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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD01G1021400.v1.1 |
| rosa_chinensis | RchiOBHm_Chr6g0262631 |
| rosa_multiflora | Rmu_co8495177.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00027120 Rroxscaffold_1G00030820 Rroxscaffold_1G00030830 Rroxscaffold_2G00107650 Rroxscaffold_2G00119820 Rroxscaffold_2G00126320 Rroxscaffold_3G00218550 Rroxscaffold_3G00218560 Rroxscaffold_4G00313930 Rroxscaffold_5G00335180 Rroxscaffold_5G00345530 Rroxscaffold_5G00350030 Rroxscaffold_5G00369130 Rroxscaffold_6G00388470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 257 |
| AccBSI | CCGCTC | 1 cut(s) | 133 |
| AciI | CCGC | 2 cut(s) | 10, 133 |
| AclWI | GGATC | 1 cut(s) | 20 |
| AcsI | RAATTY | 2 cut(s) | 18, 248 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 259 |
| AflII | CTTAAG | 1 cut(s) | 209 |
| AgsI | TTSAA | 5 cut(s) | 32, 112, 200, 274, 299 |
| AluBI | AGCT | 2 cut(s) | 293, 321 |
| AluI | AGCT | 2 cut(s) | 293, 321 |
| AlwI | GGATC | 1 cut(s) | 20 |
| ApoI | RAATTY | 2 cut(s) | 18, 248 |
| AsuII | TTCGAA | 1 cut(s) | 279 |
| BbsI | GAAGAC | 1 cut(s) | 288 |
| BccI | CCATC | 1 cut(s) | 208 |
| BfrI | CTTAAG | 1 cut(s) | 209 |
| BfuAI | ACCTGC | 1 cut(s) | 257 |
| BmsI | GCATC | 2 cut(s) | 165, 253 |
| BpiI | GAAGAC | 1 cut(s) | 288 |
| Bpu14I | TTCGAA | 1 cut(s) | 279 |
| BpuEI | CTTGAG | 1 cut(s) | 293 |
| BsaBI | GATNNNNATC | 1 cut(s) | 87 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 259 |
| Bse8I | GATNNNNATC | 1 cut(s) | 87 |
| BseGI | GGATG | 2 cut(s) | 133, 268 |
| BseJI | GATNNNNATC | 1 cut(s) | 87 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 259 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 259 |
| Bsp119I | TTCGAA | 1 cut(s) | 279 |
| Bsp143I | GATC | 3 cut(s) | 3, 12, 88 |
| BspACI | CCGC | 2 cut(s) | 10, 133 |
| BspMI | ACCTGC | 1 cut(s) | 257 |
| BspPI | GGATC | 1 cut(s) | 20 |
| BspQI | GCTCTTC | 1 cut(s) | 201 |
| BspT104I | TTCGAA | 1 cut(s) | 279 |
| BspTI | CTTAAG | 1 cut(s) | 209 |
| BsrBI | CCGCTC | 1 cut(s) | 133 |
| BssMI | GATC | 3 cut(s) | 3, 12, 88 |
| Bst6I | CTCTTC | 1 cut(s) | 201 |
| BstAFI | CTTAAG | 1 cut(s) | 209 |
| BstBI | TTCGAA | 1 cut(s) | 279 |
| BstC8I | GCNNGC | 1 cut(s) | 291 |
| BstF5I | GGATG | 2 cut(s) | 133, 268 |
| BstKTI | GATC | 3 cut(s) | 6, 15, 91 |
| BstMBI | GATC | 3 cut(s) | 3, 12, 88 |
| BstNSI | RCATGY | 1 cut(s) | 289 |
| BstV2I | GAAGAC | 1 cut(s) | 288 |
| BtsCI | GGATG | 2 cut(s) | 133, 268 |
| BveI | ACCTGC | 1 cut(s) | 257 |
| Cac8I | GCNNGC | 1 cut(s) | 291 |
| CviAII | CATG | 1 cut(s) | 286 |
| CviJI | RGCY | 3 cut(s) | 194, 293, 321 |
| CviKI_1 | RGCY | 3 cut(s) | 194, 293, 321 |
| DpnI | GATC | 3 cut(s) | 5, 14, 90 |
| DpnII | GATC | 3 cut(s) | 3, 12, 88 |
| Eam1104I | CTCTTC | 1 cut(s) | 201 |
| EarI | CTCTTC | 1 cut(s) | 201 |
| EcoRI | GAATTC | 1 cut(s) | 18 |
| FaeI | CATG | 1 cut(s) | 289 |
| FaiI | YATR | 3 cut(s) | 125, 161, 287 |
| FatI | CATG | 1 cut(s) | 285 |
| FokI | GGATG | 2 cut(s) | 140, 275 |
| Hin1II | CATG | 1 cut(s) | 289 |
| HincII | GTYRAC | 1 cut(s) | 168 |
| HindII | GTYRAC | 1 cut(s) | 168 |
| HindIII | AAGCTT | 2 cut(s) | 291, 319 |
| HinfI | GANTC | 2 cut(s) | 83, 218 |
| Hpy166II | GTNNAC | 1 cut(s) | 168 |
| Hpy188I | TCNGA | 2 cut(s) | 17, 88 |
| Hpy8I | GTNNAC | 1 cut(s) | 168 |
| HpyCH4V | TGCA | 2 cut(s) | 266, 289 |
| Hsp92II | CATG | 1 cut(s) | 289 |
| Kzo9I | GATC | 3 cut(s) | 3, 12, 88 |
| LguI | GCTCTTC | 1 cut(s) | 201 |
| LpnPI | CCDG | 1 cut(s) | 252 |
| LweI | GCATC | 2 cut(s) | 165, 253 |
| MalI | GATC | 3 cut(s) | 5, 14, 90 |
| MbiI | CCGCTC | 1 cut(s) | 133 |
| MboI | GATC | 3 cut(s) | 3, 12, 88 |
| MboII | GAAGA | 3 cut(s) | 44, 188, 293 |
| MluCI | AATT | 3 cut(s) | 18, 43, 248 |
| MmeI | TCCRAC | 1 cut(s) | 5 |
| MnlI | CCTC | 3 cut(s) | 136, 232, 236 |
| MseI | TTAA | 4 cut(s) | 138, 210, 243, 315 |
| MspCI | CTTAAG | 1 cut(s) | 209 |
| NdeII | GATC | 3 cut(s) | 3, 12, 88 |
| NlaIII | CATG | 1 cut(s) | 289 |
| NspI | RCATGY | 1 cut(s) | 289 |
| NspV | TTCGAA | 1 cut(s) | 279 |
| PciSI | GCTCTTC | 1 cut(s) | 201 |
| PfeI | GAWTC | 2 cut(s) | 83, 218 |
| SapI | GCTCTTC | 1 cut(s) | 201 |
| SaqAI | TTAA | 4 cut(s) | 138, 210, 243, 315 |
| Sau3AI | GATC | 3 cut(s) | 3, 12, 88 |
| SetI | ASST | 6 cut(s) | 205, 243, 271, 295, 315, 323 |
| SfaNI | GCATC | 2 cut(s) | 165, 253 |
| SfuI | TTCGAA | 1 cut(s) | 279 |
| SgeI | CNNG | 8 cut(s) | 19, 104, 267, 279, 286, 298, 302, 322 |
| SmlI | CTYRAG | 2 cut(s) | 209, 308 |
| SmoI | CTYRAG | 2 cut(s) | 209, 308 |
| Sse9I | AATT | 3 cut(s) | 18, 43, 248 |
| SsiI | CCGC | 2 cut(s) | 10, 133 |
| SspI | AATATT | 1 cut(s) | 155 |
| TaqI | TCGA | 1 cut(s) | 279 |
| TasI | AATT | 3 cut(s) | 18, 43, 248 |
| TfiI | GAWTC | 2 cut(s) | 83, 218 |
| Tru1I | TTAA | 4 cut(s) | 138, 210, 243, 315 |
| Tru9I | TTAA | 4 cut(s) | 138, 210, 243, 315 |
| TspDTI | ATGAA | 1 cut(s) | 176 |
| Vha464I | CTTAAG | 1 cut(s) | 209 |
| XapI | RAATTY | 2 cut(s) | 18, 248 |
| XceI | RCATGY | 1 cut(s) | 289 |