Rap1-interacting factor 1 N terminal
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000007912 |
| rosa_roxburghii | Rroxscaffold_1G00013790 Rroxscaffold_3G00218570 Rroxscaffold_3G00218580 Rroxscaffold_3G00252300 Rroxscaffold_6G00425440 Rroxscaffold_7G00199340 |
| rosa_rugosa | Rorug01G0267500 Rorug01G0267600 Rorug03G0293600 |
| rosa_samantha | Rh2BG557900 Rh4AG086500 Rh4CG083600 Rh4CG094300 Rh4DG195600 Rh5BG296200 Rh5BG488700 Rh5DG337900 Rh5DG565200 |
| rosa_wichuraiana | Rw5G048490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 154 |
| AciI | CCGC | 2 cut(s) | 40, 175 |
| AcsI | RAATTY | 1 cut(s) | 96 |
| AfaI | GTAC | 1 cut(s) | 152 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 154 |
| AgsI | TTSAA | 4 cut(s) | 11, 20, 64, 203 |
| AluBI | AGCT | 1 cut(s) | 181 |
| AluI | AGCT | 1 cut(s) | 181 |
| Alw26I | GTCTC | 1 cut(s) | 57 |
| ApeKI | GCWGC | 2 cut(s) | 172, 178 |
| ApoI | RAATTY | 1 cut(s) | 96 |
| AseI | ATTAAT | 1 cut(s) | 81 |
| BbvI | GCAGC | 2 cut(s) | 159, 190 |
| BccI | CCATC | 1 cut(s) | 24 |
| BcoDI | GTCTC | 1 cut(s) | 57 |
| BfaI | CTAG | 1 cut(s) | 47 |
| BisI | GCNGC | 3 cut(s) | 173, 176, 179 |
| BlsI | GCNGC | 3 cut(s) | 174, 177, 180 |
| BmiI | GGNNCC | 1 cut(s) | 167 |
| BmrI | ACTGGG | 1 cut(s) | 142 |
| BmsI | GCATC | 1 cut(s) | 227 |
| BmuI | ACTGGG | 1 cut(s) | 142 |
| BpuEI | CTTGAG | 1 cut(s) | 203 |
| BsaAI | YACGTR | 1 cut(s) | 154 |
| BsaI | GGTCTC | 1 cut(s) | 57 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 154 |
| Bse118I | RCCGGY | 1 cut(s) | 168 |
| Bse1I | ACTGG | 1 cut(s) | 148 |
| BseGI | GGATG | 1 cut(s) | 35 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 154 |
| BseNI | ACTGG | 1 cut(s) | 148 |
| BseXI | GCAGC | 2 cut(s) | 159, 190 |
| BsiSI | CCGG | 1 cut(s) | 169 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 154 |
| BsmAI | GTCTC | 1 cut(s) | 57 |
| Bso31I | GGTCTC | 1 cut(s) | 57 |
| Bsp143I | GATC | 1 cut(s) | 190 |
| BspACI | CCGC | 2 cut(s) | 40, 175 |
| BspHI | TCATGA | 1 cut(s) | 234 |
| BspLI | GGNNCC | 1 cut(s) | 167 |
| BspTNI | GGTCTC | 1 cut(s) | 57 |
| BsrFI | RCCGGY | 1 cut(s) | 168 |
| BsrI | ACTGG | 1 cut(s) | 148 |
| BssAI | RCCGGY | 1 cut(s) | 168 |
| BssMI | GATC | 1 cut(s) | 190 |
| BstBAI | YACGTR | 1 cut(s) | 154 |
| BstF5I | GGATG | 1 cut(s) | 35 |
| BstKTI | GATC | 1 cut(s) | 193 |
| BstMAI | GTCTC | 1 cut(s) | 57 |
| BstMBI | GATC | 1 cut(s) | 190 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 178, 184 |
| BstV1I | GCAGC | 2 cut(s) | 159, 190 |
| BtsCI | GGATG | 1 cut(s) | 35 |
| CciI | TCATGA | 1 cut(s) | 234 |
| Cfr10I | RCCGGY | 1 cut(s) | 168 |
| Csp6I | GTAC | 1 cut(s) | 151 |
| CviAII | CATG | 4 cut(s) | 24, 56, 212, 235 |
| CviJI | RGCY | 3 cut(s) | 158, 172, 181 |
| CviKI_1 | RGCY | 3 cut(s) | 158, 172, 181 |
| CviQI | GTAC | 1 cut(s) | 151 |
| DpnI | GATC | 1 cut(s) | 192 |
| DpnII | GATC | 1 cut(s) | 190 |
| Eco31I | GGTCTC | 1 cut(s) | 57 |
| FaeI | CATG | 4 cut(s) | 27, 59, 215, 238 |
| FaiI | YATR | 6 cut(s) | 25, 36, 57, 89, 213, 236 |
| FatI | CATG | 4 cut(s) | 23, 55, 211, 234 |
| Fnu4HI | GCNGC | 3 cut(s) | 173, 176, 179 |
| FokI | GGATG | 1 cut(s) | 42 |
| Fsp4HI | GCNGC | 3 cut(s) | 173, 176, 179 |
| FspBI | CTAG | 1 cut(s) | 47 |
| GluI | GCNGC | 3 cut(s) | 173, 176, 179 |
| HapII | CCGG | 1 cut(s) | 169 |
| Hin1II | CATG | 4 cut(s) | 27, 59, 215, 238 |
| HinfI | GANTC | 1 cut(s) | 7 |
| HpaII | CCGG | 1 cut(s) | 169 |
| Hpy188I | TCNGA | 3 cut(s) | 118, 138, 195 |
| Hpy188III | TCNNGA | 1 cut(s) | 235 |
| HpyCH4IV | ACGT | 1 cut(s) | 153 |
| HpyCH4V | TGCA | 1 cut(s) | 211 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 178, 184 |
| HpySE526I | ACGT | 1 cut(s) | 153 |
| Hsp92II | CATG | 4 cut(s) | 27, 59, 215, 238 |
| Kzo9I | GATC | 1 cut(s) | 190 |
| LpnPI | CCDG | 2 cut(s) | 161, 182 |
| Lsp1109I | GCAGC | 2 cut(s) | 159, 190 |
| LweI | GCATC | 1 cut(s) | 227 |
| MaeI | CTAG | 1 cut(s) | 47 |
| MaeII | ACGT | 1 cut(s) | 153 |
| MalI | GATC | 1 cut(s) | 192 |
| MboI | GATC | 1 cut(s) | 190 |
| MboII | GAAGA | 2 cut(s) | 16, 76 |
| MluCI | AATT | 2 cut(s) | 78, 96 |
| MnlI | CCTC | 1 cut(s) | 208 |
| MseI | TTAA | 2 cut(s) | 77, 81 |
| MslI | CAYNNNNRTG | 1 cut(s) | 28 |
| MspI | CCGG | 1 cut(s) | 169 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 178, 184 |
| NdeII | GATC | 1 cut(s) | 190 |
| NlaIII | CATG | 4 cut(s) | 27, 59, 215, 238 |
| NlaIV | GGNNCC | 1 cut(s) | 167 |
| PacI | TTAATTAA | 1 cut(s) | 81 |
| PagI | TCATGA | 1 cut(s) | 234 |
| PfeI | GAWTC | 1 cut(s) | 7 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 154 |
| PkrI | GCNGC | 3 cut(s) | 174, 177, 180 |
| Ppu21I | YACGTR | 1 cut(s) | 154 |
| PshBI | ATTAAT | 1 cut(s) | 81 |
| PspN4I | GGNNCC | 1 cut(s) | 167 |
| RsaI | GTAC | 1 cut(s) | 152 |
| RsaNI | GTAC | 1 cut(s) | 151 |
| RseI | CAYNNNNRTG | 1 cut(s) | 28 |
| SaqAI | TTAA | 2 cut(s) | 77, 81 |
| SatI | GCNGC | 3 cut(s) | 173, 176, 179 |
| Sau3AI | GATC | 1 cut(s) | 190 |
| SetI | ASST | 3 cut(s) | 156, 183, 209 |
| SfaNI | GCATC | 1 cut(s) | 227 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 28 |
| SmlI | CTYRAG | 1 cut(s) | 182 |
| SmoI | CTYRAG | 1 cut(s) | 182 |
| Sse9I | AATT | 2 cut(s) | 78, 96 |
| SsiI | CCGC | 2 cut(s) | 40, 175 |
| SspMI | CTAG | 1 cut(s) | 47 |
| TaiI | ACGT | 1 cut(s) | 156 |
| TasI | AATT | 2 cut(s) | 78, 96 |
| TauI | GCSGC | 1 cut(s) | 178 |
| TfiI | GAWTC | 1 cut(s) | 7 |
| Tru1I | TTAA | 2 cut(s) | 77, 81 |
| Tru9I | TTAA | 2 cut(s) | 77, 81 |
| TseI | GCWGC | 2 cut(s) | 172, 178 |
| TspDTI | ATGAA | 2 cut(s) | 17, 223 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 154 |
| VspI | ATTAAT | 1 cut(s) | 81 |
| XapI | RAATTY | 1 cut(s) | 96 |
| XspI | CTAG | 1 cut(s) | 47 |