Nuclear-pore
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0003628.1_g000036 Rmu_sc0003955.1_g000010 Rmu_sc0012314.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00010080 Rroxscaffold_2G00130840 Rroxscaffold_2G00133490 Rroxscaffold_3G00219720 Rroxscaffold_4G00297500 Rroxscaffold_4G00326750 Rroxscaffold_5G00354240 |
| rosa_samantha | Rh2CG222400 Rh5CG174800 Rh5CG248300 Rh6DG091500 |
| rosa_wichuraiana | Rw2G003120 Rw3G017480 Rw5G025600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 228 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 391 |
| AgsI | TTSAA | 4 cut(s) | 31, 209, 250, 455 |
| AleI | CACNNNNGTG | 1 cut(s) | 21 |
| AluBI | AGCT | 4 cut(s) | 216, 271, 404, 409 |
| AluI | AGCT | 4 cut(s) | 216, 271, 404, 409 |
| Alw21I | GWGCWC | 2 cut(s) | 18, 324 |
| Alw44I | GTGCAC | 2 cut(s) | 14, 320 |
| ApaLI | GTGCAC | 2 cut(s) | 14, 320 |
| ApoI | RAATTY | 1 cut(s) | 228 |
| AsuC2I | CCSGG | 1 cut(s) | 41 |
| BaeGI | GKGCMC | 2 cut(s) | 18, 324 |
| Bbv12I | GWGCWC | 2 cut(s) | 18, 324 |
| BciVI | GTATCC | 1 cut(s) | 364 |
| BcnI | CCSGG | 1 cut(s) | 41 |
| BfmI | CTRYAG | 1 cut(s) | 220 |
| BfuI | GTATCC | 1 cut(s) | 364 |
| BlpI | GCTNAGC | 1 cut(s) | 405 |
| Bme1390I | CCNGG | 1 cut(s) | 41 |
| BmrFI | CCNGG | 1 cut(s) | 41 |
| BmsI | GCATC | 3 cut(s) | 125, 290, 324 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 405 |
| BpuMI | CCSGG | 1 cut(s) | 41 |
| Bsa29I | ATCGAT | 1 cut(s) | 332 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 391 |
| BseCI | ATCGAT | 1 cut(s) | 332 |
| BseGI | GGATG | 1 cut(s) | 197 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 391 |
| BseMII | CTCAG | 2 cut(s) | 116, 396 |
| BseSI | GKGCMC | 2 cut(s) | 18, 324 |
| BshVI | ATCGAT | 1 cut(s) | 332 |
| BsiHKAI | GWGCWC | 2 cut(s) | 18, 324 |
| BsiSI | CCGG | 1 cut(s) | 41 |
| BslFI | GGGAC | 1 cut(s) | 92 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 391 |
| BsmFI | GGGAC | 1 cut(s) | 92 |
| Bsp1286I | GDGCHC | 2 cut(s) | 18, 324 |
| Bsp143I | GATC | 1 cut(s) | 441 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 405 |
| BspCNI | CTCAG | 2 cut(s) | 117, 397 |
| BspDI | ATCGAT | 1 cut(s) | 332 |
| BspHI | TCATGA | 1 cut(s) | 292 |
| BssMI | GATC | 1 cut(s) | 441 |
| Bst4CI | ACNGT | 2 cut(s) | 83, 394 |
| Bst6I | CTCTTC | 4 cut(s) | 68, 179, 199, 210 |
| BstC8I | GCNNGC | 1 cut(s) | 18 |
| BstDEI | CTNAG | 2 cut(s) | 125, 405 |
| BstF5I | GGATG | 1 cut(s) | 197 |
| BstKTI | GATC | 1 cut(s) | 444 |
| BstMBI | GATC | 1 cut(s) | 441 |
| BstSCI | CCNGG | 1 cut(s) | 39 |
| BstSFI | CTRYAG | 1 cut(s) | 220 |
| BstSLI | GKGCMC | 2 cut(s) | 18, 324 |
| Bsu15I | ATCGAT | 1 cut(s) | 332 |
| BsuI | GTATCC | 1 cut(s) | 364 |
| BsuTUI | ATCGAT | 1 cut(s) | 332 |
| BtsCI | GGATG | 1 cut(s) | 197 |
| Cac8I | GCNNGC | 1 cut(s) | 18 |
| CciI | TCATGA | 1 cut(s) | 292 |
| ClaI | ATCGAT | 1 cut(s) | 332 |
| CviAII | CATG | 3 cut(s) | 162, 169, 293 |
| CviJI | RGCY | 5 cut(s) | 216, 271, 388, 404, 409 |
| CviKI_1 | RGCY | 5 cut(s) | 216, 271, 388, 404, 409 |
| DdeI | CTNAG | 2 cut(s) | 125, 405 |
| DpnI | GATC | 1 cut(s) | 443 |
| DpnII | GATC | 1 cut(s) | 441 |
| Eam1104I | CTCTTC | 4 cut(s) | 68, 179, 199, 210 |
| EarI | CTCTTC | 4 cut(s) | 68, 179, 199, 210 |
| FaeI | CATG | 3 cut(s) | 165, 172, 296 |
| FaiI | YATR | 8 cut(s) | 163, 170, 266, 294, 303, 349, 368, 469 |
| FaqI | GGGAC | 1 cut(s) | 92 |
| FatI | CATG | 3 cut(s) | 161, 168, 292 |
| FokI | GGATG | 1 cut(s) | 184 |
| HapII | CCGG | 1 cut(s) | 41 |
| Hin1II | CATG | 3 cut(s) | 165, 172, 296 |
| HinfI | GANTC | 3 cut(s) | 31, 127, 329 |
| HpaII | CCGG | 1 cut(s) | 41 |
| Hpy166II | GTNNAC | 2 cut(s) | 16, 322 |
| Hpy188I | TCNGA | 3 cut(s) | 72, 328, 354 |
| Hpy188III | TCNNGA | 4 cut(s) | 181, 260, 293, 445 |
| Hpy8I | GTNNAC | 2 cut(s) | 16, 322 |
| HpyAV | CCTTC | 1 cut(s) | 442 |
| HpyCH4III | ACNGT | 2 cut(s) | 83, 394 |
| HpyCH4V | TGCA | 6 cut(s) | 10, 16, 87, 116, 281, 322 |
| HpyF3I | CTNAG | 2 cut(s) | 125, 405 |
| Hsp92II | CATG | 3 cut(s) | 165, 172, 296 |
| Kzo9I | GATC | 1 cut(s) | 441 |
| LpnPI | CCDG | 4 cut(s) | 6, 54, 208, 398 |
| LweI | GCATC | 3 cut(s) | 125, 290, 324 |
| MalI | GATC | 1 cut(s) | 443 |
| MboI | GATC | 1 cut(s) | 441 |
| MboII | GAAGA | 7 cut(s) | 85, 186, 196, 197, 276, 451, 471 |
| MhlI | GDGCHC | 2 cut(s) | 18, 324 |
| MluCI | AATT | 1 cut(s) | 228 |
| MlyI | GAGTC | 1 cut(s) | 136 |
| MnlI | CCTC | 4 cut(s) | 69, 97, 211, 420 |
| MseI | TTAA | 1 cut(s) | 62 |
| MslI | CAYNNNNRTG | 1 cut(s) | 21 |
| MspI | CCGG | 1 cut(s) | 41 |
| MspR9I | CCNGG | 1 cut(s) | 41 |
| NciI | CCSGG | 1 cut(s) | 41 |
| NdeII | GATC | 1 cut(s) | 441 |
| NlaIII | CATG | 3 cut(s) | 165, 172, 296 |
| OliI | CACNNNNGTG | 1 cut(s) | 21 |
| PagI | TCATGA | 1 cut(s) | 292 |
| PfeI | GAWTC | 2 cut(s) | 31, 329 |
| PfoI | TCCNGGA | 1 cut(s) | 39 |
| PleI | GAGTC | 1 cut(s) | 135 |
| PpsI | GAGTC | 1 cut(s) | 135 |
| RseI | CAYNNNNRTG | 1 cut(s) | 21 |
| SaqAI | TTAA | 1 cut(s) | 62 |
| Sau3AI | GATC | 1 cut(s) | 441 |
| SchI | GAGTC | 1 cut(s) | 136 |
| ScrFI | CCNGG | 1 cut(s) | 41 |
| SduI | GDGCHC | 2 cut(s) | 18, 324 |
| SetI | ASST | 6 cut(s) | 218, 273, 406, 411, 431, 453 |
| SfaNI | GCATC | 3 cut(s) | 125, 290, 324 |
| SfcI | CTRYAG | 1 cut(s) | 220 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 21 |
| Sse9I | AATT | 1 cut(s) | 228 |
| SspI | AATATT | 1 cut(s) | 148 |
| StyD4I | CCNGG | 1 cut(s) | 39 |
| TaaI | ACNGT | 2 cut(s) | 83, 394 |
| TaqI | TCGA | 3 cut(s) | 119, 259, 332 |
| TasI | AATT | 1 cut(s) | 228 |
| TfiI | GAWTC | 2 cut(s) | 31, 329 |
| Tru1I | TTAA | 1 cut(s) | 62 |
| Tru9I | TTAA | 1 cut(s) | 62 |
| TspDTI | ATGAA | 1 cut(s) | 186 |
| TspGWI | ACGGA | 1 cut(s) | 405 |
| VneI | GTGCAC | 2 cut(s) | 14, 320 |
| XapI | RAATTY | 1 cut(s) | 228 |