Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G09600 AT3G09600 AT3G09600 AT3G09600 AT3G09600 AT3G09600 AT3G09600 AT3G09600 AT3G09600 AT5G02840 AT5G02840 AT5G02840 AT5G02840 AT5G02840 |
| fragaria_vesca | FvH4_6g15160 FvH4_6g15160 FvH4_6g15160 |
| malus_domestica | MD12G1126100.v1.1 |
| prunus_persica | Prupe.6G242700_v2.0.a1 Prupe.6G242700_v2.0.a1 |
| pyrus_communis | pycom04g10070 pycom12g12430 |
| rosa_chinensis | RchiOBHm_Chr3g0468461 |
| rosa_laevigata | RLG00000024427 |
| rosa_multiflora | Rmu_co8188524.1_g000001 Rmu_sc0008735.1_g000004 Rmu_sc0040156.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00412740 |
| rosa_rugosa | Rorug03G0095600 |
| rosa_samantha | Rh3AG143400 Rh3AG143900 Rh3BG165900 Rh3DG165500 |
| rosa_wichuraiana | Rw3G013580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 63 |
| AcyI | GRCGYC | 1 cut(s) | 45 |
| AgsI | TTSAA | 4 cut(s) | 22, 131, 140, 170 |
| AluBI | AGCT | 2 cut(s) | 99, 134 |
| AluI | AGCT | 2 cut(s) | 99, 134 |
| Alw21I | GWGCWC | 1 cut(s) | 117 |
| Aor13HI | TCCGGA | 1 cut(s) | 63 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 135 |
| AspS9I | GGNCC | 1 cut(s) | 61 |
| AsuHPI | GGTGA | 1 cut(s) | 73 |
| AvaII | GGWCC | 1 cut(s) | 61 |
| Bbv12I | GWGCWC | 1 cut(s) | 117 |
| BccI | CCATC | 1 cut(s) | 86 |
| BclI | TGATCA | 1 cut(s) | 3 |
| Bme18I | GGWCC | 1 cut(s) | 61 |
| BmgT120I | GGNCC | 1 cut(s) | 61 |
| BsaHI | GRCGYC | 1 cut(s) | 45 |
| BsaWI | WCCGGW | 2 cut(s) | 50, 63 |
| Bse1I | ACTGG | 1 cut(s) | 161 |
| BseAI | TCCGGA | 1 cut(s) | 63 |
| BseNI | ACTGG | 1 cut(s) | 161 |
| BseRI | GAGGAG | 1 cut(s) | 4 |
| BsiHKAI | GWGCWC | 1 cut(s) | 117 |
| BsiSI | CCGG | 2 cut(s) | 51, 64 |
| Bsp1286I | GDGCHC | 1 cut(s) | 117 |
| Bsp13I | TCCGGA | 1 cut(s) | 63 |
| Bsp143I | GATC | 2 cut(s) | 3, 148 |
| BspEI | TCCGGA | 1 cut(s) | 63 |
| BspQI | GCTCTTC | 2 cut(s) | 105, 141 |
| BsrI | ACTGG | 1 cut(s) | 161 |
| BssMI | GATC | 2 cut(s) | 3, 148 |
| BssNI | GRCGYC | 1 cut(s) | 45 |
| Bst4CI | ACNGT | 2 cut(s) | 144, 193 |
| Bst6I | CTCTTC | 2 cut(s) | 105, 141 |
| BstACI | GRCGYC | 1 cut(s) | 45 |
| BstKTI | GATC | 2 cut(s) | 6, 151 |
| BstMBI | GATC | 2 cut(s) | 3, 148 |
| Cfr13I | GGNCC | 1 cut(s) | 61 |
| CseI | GACGC | 1 cut(s) | 53 |
| CviAII | CATG | 1 cut(s) | 34 |
| CviJI | RGCY | 3 cut(s) | 70, 99, 134 |
| CviKI_1 | RGCY | 3 cut(s) | 70, 99, 134 |
| DpnI | GATC | 2 cut(s) | 5, 150 |
| DpnII | GATC | 2 cut(s) | 3, 148 |
| Eam1104I | CTCTTC | 2 cut(s) | 105, 141 |
| EarI | CTCTTC | 2 cut(s) | 105, 141 |
| Eco47I | GGWCC | 1 cut(s) | 61 |
| FaeI | CATG | 1 cut(s) | 37 |
| FaiI | YATR | 1 cut(s) | 35 |
| FatI | CATG | 1 cut(s) | 33 |
| FbaI | TGATCA | 1 cut(s) | 3 |
| HapII | CCGG | 2 cut(s) | 51, 64 |
| HgaI | GACGC | 1 cut(s) | 53 |
| Hin1I | GRCGYC | 1 cut(s) | 45 |
| Hin1II | CATG | 1 cut(s) | 37 |
| HpaII | CCGG | 2 cut(s) | 51, 64 |
| HphI | GGTGA | 1 cut(s) | 73 |
| Hpy188I | TCNGA | 1 cut(s) | 43 |
| Hpy188III | TCNNGA | 3 cut(s) | 64, 90, 152 |
| Hpy99I | CGWCG | 1 cut(s) | 47 |
| HpyAV | CCTTC | 1 cut(s) | 52 |
| HpyCH4III | ACNGT | 2 cut(s) | 144, 193 |
| Hsp92I | GRCGYC | 1 cut(s) | 45 |
| Hsp92II | CATG | 1 cut(s) | 37 |
| Kpn2I | TCCGGA | 1 cut(s) | 63 |
| Ksp22I | TGATCA | 1 cut(s) | 3 |
| Kzo9I | GATC | 2 cut(s) | 3, 148 |
| LguI | GCTCTTC | 2 cut(s) | 105, 141 |
| LpnPI | CCDG | 6 cut(s) | 64, 77, 85, 103, 142, 185 |
| MaeIII | GTNAC | 1 cut(s) | 152 |
| MalI | GATC | 2 cut(s) | 5, 150 |
| MboI | GATC | 2 cut(s) | 3, 148 |
| MboII | GAAGA | 4 cut(s) | 122, 128, 172, 182 |
| MhlI | GDGCHC | 1 cut(s) | 117 |
| MluCI | AATT | 1 cut(s) | 165 |
| MmeI | TCCRAC | 1 cut(s) | 66 |
| MnlI | CCTC | 5 cut(s) | 22, 25, 49, 58, 100 |
| MroI | TCCGGA | 1 cut(s) | 63 |
| MroXI | GAANNNNTTC | 1 cut(s) | 135 |
| MspI | CCGG | 2 cut(s) | 51, 64 |
| NdeII | GATC | 2 cut(s) | 3, 148 |
| NlaIII | CATG | 1 cut(s) | 37 |
| NmuCI | GTSAC | 1 cut(s) | 152 |
| PciSI | GCTCTTC | 2 cut(s) | 105, 141 |
| PdmI | GAANNNNTTC | 1 cut(s) | 135 |
| PspPI | GGNCC | 1 cut(s) | 61 |
| SapI | GCTCTTC | 2 cut(s) | 105, 141 |
| Sau3AI | GATC | 2 cut(s) | 3, 148 |
| Sau96I | GGNCC | 1 cut(s) | 61 |
| SduI | GDGCHC | 1 cut(s) | 117 |
| SetI | ASST | 4 cut(s) | 63, 101, 136, 204 |
| SinI | GGWCC | 1 cut(s) | 61 |
| Sse9I | AATT | 1 cut(s) | 165 |
| TaaI | ACNGT | 2 cut(s) | 144, 193 |
| TasI | AATT | 1 cut(s) | 165 |
| TseFI | GTSAC | 1 cut(s) | 152 |
| Tsp45I | GTSAC | 1 cut(s) | 152 |
| VpaK11BI | GGWCC | 1 cut(s) | 61 |
| XmnI | GAANNNNTTC | 1 cut(s) | 135 |