Rroxscaffold_3G00226590

No description available

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Forward (+)
10200029 .. 10206468
6440 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_3G00226590.1

Sequence Viewer

Length: 186 bp
ATGTATGCTTGGTTAATGTATTTGACAATATATGTTAAAGTGTTAGCACTTGGAAGCAATGAAAGAAAGAGTGAGTTAGTTGTTTATTTAAAGTGTTGTTTTTGTAGCATTGCAGATTATAGCATAGAGAGAGAGCTTGAACAACAACTTCAATTTCAGCTATTACTTTGTAAGTTTGATGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

61

Amino Acids

7.22

Weight (kDa)

5.14

Isoelectric Point (pI)

40.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 140, 152
AluBI AGCT 2 cut(s) 136, 160
AluI AGCT 2 cut(s) 136, 160
BccI CCATC 1 cut(s) 173
Bse3DI GCAATG 2 cut(s) 64, 108
BseMI GCAATG 2 cut(s) 64, 108
BsrDI GCAATG 2 cut(s) 64, 108
CviJI RGCY 2 cut(s) 136, 160
CviKI_1 RGCY 2 cut(s) 136, 160
DraI TTTAAA 1 cut(s) 90
FaiI YATR 5 cut(s) 6, 31, 33, 120, 125
FspEI CC 2 cut(s) 36, 165
HpyCH4V TGCA 1 cut(s) 113
MluCI AATT 1 cut(s) 152
MseI TTAA 3 cut(s) 14, 36, 89
SaqAI TTAA 3 cut(s) 14, 36, 89
SetI ASST 2 cut(s) 138, 162
SgeI CNNG 3 cut(s) 21, 62, 149
Sse9I AATT 1 cut(s) 152
TasI AATT 1 cut(s) 152
Tru1I TTAA 3 cut(s) 14, 36, 89
Tru9I TTAA 3 cut(s) 14, 36, 89
TspDTI ATGAA 1 cut(s) 75
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.