Rap1-interacting factor 1 N terminal
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000007912 |
| rosa_roxburghii | Rroxscaffold_1G00013790 Rroxscaffold_3G00218570 Rroxscaffold_3G00218580 Rroxscaffold_3G00252300 Rroxscaffold_6G00425440 Rroxscaffold_7G00199340 |
| rosa_rugosa | Rorug01G0267500 Rorug01G0267600 Rorug03G0293600 |
| rosa_samantha | Rh2BG557900 Rh4AG086500 Rh4CG083600 Rh4CG094300 Rh4DG195600 Rh5BG296200 Rh5BG488700 Rh5DG337900 Rh5DG565200 |
| rosa_wichuraiana | Rw5G048490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 234 |
| AciI | CCGC | 1 cut(s) | 148 |
| AclWI | GGATC | 2 cut(s) | 260, 328 |
| AdeI | CACNNNGTG | 1 cut(s) | 171 |
| AfaI | GTAC | 1 cut(s) | 24 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 113 |
| AgsI | TTSAA | 6 cut(s) | 82, 163, 216, 248, 260, 304 |
| AluBI | AGCT | 1 cut(s) | 316 |
| AluI | AGCT | 1 cut(s) | 316 |
| AlwI | GGATC | 2 cut(s) | 260, 328 |
| ApeKI | GCWGC | 2 cut(s) | 4, 313 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 227, 259 |
| AsuC2I | CCSGG | 1 cut(s) | 227 |
| BbvI | GCAGC | 1 cut(s) | 325 |
| BccI | CCATC | 1 cut(s) | 13 |
| BclI | TGATCA | 1 cut(s) | 96 |
| BcnI | CCSGG | 1 cut(s) | 227 |
| BfaI | CTAG | 2 cut(s) | 72, 186 |
| BfmI | CTRYAG | 2 cut(s) | 5, 311 |
| BglII | AGATCT | 1 cut(s) | 74 |
| BisI | GCNGC | 2 cut(s) | 5, 314 |
| BlsI | GCNGC | 2 cut(s) | 6, 315 |
| Bme1390I | CCNGG | 1 cut(s) | 227 |
| BmrFI | CCNGG | 1 cut(s) | 227 |
| BmsI | GCATC | 1 cut(s) | 126 |
| BpuMI | CCSGG | 1 cut(s) | 227 |
| BsaBI | GATNNNNATC | 1 cut(s) | 116 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 113 |
| Bse8I | GATNNNNATC | 1 cut(s) | 116 |
| BseGI | GGATG | 1 cut(s) | 21 |
| BseJI | GATNNNNATC | 1 cut(s) | 116 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 113 |
| BseXI | GCAGC | 1 cut(s) | 325 |
| BsiSI | CCGG | 1 cut(s) | 226 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 113 |
| Bsp143I | GATC | 4 cut(s) | 74, 96, 265, 320 |
| BspACI | CCGC | 1 cut(s) | 148 |
| BspHI | TCATGA | 1 cut(s) | 99 |
| BspMAI | CTGCAG | 2 cut(s) | 9, 315 |
| BspPI | GGATC | 2 cut(s) | 260, 328 |
| BssMI | GATC | 4 cut(s) | 74, 96, 265, 320 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 156 |
| BstF5I | GGATG | 1 cut(s) | 21 |
| BstKTI | GATC | 4 cut(s) | 77, 99, 268, 323 |
| BstMBI | GATC | 4 cut(s) | 74, 96, 265, 320 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 156 |
| BstNSI | RCATGY | 1 cut(s) | 154 |
| BstSCI | CCNGG | 1 cut(s) | 225 |
| BstSFI | CTRYAG | 2 cut(s) | 5, 311 |
| BstV1I | GCAGC | 1 cut(s) | 325 |
| BstX2I | RGATCY | 2 cut(s) | 74, 320 |
| BstYI | RGATCY | 2 cut(s) | 74, 320 |
| BtgZI | GCGATG | 1 cut(s) | 150 |
| BtsCI | GGATG | 1 cut(s) | 21 |
| CciI | TCATGA | 1 cut(s) | 99 |
| Csp6I | GTAC | 1 cut(s) | 23 |
| CviAII | CATG | 4 cut(s) | 100, 121, 151, 168 |
| CviJI | RGCY | 2 cut(s) | 94, 316 |
| CviKI_1 | RGCY | 2 cut(s) | 94, 316 |
| CviQI | GTAC | 1 cut(s) | 23 |
| DpnI | GATC | 4 cut(s) | 76, 98, 267, 322 |
| DpnII | GATC | 4 cut(s) | 74, 96, 265, 320 |
| DraIII | CACNNNGTG | 1 cut(s) | 171 |
| FaeI | CATG | 4 cut(s) | 103, 124, 154, 171 |
| FaiI | YATR | 5 cut(s) | 101, 122, 152, 169, 242 |
| FatI | CATG | 4 cut(s) | 99, 120, 150, 167 |
| FbaI | TGATCA | 1 cut(s) | 96 |
| FblI | GTMKAC | 1 cut(s) | 234 |
| Fnu4HI | GCNGC | 2 cut(s) | 5, 314 |
| FokI | GGATG | 1 cut(s) | 28 |
| Fsp4HI | GCNGC | 2 cut(s) | 5, 314 |
| FspBI | CTAG | 2 cut(s) | 72, 186 |
| GluI | GCNGC | 2 cut(s) | 5, 314 |
| HapII | CCGG | 1 cut(s) | 226 |
| Hin1II | CATG | 4 cut(s) | 103, 124, 154, 171 |
| HinfI | GANTC | 1 cut(s) | 209 |
| HpaII | CCGG | 1 cut(s) | 226 |
| Hpy166II | GTNNAC | 1 cut(s) | 235 |
| Hpy188I | TCNGA | 3 cut(s) | 204, 280, 320 |
| Hpy188III | TCNNGA | 1 cut(s) | 100 |
| Hpy8I | GTNNAC | 1 cut(s) | 235 |
| HpyAV | CCTTC | 1 cut(s) | 323 |
| HpyCH4V | TGCA | 2 cut(s) | 7, 313 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 156 |
| Hsp92II | CATG | 4 cut(s) | 103, 124, 154, 171 |
| Ksp22I | TGATCA | 1 cut(s) | 96 |
| Kzo9I | GATC | 4 cut(s) | 74, 96, 265, 320 |
| LpnPI | CCDG | 2 cut(s) | 239, 323 |
| Lsp1109I | GCAGC | 1 cut(s) | 325 |
| LweI | GCATC | 1 cut(s) | 126 |
| MaeI | CTAG | 2 cut(s) | 72, 186 |
| MaeIII | GTNAC | 1 cut(s) | 128 |
| MalI | GATC | 4 cut(s) | 76, 98, 267, 322 |
| MboI | GATC | 4 cut(s) | 74, 96, 265, 320 |
| MboII | GAAGA | 1 cut(s) | 204 |
| MflI | RGATCY | 2 cut(s) | 74, 320 |
| MnlI | CCTC | 2 cut(s) | 6, 208 |
| MseI | TTAA | 1 cut(s) | 222 |
| MspI | CCGG | 1 cut(s) | 226 |
| MspR9I | CCNGG | 1 cut(s) | 227 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 156 |
| NciI | CCSGG | 1 cut(s) | 227 |
| NdeII | GATC | 4 cut(s) | 74, 96, 265, 320 |
| NlaIII | CATG | 4 cut(s) | 103, 124, 154, 171 |
| NspI | RCATGY | 1 cut(s) | 154 |
| PagI | TCATGA | 1 cut(s) | 99 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 324 |
| PfeI | GAWTC | 1 cut(s) | 209 |
| PkrI | GCNGC | 2 cut(s) | 6, 315 |
| PstI | CTGCAG | 2 cut(s) | 9, 315 |
| PsuI | RGATCY | 2 cut(s) | 74, 320 |
| RsaI | GTAC | 1 cut(s) | 24 |
| RsaNI | GTAC | 1 cut(s) | 23 |
| SaqAI | TTAA | 1 cut(s) | 222 |
| SatI | GCNGC | 2 cut(s) | 5, 314 |
| Sau3AI | GATC | 4 cut(s) | 74, 96, 265, 320 |
| ScrFI | CCNGG | 1 cut(s) | 227 |
| SetI | ASST | 4 cut(s) | 187, 200, 318, 334 |
| SfaNI | GCATC | 1 cut(s) | 126 |
| SfcI | CTRYAG | 2 cut(s) | 5, 311 |
| SsiI | CCGC | 1 cut(s) | 148 |
| SspMI | CTAG | 2 cut(s) | 72, 186 |
| StyD4I | CCNGG | 1 cut(s) | 225 |
| TaqI | TCGA | 1 cut(s) | 327 |
| TfiI | GAWTC | 1 cut(s) | 209 |
| Tru1I | TTAA | 1 cut(s) | 222 |
| Tru9I | TTAA | 1 cut(s) | 222 |
| TseI | GCWGC | 2 cut(s) | 4, 313 |
| TspDTI | ATGAA | 1 cut(s) | 72 |
| XceI | RCATGY | 1 cut(s) | 154 |
| XmiI | GTMKAC | 1 cut(s) | 234 |
| XspI | CTAG | 2 cut(s) | 72, 186 |