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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0001218.1_g000051 |
| rosa_roxburghii | Rroxscaffold_2G00088580 Rroxscaffold_2G00091280 |
| rosa_rugosa | Rorug07G0202600.1 |
| rosa_samantha | Rh1AG329100 Rh1DG304000 Rh2AG183900 Rh2AG363100 Rh2BG380700 Rh4AG001700 Rh4AG112000 Rh5AG202700 Rh6AG079400 Rh6BG156600 Rh6BG176400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 221 |
| AccIII | TCCGGA | 1 cut(s) | 342 |
| AcoI | YGGCCR | 1 cut(s) | 156 |
| AcsI | RAATTY | 2 cut(s) | 283, 359 |
| AflIII | ACRYGT | 1 cut(s) | 312 |
| AgsI | TTSAA | 1 cut(s) | 41 |
| AjnI | CCWGG | 1 cut(s) | 144 |
| AluBI | AGCT | 3 cut(s) | 53, 70, 197 |
| AluI | AGCT | 3 cut(s) | 53, 70, 197 |
| Ama87I | CYCGRG | 1 cut(s) | 198 |
| Aor13HI | TCCGGA | 1 cut(s) | 342 |
| AoxI | GGCC | 1 cut(s) | 156 |
| ApeKI | GCWGC | 2 cut(s) | 11, 53 |
| ApoI | RAATTY | 2 cut(s) | 283, 359 |
| AvaI | CYCGRG | 1 cut(s) | 198 |
| BanI | GGYRCC | 1 cut(s) | 221 |
| BbvI | GCAGC | 2 cut(s) | 23, 40 |
| BccI | CCATC | 1 cut(s) | 20 |
| BciT130I | CCWGG | 1 cut(s) | 146 |
| BfaI | CTAG | 1 cut(s) | 50 |
| BfmI | CTRYAG | 1 cut(s) | 216 |
| BisI | GCNGC | 2 cut(s) | 12, 54 |
| BlsI | GCNGC | 2 cut(s) | 13, 55 |
| Bme1390I | CCNGG | 1 cut(s) | 146 |
| BmeT110I | CYCGRG | 1 cut(s) | 198 |
| BmiI | GGNNCC | 1 cut(s) | 223 |
| BmrFI | CCNGG | 1 cut(s) | 146 |
| BmsI | GCATC | 1 cut(s) | 97 |
| BsaJI | CCNNGG | 2 cut(s) | 145, 159 |
| BsaWI | WCCGGW | 1 cut(s) | 342 |
| Bse1I | ACTGG | 1 cut(s) | 186 |
| Bse3DI | GCAATG | 1 cut(s) | 225 |
| BseAI | TCCGGA | 1 cut(s) | 342 |
| BseBI | CCWGG | 1 cut(s) | 146 |
| BseDI | CCNNGG | 2 cut(s) | 145, 159 |
| BseGI | GGATG | 1 cut(s) | 112 |
| BseMI | GCAATG | 1 cut(s) | 225 |
| BseNI | ACTGG | 1 cut(s) | 186 |
| BseRI | GAGGAG | 1 cut(s) | 313 |
| BseXI | GCAGC | 2 cut(s) | 23, 40 |
| BshFI | GGCC | 1 cut(s) | 158 |
| BshNI | GGYRCC | 1 cut(s) | 221 |
| BsiHKCI | CYCGRG | 1 cut(s) | 198 |
| BsiSI | CCGG | 1 cut(s) | 343 |
| BsnI | GGCC | 1 cut(s) | 158 |
| BsoBI | CYCGRG | 1 cut(s) | 198 |
| Bsp13I | TCCGGA | 1 cut(s) | 342 |
| Bsp143I | GATC | 1 cut(s) | 190 |
| BspANI | GGCC | 1 cut(s) | 158 |
| BspEI | TCCGGA | 1 cut(s) | 342 |
| BspLI | GGNNCC | 1 cut(s) | 223 |
| BspT107I | GGYRCC | 1 cut(s) | 221 |
| BsrDI | GCAATG | 1 cut(s) | 225 |
| BsrI | ACTGG | 1 cut(s) | 186 |
| BssECI | CCNNGG | 2 cut(s) | 145, 159 |
| BssMI | GATC | 1 cut(s) | 190 |
| Bst2UI | CCWGG | 1 cut(s) | 146 |
| BstF5I | GGATG | 1 cut(s) | 112 |
| BstKTI | GATC | 1 cut(s) | 193 |
| BstMBI | GATC | 1 cut(s) | 190 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 258 |
| BstNI | CCWGG | 1 cut(s) | 146 |
| BstNSI | RCATGY | 1 cut(s) | 316 |
| BstSCI | CCNGG | 1 cut(s) | 144 |
| BstSFI | CTRYAG | 1 cut(s) | 216 |
| BstV1I | GCAGC | 2 cut(s) | 23, 40 |
| BsuRI | GGCC | 1 cut(s) | 158 |
| BtsCI | GGATG | 1 cut(s) | 112 |
| CviAII | CATG | 2 cut(s) | 206, 313 |
| CviJI | RGCY | 5 cut(s) | 53, 70, 158, 197, 321 |
| CviKI_1 | RGCY | 5 cut(s) | 53, 70, 158, 197, 321 |
| DpnI | GATC | 1 cut(s) | 192 |
| DpnII | GATC | 1 cut(s) | 190 |
| EaeI | YGGCCR | 1 cut(s) | 156 |
| Eco88I | CYCGRG | 1 cut(s) | 198 |
| EcoRII | CCWGG | 1 cut(s) | 144 |
| FaeI | CATG | 2 cut(s) | 209, 316 |
| FatI | CATG | 2 cut(s) | 205, 312 |
| Fnu4HI | GCNGC | 2 cut(s) | 12, 54 |
| FokI | GGATG | 1 cut(s) | 119 |
| Fsp4HI | GCNGC | 2 cut(s) | 12, 54 |
| FspBI | CTAG | 1 cut(s) | 50 |
| GluI | GCNGC | 2 cut(s) | 12, 54 |
| HaeIII | GGCC | 1 cut(s) | 158 |
| HapII | CCGG | 1 cut(s) | 343 |
| Hin1II | CATG | 2 cut(s) | 209, 316 |
| HinfI | GANTC | 1 cut(s) | 16 |
| HpaII | CCGG | 1 cut(s) | 343 |
| Hpy188III | TCNNGA | 1 cut(s) | 343 |
| HpyAV | CCTTC | 2 cut(s) | 91, 97 |
| HpyCH4V | TGCA | 4 cut(s) | 56, 176, 205, 242 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 258 |
| Hsp92II | CATG | 2 cut(s) | 209, 316 |
| Kpn2I | TCCGGA | 1 cut(s) | 342 |
| Kzo9I | GATC | 1 cut(s) | 190 |
| LpnPI | CCDG | 6 cut(s) | 56, 131, 158, 167, 247, 356 |
| Lsp1109I | GCAGC | 2 cut(s) | 23, 40 |
| LweI | GCATC | 1 cut(s) | 97 |
| MaeI | CTAG | 1 cut(s) | 50 |
| MalI | GATC | 1 cut(s) | 192 |
| MboI | GATC | 1 cut(s) | 190 |
| MboII | GAAGA | 6 cut(s) | 17, 74, 106, 197, 200, 292 |
| MluCI | AATT | 2 cut(s) | 283, 359 |
| MlyI | GAGTC | 1 cut(s) | 10 |
| MnlI | CCTC | 4 cut(s) | 154, 242, 291, 319 |
| MroI | TCCGGA | 1 cut(s) | 342 |
| MseI | TTAA | 1 cut(s) | 126 |
| MslI | CAYNNNNRTG | 1 cut(s) | 230 |
| MspI | CCGG | 1 cut(s) | 343 |
| MspR9I | CCNGG | 1 cut(s) | 146 |
| MvaI | CCWGG | 1 cut(s) | 146 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 258 |
| NdeII | GATC | 1 cut(s) | 190 |
| NlaIII | CATG | 2 cut(s) | 209, 316 |
| NlaIV | GGNNCC | 1 cut(s) | 223 |
| NmeAIII | GCCGAG | 1 cut(s) | 184 |
| NspI | RCATGY | 1 cut(s) | 316 |
| PciI | ACATGT | 1 cut(s) | 312 |
| PkrI | GCNGC | 2 cut(s) | 13, 55 |
| PleI | GAGTC | 1 cut(s) | 10 |
| PpsI | GAGTC | 1 cut(s) | 10 |
| PscI | ACATGT | 1 cut(s) | 312 |
| Psp6I | CCWGG | 1 cut(s) | 144 |
| PspGI | CCWGG | 1 cut(s) | 144 |
| PspN4I | GGNNCC | 1 cut(s) | 223 |
| RseI | CAYNNNNRTG | 1 cut(s) | 230 |
| SaqAI | TTAA | 1 cut(s) | 126 |
| SatI | GCNGC | 2 cut(s) | 12, 54 |
| Sau3AI | GATC | 1 cut(s) | 190 |
| SchI | GAGTC | 1 cut(s) | 10 |
| ScrFI | CCNGG | 1 cut(s) | 146 |
| SetI | ASST | 6 cut(s) | 55, 72, 87, 165, 199, 223 |
| SfaNI | GCATC | 1 cut(s) | 97 |
| SfcI | CTRYAG | 1 cut(s) | 216 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 230 |
| Sse9I | AATT | 2 cut(s) | 283, 359 |
| SspMI | CTAG | 1 cut(s) | 50 |
| StyD4I | CCNGG | 1 cut(s) | 144 |
| TasI | AATT | 2 cut(s) | 283, 359 |
| Tru1I | TTAA | 1 cut(s) | 126 |
| Tru9I | TTAA | 1 cut(s) | 126 |
| TseI | GCWGC | 2 cut(s) | 11, 53 |
| XapI | RAATTY | 2 cut(s) | 283, 359 |
| XceI | RCATGY | 1 cut(s) | 316 |
| XspI | CTAG | 1 cut(s) | 50 |