repeat family
PPR PF01535 183 - 213 3.2e-07 PPR repeat
PPR_1 PF12854 211 - 239 7.4e-10 PPR repeat
PPR_1 PF12854 243 - 273 1.4e-08 PPR repeat
PPR_2 PF13041 245 - 298 3.2e-11 PPR repeat family
PPR_long PF17177 249 - 373 2.3e-07 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 282 - 315 6.4e-08 PPR repeat
PPR_2 PF13041 286 - 334 9.8e-17 PPR repeat family
PPR PF01535 290 - 319 4.2e-07 PPR repeat
PPR_3 PF13812 312 - 366 2.7e-14 Pentatricopeptide repeat domain
PPR_1 PF12854 318 - 350 2.5e-12 PPR repeat
PPR_2 PF13041 321 - 370 1.7e-20 PPR repeat family
PPR PF01535 324 - 354 3.5e-09 PPR repeat
PPR_3 PF13812 344 - 402 1.5e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 352 - 384 2.2e-09 PPR repeat
PPR_2 PF13041 360 - 405 4.1e-11 PPR repeat family
PPR_long PF17177 379 - 470 1.7e-06 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 391 - 439 7.4e-13 PPR repeat family
PPR_3 PF13812 415 - 470 9.1e-11 Pentatricopeptide repeat domain
TPR_24 PF23276 420 - 523 1e-07 Fungal tetratrico peptide repeats
PPR_1 PF12854 423 - 455 4.8e-14 PPR repeat
PPR_2 PF13041 426 - 475 5.7e-16 PPR repeat family
PPR PF01535 429 - 459 3.4e-07 PPR repeat
PPR_long PF17177 448 - 549 5.2e-08 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 457 - 488 7e-06 PPR repeat
PPR_2 PF13041 461 - 510 1.9e-14 PPR repeat family
PPR_3 PF13812 485 - 543 1.2e-13 Pentatricopeptide repeat domain
PPR_1 PF12854 492 - 524 5.8e-13 PPR repeat
PPR_2 PF13041 497 - 545 8.7e-18 PPR repeat family
PPR PF01535 499 - 529 1.4e-08 PPR repeat
PPR_1 PF12854 527 - 557 1.3e-10 PPR repeat
PPR_2 PF13041 567 - 614 5.5e-07 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 347, 750
AasI GACNNNNNNGTC 1 cut(s) 670
Acc36I ACCTGC 1 cut(s) 1546
AccB1I GGYRCC 1 cut(s) 1695
AccII CGCG 1 cut(s) 1530
AciI CCGC 3 cut(s) 821, 937, 1834
AcsI RAATTY 4 cut(s) 120, 419, 785, 1489
AcvI CACGTG 1 cut(s) 1580
AfaI GTAC 1 cut(s) 293
AfiI CCNNNNNNNGG 3 cut(s) 170, 509, 1811
AflIII ACRYGT 1 cut(s) 1577
AhlI ACTAGT 1 cut(s) 1718
AjnI CCWGG 4 cut(s) 240, 921, 1764, 2023
AjuI GAANNNNNNNTTGG 4 cut(s) 1431, 1463, 1475, 1507
AloI GAACNNNNNNTCC 2 cut(s) 1403, 1435
Alw21I GWGCWC 6 cut(s) 66, 604, 1079, 1237, 1353, 2023
Alw26I GTCTC 2 cut(s) 1001, 1130
Alw44I GTGCAC 2 cut(s) 600, 2019
Ama87I CYCGRG 1 cut(s) 1965
AoxI GGCC 6 cut(s) 243, 854, 959, 1761, 1865, 2013
ApaI GGGCCC 1 cut(s) 963
ApaLI GTGCAC 2 cut(s) 600, 2019
ApeKI GCWGC 1 cut(s) 1848
ApoI RAATTY 4 cut(s) 120, 419, 785, 1489
ArsI GACNNNNNNTTYG 2 cut(s) 1922, 1954
Asp700I GAANNNNTTC 2 cut(s) 401, 1433
AspLEI GCGC 2 cut(s) 1532, 2009
AspS9I GGNCC 5 cut(s) 195, 959, 960, 1762, 1865
AsuC2I CCSGG 1 cut(s) 1700
AsuHPI GGTGA 3 cut(s) 367, 664, 1438
AsuII TTCGAA 2 cut(s) 729, 1437
AvaI CYCGRG 1 cut(s) 1965
AvaII GGWCC 1 cut(s) 195
BaeGI GKGCMC 4 cut(s) 604, 963, 1700, 2023
BanI GGYRCC 1 cut(s) 1695
BanII GRGCYC 3 cut(s) 165, 963, 1237
BbrPI CACGTG 1 cut(s) 1580
BbsI GAAGAC 1 cut(s) 1715
Bbv12I GWGCWC 6 cut(s) 66, 604, 1079, 1237, 1353, 2023
BbvI GCAGC 1 cut(s) 1860
BccI CCATC 8 cut(s) 275, 521, 526, 590, 1039, 1091, 1316, 1406
BceAI ACGGC 2 cut(s) 1143, 1911
BciT130I CCWGG 4 cut(s) 242, 923, 1766, 2025
BcnI CCSGG 1 cut(s) 1700
BcoDI GTCTC 2 cut(s) 1001, 1130
BcuI ACTAGT 1 cut(s) 1718
BfaI CTAG 3 cut(s) 1719, 1754, 2029
BfmI CTRYAG 2 cut(s) 406, 666
BfuAI ACCTGC 1 cut(s) 1546
BisI GCNGC 1 cut(s) 1849
BlpI GCTNAGC 2 cut(s) 65, 384
BlsI GCNGC 1 cut(s) 1850
BmcAI AGTACT 1 cut(s) 293
Bme1390I CCNGG 5 cut(s) 242, 923, 1700, 1766, 2025
Bme18I GGWCC 1 cut(s) 195
BmeT110I CYCGRG 1 cut(s) 1965
BmgT120I GGNCC 5 cut(s) 195, 959, 960, 1762, 1865
BmiI GGNNCC 6 cut(s) 266, 537, 935, 961, 1697, 1866
BmrFI CCNGG 5 cut(s) 242, 923, 1700, 1766, 2025
BmrI ACTGGG 1 cut(s) 71
BmsI GCATC 6 cut(s) 8, 288, 454, 1139, 1585, 1891
BmuI ACTGGG 1 cut(s) 71
BpiI GAAGAC 1 cut(s) 1715
BpmI CTGGAG 1 cut(s) 193
Bpu10I CCTNAGC 1 cut(s) 1852
Bpu1102I GCTNAGC 2 cut(s) 65, 384
Bpu14I TTCGAA 2 cut(s) 729, 1437
BpuMI CCSGG 1 cut(s) 1700
BsaAI YACGTR 2 cut(s) 552, 1580
BsaBI GATNNNNATC 1 cut(s) 1905
BsaI GGTCTC 1 cut(s) 1001
BsaJI CCNNGG 4 cut(s) 921, 1159, 1764, 1966
BsaXI ACNNNNNCTCC 2 cut(s) 256, 286
Bsc4I CCNNNNNNNGG 3 cut(s) 170, 509, 1811
Bse118I RCCGGY 1 cut(s) 2015
Bse1I ACTGG 4 cut(s) 77, 1413, 1681, 1884
Bse3DI GCAATG 3 cut(s) 198, 467, 803
Bse8I GATNNNNATC 1 cut(s) 1905
BseBI CCWGG 4 cut(s) 242, 923, 1766, 2025
BseDI CCNNGG 4 cut(s) 921, 1159, 1764, 1966
BseJI GATNNNNATC 1 cut(s) 1905
BseLI CCNNNNNNNGG 3 cut(s) 170, 509, 1811
BseMI GCAATG 3 cut(s) 198, 467, 803
BseMII CTCAG 4 cut(s) 79, 324, 375, 1673
BseNI ACTGG 4 cut(s) 77, 1413, 1681, 1884
BseRI GAGGAG 1 cut(s) 350
BseSI GKGCMC 4 cut(s) 604, 963, 1700, 2023
BseXI GCAGC 1 cut(s) 1860
BseYI CCCAGC 2 cut(s) 83, 1532
BsgI GTGCAG 2 cut(s) 308, 1231
Bsh1236I CGCG 1 cut(s) 1530
BshFI GGCC 6 cut(s) 245, 856, 961, 1763, 1867, 2015
BshNI GGYRCC 1 cut(s) 1695
BsiHKAI GWGCWC 6 cut(s) 66, 604, 1079, 1237, 1353, 2023
BsiHKCI CYCGRG 1 cut(s) 1965
BsiSI CCGG 2 cut(s) 1700, 2016
BslFI GGGAC 1 cut(s) 1491
BslI CCNNNNNNNGG 3 cut(s) 170, 509, 1811
BsmAI GTCTC 2 cut(s) 1001, 1130
BsmFI GGGAC 1 cut(s) 1491
BsnI GGCC 6 cut(s) 245, 856, 961, 1763, 1867, 2015
Bso31I GGTCTC 1 cut(s) 1001
BsoBI CYCGRG 1 cut(s) 1965
Bsp119I TTCGAA 2 cut(s) 729, 1437
Bsp120I GGGCCC 1 cut(s) 959
Bsp1286I GDGCHC 9 cut(s) 66, 165, 604, 963, 1079, 1237, 1353, 1700, 2023
Bsp1720I GCTNAGC 2 cut(s) 65, 384
BspACI CCGC 3 cut(s) 821, 937, 1834
BspANI GGCC 6 cut(s) 245, 856, 961, 1763, 1867, 2015
BspCNI CTCAG 4 cut(s) 78, 325, 376, 1672
BspFNI CGCG 1 cut(s) 1530
BspLI GGNNCC 6 cut(s) 266, 537, 935, 961, 1697, 1866
BspMI ACCTGC 1 cut(s) 1546
BspT104I TTCGAA 2 cut(s) 729, 1437
BspT107I GGYRCC 1 cut(s) 1695
BspTNI GGTCTC 1 cut(s) 1001
BsrDI GCAATG 3 cut(s) 198, 467, 803
BsrFI RCCGGY 1 cut(s) 2015
BsrI ACTGG 4 cut(s) 77, 1413, 1681, 1884
BssAI RCCGGY 1 cut(s) 2015
BssECI CCNNGG 4 cut(s) 921, 1159, 1764, 1966
Bst2UI CCWGG 4 cut(s) 242, 923, 1766, 2025
Bst4CI ACNGT 6 cut(s) 439, 667, 985, 995, 1285, 1983
Bst6I CTCTTC 1 cut(s) 786
BstBAI YACGTR 2 cut(s) 552, 1580
BstBI TTCGAA 2 cut(s) 729, 1437
BstC8I GCNNGC 6 cut(s) 372, 390, 717, 1114, 1634, 1962
BstDEI CTNAG 6 cut(s) 65, 333, 384, 627, 1659, 1852
BstDSI CCRYGG 1 cut(s) 1159
BstFNI CGCG 1 cut(s) 1530
BstHHI GCGC 2 cut(s) 1532, 2009
BstMAI GTCTC 2 cut(s) 1001, 1130
BstMWI GCNNNNNNNGC 7 cut(s) 380, 389, 827, 1083, 1164, 1638, 1845
BstNI CCWGG 4 cut(s) 242, 923, 1766, 2025
BstNSI RCATGY 1 cut(s) 1573
BstSCI CCNGG 5 cut(s) 240, 921, 1698, 1764, 2023
BstSFI CTRYAG 2 cut(s) 406, 666
BstSLI GKGCMC 4 cut(s) 604, 963, 1700, 2023
BstSNI TACGTA 1 cut(s) 552
BstUI CGCG 1 cut(s) 1530
BstV1I GCAGC 1 cut(s) 1860
BstV2I GAAGAC 1 cut(s) 1715
BsuRI GGCC 6 cut(s) 245, 856, 961, 1763, 1867, 2015
BtgI CCRYGG 1 cut(s) 1159
BtsIMutI CAGTG 3 cut(s) 435, 1674, 1989
BveI ACCTGC 1 cut(s) 1546
Cac8I GCNNGC 6 cut(s) 372, 390, 717, 1114, 1634, 1962
CfoI GCGC 2 cut(s) 1532, 2009
Cfr10I RCCGGY 1 cut(s) 2015
Cfr13I GGNCC 5 cut(s) 195, 959, 960, 1762, 1865
CseI GACGC 1 cut(s) 1909
Csp6I GTAC 1 cut(s) 292
CviAII CATG 8 cut(s) 158, 247, 517, 940, 1040, 1570, 1818, 1955
CviQI GTAC 1 cut(s) 292
DdeI CTNAG 6 cut(s) 65, 333, 384, 627, 1659, 1852
DrdI GACNNNNNNGTC 1 cut(s) 670
DseDI GACNNNNNNGTC 1 cut(s) 670
Eam1104I CTCTTC 1 cut(s) 786
EarI CTCTTC 1 cut(s) 786
Ecl136II GAGCTC 1 cut(s) 1235
Eco105I TACGTA 1 cut(s) 552
Eco147I AGGCCT 1 cut(s) 856
Eco24I GRGCYC 3 cut(s) 165, 963, 1237
Eco31I GGTCTC 1 cut(s) 1001
Eco47I GGWCC 1 cut(s) 195
Eco53kI GAGCTC 1 cut(s) 1235
Eco72I CACGTG 1 cut(s) 1580
Eco88I CYCGRG 1 cut(s) 1965
EcoICRI GAGCTC 1 cut(s) 1235
EcoO109I RGGNCCY 1 cut(s) 1762
EcoRI GAATTC 1 cut(s) 419
EcoRII CCWGG 4 cut(s) 240, 921, 1764, 2023
EcoT22I ATGCAT 1 cut(s) 469
EcoT38I GRGCYC 3 cut(s) 165, 963, 1237
FaeI CATG 8 cut(s) 161, 250, 520, 943, 1043, 1573, 1821, 1958
FaqI GGGAC 1 cut(s) 1491
FatI CATG 8 cut(s) 157, 246, 516, 939, 1039, 1569, 1817, 1954
Fnu4HI GCNGC 1 cut(s) 1849
FriOI GRGCYC 3 cut(s) 165, 963, 1237
Fsp4HI GCNGC 1 cut(s) 1849
FspBI CTAG 3 cut(s) 1719, 1754, 2029
GlaI GCGC 2 cut(s) 1531, 2008
GluI GCNGC 1 cut(s) 1849
GsaI CCCAGC 2 cut(s) 87, 1536
GsuI CTGGAG 1 cut(s) 193
HaeIII GGCC 6 cut(s) 245, 856, 961, 1763, 1867, 2015
HapII CCGG 2 cut(s) 1700, 2016
HgaI GACGC 1 cut(s) 1909
HhaI GCGC 2 cut(s) 1532, 2009
Hin1II CATG 8 cut(s) 161, 250, 520, 943, 1043, 1573, 1821, 1958
Hin6I GCGC 2 cut(s) 1530, 2007
HinP1I GCGC 2 cut(s) 1530, 2007
HindIII AAGCTT 1 cut(s) 257
HinfI GANTC 5 cut(s) 131, 647, 726, 779, 1434
HpaII CCGG 2 cut(s) 1700, 2016
HphI GGTGA 3 cut(s) 367, 664, 1438
Hpy166II GTNNAC 5 cut(s) 549, 602, 1274, 1429, 2021
Hpy188I TCNGA 5 cut(s) 9, 136, 334, 492, 1135
Hpy188III TCNNGA 6 cut(s) 210, 644, 947, 1754, 1775, 1895
Hpy8I GTNNAC 5 cut(s) 549, 602, 1274, 1429, 2021
HpyAV CCTTC 7 cut(s) 8, 562, 625, 688, 880, 896, 1259
HpyCH4III ACNGT 6 cut(s) 439, 667, 985, 995, 1285, 1983
HpyCH4IV ACGT 3 cut(s) 551, 1289, 1579
HpyF10VI GCNNNNNNNGC 7 cut(s) 380, 389, 827, 1083, 1164, 1638, 1845
HpyF3I CTNAG 6 cut(s) 65, 333, 384, 627, 1659, 1852
HpySE526I ACGT 3 cut(s) 551, 1289, 1579
Hsp92II CATG 8 cut(s) 161, 250, 520, 943, 1043, 1573, 1821, 1958
HspAI GCGC 2 cut(s) 1530, 2007
LmnI GCTCC 5 cut(s) 26, 264, 535, 712, 1682
Lsp1109I GCAGC 1 cut(s) 1860
LweI GCATC 6 cut(s) 8, 288, 454, 1139, 1585, 1891
MaeI CTAG 3 cut(s) 1719, 1754, 2029
MaeII ACGT 3 cut(s) 551, 1289, 1579
MaeIII GTNAC 7 cut(s) 512, 970, 1285, 1404, 1495, 1739, 1928
MboII GAAGA 9 cut(s) 409, 454, 532, 803, 1331, 1451, 1715, 1883, 1910
MfeI CAATTG 2 cut(s) 167, 230
MhlI GDGCHC 9 cut(s) 66, 165, 604, 963, 1079, 1237, 1353, 1700, 2023
MluCI AATT 8 cut(s) 105, 120, 167, 230, 311, 419, 785, 1489
MlyI GAGTC 3 cut(s) 140, 641, 788
MmeI TCCRAC 1 cut(s) 441
Mph1103I ATGCAT 1 cut(s) 469
MroXI GAANNNNTTC 2 cut(s) 401, 1433
MseI TTAA 4 cut(s) 89, 1293, 1344, 1911
MspI CCGG 2 cut(s) 1700, 2016
MspR9I CCNGG 5 cut(s) 242, 923, 1700, 1766, 2025
MunI CAATTG 2 cut(s) 167, 230
MvaI CCWGG 4 cut(s) 242, 923, 1766, 2025
MvnI CGCG 1 cut(s) 1530
MwoI GCNNNNNNNGC 7 cut(s) 380, 389, 827, 1083, 1164, 1638, 1845
NciI CCSGG 1 cut(s) 1700
NlaIII CATG 8 cut(s) 161, 250, 520, 943, 1043, 1573, 1821, 1958
NlaIV GGNNCC 6 cut(s) 266, 537, 935, 961, 1697, 1866
NmuCI GTSAC 1 cut(s) 1928
NsiI ATGCAT 1 cut(s) 469
NspI RCATGY 1 cut(s) 1573
NspV TTCGAA 2 cut(s) 729, 1437
PceI AGGCCT 1 cut(s) 856
PdmI GAANNNNTTC 2 cut(s) 401, 1433
PfeI GAWTC 2 cut(s) 726, 1434
PkrI GCNGC 1 cut(s) 1850
PleI GAGTC 3 cut(s) 139, 641, 787
PmaCI CACGTG 1 cut(s) 1580
PmlI CACGTG 1 cut(s) 1580
PpsI GAGTC 3 cut(s) 139, 641, 787
Ppu21I YACGTR 2 cut(s) 552, 1580
PsiI TTATAA 2 cut(s) 347, 750
Psp124BI GAGCTC 1 cut(s) 1237
Psp6I CCWGG 4 cut(s) 240, 921, 1764, 2023
PspCI CACGTG 1 cut(s) 1580
PspFI CCCAGC 2 cut(s) 83, 1532
PspGI CCWGG 4 cut(s) 240, 921, 1764, 2023
PspN4I GGNNCC 6 cut(s) 266, 537, 935, 961, 1697, 1866
PspOMI GGGCCC 1 cut(s) 959
PspPI GGNCC 5 cut(s) 195, 959, 960, 1762, 1865
RsaI GTAC 1 cut(s) 293
RsaNI GTAC 1 cut(s) 292
SacI GAGCTC 1 cut(s) 1237
SaqAI TTAA 4 cut(s) 89, 1293, 1344, 1911
SatI GCNGC 1 cut(s) 1849
Sau96I GGNCC 5 cut(s) 195, 959, 960, 1762, 1865
ScaI AGTACT 1 cut(s) 293
SchI GAGTC 3 cut(s) 140, 641, 788
ScrFI CCNGG 5 cut(s) 242, 923, 1700, 1766, 2025
SduI GDGCHC 9 cut(s) 66, 165, 604, 963, 1079, 1237, 1353, 1700, 2023
SfaNI GCATC 6 cut(s) 8, 288, 454, 1139, 1585, 1891
SfcI CTRYAG 2 cut(s) 406, 666
SfuI TTCGAA 2 cut(s) 729, 1437
SinI GGWCC 1 cut(s) 195
SnaBI TACGTA 1 cut(s) 552
SpeI ACTAGT 1 cut(s) 1718
Sse9I AATT 8 cut(s) 105, 120, 167, 230, 311, 419, 785, 1489
SseBI AGGCCT 1 cut(s) 856
SsiI CCGC 3 cut(s) 821, 937, 1834
SspI AATATT 2 cut(s) 188, 1387
SspMI CTAG 3 cut(s) 1719, 1754, 2029
SstI GAGCTC 1 cut(s) 1237
StuI AGGCCT 1 cut(s) 856
StyD4I CCNGG 5 cut(s) 240, 921, 1698, 1764, 2023
TaaI ACNGT 6 cut(s) 439, 667, 985, 995, 1285, 1983
TaiI ACGT 3 cut(s) 554, 1292, 1582
TaqI TCGA 3 cut(s) 729, 1231, 1437
TasI AATT 8 cut(s) 105, 120, 167, 230, 311, 419, 785, 1489
TatI WGTACW 1 cut(s) 291
TfiI GAWTC 2 cut(s) 726, 1434
Tru1I TTAA 4 cut(s) 89, 1293, 1344, 1911
Tru9I TTAA 4 cut(s) 89, 1293, 1344, 1911
TscAI CASTG 3 cut(s) 442, 1681, 1996
TseFI GTSAC 1 cut(s) 1928
TseI GCWGC 1 cut(s) 1848
Tsp45I GTSAC 1 cut(s) 1928
TspDTI ATGAA 7 cut(s) 323, 533, 717, 899, 1217, 1485, 1760
TspRI CASTG 3 cut(s) 442, 1681, 1996
VneI GTGCAC 2 cut(s) 600, 2019
VpaK11BI GGWCC 1 cut(s) 195
XapI RAATTY 4 cut(s) 120, 419, 785, 1489
XbaI TCTAGA 1 cut(s) 1753
XceI RCATGY 1 cut(s) 1573
XmnI GAANNNNTTC 2 cut(s) 401, 1433
XspI CTAG 3 cut(s) 1719, 1754, 2029
ZrmI AGTACT 1 cut(s) 293
Zsp2I ATGCAT 1 cut(s) 469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.