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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g43350 |
| rosa_chinensis | RchiOBHm_Chr2g0159671 RchiOBHm_Chr6g0251691 |
| rosa_laevigata | RLG00000001443 RLG00000021172 |
| rosa_multiflora | Rmu_sc0011502.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00033700 Rroxscaffold_1G00036140 Rroxscaffold_2G00090330 |
| rosa_rugosa | Rorug02G0477700 Rorug05G0220600 Rorug05G0220700 Rorug06G0035000 |
| rosa_samantha | Rh2AG544600 Rh2BG557400 Rh2CG527700 Rh2DG566500 Rh3BG266300 Rh6AG013600 Rh6AG092700 Rh6CG080300 Rh6DG075700 |
| rosa_wichuraiana | Rw2G045040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 1 cut(s) | 232 |
| AfaI | GTAC | 3 cut(s) | 350, 426, 460 |
| AflIII | ACRYGT | 1 cut(s) | 368 |
| AgsI | TTSAA | 1 cut(s) | 329 |
| AhlI | ACTAGT | 1 cut(s) | 427 |
| AjnI | CCWGG | 1 cut(s) | 418 |
| AluBI | AGCT | 3 cut(s) | 13, 193, 245 |
| AluI | AGCT | 3 cut(s) | 13, 193, 245 |
| Alw26I | GTCTC | 1 cut(s) | 359 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 1 cut(s) | 114 |
| ApoI | RAATTY | 1 cut(s) | 232 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 296 |
| AspS9I | GGNCC | 2 cut(s) | 59, 404 |
| AvaII | GGWCC | 2 cut(s) | 59, 404 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbsI | GAAGAC | 1 cut(s) | 287 |
| BbvI | GCAGC | 1 cut(s) | 126 |
| BccI | CCATC | 1 cut(s) | 50 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 382, 416 |
| BciT130I | CCWGG | 1 cut(s) | 420 |
| BcoDI | GTCTC | 1 cut(s) | 359 |
| BcuI | ACTAGT | 1 cut(s) | 427 |
| BfaI | CTAG | 2 cut(s) | 428, 453 |
| BisI | GCNGC | 1 cut(s) | 115 |
| BlsI | GCNGC | 1 cut(s) | 116 |
| Bme1390I | CCNGG | 1 cut(s) | 420 |
| Bme18I | GGWCC | 2 cut(s) | 59, 404 |
| BmgT120I | GGNCC | 2 cut(s) | 59, 404 |
| BmrFI | CCNGG | 1 cut(s) | 420 |
| BpiI | GAAGAC | 1 cut(s) | 287 |
| BsaAI | YACGTR | 2 cut(s) | 136, 352 |
| BseBI | CCWGG | 1 cut(s) | 420 |
| BseRI | GAGGAG | 1 cut(s) | 5 |
| BseXI | GCAGC | 1 cut(s) | 126 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsiWI | CGTACG | 1 cut(s) | 348 |
| BsmAI | GTCTC | 1 cut(s) | 359 |
| BsmI | GAATGC | 1 cut(s) | 296 |
| BsnI | GGCC | 1 cut(s) | 5 |
| BspANI | GGCC | 1 cut(s) | 5 |
| Bst2UI | CCWGG | 1 cut(s) | 420 |
| Bst4CI | ACNGT | 1 cut(s) | 176 |
| Bst6I | CTCTTC | 1 cut(s) | 432 |
| BstBAI | YACGTR | 2 cut(s) | 136, 352 |
| BstDEI | CTNAG | 1 cut(s) | 84 |
| BstMAI | GTCTC | 1 cut(s) | 359 |
| BstNI | CCWGG | 1 cut(s) | 420 |
| BstNSI | RCATGY | 2 cut(s) | 71, 372 |
| BstSCI | CCNGG | 1 cut(s) | 418 |
| BstSNI | TACGTA | 1 cut(s) | 136 |
| BstV1I | GCAGC | 1 cut(s) | 126 |
| BstV2I | GAAGAC | 1 cut(s) | 287 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| Cfr13I | GGNCC | 2 cut(s) | 59, 404 |
| Csp6I | GTAC | 3 cut(s) | 349, 425, 459 |
| CviAII | CATG | 3 cut(s) | 68, 369, 480 |
| CviJI | RGCY | 5 cut(s) | 5, 13, 193, 245, 387 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 13, 193, 245, 387 |
| CviQI | GTAC | 3 cut(s) | 349, 425, 459 |
| DdeI | CTNAG | 1 cut(s) | 84 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 1 cut(s) | 432 |
| EarI | CTCTTC | 1 cut(s) | 432 |
| Eco105I | TACGTA | 1 cut(s) | 136 |
| Eco47I | GGWCC | 2 cut(s) | 59, 404 |
| EcoRII | CCWGG | 1 cut(s) | 418 |
| FaeI | CATG | 3 cut(s) | 71, 372, 483 |
| FatI | CATG | 3 cut(s) | 67, 368, 479 |
| Fnu4HI | GCNGC | 1 cut(s) | 115 |
| Fsp4HI | GCNGC | 1 cut(s) | 115 |
| FspBI | CTAG | 2 cut(s) | 428, 453 |
| GluI | GCNGC | 1 cut(s) | 115 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| Hin1II | CATG | 3 cut(s) | 71, 372, 483 |
| HinfI | GANTC | 2 cut(s) | 227, 399 |
| Hpy166II | GTNNAC | 3 cut(s) | 62, 166, 425 |
| Hpy188I | TCNGA | 1 cut(s) | 404 |
| Hpy188III | TCNNGA | 2 cut(s) | 308, 453 |
| Hpy8I | GTNNAC | 3 cut(s) | 62, 166, 425 |
| HpyAV | CCTTC | 2 cut(s) | 253, 286 |
| HpyCH4III | ACNGT | 1 cut(s) | 176 |
| HpyCH4IV | ACGT | 2 cut(s) | 135, 351 |
| HpyCH4V | TGCA | 3 cut(s) | 71, 114, 180 |
| HpyF3I | CTNAG | 1 cut(s) | 84 |
| HpySE526I | ACGT | 2 cut(s) | 135, 351 |
| Hsp92II | CATG | 3 cut(s) | 71, 372, 483 |
| LmnI | GCTCC | 1 cut(s) | 18 |
| LpnPI | CCDG | 5 cut(s) | 183, 234, 321, 405, 432 |
| Lsp1109I | GCAGC | 1 cut(s) | 126 |
| MaeI | CTAG | 2 cut(s) | 428, 453 |
| MaeII | ACGT | 2 cut(s) | 135, 351 |
| MboII | GAAGA | 2 cut(s) | 292, 449 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 1 cut(s) | 232 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 1 cut(s) | 408 |
| MmeI | TCCRAC | 2 cut(s) | 325, 382 |
| MnlI | CCTC | 8 cut(s) | 26, 85, 152, 304, 368, 377, 435, 449 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MroXI | GAANNNNTTC | 1 cut(s) | 296 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 3 cut(s) | 9, 254, 318 |
| MslI | CAYNNNNRTG | 1 cut(s) | 136 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspR9I | CCNGG | 1 cut(s) | 420 |
| Mva1269I | GAATGC | 1 cut(s) | 296 |
| MvaI | CCWGG | 1 cut(s) | 420 |
| NlaIII | CATG | 3 cut(s) | 71, 372, 483 |
| NspI | RCATGY | 2 cut(s) | 71, 372 |
| PciI | ACATGT | 1 cut(s) | 368 |
| PctI | GAATGC | 1 cut(s) | 296 |
| PdmI | GAANNNNTTC | 1 cut(s) | 296 |
| PfeI | GAWTC | 1 cut(s) | 227 |
| Pfl23II | CGTACG | 1 cut(s) | 348 |
| PkrI | GCNGC | 1 cut(s) | 116 |
| PleI | GAGTC | 1 cut(s) | 407 |
| PpsI | GAGTC | 1 cut(s) | 407 |
| Ppu21I | YACGTR | 2 cut(s) | 136, 352 |
| PscI | ACATGT | 1 cut(s) | 368 |
| Psp6I | CCWGG | 1 cut(s) | 418 |
| PspGI | CCWGG | 1 cut(s) | 418 |
| PspLI | CGTACG | 1 cut(s) | 348 |
| PspPI | GGNCC | 2 cut(s) | 59, 404 |
| RsaI | GTAC | 3 cut(s) | 350, 426, 460 |
| RsaNI | GTAC | 3 cut(s) | 349, 425, 459 |
| RseI | CAYNNNNRTG | 1 cut(s) | 136 |
| SaqAI | TTAA | 3 cut(s) | 9, 254, 318 |
| SatI | GCNGC | 1 cut(s) | 115 |
| Sau96I | GGNCC | 2 cut(s) | 59, 404 |
| SchI | GAGTC | 1 cut(s) | 408 |
| ScrFI | CCNGG | 1 cut(s) | 420 |
| SinI | GGWCC | 2 cut(s) | 59, 404 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 136 |
| SnaBI | TACGTA | 1 cut(s) | 136 |
| SpeI | ACTAGT | 1 cut(s) | 427 |
| Sse9I | AATT | 1 cut(s) | 232 |
| SspI | AATATT | 1 cut(s) | 28 |
| SspMI | CTAG | 2 cut(s) | 428, 453 |
| StyD4I | CCNGG | 1 cut(s) | 418 |
| TaaI | ACNGT | 1 cut(s) | 176 |
| TaiI | ACGT | 2 cut(s) | 138, 354 |
| TaqI | TCGA | 1 cut(s) | 48 |
| TasI | AATT | 1 cut(s) | 232 |
| TatI | WGTACW | 1 cut(s) | 424 |
| TfiI | GAWTC | 1 cut(s) | 227 |
| Tru1I | TTAA | 3 cut(s) | 9, 254, 318 |
| Tru9I | TTAA | 3 cut(s) | 9, 254, 318 |
| TseI | GCWGC | 1 cut(s) | 114 |
| TspDTI | ATGAA | 7 cut(s) | 120, 228, 240, 272, 293, 351, 438 |
| VpaK11BI | GGWCC | 2 cut(s) | 59, 404 |
| XapI | RAATTY | 1 cut(s) | 232 |
| XbaI | TCTAGA | 1 cut(s) | 452 |
| XceI | RCATGY | 2 cut(s) | 71, 372 |
| XmnI | GAANNNNTTC | 1 cut(s) | 296 |
| XspI | CTAG | 2 cut(s) | 428, 453 |