Rap1-interacting factor 1 N terminal
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000007912 |
| rosa_roxburghii | Rroxscaffold_1G00013790 Rroxscaffold_3G00218570 Rroxscaffold_3G00218580 Rroxscaffold_3G00252300 Rroxscaffold_6G00425440 Rroxscaffold_7G00199340 |
| rosa_rugosa | Rorug01G0267500 Rorug01G0267600 Rorug03G0293600 |
| rosa_samantha | Rh2BG557900 Rh4AG086500 Rh4CG083600 Rh4CG094300 Rh4DG195600 Rh5BG296200 Rh5BG488700 Rh5DG337900 Rh5DG565200 |
| rosa_wichuraiana | Rw5G048490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 190 |
| AclWI | GGATC | 3 cut(s) | 302, 345, 452 |
| AdeI | CACNNNGTG | 1 cut(s) | 213 |
| AfaI | GTAC | 1 cut(s) | 452 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 155 |
| AgsI | TTSAA | 6 cut(s) | 124, 205, 247, 258, 290, 302 |
| AluBI | AGCT | 2 cut(s) | 296, 324 |
| AluI | AGCT | 2 cut(s) | 296, 324 |
| AlwI | GGATC | 3 cut(s) | 302, 345, 452 |
| ApeKI | GCWGC | 2 cut(s) | 46, 293 |
| AsuC2I | CCSGG | 1 cut(s) | 269 |
| AsuHPI | GGTGA | 2 cut(s) | 4, 110 |
| BbvI | GCAGC | 2 cut(s) | 33, 305 |
| BccI | CCATC | 1 cut(s) | 55 |
| BcnI | CCSGG | 1 cut(s) | 269 |
| BfaI | CTAG | 2 cut(s) | 114, 228 |
| BfmI | CTRYAG | 1 cut(s) | 47 |
| BglII | AGATCT | 1 cut(s) | 116 |
| BisI | GCNGC | 2 cut(s) | 47, 294 |
| BlsI | GCNGC | 2 cut(s) | 48, 295 |
| Bme1390I | CCNGG | 1 cut(s) | 269 |
| BmrFI | CCNGG | 1 cut(s) | 269 |
| BmsI | GCATC | 1 cut(s) | 168 |
| BpuMI | CCSGG | 1 cut(s) | 269 |
| BsaBI | GATNNNNATC | 1 cut(s) | 158 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 155 |
| Bse8I | GATNNNNATC | 1 cut(s) | 158 |
| BseGI | GGATG | 1 cut(s) | 63 |
| BseJI | GATNNNNATC | 1 cut(s) | 158 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 155 |
| BseXI | GCAGC | 2 cut(s) | 33, 305 |
| BsiSI | CCGG | 1 cut(s) | 268 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 155 |
| Bsp143I | GATC | 4 cut(s) | 116, 307, 337, 457 |
| BspACI | CCGC | 1 cut(s) | 190 |
| BspHI | TCATGA | 1 cut(s) | 141 |
| BspMAI | CTGCAG | 1 cut(s) | 51 |
| BspPI | GGATC | 3 cut(s) | 302, 345, 452 |
| BssMI | GATC | 4 cut(s) | 116, 307, 337, 457 |
| Bst4CI | ACNGT | 2 cut(s) | 32, 472 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 198 |
| BstF5I | GGATG | 1 cut(s) | 63 |
| BstKTI | GATC | 4 cut(s) | 119, 310, 340, 460 |
| BstMBI | GATC | 4 cut(s) | 116, 307, 337, 457 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 43, 198 |
| BstNSI | RCATGY | 1 cut(s) | 196 |
| BstSCI | CCNGG | 1 cut(s) | 267 |
| BstSFI | CTRYAG | 1 cut(s) | 47 |
| BstV1I | GCAGC | 2 cut(s) | 33, 305 |
| BstX2I | RGATCY | 2 cut(s) | 116, 337 |
| BstYI | RGATCY | 2 cut(s) | 116, 337 |
| BtgZI | GCGATG | 1 cut(s) | 192 |
| BtsCI | GGATG | 1 cut(s) | 63 |
| BtsIMutI | CAGTG | 1 cut(s) | 149 |
| CciI | TCATGA | 1 cut(s) | 141 |
| Csp6I | GTAC | 1 cut(s) | 451 |
| CviAII | CATG | 4 cut(s) | 142, 163, 193, 210 |
| CviJI | RGCY | 4 cut(s) | 136, 296, 324, 332 |
| CviKI_1 | RGCY | 4 cut(s) | 136, 296, 324, 332 |
| CviQI | GTAC | 1 cut(s) | 451 |
| DpnI | GATC | 4 cut(s) | 118, 309, 339, 459 |
| DpnII | GATC | 4 cut(s) | 116, 307, 337, 457 |
| DraIII | CACNNNGTG | 1 cut(s) | 213 |
| FaeI | CATG | 4 cut(s) | 145, 166, 196, 213 |
| FaiI | YATR | 9 cut(s) | 143, 164, 194, 211, 284, 368, 396, 424, 475 |
| FatI | CATG | 4 cut(s) | 141, 162, 192, 209 |
| Fnu4HI | GCNGC | 2 cut(s) | 47, 294 |
| FokI | GGATG | 1 cut(s) | 70 |
| Fsp4HI | GCNGC | 2 cut(s) | 47, 294 |
| FspBI | CTAG | 2 cut(s) | 114, 228 |
| GluI | GCNGC | 2 cut(s) | 47, 294 |
| HapII | CCGG | 1 cut(s) | 268 |
| Hin1II | CATG | 4 cut(s) | 145, 166, 196, 213 |
| HinfI | GANTC | 1 cut(s) | 251 |
| HpaII | CCGG | 1 cut(s) | 268 |
| HphI | GGTGA | 2 cut(s) | 4, 110 |
| Hpy166II | GTNNAC | 2 cut(s) | 277, 383 |
| Hpy188III | TCNNGA | 1 cut(s) | 142 |
| Hpy8I | GTNNAC | 2 cut(s) | 277, 383 |
| HpyCH4III | ACNGT | 2 cut(s) | 32, 472 |
| HpyCH4V | TGCA | 1 cut(s) | 49 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 43, 198 |
| Hsp92II | CATG | 4 cut(s) | 145, 166, 196, 213 |
| Kzo9I | GATC | 4 cut(s) | 116, 307, 337, 457 |
| LpnPI | CCDG | 2 cut(s) | 281, 313 |
| Lsp1109I | GCAGC | 2 cut(s) | 33, 305 |
| LweI | GCATC | 1 cut(s) | 168 |
| MaeI | CTAG | 2 cut(s) | 114, 228 |
| MaeIII | GTNAC | 1 cut(s) | 170 |
| MalI | GATC | 4 cut(s) | 118, 309, 339, 459 |
| MboI | GATC | 4 cut(s) | 116, 307, 337, 457 |
| MboII | GAAGA | 1 cut(s) | 246 |
| MflI | RGATCY | 2 cut(s) | 116, 337 |
| MluCI | AATT | 1 cut(s) | 349 |
| MnlI | CCTC | 3 cut(s) | 26, 250, 396 |
| MseI | TTAA | 2 cut(s) | 264, 464 |
| MspI | CCGG | 1 cut(s) | 268 |
| MspR9I | CCNGG | 1 cut(s) | 269 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 43, 198 |
| NciI | CCSGG | 1 cut(s) | 269 |
| NdeII | GATC | 4 cut(s) | 116, 307, 337, 457 |
| NlaIII | CATG | 4 cut(s) | 145, 166, 196, 213 |
| NspI | RCATGY | 1 cut(s) | 196 |
| PagI | TCATGA | 1 cut(s) | 141 |
| PfeI | GAWTC | 1 cut(s) | 251 |
| PkrI | GCNGC | 2 cut(s) | 48, 295 |
| PstI | CTGCAG | 1 cut(s) | 51 |
| PsuI | RGATCY | 2 cut(s) | 116, 337 |
| RsaI | GTAC | 1 cut(s) | 452 |
| RsaNI | GTAC | 1 cut(s) | 451 |
| SaqAI | TTAA | 2 cut(s) | 264, 464 |
| SatI | GCNGC | 2 cut(s) | 47, 294 |
| Sau3AI | GATC | 4 cut(s) | 116, 307, 337, 457 |
| ScrFI | CCNGG | 1 cut(s) | 269 |
| SetI | ASST | 5 cut(s) | 229, 242, 298, 326, 388 |
| SfaNI | GCATC | 1 cut(s) | 168 |
| SfcI | CTRYAG | 1 cut(s) | 47 |
| Sse9I | AATT | 1 cut(s) | 349 |
| SsiI | CCGC | 1 cut(s) | 190 |
| SspMI | CTAG | 2 cut(s) | 114, 228 |
| StyD4I | CCNGG | 1 cut(s) | 267 |
| TaaI | ACNGT | 2 cut(s) | 32, 472 |
| TasI | AATT | 1 cut(s) | 349 |
| TfiI | GAWTC | 1 cut(s) | 251 |
| Tru1I | TTAA | 2 cut(s) | 264, 464 |
| Tru9I | TTAA | 2 cut(s) | 264, 464 |
| TscAI | CASTG | 1 cut(s) | 156 |
| TseI | GCWGC | 2 cut(s) | 46, 293 |
| TspGWI | ACGGA | 1 cut(s) | 350 |
| TspRI | CASTG | 1 cut(s) | 156 |
| XceI | RCATGY | 1 cut(s) | 196 |
| XspI | CTAG | 2 cut(s) | 114, 228 |