Rmu_ssc0000460.1_g000031

Thaumatin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000460.1
OG0011405
Physical Location & Seq
Forward (+)
132419 .. 139267
6849 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000460.1_g000031.1.cds

Sequence Viewer

Length: 1950 bp
atggctcaactgggaagactgctggtaaggcaatgcccggcgttgcagcaccactgctgctcctgcgtcacactcaatcatctcttcttctcaacctcatttccactaagcacaaaccctaattcccgccgctcttcttccccggtaatctacttagctactcgcggcgtccataaactagtccgcggactccgaccgcgcgacgctcctccggcaccgtccgatctcgacggtaacagcagcggttccgattcggagtcgtcgattacatataagagccgcaacgccttgaaacgcgacgctcggcgcgccgtccggtgggctatggacctcgcgttcttctctacacctcagctcaaattgattatcagagtggcttctctggaccaagacgtattggatgctgttatgttagtgaagagatttgggaatgatgtgcgagaaggaaagcgaaggcagttcaattatattgcaaaattgctacgagatgcggaccctgagttgatggatgctttgattcgcgctacaaaagattgcgaccaaaagaagttgcaagatttatgtggttcggaggcgttgatcattgacgatgaggaagaagaagaagaagaagaagctgaagaatctgataacgaggaagaagagggttctcacattgatgtagcaaccagatgggttgagggtatgatcaataaggacactaatatcaccaatgaagtttattcaatttcaaatgttgagtttgaccgtcaggaattgcggaaactggttcggaaagtacattcagctttggaacgctcaagcaattctgaggaaaataaggaaaagattgatgaagcggacaccacccaccaccacttgacatttcctcctccattctcgatcaccagccagctagctaccagcagagctcaaatggctcctccattaacacccttctcgctctctctattaacccttctcggtctattaacatcaggggcgctgtcaacgacattcacaatggtaaacaaatgcgagtacacagtgtggccgggcattctctccaacgccggcgttccgcctcttccgaccaccggcttcgccctccagaaaagcgagaccaagaccctaaccgcccccgcctcctggggcggccgcttctggggccgaaccctctgcacccacgactccaccggaaaattctcctgtgtcaccggcgattgcggctccggaaagctagaatgctccggaagcggcgctgcccctcccgcaactctcgccgagttcaccttagacggtgccggcggccttgacttctttgacgtcagcctcgtcgacggttacaacctccctatgctggtggttccccagggtgggaccggcaccaattgtaccaacaccggctgcgtggtcgaccttaacggcgtttgtccgtcggagctcaaggtgactagcgctgccggaagcgaaggcgtcgcgtgcaagagcgcgtgcgaggcgtttcagcagccgcagtactgttgcagcggcgcgtacgctacacccgacacgtgcaagccttcttcctactcgcaaatattcaagaacgcgtgccctcaagcgtacagttacgcatacgacgataagaccagcaccttcacatgcgccgatgccgattacaccatcaccttctgtccctctccgaacaccagtcagaaagcatcgcaagggcaaaccacccagccggctcagactagcaactcgccggagattaacagtacaatggtgtatgaaggctccgatgacggaagcgaagcatggtcgtcgtccacatccgtccacgtgttctcatcacatgcagccgcggcagccgtcagcgtcacggcaatgggccatgtgatattgggtcccacattgtgcccgtctgacgcggattcgagtcaggcaggatgggtaaagcccacccacccggcagctactactggttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Thaumatin

Protein Analysis

649

Amino Acids

69.85

Weight (kDa)

5.12

Isoelectric Point (pI)

52.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011405)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G24175 AT4G24175
fragaria_vesca FvH4_2g38330
malus_domestica MD08G1011800.v1.1 MD08G1012000.v1.1
prunus_persica Prupe.1G364300_v2.0.a1
pyrus_communis pycom08g01020 pycom08g01050 pycom15g00990
rosa_chinensis RchiOBHm_Chr6g0303031
rosa_laevigata RLG00000011114
rosa_multiflora Rmu_ssc0000460.1_g000031
rosa_roxburghii Rroxscaffold_7G00165100
rosa_rugosa Rorug06G0318800.1 Rorug06G0318900.1
rosa_samantha Rh6AG432400 Rh6BG470200 Rh6CG444800 Rh6DG431500
rosa_wichuraiana Rw6G037480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1308
AccB1I GGYRCC 3 cut(s) 214, 1280, 1364
AccBSI CCGCTC 1 cut(s) 132
AccI GTMKAC 2 cut(s) 1317, 1395
AccIII TCCGGA 2 cut(s) 1211, 1229
AcoI YGGCCR 2 cut(s) 1031, 1135
AcsI RAATTY 1 cut(s) 1181
AcuI CTGAAG 1 cut(s) 639
AcvI CACGTG 2 cut(s) 1533, 1804
AcyI GRCGYC 3 cut(s) 168, 1305, 1455
AdeI CACNNNGTG 2 cut(s) 1029, 1878
AfaI GTAC 7 cut(s) 780, 1022, 1375, 1499, 1517, 1586, 1741
AfeI AGCGCT 1 cut(s) 1438
AfiI CCNNNNNNNGG 7 cut(s) 318, 1076, 1128, 1144, 1339, 1355, 1356
AflIII ACRYGT 3 cut(s) 1530, 1569, 1803
AgsI TTSAA 5 cut(s) 292, 463, 726, 732, 1564
AhlI ACTAGT 1 cut(s) 178
AjnI CCWGG 2 cut(s) 1127, 1350
AloI GAACNNNNNNTCC 2 cut(s) 320, 352
Alw21I GWGCWC 2 cut(s) 913, 1425
Alw26I GTCTC 1 cut(s) 1094
Aor13HI TCCGGA 2 cut(s) 1211, 1229
Aor51HI AGCGCT 1 cut(s) 1438
AoxI GGCC 5 cut(s) 1031, 1135, 1147, 1288, 1852
ApoI RAATTY 1 cut(s) 1181
AscI GGCGCGCC 1 cut(s) 307
AspS9I GGNCC 7 cut(s) 328, 385, 493, 1147, 1359, 1852, 1868
AsuC2I CCSGG 4 cut(s) 38, 143, 1035, 1931
AsuHPI GGTGA 6 cut(s) 700, 877, 1186, 1261, 1441, 1639
AsuNHI GCTAGC 1 cut(s) 895
AvaII GGWCC 5 cut(s) 328, 385, 493, 1359, 1868
BaeGI GKGCMC 2 cut(s) 1577, 1883
BanI GGYRCC 3 cut(s) 214, 1280, 1364
BanII GRGCYC 2 cut(s) 913, 1425
BbrPI CACGTG 2 cut(s) 1533, 1804
BbsI GAAGAC 1 cut(s) 22
Bbv12I GWGCWC 2 cut(s) 913, 1425
BbvCI CCTCAGC 1 cut(s) 351
BccI CCATC 4 cut(s) 499, 666, 1652, 1905
BceAI ACGGC 4 cut(s) 296, 1420, 1817, 1860
BcgI CGANNNNNNTGC 4 cut(s) 1140, 1174, 1767, 1801
BciT130I CCWGG 2 cut(s) 1129, 1352
BclI TGATCA 2 cut(s) 579, 687
BcnI CCSGG 4 cut(s) 38, 143, 1035, 1931
BcoDI GTCTC 1 cut(s) 1094
BcuI ACTAGT 1 cut(s) 178
BfaI CTAG 5 cut(s) 179, 896, 1220, 1434, 1716
BfoI RGCGCY 3 cut(s) 986, 1242, 1440
BmcAI AGTACT 1 cut(s) 1499
Bme1390I CCNGG 6 cut(s) 38, 143, 1035, 1129, 1352, 1931
Bme18I GGWCC 5 cut(s) 328, 385, 493, 1359, 1868
BmgT120I GGNCC 7 cut(s) 328, 385, 493, 1147, 1359, 1852, 1868
BmrFI CCNGG 6 cut(s) 38, 143, 1035, 1129, 1352, 1931
BmrI ACTGGG 1 cut(s) 20
BmsI GCATC 5 cut(s) 391, 478, 499, 1621, 1691
BmtI GCTAGC 1 cut(s) 899
BmuI ACTGGG 1 cut(s) 20
BpiI GAAGAC 1 cut(s) 22
BpmI CTGGAG 1 cut(s) 1073
Bpu10I CCTNAGC 1 cut(s) 351
BpuEI CTTGAG 3 cut(s) 784, 1409, 1563
BpuMI CCSGG 4 cut(s) 38, 143, 1035, 1931
BsaAI YACGTR 2 cut(s) 1533, 1804
BsaHI GRCGYC 3 cut(s) 168, 1305, 1455
BsaI GGTCTC 1 cut(s) 1094
BsaJI CCNNGG 6 cut(s) 141, 184, 1128, 1350, 1351, 1824
BsaWI WCCGGW 4 cut(s) 315, 1175, 1211, 1229
BsaXI ACNNNNNCTCC 4 cut(s) 44, 74, 853, 883
Bsc4I CCNNNNNNNGG 7 cut(s) 318, 1076, 1128, 1144, 1339, 1355, 1356
Bse118I RCCGGY 7 cut(s) 1052, 1076, 1196, 1283, 1361, 1382, 1705
Bse1I ACTGG 4 cut(s) 15, 771, 1671, 1948
Bse3DI GCAATG 2 cut(s) 38, 1854
BseAI TCCGGA 2 cut(s) 1211, 1229
BseBI CCWGG 2 cut(s) 1129, 1352
BseDI CCNNGG 6 cut(s) 141, 184, 1128, 1350, 1351, 1824
BseGI GGATG 4 cut(s) 406, 514, 1793, 1916
BseLI CCNNNNNNNGG 7 cut(s) 318, 1076, 1128, 1144, 1339, 1355, 1356
BseMI GCAATG 2 cut(s) 38, 1854
BseMII CTCAG 4 cut(s) 365, 489, 801, 1724
BseNI ACTGG 4 cut(s) 15, 771, 1671, 1948
BsePI GCGCGC 1 cut(s) 307
BseRI GAGGAG 3 cut(s) 198, 861, 912
BseSI GKGCMC 2 cut(s) 1577, 1883
BseX3I CGGCCG 1 cut(s) 1135
BseYI CCCAGC 1 cut(s) 1701
BsgI GTGCAG 1 cut(s) 1144
Bsh1285I CGRYCG 2 cut(s) 197, 1138
BshFI GGCC 5 cut(s) 1033, 1137, 1149, 1290, 1854
BshNI GGYRCC 3 cut(s) 214, 1280, 1364
BsiEI CGRYCG 2 cut(s) 197, 1138
BsiHKAI GWGCWC 2 cut(s) 913, 1425
BsiWI CGTACG 1 cut(s) 1515
BslFI GGGAC 3 cut(s) 1372, 1641, 1854
BslI CCNNNNNNNGG 7 cut(s) 318, 1076, 1128, 1144, 1339, 1355, 1356
BsmAI GTCTC 1 cut(s) 1094
BsmFI GGGAC 3 cut(s) 1372, 1641, 1854
BsmI GAATGC 2 cut(s) 1038, 1229
BsnI GGCC 5 cut(s) 1033, 1137, 1149, 1290, 1854
Bso31I GGTCTC 1 cut(s) 1094
Bsp1286I GDGCHC 4 cut(s) 913, 1425, 1577, 1883
Bsp13I TCCGGA 2 cut(s) 1211, 1229
Bsp143I GATC 4 cut(s) 223, 579, 687, 882
BspANI GGCC 5 cut(s) 1033, 1137, 1149, 1290, 1854
BspCNI CTCAG 4 cut(s) 364, 490, 802, 1723
BspEI TCCGGA 2 cut(s) 1211, 1229
BspOI GCTAGC 1 cut(s) 899
BspQI GCTCTTC 1 cut(s) 139
BspT107I GGYRCC 3 cut(s) 214, 1280, 1364
BspTNI GGTCTC 1 cut(s) 1094
BsrBI CCGCTC 1 cut(s) 132
BsrDI GCAATG 2 cut(s) 38, 1854
BsrFI RCCGGY 7 cut(s) 1052, 1076, 1196, 1283, 1361, 1382, 1705
BsrI ACTGG 4 cut(s) 15, 771, 1671, 1948
BssAI RCCGGY 7 cut(s) 1052, 1076, 1196, 1283, 1361, 1382, 1705
BssECI CCNNGG 6 cut(s) 141, 184, 1128, 1350, 1351, 1824
BssHII GCGCGC 1 cut(s) 307
BssMI GATC 4 cut(s) 223, 579, 687, 882
BssNI GRCGYC 3 cut(s) 168, 1305, 1455
Bst2UI CCWGG 2 cut(s) 1129, 1352
Bst4CI ACNGT 9 cut(s) 219, 233, 749, 1027, 1280, 1322, 1502, 1589, 1739
Bst6I CTCTTC 5 cut(s) 89, 139, 413, 636, 1071
BstACI GRCGYC 3 cut(s) 168, 1305, 1455
BstBAI YACGTR 2 cut(s) 1533, 1804
BstDEI CTNAG 7 cut(s) 107, 154, 351, 498, 810, 1273, 1710
BstDSI CCRYGG 2 cut(s) 184, 1824
BstF5I GGATG 4 cut(s) 406, 514, 1793, 1916
BstH2I RGCGCY 3 cut(s) 986, 1242, 1440
BstKTI GATC 4 cut(s) 226, 582, 690, 885
BstMAI GTCTC 1 cut(s) 1094
BstMBI GATC 4 cut(s) 223, 579, 687, 882
BstMCI CGRYCG 2 cut(s) 197, 1138
BstNI CCWGG 2 cut(s) 1129, 1352
BstNSI RCATGY 2 cut(s) 1626, 1820
BstSCI CCNGG 6 cut(s) 36, 141, 1033, 1127, 1350, 1929
BstSLI GKGCMC 2 cut(s) 1577, 1883
BstV2I GAAGAC 1 cut(s) 22
BstZI CGGCCG 1 cut(s) 1135
BsuRI GGCC 5 cut(s) 1033, 1137, 1149, 1290, 1854
BtgI CCRYGG 2 cut(s) 184, 1824
BtgZI GCGATG 1 cut(s) 1668
BtsCI GGATG 4 cut(s) 406, 514, 1793, 1916
BtsI GCAGTG 1 cut(s) 52
BtsIMutI CAGTG 2 cut(s) 52, 1032
CciNI GCGGCCGC 1 cut(s) 1135
Cfr10I RCCGGY 7 cut(s) 1052, 1076, 1196, 1283, 1361, 1382, 1705
Cfr13I GGNCC 7 cut(s) 328, 385, 493, 1147, 1359, 1852, 1868
Cfr42I CCGCGG 2 cut(s) 187, 1827
CseI GACGC 7 cut(s) 55, 157, 212, 308, 1444, 1828, 1898
Csp6I GTAC 7 cut(s) 779, 1021, 1374, 1498, 1516, 1585, 1740
CviAII CATG 4 cut(s) 1623, 1779, 1817, 1856
CviQI GTAC 7 cut(s) 779, 1021, 1374, 1498, 1516, 1585, 1740
DdeI CTNAG 7 cut(s) 107, 154, 351, 498, 810, 1273, 1710
DpnI GATC 4 cut(s) 225, 581, 689, 884
DpnII GATC 4 cut(s) 223, 579, 687, 882
DraIII CACNNNGTG 2 cut(s) 1029, 1878
EaeI YGGCCR 2 cut(s) 1031, 1135
EagI CGGCCG 1 cut(s) 1135
Eam1104I CTCTTC 5 cut(s) 89, 139, 413, 636, 1071
EarI CTCTTC 5 cut(s) 89, 139, 413, 636, 1071
EciI GGCGGA 1 cut(s) 1050
Ecl136II GAGCTC 2 cut(s) 911, 1423
EclXI CGGCCG 1 cut(s) 1135
Eco24I GRGCYC 2 cut(s) 913, 1425
Eco31I GGTCTC 1 cut(s) 1094
Eco47I GGWCC 5 cut(s) 328, 385, 493, 1359, 1868
Eco47III AGCGCT 1 cut(s) 1438
Eco52I CGGCCG 1 cut(s) 1135
Eco53kI GAGCTC 2 cut(s) 911, 1423
Eco57I CTGAAG 1 cut(s) 639
Eco72I CACGTG 2 cut(s) 1533, 1804
EcoICRI GAGCTC 2 cut(s) 911, 1423
EcoO109I RGGNCCY 1 cut(s) 1868
EcoRII CCWGG 2 cut(s) 1127, 1350
EcoT38I GRGCYC 2 cut(s) 913, 1425
FaeI CATG 4 cut(s) 1626, 1782, 1820, 1859
FaqI GGGAC 3 cut(s) 1372, 1641, 1854
FatI CATG 4 cut(s) 1622, 1778, 1816, 1855
FauI CCCGC 3 cut(s) 134, 1129, 1258
FbaI TGATCA 2 cut(s) 579, 687
FblI GTMKAC 2 cut(s) 1317, 1395
FokI GGATG 4 cut(s) 413, 521, 1780, 1923
FriOI GRGCYC 2 cut(s) 913, 1425
FspBI CTAG 5 cut(s) 179, 896, 1220, 1434, 1716
GsaI CCCAGC 1 cut(s) 1705
GsuI CTGGAG 1 cut(s) 1073
HaeII RGCGCY 3 cut(s) 986, 1242, 1440
HaeIII GGCC 5 cut(s) 1033, 1137, 1149, 1290, 1854
HgaI GACGC 7 cut(s) 55, 157, 212, 308, 1444, 1828, 1898
Hin1I GRCGYC 3 cut(s) 168, 1305, 1455
Hin1II CATG 4 cut(s) 1626, 1782, 1820, 1859
HincII GTYRAC 3 cut(s) 990, 1318, 1396
HindII GTYRAC 3 cut(s) 990, 1318, 1396
HinfI GANTC 8 cut(s) 189, 251, 257, 517, 623, 1169, 1895, 1900
HphI GGTGA 6 cut(s) 700, 877, 1186, 1261, 1441, 1639
Hpy166II GTNNAC 8 cut(s) 990, 1009, 1023, 1269, 1318, 1396, 1791, 1801
Hpy188III TCNNGA 8 cut(s) 227, 383, 752, 880, 1090, 1212, 1230, 1564
Hpy8I GTNNAC 8 cut(s) 990, 1009, 1023, 1269, 1318, 1396, 1791, 1801
HpyAV CCTTC 9 cut(s) 437, 447, 946, 968, 1445, 1551, 1627, 1660, 1748
HpyCH4III ACNGT 9 cut(s) 219, 233, 749, 1027, 1280, 1322, 1502, 1589, 1739
HpyCH4IV ACGT 4 cut(s) 393, 1305, 1532, 1803
HpyCH4V TGCA 8 cut(s) 46, 473, 553, 1161, 1464, 1506, 1536, 1820
HpyF3I CTNAG 7 cut(s) 107, 154, 351, 498, 810, 1273, 1710
HpySE526I ACGT 4 cut(s) 393, 1305, 1532, 1803
Hsp92I GRCGYC 3 cut(s) 168, 1305, 1455
Hsp92II CATG 4 cut(s) 1626, 1782, 1820, 1859
KflI GGGWCCC 1 cut(s) 1868
Kpn2I TCCGGA 2 cut(s) 1211, 1229
KroI GCCGGC 3 cut(s) 1052, 1283, 1705
KroNI GCCGGC 3 cut(s) 1054, 1285, 1707
Ksp22I TGATCA 2 cut(s) 579, 687
KspI CCGCGG 2 cut(s) 187, 1827
Kzo9I GATC 4 cut(s) 223, 579, 687, 882
LguI GCTCTTC 1 cut(s) 139
LmnI GCTCC 7 cut(s) 65, 211, 925, 1214, 1232, 1420, 1763
LweI GCATC 5 cut(s) 391, 478, 499, 1621, 1691
MaeI CTAG 5 cut(s) 179, 896, 1220, 1434, 1716
MaeII ACGT 4 cut(s) 393, 1305, 1532, 1803
MaeIII GTNAC 7 cut(s) 67, 233, 1192, 1322, 1429, 1589, 1840
MalI GATC 4 cut(s) 225, 581, 689, 884
MbiI CCGCTC 1 cut(s) 132
MboI GATC 4 cut(s) 223, 579, 687, 882
MfeI CAATTG 1 cut(s) 1369
MhlI GDGCHC 4 cut(s) 913, 1425, 1577, 1883
MluCI AATT 9 cut(s) 121, 359, 463, 476, 726, 755, 805, 1181, 1369
MluI ACGCGT 1 cut(s) 1569
MlyI GAGTC 4 cut(s) 183, 266, 1163, 1909
MmeI TCCRAC 4 cut(s) 217, 1071, 1094, 1398
MreI CGCCGGCG 1 cut(s) 1052
MroI TCCGGA 2 cut(s) 1211, 1229
MroNI GCCGGC 3 cut(s) 1052, 1283, 1705
MseI TTAA 6 cut(s) 929, 953, 971, 1401, 1734, 1948
MslI CAYNNNNRTG 2 cut(s) 657, 1847
MspA1I CMGCKG 4 cut(s) 186, 243, 1509, 1826
MspR9I CCNGG 6 cut(s) 38, 143, 1035, 1129, 1352, 1931
MunI CAATTG 1 cut(s) 1369
Mva1269I GAATGC 2 cut(s) 1038, 1229
MvaI CCWGG 2 cut(s) 1129, 1352
NaeI GCCGGC 3 cut(s) 1054, 1285, 1707
NciI CCSGG 4 cut(s) 38, 143, 1035, 1931
NdeII GATC 4 cut(s) 223, 579, 687, 882
NgoMIV GCCGGC 3 cut(s) 1052, 1283, 1705
NheI GCTAGC 1 cut(s) 895
NlaIII CATG 4 cut(s) 1626, 1782, 1820, 1859
NmeAIII GCCGAG 2 cut(s) 283, 1288
NmuCI GTSAC 4 cut(s) 67, 1192, 1429, 1840
NotI GCGGCCGC 1 cut(s) 1135
NspI RCATGY 2 cut(s) 1626, 1820
PalAI GGCGCGCC 1 cut(s) 307
PasI CCCWGGG 1 cut(s) 1351
PauI GCGCGC 1 cut(s) 307
PciSI GCTCTTC 1 cut(s) 139
PcsI WCGNNNNNNNCGW 4 cut(s) 260, 1311, 1524, 1599
PctI GAATGC 2 cut(s) 1038, 1229
PdiI GCCGGC 3 cut(s) 1054, 1285, 1707
PfeI GAWTC 4 cut(s) 251, 517, 623, 1895
Pfl23II CGTACG 1 cut(s) 1515
PleI GAGTC 4 cut(s) 183, 265, 1163, 1908
PmaCI CACGTG 2 cut(s) 1533, 1804
PmlI CACGTG 2 cut(s) 1533, 1804
PpsI GAGTC 4 cut(s) 183, 265, 1163, 1908
Ppu21I YACGTR 2 cut(s) 1533, 1804
PpuMI RGGWCCY 1 cut(s) 1868
Psp124BI GAGCTC 2 cut(s) 913, 1425
Psp5II RGGWCCY 1 cut(s) 1868
Psp6I CCWGG 2 cut(s) 1127, 1350
PspCI CACGTG 2 cut(s) 1533, 1804
PspFI CCCAGC 1 cut(s) 1701
PspGI CCWGG 2 cut(s) 1127, 1350
PspLI CGTACG 1 cut(s) 1515
PspPI GGNCC 7 cut(s) 328, 385, 493, 1147, 1359, 1852, 1868
PspPPI RGGWCCY 1 cut(s) 1868
PteI GCGCGC 1 cut(s) 307
RsaI GTAC 7 cut(s) 780, 1022, 1375, 1499, 1517, 1586, 1741
RsaNI GTAC 7 cut(s) 779, 1021, 1374, 1498, 1516, 1585, 1740
RseI CAYNNNNRTG 2 cut(s) 657, 1847
SacI GAGCTC 2 cut(s) 913, 1425
SacII CCGCGG 2 cut(s) 187, 1827
SalI GTCGAC 2 cut(s) 1316, 1394
SapI GCTCTTC 1 cut(s) 139
SaqAI TTAA 6 cut(s) 929, 953, 971, 1401, 1734, 1948
Sau3AI GATC 4 cut(s) 223, 579, 687, 882
Sau96I GGNCC 7 cut(s) 328, 385, 493, 1147, 1359, 1852, 1868
ScaI AGTACT 1 cut(s) 1499
SchI GAGTC 4 cut(s) 183, 266, 1163, 1909
ScrFI CCNGG 6 cut(s) 38, 143, 1035, 1129, 1352, 1931
SduI GDGCHC 4 cut(s) 913, 1425, 1577, 1883
SfaNI GCATC 5 cut(s) 391, 478, 499, 1621, 1691
Sfr303I CCGCGG 2 cut(s) 187, 1827
SgrAI CRCCGGYG 2 cut(s) 1052, 1196
SgrBI CCGCGG 2 cut(s) 187, 1827
SgrDI CGTCGACG 1 cut(s) 1316
SgsI GGCGCGCC 1 cut(s) 307
SinI GGWCC 5 cut(s) 328, 385, 493, 1359, 1868
SmiMI CAYNNNNRTG 2 cut(s) 657, 1847
SmlI CTYRAG 3 cut(s) 799, 1424, 1578
SmoI CTYRAG 3 cut(s) 799, 1424, 1578
SpeI ACTAGT 1 cut(s) 178
Sse9I AATT 9 cut(s) 121, 359, 463, 476, 726, 755, 805, 1181, 1369
SspI AATATT 1 cut(s) 1560
SspMI CTAG 5 cut(s) 179, 896, 1220, 1434, 1716
SstI GAGCTC 2 cut(s) 913, 1425
StyD4I CCNGG 6 cut(s) 36, 141, 1033, 1127, 1350, 1929
TaaI ACNGT 9 cut(s) 219, 233, 749, 1027, 1280, 1322, 1502, 1589, 1739
TaiI ACGT 4 cut(s) 396, 1308, 1535, 1806
TaqI TCGA 6 cut(s) 228, 263, 881, 1317, 1395, 1898
TaqII GACCGA 1 cut(s) 953
TasI AATT 9 cut(s) 121, 359, 463, 476, 726, 755, 805, 1181, 1369
TatI WGTACW 4 cut(s) 778, 1020, 1497, 1739
TfiI GAWTC 4 cut(s) 251, 517, 623, 1895
Tru1I TTAA 6 cut(s) 929, 953, 971, 1401, 1734, 1948
Tru9I TTAA 6 cut(s) 929, 953, 971, 1401, 1734, 1948
TscAI CASTG 2 cut(s) 59, 1032
TseFI GTSAC 4 cut(s) 67, 1192, 1429, 1840
Tsp45I GTSAC 4 cut(s) 67, 1192, 1429, 1840
TspDTI ATGAA 3 cut(s) 729, 849, 1767
TspGWI ACGGA 3 cut(s) 1404, 1782, 1786
TspRI CASTG 2 cut(s) 59, 1032
VpaK11BI GGWCC 5 cut(s) 328, 385, 493, 1359, 1868
XapI RAATTY 1 cut(s) 1181
XceI RCATGY 2 cut(s) 1626, 1820
XmiI GTMKAC 2 cut(s) 1317, 1395
XspI CTAG 5 cut(s) 179, 896, 1220, 1434, 1716
ZraI GACGTC 1 cut(s) 1306
ZrmI AGTACT 1 cut(s) 1499
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.