Rorug03G0095600
MYB Family

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0003729
Physical Location & Seq
Forward (+)
7469330 .. 7473618
4289 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0095600.1

Sequence Viewer

Length: 1767 bp
ATGATGAACCGGAATGTGAGGGAGTCTCTGGTCGGCGGGAGGAATTTTCCGGCGTCGCAGAACCACCGGCGAGGCGGCAGTTTGAATCTCCCTGCGCTGTCTTCGAGTATGAAGCAGGAGCACCATGACGAGAGCAGTAGCTTGGATCTCTTCTCCAAGAGCCGCCGCACTCTCTCCGTCGCTTCCTCCGATGACTCCTCCGACGTTTCGGTGAAATTGGGGAGACTGTCAGTTGGATCGGGCAAAGTGGGAGGGAGGACTGGGATTGATGATCTGTTGTCATCTGCAGATGGTGGTGGAAAGCATGATTATGACTGGCTTCTCACTCCACCAGAAACTCCACTTTTCCCTTCATCAGATGGAAGTGAATCTCAACCAACCCTAGCTGCTGCAAGAAGCAGTGCTTTAAATCGATCAACTTCCTCAGCCAAGCCTTCAAGGCTTTCAGTTTCACAATCTGAGAGTAACCATTCATCAAGACCAGCTAGAAGCAGTTCAGTGACTCGCTCTTCAATCTCTTCATCACAGTATACCAACTATTCCTCAAACAGATCCTCCAATTTCCTTAACACGAGCTCAGCTTCAGTTTCGTCTTACAGTAGACCATCATCCCCCATTACCCGCTCCCCATCTACGGCAAGACCTTCCACTCCAACCTCTCGCGCATCACTATCAAGACCCTCAACTCCTTCTAGAACCCGTACTGTTCTGACTAGCTCTTCCATTGAGAGACCTCGGTCAGTGGCAAGCTCAAGACCATCCACTCCTAGTTCTAGGCCACAGATTCCTGCAAACTTGAGTTCACCAGCTGCTCGAACACCTTCTCGTCCATCTACCCCCACTCGTCGGCATTCGTTGCCTTCTTTGTCACCAGCATCAAGTCCTTCACCTTCAGCTGGCCGTCTTTCAAATGGGCGCAATCCAGCACCGACATCCCGACCAAGCTCCCCTAGCCCACGTGTCCGCCCCCCACCACAGCCCATTGTTCCACATGATTTTCCTCTTGATACACCGCCAAACCTTAGAACAACCTTACCAGACAGGCCAATTTCTGCTGGTAGGTCTCGGCCTGGTGCTGCTGTAGTAGTGAAGGGAAAATTAGAAACCCCAGCTGCCGTGGTTGTGCCAAGAAGACAGTCATCACCCATTGTTTCAAGGGGAAGACTCACAGAGGCCCCTGGAAGAAGCCGTGTACTTTCTAATGGGCACCATGATGTTCCTGAGCCTAGAAAGGCCCAACATCTCCCTGACCTGGGCATGCGGAAGCCTGTGAAGACTTCATCAACACCAGCTACGGACAACAGTGGATTTGGGAGGAATATCTCGAAGAAATCGCTCGATATGGCAATCCGGCATATGGATATTAAGAATGGAACAGGAAACAGTCGCCAACTTTCAGGCAGCACCCTCTTCCCCCAAAGCATACGGTCTGGAACTCCCAAGACCCAGTCTGTTCGCACATTGAGTTCATCAGCATCAGTGAACATGAATGGAGGCCTGCAATCCAGAAGTAATGGAGTTGTTTACGAGAATGGGAACAACATGAGTAGGCCTGTAGAAAATGGAACTGCAGCAAATGGGGGTGGACGGTATTCTGCAAAACTGACTGATGTGGACATCTATGAGAGCTCTCGCTATGATGCAATATTGCTCAAAGAAGACCTGAAGAATACAAACTGGCTACACAGTTTGGATGATAAATTGGATGAAGGACCCATCTTTGATAATGGATTTGAGCATCTGCCTGAACCTTTCGGCCTCTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000988 GO:0000989 GO:0001076 GO:0001101 GO:0001190 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006325 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007275 GO:0007623 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016043 GO:0016070 GO:0016569 GO:0016570 GO:0016573 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032774 GO:0032922 GO:0033993 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0042221 GO:0042493 GO:0042752 GO:0042753 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043543 GO:0043565 GO:0043966 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0046677 GO:0046686 GO:0048511 GO:0048518 GO:0048522 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097305 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

588

Amino Acids

62.56

Weight (kDa)

11.08

Isoelectric Point (pI)

74.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1765
AccB1I GGYRCC 1 cut(s) 1206
AccBSI CCGCTC 1 cut(s) 624
AccI GTMKAC 2 cut(s) 530, 601
AccII CGCG 1 cut(s) 663
AciI CCGC 8 cut(s) 36, 75, 163, 166, 622, 964, 1013, 1261
AclWI GGATC 3 cut(s) 153, 244, 546
AcoI YGGCCR 1 cut(s) 898
AcsI RAATTY 1 cut(s) 43
AcuI CTGAAG 3 cut(s) 567, 876, 1685
AcvI CACGTG 1 cut(s) 959
AcyI GRCGYC 1 cut(s) 53
AfaI GTAC 2 cut(s) 703, 1194
AfiI CCNNNNNNNGG 6 cut(s) 634, 846, 896, 1252, 1253, 1357
AflIII ACRYGT 1 cut(s) 958
AgsI TTSAA 5 cut(s) 85, 438, 513, 909, 1155
AjnI CCWGG 3 cut(s) 1069, 1177, 1251
Alw21I GWGCWC 3 cut(s) 123, 578, 1631
Alw26I GTCTC 4 cut(s) 30, 217, 724, 1068
AlwI GGATC 3 cut(s) 153, 244, 546
AoxI GGCC 9 cut(s) 776, 898, 1043, 1067, 1173, 1233, 1495, 1550, 1756
ApeKI GCWGC 7 cut(s) 386, 389, 809, 1076, 1112, 1401, 1571
ApoI RAATTY 1 cut(s) 43
Asp700I GAANNNNTTC 2 cut(s) 493, 820
AspLEI GCGC 3 cut(s) 97, 665, 918
AspS9I GGNCC 3 cut(s) 1174, 1234, 1712
AsuHPI GGTGA 5 cut(s) 223, 795, 861, 879, 1134
AvaII GGWCC 1 cut(s) 1712
BaeGI GKGCMC 1 cut(s) 1209
BanI GGYRCC 1 cut(s) 1206
BanII GRGCYC 2 cut(s) 578, 1631
BauI CACGAG 1 cut(s) 571
BbrPI CACGTG 1 cut(s) 959
BbsI GAAGAC 5 cut(s) 93, 1138, 1168, 1280, 1665
Bbv12I GWGCWC 3 cut(s) 123, 578, 1631
BbvCI CCTCAGC 1 cut(s) 424
BbvI GCAGC 7 cut(s) 373, 376, 796, 1063, 1099, 1413, 1583
BccI CCATC 7 cut(s) 284, 353, 613, 637, 766, 838, 1724
BceAI ACGGC 4 cut(s) 651, 885, 1100, 1173
BciT130I CCWGG 3 cut(s) 1071, 1179, 1253
BcoDI GTCTC 4 cut(s) 30, 217, 724, 1068
BfaI CTAG 8 cut(s) 383, 486, 693, 714, 768, 774, 951, 1227
BfmI CTRYAG 4 cut(s) 285, 1080, 1554, 1569
BglI GCCNNNNNGGC 1 cut(s) 439
BlpI GCTNAGC 1 cut(s) 577
Bme1390I CCNGG 3 cut(s) 1071, 1179, 1253
Bme18I GGWCC 1 cut(s) 1712
BmgT120I GGNCC 3 cut(s) 1174, 1234, 1712
BmiI GGNNCC 3 cut(s) 1176, 1208, 1714
BmrFI CCNGG 3 cut(s) 1071, 1179, 1253
BmrI ACTGGG 2 cut(s) 270, 1441
BmsI GCATC 5 cut(s) 674, 884, 1484, 1630, 1747
BmuI ACTGGG 2 cut(s) 270, 1441
BoxI GACNNNNGTC 1 cut(s) 736
BpiI GAAGAC 5 cut(s) 93, 1138, 1168, 1280, 1665
BplI GAGNNNNNCTC 2 cut(s) 10, 42
Bpu10I CCTNAGC 2 cut(s) 424, 1221
Bpu1102I GCTNAGC 1 cut(s) 577
BpuEI CTTGAG 2 cut(s) 736, 817
Bsa29I ATCGAT 1 cut(s) 412
BsaAI YACGTR 1 cut(s) 959
BsaHI GRCGYC 1 cut(s) 53
BsaI GGTCTC 2 cut(s) 724, 1068
BsaJI CCNNGG 4 cut(s) 734, 1116, 1177, 1252
BsaWI WCCGGW 1 cut(s) 9
BsaXI ACNNNNNCTCC 2 cut(s) 539, 569
Bsc4I CCNNNNNNNGG 6 cut(s) 634, 846, 896, 1252, 1253, 1357
Bse118I RCCGGY 1 cut(s) 66
Bse1I ACTGG 4 cut(s) 265, 320, 1447, 1682
BseBI CCWGG 3 cut(s) 1071, 1179, 1253
BseCI ATCGAT 1 cut(s) 412
BseDI CCNNGG 4 cut(s) 734, 1116, 1177, 1252
BseGI GGATG 5 cut(s) 608, 758, 932, 1699, 1711
BseLI CCNNNNNNNGG 6 cut(s) 634, 846, 896, 1252, 1253, 1357
BseMII CTCAG 4 cut(s) 438, 450, 591, 1212
BseNI ACTGG 4 cut(s) 265, 320, 1447, 1682
BseRI GAGGAG 1 cut(s) 187
BseSI GKGCMC 1 cut(s) 1209
BseXI GCAGC 7 cut(s) 373, 376, 796, 1063, 1099, 1413, 1583
BseYI CCCAGC 1 cut(s) 1108
Bsh1236I CGCG 1 cut(s) 663
BshFI GGCC 9 cut(s) 778, 900, 1045, 1069, 1175, 1235, 1497, 1552, 1758
BshNI GGYRCC 1 cut(s) 1206
BshVI ATCGAT 1 cut(s) 412
BsiHKAI GWGCWC 3 cut(s) 123, 578, 1631
BsiSI CCGG 4 cut(s) 10, 50, 67, 1351
BslI CCNNNNNNNGG 6 cut(s) 634, 846, 896, 1252, 1253, 1357
BsmAI GTCTC 4 cut(s) 30, 217, 724, 1068
BsmI GAATGC 1 cut(s) 850
BsnI GGCC 9 cut(s) 778, 900, 1045, 1069, 1175, 1235, 1497, 1552, 1758
Bso31I GGTCTC 2 cut(s) 724, 1068
Bsp1286I GDGCHC 4 cut(s) 123, 578, 1209, 1631
Bsp143I GATC 5 cut(s) 145, 236, 271, 413, 551
Bsp1720I GCTNAGC 1 cut(s) 577
BspACI CCGC 8 cut(s) 36, 75, 163, 166, 622, 964, 1013, 1261
BspANI GGCC 9 cut(s) 778, 900, 1045, 1069, 1175, 1235, 1497, 1552, 1758
BspCNI CTCAG 4 cut(s) 437, 451, 590, 1213
BspDI ATCGAT 1 cut(s) 412
BspFNI CGCG 1 cut(s) 663
BspLI GGNNCC 3 cut(s) 1176, 1208, 1714
BspMAI CTGCAG 2 cut(s) 289, 1573
BspPI GGATC 3 cut(s) 153, 244, 546
BspQI GCTCTTC 2 cut(s) 514, 724
BspT107I GGYRCC 1 cut(s) 1206
BspTNI GGTCTC 2 cut(s) 724, 1068
BsrBI CCGCTC 1 cut(s) 624
BsrFI RCCGGY 1 cut(s) 66
BsrI ACTGG 4 cut(s) 265, 320, 1447, 1682
BssAI RCCGGY 1 cut(s) 66
BssECI CCNNGG 4 cut(s) 734, 1116, 1177, 1252
BssMI GATC 5 cut(s) 145, 236, 271, 413, 551
BssNAI GTATAC 1 cut(s) 531
BssNI GRCGYC 1 cut(s) 53
BssSI CACGAG 1 cut(s) 571
Bst1107I GTATAC 1 cut(s) 531
Bst2BI CACGAG 1 cut(s) 571
Bst2UI CCWGG 3 cut(s) 1071, 1179, 1253
Bst6I CTCTTC 5 cut(s) 155, 514, 523, 724, 1415
BstACI GRCGYC 1 cut(s) 53
BstAPI GCANNNNNTGC 1 cut(s) 856
BstBAI YACGTR 1 cut(s) 959
BstC8I GCNNGC 4 cut(s) 748, 898, 1259, 1499
BstDEI CTNAG 5 cut(s) 424, 459, 577, 1022, 1221
BstDSI CCRYGG 1 cut(s) 1116
BstF5I GGATG 5 cut(s) 608, 758, 932, 1699, 1711
BstFNI CGCG 1 cut(s) 663
BstHHI GCGC 3 cut(s) 97, 665, 918
BstKTI GATC 5 cut(s) 148, 239, 274, 416, 554
BstMAI GTCTC 4 cut(s) 30, 217, 724, 1068
BstMBI GATC 5 cut(s) 145, 236, 271, 413, 551
BstMWI GCNNNNNNNGC 3 cut(s) 439, 856, 951
BstNI CCWGG 3 cut(s) 1071, 1179, 1253
BstNSI RCATGY 1 cut(s) 1261
BstPAI GACNNNNGTC 1 cut(s) 736
BstSCI CCNGG 3 cut(s) 1069, 1177, 1251
BstSFI CTRYAG 4 cut(s) 285, 1080, 1554, 1569
BstSLI GKGCMC 1 cut(s) 1209
BstUI CGCG 1 cut(s) 663
BstV1I GCAGC 7 cut(s) 373, 376, 796, 1063, 1099, 1413, 1583
BstV2I GAAGAC 5 cut(s) 93, 1138, 1168, 1280, 1665
BstX2I RGATCY 2 cut(s) 145, 551
BstYI RGATCY 2 cut(s) 145, 551
BstZ17I GTATAC 1 cut(s) 531
Bsu15I ATCGAT 1 cut(s) 412
BsuRI GGCC 9 cut(s) 778, 900, 1045, 1069, 1175, 1235, 1497, 1552, 1758
BsuTUI ATCGAT 1 cut(s) 412
BtgI CCRYGG 1 cut(s) 1116
BtsCI GGATG 5 cut(s) 608, 758, 932, 1699, 1711
BtsI GCAGTG 1 cut(s) 406
BtsIMutI CAGTG 5 cut(s) 406, 504, 747, 1309, 1485
Cac8I GCNNGC 4 cut(s) 748, 898, 1259, 1499
CfoI GCGC 3 cut(s) 97, 665, 918
Cfr10I RCCGGY 1 cut(s) 66
Cfr13I GGNCC 3 cut(s) 1174, 1234, 1712
ClaI ATCGAT 1 cut(s) 412
CseI GACGC 1 cut(s) 42
Csp6I GTAC 2 cut(s) 702, 1193
CviAII CATG 7 cut(s) 125, 305, 992, 1211, 1258, 1486, 1543
CviQI GTAC 2 cut(s) 702, 1193
DdeI CTNAG 5 cut(s) 424, 459, 577, 1022, 1221
DpnI GATC 5 cut(s) 147, 238, 273, 415, 553
DpnII GATC 5 cut(s) 145, 236, 271, 413, 551
DraI TTTAAA 1 cut(s) 408
EaeI YGGCCR 1 cut(s) 898
Eam1104I CTCTTC 5 cut(s) 155, 514, 523, 724, 1415
EarI CTCTTC 5 cut(s) 155, 514, 523, 724, 1415
EciI GGCGGA 1 cut(s) 953
Ecl136II GAGCTC 2 cut(s) 576, 1629
Eco147I AGGCCT 2 cut(s) 1497, 1552
Eco24I GRGCYC 2 cut(s) 578, 1631
Eco31I GGTCTC 2 cut(s) 724, 1068
Eco47I GGWCC 1 cut(s) 1712
Eco53kI GAGCTC 2 cut(s) 576, 1629
Eco57I CTGAAG 3 cut(s) 567, 876, 1685
Eco72I CACGTG 1 cut(s) 959
EcoICRI GAGCTC 2 cut(s) 576, 1629
EcoO109I RGGNCCY 2 cut(s) 1174, 1712
EcoRII CCWGG 3 cut(s) 1069, 1177, 1251
EcoT38I GRGCYC 2 cut(s) 578, 1631
FaeI CATG 7 cut(s) 128, 308, 995, 1214, 1261, 1489, 1546
FalI AAGNNNNNCTT 2 cut(s) 388, 420
FatI CATG 7 cut(s) 124, 304, 991, 1210, 1257, 1485, 1542
FauI CCCGC 2 cut(s) 29, 629
FauNDI CATATG 1 cut(s) 1356
FblI GTMKAC 2 cut(s) 530, 601
FokI GGATG 5 cut(s) 595, 745, 919, 1706, 1718
FriOI GRGCYC 2 cut(s) 578, 1631
FspBI CTAG 8 cut(s) 383, 486, 693, 714, 768, 774, 951, 1227
GlaI GCGC 3 cut(s) 96, 664, 917
GsaI CCCAGC 1 cut(s) 1112
HaeIII GGCC 9 cut(s) 778, 900, 1045, 1069, 1175, 1235, 1497, 1552, 1758
HapII CCGG 4 cut(s) 10, 50, 67, 1351
HgaI GACGC 1 cut(s) 42
HhaI GCGC 3 cut(s) 97, 665, 918
Hin1I GRCGYC 1 cut(s) 53
Hin1II CATG 7 cut(s) 128, 308, 995, 1214, 1261, 1489, 1546
Hin6I GCGC 3 cut(s) 95, 663, 916
HinP1I GCGC 3 cut(s) 95, 663, 916
HinfI GANTC 7 cut(s) 23, 85, 194, 368, 502, 784, 1164
HpaII CCGG 4 cut(s) 10, 50, 67, 1351
HphI GGTGA 5 cut(s) 223, 795, 861, 879, 1134
Hpy166II GTNNAC 8 cut(s) 531, 602, 803, 1193, 1483, 1525, 1586, 1615
Hpy188I TCNGA 5 cut(s) 190, 202, 358, 460, 711
Hpy8I GTNNAC 8 cut(s) 531, 602, 803, 1193, 1483, 1525, 1586, 1615
Hpy99I CGWCG 4 cut(s) 58, 182, 206, 849
HpyCH4IV ACGT 2 cut(s) 204, 958
HpyCH4V TGCA 7 cut(s) 287, 392, 791, 1501, 1571, 1598, 1643
HpyF10VI GCNNNNNNNGC 3 cut(s) 439, 856, 951
HpyF3I CTNAG 5 cut(s) 424, 459, 577, 1022, 1221
HpySE526I ACGT 2 cut(s) 204, 958
Hsp92I GRCGYC 1 cut(s) 53
Hsp92II CATG 7 cut(s) 128, 308, 995, 1214, 1261, 1489, 1546
HspAI GCGC 3 cut(s) 95, 663, 916
Kzo9I GATC 5 cut(s) 145, 236, 271, 413, 551
LguI GCTCTTC 2 cut(s) 514, 724
LmnI GCTCC 3 cut(s) 118, 629, 950
Lsp1109I GCAGC 7 cut(s) 373, 376, 796, 1063, 1099, 1413, 1583
LweI GCATC 5 cut(s) 674, 884, 1484, 1630, 1747
MaeI CTAG 8 cut(s) 383, 486, 693, 714, 768, 774, 951, 1227
MaeII ACGT 2 cut(s) 204, 958
MaeIII GTNAC 3 cut(s) 464, 499, 867
MalI GATC 5 cut(s) 147, 238, 273, 415, 553
MbiI CCGCTC 1 cut(s) 624
MboI GATC 5 cut(s) 145, 236, 271, 413, 551
MflI RGATCY 2 cut(s) 145, 551
MhlI GDGCHC 4 cut(s) 123, 578, 1209, 1631
MluCI AATT 6 cut(s) 43, 215, 559, 1047, 1097, 1700
MlyI GAGTC 4 cut(s) 32, 188, 496, 1158
MmeI TCCRAC 3 cut(s) 214, 225, 677
MroXI GAANNNNTTC 2 cut(s) 493, 820
MseI TTAA 3 cut(s) 407, 567, 1365
MslI CAYNNNNRTG 2 cut(s) 309, 1212
MspA1I CMGCKG 3 cut(s) 809, 896, 1112
MspI CCGG 4 cut(s) 10, 50, 67, 1351
MspR9I CCNGG 3 cut(s) 1071, 1179, 1253
Mva1269I GAATGC 1 cut(s) 850
MvaI CCWGG 3 cut(s) 1071, 1179, 1253
MvnI CGCG 1 cut(s) 663
MwoI GCNNNNNNNGC 3 cut(s) 439, 856, 951
NdeI CATATG 1 cut(s) 1356
NdeII GATC 5 cut(s) 145, 236, 271, 413, 551
NlaIII CATG 7 cut(s) 128, 308, 995, 1214, 1261, 1489, 1546
NlaIV GGNNCC 3 cut(s) 1176, 1208, 1714
NmeAIII GCCGAG 1 cut(s) 1045
NmuCI GTSAC 2 cut(s) 499, 867
NspI RCATGY 1 cut(s) 1261
PaeI GCATGC 1 cut(s) 1261
PceI AGGCCT 2 cut(s) 1497, 1552
PciSI GCTCTTC 2 cut(s) 514, 724
PcsI WCGNNNNNNNCGW 1 cut(s) 186
PctI GAATGC 1 cut(s) 850
PdmI GAANNNNTTC 2 cut(s) 493, 820
PfeI GAWTC 3 cut(s) 85, 368, 784
PflFI GACNNNGTC 1 cut(s) 1447
PleI GAGTC 4 cut(s) 31, 188, 496, 1158
PmaCI CACGTG 1 cut(s) 959
PmlI CACGTG 1 cut(s) 959
PpsI GAGTC 4 cut(s) 31, 188, 496, 1158
Ppu21I YACGTR 1 cut(s) 959
PpuMI RGGWCCY 1 cut(s) 1712
PshAI GACNNNNGTC 1 cut(s) 736
PsiI TTATAA 1 cut(s) 1765
Psp124BI GAGCTC 2 cut(s) 578, 1631
Psp5II RGGWCCY 1 cut(s) 1712
Psp6I CCWGG 3 cut(s) 1069, 1177, 1251
PspCI CACGTG 1 cut(s) 959
PspFI CCCAGC 1 cut(s) 1108
PspGI CCWGG 3 cut(s) 1069, 1177, 1251
PspN4I GGNNCC 3 cut(s) 1176, 1208, 1714
PspPI GGNCC 3 cut(s) 1174, 1234, 1712
PspPPI RGGWCCY 1 cut(s) 1712
PstI CTGCAG 2 cut(s) 289, 1573
PsuI RGATCY 2 cut(s) 145, 551
PsyI GACNNNGTC 1 cut(s) 1447
PvuII CAGCTG 3 cut(s) 809, 896, 1112
RsaI GTAC 2 cut(s) 703, 1194
RsaNI GTAC 2 cut(s) 702, 1193
RseI CAYNNNNRTG 2 cut(s) 309, 1212
SacI GAGCTC 2 cut(s) 578, 1631
SapI GCTCTTC 2 cut(s) 514, 724
SaqAI TTAA 3 cut(s) 407, 567, 1365
Sau3AI GATC 5 cut(s) 145, 236, 271, 413, 551
Sau96I GGNCC 3 cut(s) 1174, 1234, 1712
SchI GAGTC 4 cut(s) 32, 188, 496, 1158
ScrFI CCNGG 3 cut(s) 1071, 1179, 1253
SduI GDGCHC 4 cut(s) 123, 578, 1209, 1631
SfaNI GCATC 5 cut(s) 674, 884, 1484, 1630, 1747
SfcI CTRYAG 4 cut(s) 285, 1080, 1554, 1569
SgrAI CRCCGGYG 1 cut(s) 66
SinI GGWCC 1 cut(s) 1712
SmiMI CAYNNNNRTG 2 cut(s) 309, 1212
SmlI CTYRAG 2 cut(s) 751, 796
SmoI CTYRAG 2 cut(s) 751, 796
SphI GCATGC 1 cut(s) 1261
Sse9I AATT 6 cut(s) 43, 215, 559, 1047, 1097, 1700
SseBI AGGCCT 2 cut(s) 1497, 1552
SsiI CCGC 8 cut(s) 36, 75, 163, 166, 622, 964, 1013, 1261
SspI AATATT 1 cut(s) 1647
SspMI CTAG 8 cut(s) 383, 486, 693, 714, 768, 774, 951, 1227
SstI GAGCTC 2 cut(s) 578, 1631
StuI AGGCCT 2 cut(s) 1497, 1552
StyD4I CCNGG 3 cut(s) 1069, 1177, 1251
TaiI ACGT 2 cut(s) 207, 961
TaqI TCGA 5 cut(s) 104, 412, 814, 1325, 1338
TaqII GACCGA 1 cut(s) 726
TasI AATT 6 cut(s) 43, 215, 559, 1047, 1097, 1700
TatI WGTACW 1 cut(s) 1192
TauI GCSGC 3 cut(s) 78, 165, 168
TfiI GAWTC 3 cut(s) 85, 368, 784
Tru1I TTAA 3 cut(s) 407, 567, 1365
Tru9I TTAA 3 cut(s) 407, 567, 1365
TscAI CASTG 5 cut(s) 406, 504, 747, 1309, 1485
TseFI GTSAC 2 cut(s) 499, 867
TseI GCWGC 7 cut(s) 386, 389, 809, 1076, 1112, 1401, 1571
Tsp45I GTSAC 2 cut(s) 499, 867
TspDTI ATGAA 9 cut(s) 20, 125, 342, 462, 510, 1269, 1458, 1502, 1722
TspGWI ACGGA 2 cut(s) 166, 1310
TspRI CASTG 5 cut(s) 406, 504, 747, 1309, 1485
Tth111I GACNNNGTC 1 cut(s) 1447
VpaK11BI GGWCC 1 cut(s) 1712
XapI RAATTY 1 cut(s) 43
XbaI TCTAGA 1 cut(s) 692
XceI RCATGY 1 cut(s) 1261
XmiI GTMKAC 2 cut(s) 530, 601
XmnI GAANNNNTTC 2 cut(s) 493, 820
XspI CTAG 8 cut(s) 383, 486, 693, 714, 768, 774, 951, 1227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.