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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD01G1021400.v1.1 |
| rosa_chinensis | RchiOBHm_Chr6g0262631 |
| rosa_multiflora | Rmu_co8495177.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00027120 Rroxscaffold_1G00030820 Rroxscaffold_1G00030830 Rroxscaffold_2G00107650 Rroxscaffold_2G00119820 Rroxscaffold_2G00126320 Rroxscaffold_3G00218550 Rroxscaffold_3G00218560 Rroxscaffold_4G00313930 Rroxscaffold_5G00335180 Rroxscaffold_5G00345530 Rroxscaffold_5G00350030 Rroxscaffold_5G00369130 Rroxscaffold_6G00388470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AluBI | AGCT | 2 cut(s) | 110, 143 |
| AluI | AGCT | 2 cut(s) | 110, 143 |
| ApeKI | GCWGC | 6 cut(s) | 24, 104, 107, 130, 140, 400 |
| AspS9I | GGNCC | 2 cut(s) | 49, 328 |
| AsuHPI | GGTGA | 4 cut(s) | 160, 199, 238, 277 |
| AvaII | GGWCC | 2 cut(s) | 49, 328 |
| BbvI | GCAGC | 6 cut(s) | 11, 116, 119, 142, 152, 412 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 27, 61 |
| BfaI | CTAG | 1 cut(s) | 35 |
| BfmI | CTRYAG | 1 cut(s) | 102 |
| BisI | GCNGC | 6 cut(s) | 25, 105, 108, 131, 141, 401 |
| BlsI | GCNGC | 6 cut(s) | 26, 106, 109, 132, 142, 402 |
| Bme18I | GGWCC | 2 cut(s) | 49, 328 |
| BmgT120I | GGNCC | 2 cut(s) | 49, 328 |
| BmiI | GGNNCC | 1 cut(s) | 51 |
| BmsI | GCATC | 1 cut(s) | 324 |
| BpuEI | CTTGAG | 3 cut(s) | 172, 211, 250 |
| BsaJI | CCNNGG | 2 cut(s) | 12, 324 |
| Bse1I | ACTGG | 1 cut(s) | 331 |
| BseDI | CCNNGG | 2 cut(s) | 12, 324 |
| BseGI | GGATG | 1 cut(s) | 94 |
| BseMII | CTCAG | 1 cut(s) | 318 |
| BseNI | ACTGG | 1 cut(s) | 331 |
| BseXI | GCAGC | 6 cut(s) | 11, 116, 119, 142, 152, 412 |
| BsgI | GTGCAG | 1 cut(s) | 419 |
| BslFI | GGGAC | 1 cut(s) | 35 |
| BsmFI | GGGAC | 1 cut(s) | 35 |
| BspCNI | CTCAG | 1 cut(s) | 317 |
| BspLI | GGNNCC | 1 cut(s) | 51 |
| BspMAI | CTGCAG | 1 cut(s) | 106 |
| BsrI | ACTGG | 1 cut(s) | 331 |
| BssECI | CCNNGG | 2 cut(s) | 12, 324 |
| Bst6I | CTCTTC | 5 cut(s) | 170, 209, 248, 287, 325 |
| BstDEI | CTNAG | 1 cut(s) | 304 |
| BstDSI | CCRYGG | 1 cut(s) | 12 |
| BstEII | GGTNACC | 1 cut(s) | 7 |
| BstF5I | GGATG | 1 cut(s) | 94 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 127 |
| BstPI | GGTNACC | 1 cut(s) | 7 |
| BstSFI | CTRYAG | 1 cut(s) | 102 |
| BstV1I | GCAGC | 6 cut(s) | 11, 116, 119, 142, 152, 412 |
| BtgI | CCRYGG | 1 cut(s) | 12 |
| BtsCI | GGATG | 1 cut(s) | 94 |
| Cfr13I | GGNCC | 2 cut(s) | 49, 328 |
| CviJI | RGCY | 3 cut(s) | 24, 110, 143 |
| CviKI_1 | RGCY | 3 cut(s) | 24, 110, 143 |
| DdeI | CTNAG | 1 cut(s) | 304 |
| Eam1104I | CTCTTC | 5 cut(s) | 170, 209, 248, 287, 325 |
| EarI | CTCTTC | 5 cut(s) | 170, 209, 248, 287, 325 |
| Eco47I | GGWCC | 2 cut(s) | 49, 328 |
| Eco91I | GGTNACC | 1 cut(s) | 7 |
| EcoO65I | GGTNACC | 1 cut(s) | 7 |
| FaiI | YATR | 1 cut(s) | 353 |
| FaqI | GGGAC | 1 cut(s) | 35 |
| Fnu4HI | GCNGC | 6 cut(s) | 25, 105, 108, 131, 141, 401 |
| FokI | GGATG | 1 cut(s) | 81 |
| Fsp4HI | GCNGC | 6 cut(s) | 25, 105, 108, 131, 141, 401 |
| FspBI | CTAG | 1 cut(s) | 35 |
| GluI | GCNGC | 6 cut(s) | 25, 105, 108, 131, 141, 401 |
| HinfI | GANTC | 1 cut(s) | 365 |
| HphI | GGTGA | 4 cut(s) | 160, 199, 238, 277 |
| Hpy166II | GTNNAC | 3 cut(s) | 197, 236, 275 |
| Hpy188III | TCNNGA | 1 cut(s) | 380 |
| Hpy8I | GTNNAC | 3 cut(s) | 197, 236, 275 |
| HpyCH4V | TGCA | 4 cut(s) | 104, 121, 140, 400 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 127 |
| HpyF3I | CTNAG | 1 cut(s) | 304 |
| LpnPI | CCDG | 3 cut(s) | 114, 344, 365 |
| Lsp1109I | GCAGC | 6 cut(s) | 11, 116, 119, 142, 152, 412 |
| LweI | GCATC | 1 cut(s) | 324 |
| MaeI | CTAG | 1 cut(s) | 35 |
| MaeIII | GTNAC | 2 cut(s) | 7, 145 |
| MboII | GAAGA | 9 cut(s) | 74, 77, 80, 83, 157, 196, 235, 274, 312 |
| MnlI | CCTC | 5 cut(s) | 63, 108, 334, 371, 385 |
| MspA1I | CMGCKG | 1 cut(s) | 143 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 127 |
| NlaIV | GGNNCC | 1 cut(s) | 51 |
| NmuCI | GTSAC | 1 cut(s) | 7 |
| PfeI | GAWTC | 1 cut(s) | 365 |
| PkrI | GCNGC | 6 cut(s) | 26, 106, 109, 132, 142, 402 |
| PspEI | GGTNACC | 1 cut(s) | 7 |
| PspN4I | GGNNCC | 1 cut(s) | 51 |
| PspPI | GGNCC | 2 cut(s) | 49, 328 |
| PstI | CTGCAG | 1 cut(s) | 106 |
| PvuII | CAGCTG | 1 cut(s) | 143 |
| SatI | GCNGC | 6 cut(s) | 25, 105, 108, 131, 141, 401 |
| Sau96I | GGNCC | 2 cut(s) | 49, 328 |
| SetI | ASST | 4 cut(s) | 112, 145, 161, 363 |
| SfaNI | GCATC | 1 cut(s) | 324 |
| SfcI | CTRYAG | 1 cut(s) | 102 |
| SinI | GGWCC | 2 cut(s) | 49, 328 |
| SmlI | CTYRAG | 3 cut(s) | 187, 226, 265 |
| SmoI | CTYRAG | 3 cut(s) | 187, 226, 265 |
| SspMI | CTAG | 1 cut(s) | 35 |
| TaqI | TCGA | 2 cut(s) | 357, 363 |
| TaqII | GACCGA | 2 cut(s) | 37, 316 |
| TfiI | GAWTC | 1 cut(s) | 365 |
| TseFI | GTSAC | 1 cut(s) | 7 |
| TseI | GCWGC | 6 cut(s) | 24, 104, 107, 130, 140, 400 |
| Tsp45I | GTSAC | 1 cut(s) | 7 |
| TspDTI | ATGAA | 1 cut(s) | 83 |
| TspGWI | ACGGA | 1 cut(s) | 29 |
| VpaK11BI | GGWCC | 2 cut(s) | 49, 328 |
| XspI | CTAG | 1 cut(s) | 35 |