Rap1-interacting factor 1 N terminal
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000007912 |
| rosa_roxburghii | Rroxscaffold_1G00013790 Rroxscaffold_3G00218570 Rroxscaffold_3G00218580 Rroxscaffold_3G00252300 Rroxscaffold_6G00425440 Rroxscaffold_7G00199340 |
| rosa_rugosa | Rorug01G0267500 Rorug01G0267600 Rorug03G0293600 |
| rosa_samantha | Rh2BG557900 Rh4AG086500 Rh4CG083600 Rh4CG094300 Rh4DG195600 Rh5BG296200 Rh5BG488700 Rh5DG337900 Rh5DG565200 |
| rosa_wichuraiana | Rw5G048490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 13 |
| AcoI | YGGCCR | 1 cut(s) | 331 |
| AcsI | RAATTY | 2 cut(s) | 310, 320 |
| AfaI | GTAC | 1 cut(s) | 197 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 75, 340 |
| AgsI | TTSAA | 1 cut(s) | 251 |
| AluBI | AGCT | 2 cut(s) | 160, 357 |
| AluI | AGCT | 2 cut(s) | 160, 357 |
| Alw21I | GWGCWC | 2 cut(s) | 162, 219 |
| Alw26I | GTCTC | 2 cut(s) | 80, 320 |
| AlwI | GGATC | 1 cut(s) | 13 |
| AoxI | GGCC | 1 cut(s) | 331 |
| ApoI | RAATTY | 2 cut(s) | 310, 320 |
| AspS9I | GGNCC | 1 cut(s) | 346 |
| AsuHPI | GGTGA | 1 cut(s) | 87 |
| AvaII | GGWCC | 1 cut(s) | 346 |
| BalI | TGGCCA | 1 cut(s) | 333 |
| BanII | GRGCYC | 1 cut(s) | 162 |
| Bbv12I | GWGCWC | 2 cut(s) | 162, 219 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 38, 72 |
| BclI | TGATCA | 1 cut(s) | 184 |
| BcoDI | GTCTC | 2 cut(s) | 80, 320 |
| BfmI | CTRYAG | 1 cut(s) | 223 |
| Bme18I | GGWCC | 1 cut(s) | 346 |
| BmgT120I | GGNCC | 1 cut(s) | 346 |
| BmiI | GGNNCC | 1 cut(s) | 259 |
| BsaAI | YACGTR | 2 cut(s) | 123, 195 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 75, 340 |
| Bse1I | ACTGG | 1 cut(s) | 334 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 75, 340 |
| BseNI | ACTGG | 1 cut(s) | 334 |
| BseYI | CCCAGC | 1 cut(s) | 59 |
| BshFI | GGCC | 1 cut(s) | 333 |
| BsiHKAI | GWGCWC | 2 cut(s) | 162, 219 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 75, 340 |
| BsmAI | GTCTC | 2 cut(s) | 80, 320 |
| BsnI | GGCC | 1 cut(s) | 333 |
| Bsp1286I | GDGCHC | 2 cut(s) | 162, 219 |
| Bsp143I | GATC | 3 cut(s) | 5, 106, 184 |
| BspANI | GGCC | 1 cut(s) | 333 |
| BspLI | GGNNCC | 1 cut(s) | 259 |
| BspPI | GGATC | 1 cut(s) | 13 |
| BsrI | ACTGG | 1 cut(s) | 334 |
| BssMI | GATC | 3 cut(s) | 5, 106, 184 |
| Bst4CI | ACNGT | 1 cut(s) | 227 |
| BstBAI | YACGTR | 2 cut(s) | 123, 195 |
| BstDEI | CTNAG | 2 cut(s) | 267, 353 |
| BstKTI | GATC | 3 cut(s) | 8, 109, 187 |
| BstMAI | GTCTC | 2 cut(s) | 80, 320 |
| BstMBI | GATC | 3 cut(s) | 5, 106, 184 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 65, 166 |
| BstSFI | CTRYAG | 1 cut(s) | 223 |
| BstSNI | TACGTA | 2 cut(s) | 123, 195 |
| BstX2I | RGATCY | 1 cut(s) | 5 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 306 |
| BstYI | RGATCY | 1 cut(s) | 5 |
| BsuRI | GGCC | 1 cut(s) | 333 |
| BtsI | GCAGTG | 1 cut(s) | 217 |
| BtsIMutI | CAGTG | 2 cut(s) | 217, 232 |
| Cfr13I | GGNCC | 1 cut(s) | 346 |
| Csp6I | GTAC | 1 cut(s) | 196 |
| CviAII | CATG | 1 cut(s) | 236 |
| CviJI | RGCY | 4 cut(s) | 118, 160, 333, 357 |
| CviKI_1 | RGCY | 4 cut(s) | 118, 160, 333, 357 |
| CviQI | GTAC | 1 cut(s) | 196 |
| DdeI | CTNAG | 2 cut(s) | 267, 353 |
| DpnI | GATC | 3 cut(s) | 7, 108, 186 |
| DpnII | GATC | 3 cut(s) | 5, 106, 184 |
| EaeI | YGGCCR | 1 cut(s) | 331 |
| Ecl136II | GAGCTC | 1 cut(s) | 160 |
| Eco105I | TACGTA | 2 cut(s) | 123, 195 |
| Eco24I | GRGCYC | 1 cut(s) | 162 |
| Eco47I | GGWCC | 1 cut(s) | 346 |
| Eco53kI | GAGCTC | 1 cut(s) | 160 |
| EcoICRI | GAGCTC | 1 cut(s) | 160 |
| EcoO109I | RGGNCCY | 1 cut(s) | 346 |
| EcoRI | GAATTC | 1 cut(s) | 310 |
| EcoT38I | GRGCYC | 1 cut(s) | 162 |
| FaeI | CATG | 1 cut(s) | 239 |
| FaiI | YATR | 6 cut(s) | 66, 83, 143, 189, 237, 264 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 21, 53 |
| FatI | CATG | 1 cut(s) | 235 |
| FbaI | TGATCA | 1 cut(s) | 184 |
| FriOI | GRGCYC | 1 cut(s) | 162 |
| GsaI | CCCAGC | 1 cut(s) | 63 |
| HaeIII | GGCC | 1 cut(s) | 333 |
| Hin1II | CATG | 1 cut(s) | 239 |
| HinfI | GANTC | 1 cut(s) | 130 |
| HphI | GGTGA | 1 cut(s) | 87 |
| HpyAV | CCTTC | 2 cut(s) | 245, 359 |
| HpyCH4III | ACNGT | 1 cut(s) | 227 |
| HpyCH4IV | ACGT | 2 cut(s) | 122, 194 |
| HpyCH4V | TGCA | 1 cut(s) | 273 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 65, 166 |
| HpyF3I | CTNAG | 2 cut(s) | 267, 353 |
| HpySE526I | ACGT | 2 cut(s) | 122, 194 |
| Hsp92II | CATG | 1 cut(s) | 239 |
| Ksp22I | TGATCA | 1 cut(s) | 184 |
| Kzo9I | GATC | 3 cut(s) | 5, 106, 184 |
| LpnPI | CCDG | 3 cut(s) | 45, 312, 315 |
| MaeII | ACGT | 2 cut(s) | 122, 194 |
| MaeIII | GTNAC | 1 cut(s) | 227 |
| MalI | GATC | 3 cut(s) | 7, 108, 186 |
| MboI | GATC | 3 cut(s) | 5, 106, 184 |
| MflI | RGATCY | 1 cut(s) | 5 |
| MhlI | GDGCHC | 2 cut(s) | 162, 219 |
| MlsI | TGGCCA | 1 cut(s) | 333 |
| MluCI | AATT | 4 cut(s) | 72, 201, 310, 320 |
| MluNI | TGGCCA | 1 cut(s) | 333 |
| MnlI | CCTC | 3 cut(s) | 35, 79, 337 |
| Mox20I | TGGCCA | 1 cut(s) | 333 |
| MscI | TGGCCA | 1 cut(s) | 333 |
| MseI | TTAA | 3 cut(s) | 39, 200, 379 |
| Msp20I | TGGCCA | 1 cut(s) | 333 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 65, 166 |
| NdeII | GATC | 3 cut(s) | 5, 106, 184 |
| NlaIII | CATG | 1 cut(s) | 239 |
| NlaIV | GGNNCC | 1 cut(s) | 259 |
| NmuCI | GTSAC | 1 cut(s) | 227 |
| PfeI | GAWTC | 1 cut(s) | 130 |
| Ppu21I | YACGTR | 2 cut(s) | 123, 195 |
| PpuMI | RGGWCCY | 1 cut(s) | 346 |
| Psp124BI | GAGCTC | 1 cut(s) | 162 |
| Psp5II | RGGWCCY | 1 cut(s) | 346 |
| PspFI | CCCAGC | 1 cut(s) | 59 |
| PspN4I | GGNNCC | 1 cut(s) | 259 |
| PspPI | GGNCC | 1 cut(s) | 346 |
| PspPPI | RGGWCCY | 1 cut(s) | 346 |
| PsuI | RGATCY | 1 cut(s) | 5 |
| RsaI | GTAC | 1 cut(s) | 197 |
| RsaNI | GTAC | 1 cut(s) | 196 |
| SacI | GAGCTC | 1 cut(s) | 162 |
| SaqAI | TTAA | 3 cut(s) | 39, 200, 379 |
| Sau3AI | GATC | 3 cut(s) | 5, 106, 184 |
| Sau96I | GGNCC | 1 cut(s) | 346 |
| SduI | GDGCHC | 2 cut(s) | 162, 219 |
| SetI | ASST | 7 cut(s) | 125, 141, 162, 197, 256, 348, 359 |
| SfcI | CTRYAG | 1 cut(s) | 223 |
| SgeI | CNNG | 9 cut(s) | 21, 27, 68, 72, 89, 248, 304, 311, 342 |
| SinI | GGWCC | 1 cut(s) | 346 |
| SnaBI | TACGTA | 2 cut(s) | 123, 195 |
| Sse9I | AATT | 4 cut(s) | 72, 201, 310, 320 |
| SstI | GAGCTC | 1 cut(s) | 162 |
| TaaI | ACNGT | 1 cut(s) | 227 |
| TaiI | ACGT | 2 cut(s) | 125, 197 |
| TaqI | TCGA | 1 cut(s) | 48 |
| TasI | AATT | 4 cut(s) | 72, 201, 310, 320 |
| TfiI | GAWTC | 1 cut(s) | 130 |
| Tru1I | TTAA | 3 cut(s) | 39, 200, 379 |
| Tru9I | TTAA | 3 cut(s) | 39, 200, 379 |
| TscAI | CASTG | 2 cut(s) | 224, 232 |
| TseFI | GTSAC | 1 cut(s) | 227 |
| Tsp45I | GTSAC | 1 cut(s) | 227 |
| TspDTI | ATGAA | 1 cut(s) | 360 |
| TspRI | CASTG | 2 cut(s) | 224, 232 |
| VpaK11BI | GGWCC | 1 cut(s) | 346 |
| XapI | RAATTY | 2 cut(s) | 310, 320 |