Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000333.1

Orthogroup ID

OG0006775

Physical Location & Seq

Genomic Coordinates Reverse (-)

11348 .. 16449

Gene Structure 5102 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000333.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

atgatggttgcaaaatataaagatccacgtgatgcttgtgctgcaattgttgccgaatcttataaactctggctgcagtatgaaacccgtacagatgatattacagtgatcgtggtgcatgtagatgggctaactgctactgctgttggtcaatcagtacatcctggttctgttttacggccacctgttcctcaagttgtagaggttacaggatcagaatctccttcaaccattagctggaactcaaggaaccctcgcataaaacatgatttgtcaaaggcacgtcttcgtgtgattgaaaattctctagaaaacgggcaagtttgggttcctccgcctccagcccacagaaaaacctgggaggaagaggcacaaattgagcgagctttacatgatcatttcctcttcagaaaacttaccgactctcagtgtcatgttttattggattgcatgcaaagggttgaggtccagcctggagacattgttgttagacagggtggtgaaggtgactgcttttatgttgttggcagtggagaatttgaggtgtcggcaacccaggaagaaaagaacggagaggttccgagggttttgcaacgatatacagctgacaaactgtcatcctttggagaactagcactaatgtataacaaaccactccaggcatccgttcgtgctgtcaccactggaaccctctgggctttaagaagagaagactttcgtggaattctaatgtcagagttttctaatttgtcatatttgaagttgcttcgatcagtggatcttttatccaggttgacaatattacagctcagccatattgctgattctctttctgaggtttcattctcagatgggcaaacaattgtcaatgagaatgaaggcctattggcattgtacattatccagaagggaaaagtgaggattacagttgacgcaagttcagttagcaatccagttgtctgcagtctcatgtctgacaatcaaaaacaaggtgataatcctcagagtggtaaagagatcatagtggagaagacagagggaagctactttggcgaatggacacttctcggggaacatattgatttgtttaatgcagttgctgtgggggatgttgtttgtgctgttttgacaaaggaaaaatttgattcagtcattggcccaatgacaaagcttactcaggatgatcagaaatcaagggatcaatcatcggaaactttaatggaatctgttaaaagtattgatttctctgctcttactaaagttcagcttgctgatatggagtggagaaagtgtctgtattctactgactgcagtgagattgggcttgttcttttaagagatccagaaaatttgcttagtttgaaaaggttttcaaagaagaaggtcagaaagattggaaaggaagcacaagtattaaaagagaaggatctaatcaagagcataagcccttcagcttgtgtgccacaggttctatccacttgtgttgatcagacacatgctgcaatactgctcaatacatgcattgcttgtccattggcctcgatacttcgcacaccccttgatgaaccgtctgcccaattttgtacagcctctctaattactgctttggaggatctccacaagaataacgttctctacagaggcttgtctcctgatgcattaatgttggaccacaagggacatttacagattgtagacttcagatttgggaaaaagttgtctggccaaagaacatatacaatttgtggaatggcagactttttagctccagaggtagttcagggaataggccatggtttcccagctgactggtgggcattgggagtcttgatatatttcatgttacaaggtgaattgccttttgggtcgtggagagaaagtgagcttgatatctttgcaaagattgcgaagggacagcttaatcttcctcaaactttcagccctgcagttgttgatctcattaccaagttacttgaggttgatgaaaacaccagactaggaagccaaggttgtgattctgttaaaagtcatccctggttcgatggtattgattggaaagggattagagactctagttttcctgttcctcaggagatcacctctcgcatagctcaacatttggaaagtcactcagatgagtatagtgctcctcaaggttctccgtcacacaatgaagaagaacttgacattccggaatggtttgatgactggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04022 ko04540 ko04611 ko04713 ko04714 ko04730 ko04740 ko04923 ko04924 ko04970 map04022 map04540 map04611 map04713 map04714 map04730 map04740 map04923 map04924 map04970

Pfam Domains

Protein Families

PP2C Pkinase cNMP_binding

Protein Analysis

737

Amino Acids

82.1

Weight (kDa)

5.25

Isoelectric Point (pI)

41.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20050 AT2G20050
fragaria_vesca	FvH4_1g05740 FvH4_1g05740 FvH4_1g05740
malus_domestica	MD02G1058500.v1.1 MD15G1192800.v1.1
prunus_persica	Prupe.7G224500_v2.0.a1 Prupe.7G224500_v2.0.a1 Prupe.7G224500_v2.0.a1 Prupe.7G224500_v2.0.a1
pyrus_communis	pycom02g04740 pycom15g17250 pycom15g17260
rosa_chinensis	RchiOBHm_Chr2g0091381
rosa_laevigata	RLG00000016219
rosa_multiflora	Rmu_ssc0000333.1_g000004 Rmu_ssc0000333.1_g000011
rosa_roxburghii	Rroxscaffold_2G00150130
rosa_rugosa	Rorug02G0017200 Rorug02G0017300
rosa_samantha	Rh2AG062300 Rh2BG061300 Rh2CG063400 Rh2DG061900
rosa_wichuraiana	Rw2G005790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	63
AccB7I	CCANNNNNTGG	1 cut(s)	237
AccI	GTMKAC	1 cut(s)	1695
AccIII	TCCGGA	1 cut(s)	2191
AciI	CCGC	1 cut(s)	335
AclI	AACGTT	1 cut(s)	1629
AclWI	GGATC	7 cut(s)	17, 220, 786, 1206, 1334, 1434, 1620
AcoI	YGGCCR	2 cut(s)	179, 1723
AcsI	RAATTY	5 cut(s)	301, 536, 723, 1139, 1348
AcuI	CTGAAG	3 cut(s)	391, 1434, 1684
AcvI	CACGTG	1 cut(s)	29
AfaI	GTAC	4 cut(s)	91, 159, 896, 1585
AfiI	CCNNNNNNNGG	2 cut(s)	237, 1007
AgsI	TTSAA	5 cut(s)	228, 299, 760, 1363, 1374
AhdI	GACNNNNNGTC	1 cut(s)	613
AjiI	CACGTC	1 cut(s)	284
AjnI	CCWGG	7 cut(s)	163, 356, 472, 555, 657, 788, 2033
AjuI	GAANNNNNNNTTGG	2 cut(s)	1845, 1877
Alw21I	GWGCWC	1 cut(s)	2149
Alw26I	GTCTC	4 cut(s)	471, 971, 1653, 2061
AlwI	GGATC	7 cut(s)	17, 220, 786, 1206, 1334, 1434, 1620
AlwNI	CAGNNNCTG	1 cut(s)	1100
Ama87I	CYCGRG	1 cut(s)	1067
Aor13HI	TCCGGA	1 cut(s)	2191
AoxI	GGCC	6 cut(s)	179, 880, 1156, 1536, 1723, 1789
ApeKI	GCWGC	3 cut(s)	41, 73, 1499
ApoI	RAATTY	5 cut(s)	301, 536, 723, 1139, 1348
ArsI	GACNNNNNNTTYG	2 cut(s)	1688, 1720
AseI	ATTAAT	1 cut(s)	1661
Asp700I	GAANNNNTTC	1 cut(s)	714
AspS9I	GGNCC	3 cut(s)	466, 1157, 1669
AsuHPI	GGTGA	6 cut(s)	512, 518, 670, 1004, 1862, 2089
AvaI	CYCGRG	1 cut(s)	1067
AvaII	GGWCC	2 cut(s)	466, 1669
AxyI	CCTNAGG	1 cut(s)	2088
BalI	TGGCCA	1 cut(s)	1725
BbrPI	CACGTG	1 cut(s)	29
BbsI	GAAGAC	3 cut(s)	278, 717, 1037
Bbv12I	GWGCWC	1 cut(s)	2149
BbvI	GCAGC	3 cut(s)	28, 60, 1486
BccI	CCATC	3 cut(s)	119, 845, 2036
BceAI	ACGGC	1 cut(s)	194
BcgI	CGANNNNNNTGC	2 cut(s)	571, 605
BciT130I	CCWGG	7 cut(s)	165, 358, 474, 557, 659, 790, 2035
BclI	TGATCA	3 cut(s)	394, 1183, 1486
BcoDI	GTCTC	4 cut(s)	471, 971, 1653, 2061
BfaI	CTAG	4 cut(s)	308, 632, 1997, 2073
BfmI	CTRYAG	5 cut(s)	74, 961, 1309, 1636, 1944
BisI	GCNGC	3 cut(s)	42, 74, 1500
BlpI	GCTNAGC	1 cut(s)	809
BlsI	GCNGC	3 cut(s)	43, 75, 1501
Bme1390I	CCNGG	7 cut(s)	165, 358, 474, 557, 659, 790, 2035
Bme18I	GGWCC	2 cut(s)	466, 1669
BmeRI	GACNNNNNGTC	1 cut(s)	613
BmeT110I	CYCGRG	1 cut(s)	1067
BmgBI	CACGTC	1 cut(s)	284
BmgT120I	GGNCC	3 cut(s)	466, 1157, 1669
BmiI	GGNNCC	4 cut(s)	251, 330, 579, 688
BmrFI	CCNGG	7 cut(s)	165, 358, 474, 557, 659, 790, 2035
BmsI	GCATC	3 cut(s)	22, 671, 1645
BpiI	GAAGAC	3 cut(s)	278, 717, 1037
BplI	GAGNNNNNCTC	2 cut(s)	2084, 2116
BpmI	CTGGAG	4 cut(s)	324, 495, 641, 1752
Bpu1102I	GCTNAGC	1 cut(s)	809
BpuEI	CTTGAG	4 cut(s)	177, 229, 1994, 2136
BsaAI	YACGTR	1 cut(s)	29
BsaBI	GATNNNNATC	1 cut(s)	217
BsaJI	CCNNGG	6 cut(s)	357, 555, 581, 1792, 2005, 2033
BsaWI	WCCGGW	1 cut(s)	2191
BsaXI	ACNNNNNCTCC	6 cut(s)	468, 498, 1276, 1306, 1864, 1894
Bsc4I	CCNNNNNNNGG	2 cut(s)	237, 1007
Bse1I	ACTGG	4 cut(s)	688, 953, 1814, 2213
Bse21I	CCTNAGG	1 cut(s)	2088
Bse3DI	GCAATG	1 cut(s)	1521
Bse8I	GATNNNNATC	1 cut(s)	217
BseAI	TCCGGA	1 cut(s)	2191
BseBI	CCWGG	7 cut(s)	165, 358, 474, 557, 659, 790, 2035
BseDI	CCNNGG	6 cut(s)	357, 555, 581, 1792, 2005, 2033
BseGI	GGATG	6 cut(s)	160, 617, 662, 1114, 1186, 2029
BseJI	GATNNNNATC	1 cut(s)	217
BseLI	CCNNNNNNNGG	2 cut(s)	237, 1007
BseMI	GCAATG	1 cut(s)	1521
BseMII	CTCAG	8 cut(s)	440, 823, 825, 861, 1016, 1190, 2102, 2145
BseNI	ACTGG	4 cut(s)	688, 953, 1814, 2213
BseRI	GAGGAG	1 cut(s)	2139
BseXI	GCAGC	3 cut(s)	28, 60, 1486
BseYI	CCCAGC	1 cut(s)	1801
BshFI	GGCC	6 cut(s)	181, 882, 1158, 1538, 1725, 1791
BsiHKAI	GWGCWC	1 cut(s)	2149
BsiHKCI	CYCGRG	1 cut(s)	1067
BsiSI	CCGG	1 cut(s)	2192
BslFI	GGGAC	2 cut(s)	1692, 1926
BslI	CCNNNNNNNGG	2 cut(s)	237, 1007
BsmAI	GTCTC	4 cut(s)	471, 971, 1653, 2061
BsmFI	GGGAC	2 cut(s)	1692, 1926
BsnI	GGCC	6 cut(s)	181, 882, 1158, 1538, 1725, 1791
BsoBI	CYCGRG	1 cut(s)	1067
Bsp1286I	GDGCHC	1 cut(s)	2149
Bsp13I	TCCGGA	1 cut(s)	2191
Bsp1407I	TGTACA	2 cut(s)	894, 1583
Bsp1720I	GCTNAGC	1 cut(s)	809
Bsp19I	CCATGG	1 cut(s)	1792
BspACI	CCGC	1 cut(s)	335
BspANI	GGCC	6 cut(s)	181, 882, 1158, 1538, 1725, 1791
BspCNI	CTCAG	8 cut(s)	439, 822, 826, 860, 1015, 1189, 2101, 2144
BspEI	TCCGGA	1 cut(s)	2191
BspLI	GGNNCC	4 cut(s)	251, 330, 579, 688
BspMAI	CTGCAG	4 cut(s)	78, 965, 1313, 1948
BspPI	GGATC	7 cut(s)	17, 220, 786, 1206, 1334, 1434, 1620
BsrDI	GCAATG	1 cut(s)	1521
BsrGI	TGTACA	2 cut(s)	894, 1583
BsrI	ACTGG	4 cut(s)	688, 953, 1814, 2213
BssECI	CCNNGG	6 cut(s)	357, 555, 581, 1792, 2005, 2033
BssT1I	CCWWGG	2 cut(s)	1792, 2005
Bst2UI	CCWGG	7 cut(s)	165, 358, 474, 557, 659, 790, 2035
Bst4CI	ACNGT	4 cut(s)	106, 615, 928, 1569
Bst6I	CTCTTC	3 cut(s)	360, 410, 700
BstAPI	GCANNNNNTGC	2 cut(s)	50, 1904
BstAUI	TGTACA	2 cut(s)	894, 1583
BstBAI	YACGTR	1 cut(s)	29
BstC8I	GCNNGC	3 cut(s)	384, 452, 1269
BstDEI	CTNAG	9 cut(s)	426, 809, 834, 847, 1002, 1176, 1355, 2088, 2131
BstDSI	CCRYGG	1 cut(s)	1792
BstF5I	GGATG	6 cut(s)	160, 617, 662, 1114, 1186, 2029
BstMAI	GTCTC	4 cut(s)	471, 971, 1653, 2061
BstMWI	GCNNNNNNNGC	4 cut(s)	41, 50, 1050, 1904
BstNI	CCWGG	7 cut(s)	165, 358, 474, 557, 659, 790, 2035
BstNSI	RCATGY	4 cut(s)	122, 454, 1499, 1521
BstSCI	CCNGG	7 cut(s)	163, 356, 472, 555, 657, 788, 2033
BstSFI	CTRYAG	5 cut(s)	74, 961, 1309, 1636, 1944
BstV1I	GCAGC	3 cut(s)	28, 60, 1486
BstV2I	GAAGAC	3 cut(s)	278, 717, 1037
BstX2I	RGATCY	5 cut(s)	22, 778, 1339, 1426, 1612
BstXI	CCANNNNNNTGG	1 cut(s)	1809
BstYI	RGATCY	5 cut(s)	22, 778, 1339, 1426, 1612
Bsu36I	CCTNAGG	1 cut(s)	2088
BsuRI	GGCC	6 cut(s)	181, 882, 1158, 1538, 1725, 1791
BtgI	CCRYGG	1 cut(s)	1792
BtrI	CACGTC	1 cut(s)	284
BtsCI	GGATG	6 cut(s)	160, 617, 662, 1114, 1186, 2029
BtsI	GCAGTG	2 cut(s)	535, 1318
BtsIMutI	CAGTG	6 cut(s)	111, 434, 535, 681, 780, 1318
Cac8I	GCNNGC	3 cut(s)	384, 452, 1269
CaiI	CAGNNNCTG	1 cut(s)	1100
Cfr13I	GGNCC	3 cut(s)	466, 1157, 1669
CseI	GACGC	1 cut(s)	941
Csp6I	GTAC	4 cut(s)	90, 158, 895, 1584
CspCI	CAANNNNNGTGG	2 cut(s)	1465, 1500
CviQI	GTAC	4 cut(s)	90, 158, 895, 1584
DdeI	CTNAG	9 cut(s)	426, 809, 834, 847, 1002, 1176, 1355, 2088, 2131
DriI	GACNNNNNGTC	1 cut(s)	613
EaeI	YGGCCR	2 cut(s)	179, 1723
Eam1104I	CTCTTC	3 cut(s)	360, 410, 700
Eam1105I	GACNNNNNGTC	1 cut(s)	613
EarI	CTCTTC	3 cut(s)	360, 410, 700
EciI	GGCGGA	1 cut(s)	324
Eco130I	CCWWGG	2 cut(s)	1792, 2005
Eco147I	AGGCCT	1 cut(s)	882
Eco32I	GATATC	1 cut(s)	1891
Eco47I	GGWCC	2 cut(s)	466, 1669
Eco57I	CTGAAG	3 cut(s)	391, 1434, 1684
Eco72I	CACGTG	1 cut(s)	29
Eco81I	CCTNAGG	1 cut(s)	2088
Eco88I	CYCGRG	1 cut(s)	1067
EcoRI	GAATTC	1 cut(s)	723
EcoRII	CCWGG	7 cut(s)	163, 356, 472, 555, 657, 788, 2033
EcoRV	GATATC	1 cut(s)	1891
EcoT14I	CCWWGG	2 cut(s)	1792, 2005
EcoT22I	ATGCAT	2 cut(s)	1523, 1660
ErhI	CCWWGG	2 cut(s)	1792, 2005
FalI	AAGNNNNNCTT	4 cut(s)	1251, 1283, 2166, 2198
FaqI	GGGAC	2 cut(s)	1692, 1926
FbaI	TGATCA	3 cut(s)	394, 1183, 1486
FblI	GTMKAC	1 cut(s)	1695
Fnu4HI	GCNGC	3 cut(s)	42, 74, 1500
FokI	GGATG	6 cut(s)	147, 604, 649, 1121, 1193, 2016
Fsp4HI	GCNGC	3 cut(s)	42, 74, 1500
FspBI	CTAG	4 cut(s)	308, 632, 1997, 2073
GluI	GCNGC	3 cut(s)	42, 74, 1500
GsaI	CCCAGC	1 cut(s)	1805
GsuI	CTGGAG	4 cut(s)	324, 495, 641, 1752
HaeIII	GGCC	6 cut(s)	181, 882, 1158, 1538, 1725, 1791
HapII	CCGG	1 cut(s)	2192
HgaI	GACGC	1 cut(s)	941
HincII	GTYRAC	2 cut(s)	795, 931
HindII	GTYRAC	2 cut(s)	795, 931
HindIII	AAGCTT	1 cut(s)	1169
HinfI	GANTC	9 cut(s)	56, 218, 422, 824, 1145, 1223, 1824, 2015, 2069
HpaII	CCGG	1 cut(s)	2192
HphI	GGTGA	6 cut(s)	512, 518, 670, 1004, 1862, 2089
Hpy166II	GTNNAC	3 cut(s)	795, 931, 1696
Hpy8I	GTNNAC	3 cut(s)	795, 931, 1696
HpyAV	CCTTC	8 cut(s)	234, 497, 872, 901, 1375, 1417, 1458, 1903
HpyCH4III	ACNGT	4 cut(s)	106, 615, 928, 1569
HpyCH4IV	ACGT	3 cut(s)	28, 283, 1629
HpyF10VI	GCNNNNNNNGC	4 cut(s)	41, 50, 1050, 1904
HpyF3I	CTNAG	9 cut(s)	426, 809, 834, 847, 1002, 1176, 1355, 2088, 2131
HpySE526I	ACGT	3 cut(s)	28, 283, 1629
Kpn2I	TCCGGA	1 cut(s)	2191
Ksp22I	TGATCA	3 cut(s)	394, 1183, 1486
LmnI	GCTCC	2 cut(s)	1771, 2152
Lsp1109I	GCAGC	3 cut(s)	28, 60, 1486
LweI	GCATC	3 cut(s)	22, 671, 1645
MaeI	CTAG	4 cut(s)	308, 632, 1997, 2073
MaeII	ACGT	3 cut(s)	28, 283, 1629
MaeIII	GTNAC	7 cut(s)	205, 506, 676, 1842, 1968, 2126, 2163
MfeI	CAATTG	2 cut(s)	45, 861
MflI	RGATCY	5 cut(s)	22, 778, 1339, 1426, 1612
MhlI	GDGCHC	1 cut(s)	2149
MlsI	TGGCCA	1 cut(s)	1725
MluNI	TGGCCA	1 cut(s)	1725
MlyI	GAGTC	3 cut(s)	416, 1833, 2063
MmeI	TCCRAC	1 cut(s)	1647
Mox20I	TGGCCA	1 cut(s)	1725
Mph1103I	ATGCAT	2 cut(s)	1523, 1660
MroI	TCCGGA	1 cut(s)	2191
MroXI	GAANNNNTTC	1 cut(s)	714
MscI	TGGCCA	1 cut(s)	1725
MseI	TTAA	9 cut(s)	701, 1089, 1217, 1230, 1334, 1415, 1661, 1920, 2022
MslI	CAYNNNNRTG	2 cut(s)	123, 2133
Msp20I	TGGCCA	1 cut(s)	1725
MspA1I	CMGCKG	2 cut(s)	605, 1805
MspI	CCGG	1 cut(s)	2192
MspR9I	CCNGG	7 cut(s)	165, 358, 474, 557, 659, 790, 2035
MunI	CAATTG	2 cut(s)	45, 861
MvaI	CCWGG	7 cut(s)	165, 358, 474, 557, 659, 790, 2035
MwoI	GCNNNNNNNGC	4 cut(s)	41, 50, 1050, 1904
NcoI	CCATGG	1 cut(s)	1792
NlaIV	GGNNCC	4 cut(s)	251, 330, 579, 688
NmuCI	GTSAC	4 cut(s)	506, 676, 2126, 2163
NsiI	ATGCAT	2 cut(s)	1523, 1660
NspI	RCATGY	4 cut(s)	122, 454, 1499, 1521
PaeI	GCATGC	1 cut(s)	454
PceI	AGGCCT	1 cut(s)	882
PdmI	GAANNNNTTC	1 cut(s)	714
PfeI	GAWTC	6 cut(s)	56, 218, 824, 1145, 1223, 2015
PflMI	CCANNNNNTGG	1 cut(s)	237
PkrI	GCNGC	3 cut(s)	43, 75, 1501
PleI	GAGTC	3 cut(s)	416, 1832, 2063
PmaCI	CACGTG	1 cut(s)	29
PmlI	CACGTG	1 cut(s)	29
PpsI	GAGTC	3 cut(s)	416, 1832, 2063
Ppu21I	YACGTR	1 cut(s)	29
PshBI	ATTAAT	1 cut(s)	1661
PsiI	TTATAA	1 cut(s)	63
Psp1406I	AACGTT	1 cut(s)	1629
Psp6I	CCWGG	7 cut(s)	163, 356, 472, 555, 657, 788, 2033
PspCI	CACGTG	1 cut(s)	29
PspFI	CCCAGC	1 cut(s)	1801
PspGI	CCWGG	7 cut(s)	163, 356, 472, 555, 657, 788, 2033
PspN4I	GGNNCC	4 cut(s)	251, 330, 579, 688
PspPI	GGNCC	3 cut(s)	466, 1157, 1669
PstI	CTGCAG	4 cut(s)	78, 965, 1313, 1948
PstNI	CAGNNNCTG	1 cut(s)	1100
PsuI	RGATCY	5 cut(s)	22, 778, 1339, 1426, 1612
PvuII	CAGCTG	2 cut(s)	605, 1805
RsaI	GTAC	4 cut(s)	91, 159, 896, 1585
RsaNI	GTAC	4 cut(s)	90, 158, 895, 1584
RseI	CAYNNNNRTG	2 cut(s)	123, 2133
SaqAI	TTAA	9 cut(s)	701, 1089, 1217, 1230, 1334, 1415, 1661, 1920, 2022
SatI	GCNGC	3 cut(s)	42, 74, 1500
Sau96I	GGNCC	3 cut(s)	466, 1157, 1669
SchI	GAGTC	3 cut(s)	416, 1833, 2063
ScrFI	CCNGG	7 cut(s)	165, 358, 474, 557, 659, 790, 2035
SduI	GDGCHC	1 cut(s)	2149
SfaNI	GCATC	3 cut(s)	22, 671, 1645
SfcI	CTRYAG	5 cut(s)	74, 961, 1309, 1636, 1944
SinI	GGWCC	2 cut(s)	466, 1669
SmiMI	CAYNNNNRTG	2 cut(s)	123, 2133
SmlI	CTYRAG	4 cut(s)	192, 244, 1973, 2151
SmoI	CTYRAG	4 cut(s)	192, 244, 1973, 2151
SphI	GCATGC	1 cut(s)	454
SseBI	AGGCCT	1 cut(s)	882
SsiI	CCGC	1 cut(s)	335
SspI	AATATT	1 cut(s)	801
SspMI	CTAG	4 cut(s)	308, 632, 1997, 2073
StuI	AGGCCT	1 cut(s)	882
StyD4I	CCNGG	7 cut(s)	163, 356, 472, 555, 657, 788, 2033
StyI	CCWWGG	2 cut(s)	1792, 2005
TaaI	ACNGT	4 cut(s)	106, 615, 928, 1569
TaiI	ACGT	3 cut(s)	31, 286, 1632
TaqI	TCGA	3 cut(s)	769, 1541, 2040
TatI	WGTACW	3 cut(s)	157, 894, 1583
TfiI	GAWTC	6 cut(s)	56, 218, 824, 1145, 1223, 2015
Tru1I	TTAA	9 cut(s)	701, 1089, 1217, 1230, 1334, 1415, 1661, 1920, 2022
Tru9I	TTAA	9 cut(s)	701, 1089, 1217, 1230, 1334, 1415, 1661, 1920, 2022
TscAI	CASTG	6 cut(s)	111, 434, 535, 688, 780, 1318
TseFI	GTSAC	4 cut(s)	506, 676, 2126, 2163
TseI	GCWGC	3 cut(s)	41, 73, 1499
Tsp45I	GTSAC	4 cut(s)	506, 676, 2126, 2163
TspDTI	ATGAA	7 cut(s)	96, 831, 891, 1578, 1828, 1998, 2187
TspGWI	ACGGA	3 cut(s)	585, 655, 2151
TspRI	CASTG	6 cut(s)	111, 434, 535, 688, 780, 1318
Van91I	CCANNNNNTGG	1 cut(s)	237
VpaK11BI	GGWCC	2 cut(s)	466, 1669
VspI	ATTAAT	1 cut(s)	1661
XapI	RAATTY	5 cut(s)	301, 536, 723, 1139, 1348
XbaI	TCTAGA	1 cut(s)	307
XceI	RCATGY	4 cut(s)	122, 454, 1499, 1521
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1809
XmiI	GTMKAC	1 cut(s)	1695
XmnI	GAANNNNTTC	1 cut(s)	714
XspI	CTAG	4 cut(s)	308, 632, 1997, 2073
Zsp2I	ATGCAT	2 cut(s)	1523, 1660

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.