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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000007912 |
| rosa_roxburghii | Rroxscaffold_1G00013790 Rroxscaffold_3G00218570 Rroxscaffold_3G00218580 Rroxscaffold_3G00252300 Rroxscaffold_6G00425440 Rroxscaffold_7G00199340 |
| rosa_rugosa | Rorug01G0267500 Rorug01G0267600 Rorug03G0293600 |
| rosa_samantha | Rh2BG557900 Rh4AG086500 Rh4CG083600 Rh4CG094300 Rh4DG195600 Rh5BG296200 Rh5BG488700 Rh5DG337900 Rh5DG565200 |
| rosa_wichuraiana | Rw5G048490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 14 |
| AciI | CCGC | 1 cut(s) | 145 |
| AfaI | GTAC | 1 cut(s) | 122 |
| AflIII | ACRYGT | 1 cut(s) | 12 |
| AgsI | TTSAA | 3 cut(s) | 86, 110, 173 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 13 |
| AluBI | AGCT | 1 cut(s) | 151 |
| AluI | AGCT | 1 cut(s) | 151 |
| ApeKI | GCWGC | 2 cut(s) | 142, 148 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 105 |
| BanII | GRGCYC | 1 cut(s) | 23 |
| BbvI | GCAGC | 2 cut(s) | 129, 160 |
| BceAI | ACGGC | 1 cut(s) | 44 |
| BglII | AGATCT | 1 cut(s) | 112 |
| BisI | GCNGC | 3 cut(s) | 143, 146, 149 |
| BlsI | GCNGC | 3 cut(s) | 144, 147, 150 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 13 |
| BmiI | GGNNCC | 1 cut(s) | 137 |
| BmsI | GCATC | 1 cut(s) | 197 |
| BpuEI | CTTGAG | 3 cut(s) | 34, 137, 173 |
| BsaAI | YACGTR | 1 cut(s) | 124 |
| Bse118I | RCCGGY | 1 cut(s) | 138 |
| BseXI | GCAGC | 2 cut(s) | 129, 160 |
| Bsh1236I | CGCG | 1 cut(s) | 14 |
| BsiSI | CCGG | 1 cut(s) | 139 |
| Bsp1286I | GDGCHC | 1 cut(s) | 23 |
| Bsp143I | GATC | 2 cut(s) | 112, 160 |
| BspACI | CCGC | 1 cut(s) | 145 |
| BspFNI | CGCG | 1 cut(s) | 14 |
| BspHI | TCATGA | 1 cut(s) | 204 |
| BspLI | GGNNCC | 1 cut(s) | 137 |
| BspQI | GCTCTTC | 1 cut(s) | 81 |
| BsrFI | RCCGGY | 1 cut(s) | 138 |
| BssAI | RCCGGY | 1 cut(s) | 138 |
| BssMI | GATC | 2 cut(s) | 112, 160 |
| Bst4CI | ACNGT | 1 cut(s) | 64 |
| Bst6I | CTCTTC | 1 cut(s) | 81 |
| BstBAI | YACGTR | 1 cut(s) | 124 |
| BstFNI | CGCG | 1 cut(s) | 14 |
| BstKTI | GATC | 2 cut(s) | 115, 163 |
| BstMBI | GATC | 2 cut(s) | 112, 160 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 148, 154 |
| BstUI | CGCG | 1 cut(s) | 14 |
| BstV1I | GCAGC | 2 cut(s) | 129, 160 |
| BstX2I | RGATCY | 1 cut(s) | 112 |
| BstYI | RGATCY | 1 cut(s) | 112 |
| CciI | TCATGA | 1 cut(s) | 204 |
| Cfr10I | RCCGGY | 1 cut(s) | 138 |
| CseI | GACGC | 1 cut(s) | 3 |
| Csp6I | GTAC | 1 cut(s) | 121 |
| CviAII | CATG | 2 cut(s) | 182, 205 |
| CviJI | RGCY | 7 cut(s) | 21, 55, 91, 128, 142, 151, 157 |
| CviKI_1 | RGCY | 7 cut(s) | 21, 55, 91, 128, 142, 151, 157 |
| CviQI | GTAC | 1 cut(s) | 121 |
| DpnI | GATC | 2 cut(s) | 114, 162 |
| DpnII | GATC | 2 cut(s) | 112, 160 |
| DriI | GACNNNNNGTC | 1 cut(s) | 13 |
| Eam1104I | CTCTTC | 1 cut(s) | 81 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 13 |
| EarI | CTCTTC | 1 cut(s) | 81 |
| Eco24I | GRGCYC | 1 cut(s) | 23 |
| EcoT38I | GRGCYC | 1 cut(s) | 23 |
| FaeI | CATG | 2 cut(s) | 185, 208 |
| FaiI | YATR | 3 cut(s) | 58, 183, 206 |
| FatI | CATG | 2 cut(s) | 181, 204 |
| Fnu4HI | GCNGC | 3 cut(s) | 143, 146, 149 |
| FriOI | GRGCYC | 1 cut(s) | 23 |
| Fsp4HI | GCNGC | 3 cut(s) | 143, 146, 149 |
| GluI | GCNGC | 3 cut(s) | 143, 146, 149 |
| HapII | CCGG | 1 cut(s) | 139 |
| HgaI | GACGC | 1 cut(s) | 3 |
| Hin1II | CATG | 2 cut(s) | 185, 208 |
| HinfI | GANTC | 1 cut(s) | 106 |
| HpaII | CCGG | 1 cut(s) | 139 |
| Hpy188I | TCNGA | 1 cut(s) | 165 |
| Hpy188III | TCNNGA | 3 cut(s) | 110, 116, 205 |
| Hpy99I | CGWCG | 1 cut(s) | 19 |
| HpyCH4III | ACNGT | 1 cut(s) | 64 |
| HpyCH4IV | ACGT | 1 cut(s) | 123 |
| HpyCH4V | TGCA | 2 cut(s) | 60, 181 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 148, 154 |
| HpySE526I | ACGT | 1 cut(s) | 123 |
| Hsp92II | CATG | 2 cut(s) | 185, 208 |
| Kzo9I | GATC | 2 cut(s) | 112, 160 |
| LguI | GCTCTTC | 1 cut(s) | 81 |
| LpnPI | CCDG | 2 cut(s) | 152, 171 |
| Lsp1109I | GCAGC | 2 cut(s) | 129, 160 |
| LweI | GCATC | 1 cut(s) | 197 |
| MaeII | ACGT | 1 cut(s) | 123 |
| MalI | GATC | 2 cut(s) | 114, 162 |
| MboI | GATC | 2 cut(s) | 112, 160 |
| MboII | GAAGA | 1 cut(s) | 98 |
| MflI | RGATCY | 1 cut(s) | 112 |
| MhlI | GDGCHC | 1 cut(s) | 23 |
| MluI | ACGCGT | 1 cut(s) | 12 |
| MnlI | CCTC | 3 cut(s) | 52, 58, 178 |
| MroXI | GAANNNNTTC | 1 cut(s) | 105 |
| MseI | TTAA | 2 cut(s) | 38, 78 |
| MspI | CCGG | 1 cut(s) | 139 |
| MvnI | CGCG | 1 cut(s) | 14 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 148, 154 |
| NdeII | GATC | 2 cut(s) | 112, 160 |
| NlaIII | CATG | 2 cut(s) | 185, 208 |
| NlaIV | GGNNCC | 1 cut(s) | 137 |
| PagI | TCATGA | 1 cut(s) | 204 |
| PciSI | GCTCTTC | 1 cut(s) | 81 |
| PdmI | GAANNNNTTC | 1 cut(s) | 105 |
| PfeI | GAWTC | 1 cut(s) | 106 |
| PkrI | GCNGC | 3 cut(s) | 144, 147, 150 |
| Ppu21I | YACGTR | 1 cut(s) | 124 |
| PspN4I | GGNNCC | 1 cut(s) | 137 |
| PsuI | RGATCY | 1 cut(s) | 112 |
| RsaI | GTAC | 1 cut(s) | 122 |
| RsaNI | GTAC | 1 cut(s) | 121 |
| SapI | GCTCTTC | 1 cut(s) | 81 |
| SaqAI | TTAA | 2 cut(s) | 38, 78 |
| SatI | GCNGC | 3 cut(s) | 143, 146, 149 |
| Sau3AI | GATC | 2 cut(s) | 112, 160 |
| SduI | GDGCHC | 1 cut(s) | 23 |
| SetI | ASST | 4 cut(s) | 44, 126, 153, 179 |
| SfaNI | GCATC | 1 cut(s) | 197 |
| SmlI | CTYRAG | 3 cut(s) | 49, 116, 152 |
| SmoI | CTYRAG | 3 cut(s) | 49, 116, 152 |
| SsiI | CCGC | 1 cut(s) | 145 |
| TaaI | ACNGT | 1 cut(s) | 64 |
| TaiI | ACGT | 1 cut(s) | 126 |
| TaqI | TCGA | 1 cut(s) | 17 |
| TauI | GCSGC | 1 cut(s) | 148 |
| TfiI | GAWTC | 1 cut(s) | 106 |
| Tru1I | TTAA | 2 cut(s) | 38, 78 |
| Tru9I | TTAA | 2 cut(s) | 38, 78 |
| TseI | GCWGC | 2 cut(s) | 142, 148 |
| TspDTI | ATGAA | 1 cut(s) | 193 |
| XmnI | GAANNNNTTC | 1 cut(s) | 105 |