Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000029.1

Orthogroup ID

OG0009601

Physical Location & Seq

Genomic Coordinates Forward (+)

25529 .. 29341

Gene Structure 3813 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000029.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

atggagttggactccctcaaagtagagaagatagagagccaaattcaaccacttgaaccaaacaaaggcaccacctttttcagaacctgtttcaatggactcaacacactgtcaggtgtgggaatactatcagttccatttgctctatctcagggagggtggttgagcttagtgcttctcttctcggtagcaatcctatgttggtatacagggctgcttctacagcgatgtatggactcaaattcgcacataaaaacttatcccgacattggtcaagctgcttttggacgcaaaggaagagtggccatatccatctttatgtatcttgagctgtatttagttgcagttgaatttctaatactagaaggtgataacttaaaccagttgtttccaaacgtgagttttaacatgggaggccacacaattggaggtaagcaatgctttgttttagccactgcccttgtaattctgccgactacatggttgaagagcttgggattgctggcatatatttcagctggaggggttttggcttcgattattttggttgcttgtgttttttgggttggtgctgttgatagtgtgggatttcatgaaagaggtgatctcctgaattggaaaggattgcctactgctataagcttgtatttgttctgttactgtggtcatgcagtttttcccacattatgcaattccatgaaagatagaagccaattccccaaggtattgcttgtttgcttcataacaagcaccatcacctatggatccatggccgttttgggttacttgatgtttggagaatatttgaagtcccaagtgacattaaatcttcctgtacaaaaaattagtgctaaagtagcaattttcatcacaatagttaaccccttgactaagtatgcaattataatcactccaattgctactgctatagaggactcacgctatttttgcaacagtcatgctattatcagcatcatggtgaggacggggattgtgatcagcaccgtatgtgtggcattgatggttccatttttcggctatgtcatggcattcgtcggtgcttttctgagtgtaactgtctcaatattgttgccgtgcctgttctacctgaagattaacaatgttgctctcaggtttgggttcgagttgatgacaattgttgggattatggtgatgggatcttttgttggcgtagtaggcacttacacttctctgaaagaaattgggaaaggtcgcagcctatccggcggcgccccggcgtcgattgtggttccttgctgcattgacgagtggtgggtgttgccggatgggttatcggggcgaccagtggccggatcattgcggaggcactccatggattgtaaggcgctgggtgcttctctgtggtgggatgctaggaggcgattgcagtggtggtctcgagttcttaagctgaaggacgtagactcttggagttctctctctccgaggtggcaaggcaccatgttctggcttgctgcgtggtttgggtttctccggcgaggtgagctcgaaggggtaaccttgtggtggtggtggcctgcaggcgaggctcctggggagaaggatgaggattgtggcagctgtattttatttttgtttttgcaagttatgtttttggttaggttttattggtcactagcatgtccctactccgttgagctagggttgggtcaatttgaggtgccatggatgtggtgtcattcctggggacgaattggtttaatttcggtgttatcttatggtcagtgtgctgacgagcgatccttgcacgtggtctggttgtgggacatggtgtggaagagggcgttggtttttctggctgttgtccatgaggtggtatcaagatactcgggattccttgtagcccgagagtttgggcggtataggtggttaagggttgggccctttcggctcatggaggtcattcatgatgacggacccgtaactggtttaggtttttgggaggagagtggggagttcatgtcccccactggtcattcccgtttgattcaaaagtcaaaacgagcagaatcaaacattttcagtactagcattgatgatctccccgaaactgcattggtggaaatcctttgtcgcttgcggagttgcaaatatgttgttcaatgcaagtgtgtttcgaaacgttggtgcaatcttttgtcggatccttatttgattggtcgctttctgtggctccaattgggtcagatacccccaattgtaactcgtagtactcccatagtaaacagcaatttcgggcttgaactcttcactgctgaggtgtttgtgaaactaaggaatttgttcagtttgaaaagtaatccactggtgcttggaatgacttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04721 ko04723 ko04727 ko05032 ko05033 map04721 map04723 map04727 map05032 map05033

Pfam Domains

Protein Families

Aa_trans

Protein Analysis

788

Amino Acids

88.21

Weight (kDa)

8.71

Isoelectric Point (pI)

38.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009601)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15240 AT5G15240 AT5G15240
fragaria_vesca	FvH4_4g31320
malus_domestica	MD13G1071800.v1.1 MD13G1071900.v1.1 MD16G1072500.v1.1
prunus_persica	Prupe.1G275100_v2.0.a1
pyrus_communis	pycom13g06440 pycom16g06280
rosa_chinensis	RchiOBHm_Chr4g0439811
rosa_laevigata	RLG00000006237
rosa_multiflora	Rmu_co8493243.1_g000001 Rmu_ssc0000029.1_g000004
rosa_roxburghii	Rroxscaffold_5G00380710
rosa_rugosa	Rorug04G0321500 Rorug05G0306500 Rorug05G0306600
rosa_samantha	Rh4BG384800 Rh4CG399200 Rh4DG379000
rosa_wichuraiana	Rw4G031830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	905
AccB1I	GGYRCC	4 cut(s)	68, 1250, 1478, 1702
AccB7I	CCANNNNNTGG	2 cut(s)	1488, 1855
AccI	GTMKAC	2 cut(s)	206, 1443
AciI	CCGC	4 cut(s)	1248, 1342, 1900, 2122
AclI	AACGTT	1 cut(s)	2164
AclWI	GGATC	7 cut(s)	759, 772, 1186, 1342, 1776, 2180, 2193
AcoI	YGGCCR	3 cut(s)	303, 771, 1329
AcsI	RAATTY	4 cut(s)	42, 241, 350, 2320
AcuI	CTGAAG	2 cut(s)	1130, 1454
AcvI	CACGTG	1 cut(s)	1792
AcyI	GRCGYC	2 cut(s)	1251, 1259
AfaI	GTAC	3 cut(s)	837, 2068, 2254
AfiI	CCNNNNNNNGG	8 cut(s)	65, 269, 1034, 1331, 1488, 1548, 1855, 1967
AflII	CTTAAG	1 cut(s)	1427
AjnI	CCWGG	2 cut(s)	1573, 1724
AjuI	GAANNNNNNNTTGG	2 cut(s)	1811, 1843
Alw21I	GWGCWC	1 cut(s)	1530
Alw26I	GTCTC	2 cut(s)	1084, 1422
AlwI	GGATC	7 cut(s)	759, 772, 1186, 1342, 1776, 2180, 2193
AlwNI	CAGNNNCTG	1 cut(s)	87
Ama87I	CYCGRG	3 cut(s)	1419, 1870, 1887
AoxI	GGCC	6 cut(s)	303, 415, 771, 1329, 1556, 1922
ApaI	GGGCCC	1 cut(s)	1926
ApeKI	GCWGC	6 cut(s)	214, 278, 1236, 1278, 1496, 1599
ApoI	RAATTY	4 cut(s)	42, 241, 350, 2320
Asp700I	GAANNNNTTC	1 cut(s)	2324
AspLEI	GCGC	2 cut(s)	1253, 1369
AspS9I	GGNCC	3 cut(s)	1922, 1923, 1958
AsuC2I	CCSGG	1 cut(s)	1256
AsuHPI	GGTGA	6 cut(s)	380, 614, 748, 991, 1183, 1535
AsuII	TTCGAA	1 cut(s)	2159
AvaI	CYCGRG	3 cut(s)	1419, 1870, 1887
AvaII	GGWCC	1 cut(s)	1958
BaeGI	GKGCMC	1 cut(s)	1926
BalI	TGGCCA	1 cut(s)	305
BamHI	GGATCC	2 cut(s)	764, 2185
BanI	GGYRCC	4 cut(s)	68, 1250, 1478, 1702
BanII	GRGCYC	2 cut(s)	1530, 1926
BbrPI	CACGTG	1 cut(s)	1792
Bbv12I	GWGCWC	1 cut(s)	1530
BbvCI	CCTCAGC	1 cut(s)	2298
BbvI	GCAGC	6 cut(s)	201, 265, 1248, 1265, 1483, 1611
BccI	CCATC	5 cut(s)	320, 761, 1015, 1168, 1301
BceAI	ACGGC	2 cut(s)	758, 1078
BciT130I	CCWGG	2 cut(s)	1575, 1726
BclI	TGATCA	1 cut(s)	996
BcnI	CCSGG	1 cut(s)	1256
BcoDI	GTCTC	2 cut(s)	1084, 1422
BfaI	CTAG	5 cut(s)	362, 1395, 1658, 1682, 2070
BfmI	CTRYAG	3 cut(s)	221, 927, 1560
BfoI	RGCGCY	2 cut(s)	1254, 1370
BfrI	CTTAAG	1 cut(s)	1427
BglI	GCCNNNNNGGC	2 cut(s)	1245, 1930
BisI	GCNGC	7 cut(s)	215, 279, 1237, 1249, 1279, 1497, 1600
BlsI	GCNGC	7 cut(s)	216, 280, 1238, 1250, 1280, 1498, 1601
BmcAI	AGTACT	2 cut(s)	2068, 2254
Bme1390I	CCNGG	3 cut(s)	1256, 1575, 1726
Bme18I	GGWCC	1 cut(s)	1958
BmeT110I	CYCGRG	3 cut(s)	1419, 1870, 1887
BmgT120I	GGNCC	3 cut(s)	1922, 1923, 1958
BmrFI	CCNGG	3 cut(s)	1256, 1575, 1726
BmsI	GCATC	2 cut(s)	981, 1381
BoxI	GACNNNNGTC	1 cut(s)	270
BplI	GAGNNNNNCTC	5 cut(s)	28, 591, 623, 1512, 1544
BpmI	CTGGAG	1 cut(s)	540
Bpu10I	CCTNAGC	1 cut(s)	2298
Bpu14I	TTCGAA	1 cut(s)	2159
BpuEI	CTTGAG	1 cut(s)	347
BpuMI	CCSGG	1 cut(s)	1256
BsaAI	YACGTR	1 cut(s)	1792
BsaBI	GATNNNNATC	1 cut(s)	995
BsaHI	GRCGYC	2 cut(s)	1251, 1259
BsaI	GGTCTC	1 cut(s)	1422
BsaJI	CCNNGG	8 cut(s)	720, 768, 1254, 1353, 1466, 1574, 1706, 1725
BsaXI	ACNNNNNCTCC	2 cut(s)	1988, 2018
Bsc4I	CCNNNNNNNGG	8 cut(s)	65, 269, 1034, 1331, 1488, 1548, 1855, 1967
Bse1I	ACTGG	5 cut(s)	382, 1325, 1972, 2017, 2352
Bse3DI	GCAATG	2 cut(s)	443, 1337
Bse8I	GATNNNNATC	1 cut(s)	995
BseBI	CCWGG	2 cut(s)	1575, 1726
BseDI	CCNNGG	8 cut(s)	720, 768, 1254, 1353, 1466, 1574, 1706, 1725
BseGI	GGATG	4 cut(s)	1312, 1396, 1591, 1716
BseJI	GATNNNNATC	1 cut(s)	995
BseLI	CCNNNNNNNGG	8 cut(s)	65, 269, 1034, 1331, 1488, 1548, 1855, 1967
BseMI	GCAATG	2 cut(s)	443, 1337
BseMII	CTCAG	4 cut(s)	164, 1058, 1144, 2289
BseNI	ACTGG	5 cut(s)	382, 1325, 1972, 2017, 2352
BseRI	GAGGAG	1 cut(s)	2000
BseSI	GKGCMC	1 cut(s)	1926
BseXI	GCAGC	6 cut(s)	201, 265, 1248, 1265, 1483, 1611
BseYI	CCCAGC	1 cut(s)	1369
BshFI	GGCC	6 cut(s)	305, 417, 773, 1331, 1558, 1924
BshNI	GGYRCC	4 cut(s)	68, 1250, 1478, 1702
BsiHKAI	GWGCWC	1 cut(s)	1530
BsiHKCI	CYCGRG	3 cut(s)	1419, 1870, 1887
BsiSI	CCGG	5 cut(s)	1245, 1256, 1304, 1332, 1516
BslFI	GGGAC	5 cut(s)	796, 1650, 1743, 1820, 1990
BslI	CCNNNNNNNGG	8 cut(s)	65, 269, 1034, 1331, 1488, 1548, 1855, 1967
BsmAI	GTCTC	2 cut(s)	1084, 1422
BsmFI	GGGAC	5 cut(s)	796, 1650, 1743, 1820, 1990
BsmI	GAATGC	1 cut(s)	1049
BsnI	GGCC	6 cut(s)	305, 417, 773, 1331, 1558, 1924
Bso31I	GGTCTC	1 cut(s)	1422
BsoBI	CYCGRG	3 cut(s)	1419, 1870, 1887
Bsp119I	TTCGAA	1 cut(s)	2159
Bsp120I	GGGCCC	1 cut(s)	1922
Bsp1286I	GDGCHC	2 cut(s)	1530, 1926
Bsp1407I	TGTACA	1 cut(s)	835
Bsp143I	GATC	8 cut(s)	604, 764, 996, 1178, 1334, 1781, 2080, 2185
Bsp19I	CCATGG	3 cut(s)	768, 1353, 1706
BspACI	CCGC	4 cut(s)	1248, 1342, 1900, 2122
BspANI	GGCC	6 cut(s)	305, 417, 773, 1331, 1558, 1924
BspCNI	CTCAG	4 cut(s)	163, 1059, 1143, 2290
BspHI	TCATGA	2 cut(s)	592, 1948
BspMAI	CTGCAG	1 cut(s)	1564
BspPI	GGATC	7 cut(s)	759, 772, 1186, 1342, 1776, 2180, 2193
BspQI	GCTCTTC	1 cut(s)	482
BspT104I	TTCGAA	1 cut(s)	2159
BspT107I	GGYRCC	4 cut(s)	68, 1250, 1478, 1702
BspTI	CTTAAG	1 cut(s)	1427
BspTNI	GGTCTC	1 cut(s)	1422
BsrDI	GCAATG	2 cut(s)	443, 1337
BsrGI	TGTACA	1 cut(s)	835
BsrI	ACTGG	5 cut(s)	382, 1325, 1972, 2017, 2352
BssECI	CCNNGG	8 cut(s)	720, 768, 1254, 1353, 1466, 1574, 1706, 1725
BssMI	GATC	8 cut(s)	604, 764, 996, 1178, 1334, 1781, 2080, 2185
BssNAI	GTATAC	1 cut(s)	207
BssNI	GRCGYC	2 cut(s)	1251, 1259
BssT1I	CCWWGG	4 cut(s)	720, 768, 1353, 1706
Bst1107I	GTATAC	1 cut(s)	207
Bst2UI	CCWGG	2 cut(s)	1575, 1726
Bst4CI	ACNGT	5 cut(s)	111, 662, 956, 1006, 1078
Bst6I	CTCTTC	5 cut(s)	185, 292, 482, 1814, 2294
BstACI	GRCGYC	2 cut(s)	1251, 1259
BstAFI	CTTAAG	1 cut(s)	1427
BstAUI	TGTACA	1 cut(s)	835
BstBAI	YACGTR	1 cut(s)	1792
BstBI	TTCGAA	1 cut(s)	2159
BstC8I	GCNNGC	5 cut(s)	504, 1494, 1560, 1564, 2120
BstDEI	CTNAG	8 cut(s)	150, 169, 891, 1067, 1130, 2298, 2315, 2364
BstDSI	CCRYGG	3 cut(s)	768, 1353, 1706
BstEII	GGTNACC	1 cut(s)	1537
BstF5I	GGATG	4 cut(s)	1312, 1396, 1591, 1716
BstH2I	RGCGCY	2 cut(s)	1254, 1370
BstHHI	GCGC	2 cut(s)	1253, 1369
BstKTI	GATC	8 cut(s)	607, 767, 999, 1181, 1337, 1784, 2083, 2188
BstMAI	GTCTC	2 cut(s)	1084, 1422
BstMBI	GATC	8 cut(s)	604, 764, 996, 1178, 1334, 1781, 2080, 2185
BstNI	CCWGG	2 cut(s)	1575, 1726
BstNSI	RCATGY	1 cut(s)	1665
BstPAI	GACNNNNGTC	1 cut(s)	270
BstPI	GGTNACC	1 cut(s)	1537
BstSCI	CCNGG	3 cut(s)	1254, 1573, 1724
BstSFI	CTRYAG	3 cut(s)	221, 927, 1560
BstSLI	GKGCMC	1 cut(s)	1926
BstV1I	GCAGC	6 cut(s)	201, 265, 1248, 1265, 1483, 1611
BstX2I	RGATCY	3 cut(s)	764, 1178, 2185
BstXI	CCANNNNNNTGG	2 cut(s)	425, 1713
BstYI	RGATCY	3 cut(s)	764, 1178, 2185
BstZ17I	GTATAC	1 cut(s)	207
BsuRI	GGCC	6 cut(s)	305, 417, 773, 1331, 1558, 1924
BtgI	CCRYGG	3 cut(s)	768, 1353, 1706
BtgZI	GCGATG	1 cut(s)	241
BtsCI	GGATG	4 cut(s)	1312, 1396, 1591, 1716
BtsI	GCAGTG	3 cut(s)	453, 1415, 2292
BtsIMutI	CAGTG	8 cut(s)	107, 453, 1332, 1415, 1772, 2010, 2292, 2345
Cac8I	GCNNGC	5 cut(s)	504, 1494, 1560, 1564, 2120
CaiI	CAGNNNCTG	1 cut(s)	87
CciI	TCATGA	2 cut(s)	592, 1948
CfoI	GCGC	2 cut(s)	1253, 1369
Cfr13I	GGNCC	3 cut(s)	1922, 1923, 1958
CseI	GACGC	2 cut(s)	297, 1248
Csp6I	GTAC	3 cut(s)	836, 2067, 2253
CspCI	CAANNNNNGTGG	2 cut(s)	442, 477
CviQI	GTAC	3 cut(s)	836, 2067, 2253
DdeI	CTNAG	8 cut(s)	150, 169, 891, 1067, 1130, 2298, 2315, 2364
DinI	GGCGCC	1 cut(s)	1252
DpnI	GATC	8 cut(s)	606, 766, 998, 1180, 1336, 1783, 2082, 2187
DpnII	GATC	8 cut(s)	604, 764, 996, 1178, 1334, 1781, 2080, 2185
EaeI	YGGCCR	3 cut(s)	303, 771, 1329
Eam1104I	CTCTTC	5 cut(s)	185, 292, 482, 1814, 2294
EarI	CTCTTC	5 cut(s)	185, 292, 482, 1814, 2294
Ecl136II	GAGCTC	1 cut(s)	1528
Eco130I	CCWWGG	4 cut(s)	720, 768, 1353, 1706
Eco24I	GRGCYC	2 cut(s)	1530, 1926
Eco31I	GGTCTC	1 cut(s)	1422
Eco47I	GGWCC	1 cut(s)	1958
Eco53kI	GAGCTC	1 cut(s)	1528
Eco57I	CTGAAG	2 cut(s)	1130, 1454
Eco72I	CACGTG	1 cut(s)	1792
Eco88I	CYCGRG	3 cut(s)	1419, 1870, 1887
Eco91I	GGTNACC	1 cut(s)	1537
EcoICRI	GAGCTC	1 cut(s)	1528
EcoO109I	RGGNCCY	1 cut(s)	1923
EcoO65I	GGTNACC	1 cut(s)	1537
EcoRII	CCWGG	2 cut(s)	1573, 1724
EcoT14I	CCWWGG	4 cut(s)	720, 768, 1353, 1706
EcoT38I	GRGCYC	2 cut(s)	1530, 1926
EgeI	GGCGCC	1 cut(s)	1252
EheI	GGCGCC	1 cut(s)	1252
ErhI	CCWWGG	4 cut(s)	720, 768, 1353, 1706
FalI	AAGNNNNNCTT	2 cut(s)	425, 457
FaqI	GGGAC	5 cut(s)	796, 1650, 1743, 1820, 1990
FbaI	TGATCA	1 cut(s)	996
FblI	GTMKAC	2 cut(s)	206, 1443
Fnu4HI	GCNGC	7 cut(s)	215, 279, 1237, 1249, 1279, 1497, 1600
FokI	GGATG	4 cut(s)	1319, 1403, 1598, 1723
FriOI	GRGCYC	2 cut(s)	1530, 1926
Fsp4HI	GCNGC	7 cut(s)	215, 279, 1237, 1249, 1279, 1497, 1600
FspBI	CTAG	5 cut(s)	362, 1395, 1658, 1682, 2070
GlaI	GCGC	2 cut(s)	1252, 1368
GluI	GCNGC	7 cut(s)	215, 279, 1237, 1249, 1279, 1497, 1600
GsaI	CCCAGC	1 cut(s)	1373
GsuI	CTGGAG	1 cut(s)	540
HaeII	RGCGCY	2 cut(s)	1254, 1370
HaeIII	GGCC	6 cut(s)	305, 417, 773, 1331, 1558, 1924
HapII	CCGG	5 cut(s)	1245, 1256, 1304, 1332, 1516
HgaI	GACGC	2 cut(s)	297, 1248
HhaI	GCGC	2 cut(s)	1253, 1369
Hin1I	GRCGYC	2 cut(s)	1251, 1259
Hin6I	GCGC	2 cut(s)	1251, 1367
HinP1I	GCGC	2 cut(s)	1251, 1367
HincII	GTYRAC	1 cut(s)	880
HindII	GTYRAC	1 cut(s)	880
HindIII	AAGCTT	1 cut(s)	640
HinfI	GANTC	8 cut(s)	11, 99, 236, 935, 1445, 1875, 2029, 2051
HpaI	GTTAAC	1 cut(s)	880
HpaII	CCGG	5 cut(s)	1245, 1256, 1304, 1332, 1516
HphI	GGTGA	6 cut(s)	380, 614, 748, 991, 1183, 1535
Hpy166II	GTNNAC	4 cut(s)	207, 880, 1444, 2266
Hpy188I	TCNGA	6 cut(s)	83, 1068, 1215, 1467, 2185, 2229
Hpy188III	TCNNGA	8 cut(s)	263, 326, 593, 610, 1419, 1863, 1872, 1949
Hpy8I	GTNNAC	4 cut(s)	207, 880, 1444, 2266
Hpy99I	CGWCG	2 cut(s)	1058, 1264
HpyAV	CCTTC	4 cut(s)	359, 1429, 1526, 1576
HpyCH4III	ACNGT	5 cut(s)	111, 662, 956, 1006, 1078
HpyCH4IV	ACGT	4 cut(s)	396, 1440, 1791, 2164
HpyF3I	CTNAG	8 cut(s)	150, 169, 891, 1067, 1130, 2298, 2315, 2364
HpySE526I	ACGT	4 cut(s)	396, 1440, 1791, 2164
Hsp92I	GRCGYC	2 cut(s)	1251, 1259
HspAI	GCGC	2 cut(s)	1251, 1367
KasI	GGCGCC	1 cut(s)	1250
Ksp22I	TGATCA	1 cut(s)	996
KspAI	GTTAAC	1 cut(s)	880
Kzo9I	GATC	8 cut(s)	604, 764, 996, 1178, 1334, 1781, 2080, 2185
LguI	GCTCTTC	1 cut(s)	482
LmnI	GCTCC	2 cut(s)	1576, 2220
Lsp1109I	GCAGC	6 cut(s)	201, 265, 1248, 1265, 1483, 1611
LweI	GCATC	2 cut(s)	981, 1381
MaeI	CTAG	5 cut(s)	362, 1395, 1658, 1682, 2070
MaeII	ACGT	4 cut(s)	396, 1440, 1791, 2164
MaeIII	GTNAC	8 cut(s)	656, 782, 817, 1072, 1537, 1653, 1963, 2242
MalI	GATC	8 cut(s)	606, 766, 998, 1180, 1336, 1783, 2082, 2187
MboI	GATC	8 cut(s)	604, 764, 996, 1178, 1334, 1781, 2080, 2185
MboII	GAAGA	8 cut(s)	40, 172, 309, 499, 821, 1123, 1831, 2281
MfeI	CAATTG	5 cut(s)	423, 915, 1155, 2219, 2238
MflI	RGATCY	3 cut(s)	764, 1178, 2185
MhlI	GDGCHC	2 cut(s)	1530, 1926
MlsI	TGGCCA	1 cut(s)	305
MluNI	TGGCCA	1 cut(s)	305
Mly113I	GGCGCC	1 cut(s)	1251
MlyI	GAGTC	5 cut(s)	5, 93, 230, 929, 1439
MmeI	TCCRAC	1 cut(s)	2163
Mox20I	TGGCCA	1 cut(s)	305
MroXI	GAANNNNTTC	1 cut(s)	2324
MscI	TGGCCA	1 cut(s)	305
MseI	TTAA	8 cut(s)	377, 405, 824, 879, 1116, 1428, 1742, 1913
MslI	CAYNNNNRTG	4 cut(s)	317, 977, 1660, 1711
Msp20I	TGGCCA	1 cut(s)	305
MspA1I	CMGCKG	2 cut(s)	518, 1602
MspCI	CTTAAG	1 cut(s)	1427
MspI	CCGG	5 cut(s)	1245, 1256, 1304, 1332, 1516
MspR9I	CCNGG	3 cut(s)	1256, 1575, 1726
MunI	CAATTG	5 cut(s)	423, 915, 1155, 2219, 2238
Mva1269I	GAATGC	1 cut(s)	1049
MvaI	CCWGG	2 cut(s)	1575, 1726
NarI	GGCGCC	1 cut(s)	1251
NciI	CCSGG	1 cut(s)	1256
NcoI	CCATGG	3 cut(s)	768, 1353, 1706
NdeII	GATC	8 cut(s)	604, 764, 996, 1178, 1334, 1781, 2080, 2185
NmuCI	GTSAC	2 cut(s)	817, 1653
NspI	RCATGY	1 cut(s)	1665
NspV	TTCGAA	1 cut(s)	2159
PaeR7I	CTCGAG	1 cut(s)	1419
PagI	TCATGA	2 cut(s)	592, 1948
PciSI	GCTCTTC	1 cut(s)	482
PctI	GAATGC	1 cut(s)	1049
PdmI	GAANNNNTTC	1 cut(s)	2324
PfeI	GAWTC	3 cut(s)	1875, 2029, 2051
PflMI	CCANNNNNTGG	2 cut(s)	1488, 1855
PkrI	GCNGC	7 cut(s)	216, 280, 1238, 1250, 1280, 1498, 1601
PleI	GAGTC	5 cut(s)	5, 93, 230, 929, 1439
PluTI	GGCGCC	1 cut(s)	1254
PmaCI	CACGTG	1 cut(s)	1792
PmlI	CACGTG	1 cut(s)	1792
PpsI	GAGTC	5 cut(s)	5, 93, 230, 929, 1439
Ppu21I	YACGTR	1 cut(s)	1792
PshAI	GACNNNNGTC	1 cut(s)	270
PsiI	TTATAA	1 cut(s)	905
Psp124BI	GAGCTC	1 cut(s)	1530
Psp1406I	AACGTT	1 cut(s)	2164
Psp6I	CCWGG	2 cut(s)	1573, 1724
PspCI	CACGTG	1 cut(s)	1792
PspEI	GGTNACC	1 cut(s)	1537
PspFI	CCCAGC	1 cut(s)	1369
PspGI	CCWGG	2 cut(s)	1573, 1724
PspOMI	GGGCCC	1 cut(s)	1922
PspPI	GGNCC	3 cut(s)	1922, 1923, 1958
PstI	CTGCAG	1 cut(s)	1564
PstNI	CAGNNNCTG	1 cut(s)	87
PsuI	RGATCY	3 cut(s)	764, 1178, 2185
PvuII	CAGCTG	2 cut(s)	518, 1602
RsaI	GTAC	3 cut(s)	837, 2068, 2254
RsaNI	GTAC	3 cut(s)	836, 2067, 2253
RseI	CAYNNNNRTG	4 cut(s)	317, 977, 1660, 1711
SacI	GAGCTC	1 cut(s)	1530
SapI	GCTCTTC	1 cut(s)	482
SaqAI	TTAA	8 cut(s)	377, 405, 824, 879, 1116, 1428, 1742, 1913
SatI	GCNGC	7 cut(s)	215, 279, 1237, 1249, 1279, 1497, 1600
Sau3AI	GATC	8 cut(s)	604, 764, 996, 1178, 1334, 1781, 2080, 2185
Sau96I	GGNCC	3 cut(s)	1922, 1923, 1958
SbfI	CCTGCAGG	1 cut(s)	1564
ScaI	AGTACT	2 cut(s)	2068, 2254
SchI	GAGTC	5 cut(s)	5, 93, 230, 929, 1439
ScrFI	CCNGG	3 cut(s)	1256, 1575, 1726
SdaI	CCTGCAGG	1 cut(s)	1564
SduI	GDGCHC	2 cut(s)	1530, 1926
SfaNI	GCATC	2 cut(s)	981, 1381
SfcI	CTRYAG	3 cut(s)	221, 927, 1560
SfoI	GGCGCC	1 cut(s)	1252
Sfr274I	CTCGAG	1 cut(s)	1419
SfuI	TTCGAA	1 cut(s)	2159
SinI	GGWCC	1 cut(s)	1958
SlaI	CTCGAG	1 cut(s)	1419
SmiMI	CAYNNNNRTG	4 cut(s)	317, 977, 1660, 1711
SmlI	CTYRAG	3 cut(s)	326, 1419, 1427
SmoI	CTYRAG	3 cut(s)	326, 1419, 1427
Sse8387I	CCTGCAGG	1 cut(s)	1564
SsiI	CCGC	4 cut(s)	1248, 1342, 1900, 2122
SspDI	GGCGCC	1 cut(s)	1250
SspI	AATATT	2 cut(s)	803, 1086
SspMI	CTAG	5 cut(s)	362, 1395, 1658, 1682, 2070
SstI	GAGCTC	1 cut(s)	1530
StyD4I	CCNGG	3 cut(s)	1254, 1573, 1724
StyI	CCWWGG	4 cut(s)	720, 768, 1353, 1706
TaaI	ACNGT	5 cut(s)	111, 662, 956, 1006, 1078
TaiI	ACGT	4 cut(s)	399, 1443, 1794, 2167
TaqI	TCGA	6 cut(s)	536, 1143, 1262, 1420, 1530, 2159
TatI	WGTACW	3 cut(s)	835, 2066, 2252
TauI	GCSGC	1 cut(s)	1251
TfiI	GAWTC	3 cut(s)	1875, 2029, 2051
Tru1I	TTAA	8 cut(s)	377, 405, 824, 879, 1116, 1428, 1742, 1913
Tru9I	TTAA	8 cut(s)	377, 405, 824, 879, 1116, 1428, 1742, 1913
TscAI	CASTG	8 cut(s)	114, 460, 1332, 1415, 1772, 2017, 2299, 2352
TseFI	GTSAC	2 cut(s)	817, 1653
TseI	GCWGC	6 cut(s)	214, 278, 1236, 1278, 1496, 1599
Tsp45I	GTSAC	2 cut(s)	817, 1653
TspDTI	ATGAA	7 cut(s)	581, 609, 713, 730, 856, 1937, 1990
TspGWI	ACGGA	2 cut(s)	1663, 1971
TspRI	CASTG	8 cut(s)	114, 460, 1332, 1415, 1772, 2017, 2299, 2352
Van91I	CCANNNNNTGG	2 cut(s)	1488, 1855
Vha464I	CTTAAG	1 cut(s)	1427
VpaK11BI	GGWCC	1 cut(s)	1958
XapI	RAATTY	4 cut(s)	42, 241, 350, 2320
XceI	RCATGY	1 cut(s)	1665
XcmI	CCANNNNNNNNNTGG	1 cut(s)	775
XhoI	CTCGAG	1 cut(s)	1419
XmiI	GTMKAC	2 cut(s)	206, 1443
XmnI	GAANNNNTTC	1 cut(s)	2324
XspI	CTAG	5 cut(s)	362, 1395, 1658, 1682, 2070
ZrmI	AGTACT	2 cut(s)	2068, 2254

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.