Zinc finger matrin-type protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05760 AT3G05760 |
| fragaria_vesca | FvH4_6g07240 FvH4_6g07240 |
| malus_domestica | MD04G1195100.v1.1 MD12G1207200.v1.1 |
| prunus_persica | Prupe.6G314900_v2.0.a1 |
| pyrus_communis | pycom12g19500 |
| rosa_chinensis | RchiOBHm_Chr3g0456881 RchiOBHm_Chr7g0179971 |
| rosa_laevigata | RLG00000005306 RLG00000025272 |
| rosa_multiflora | Rmu_sc0019791.1_g000004 Rmu_sc0021305.1_g000001 Rmu_ssc0000119.1_g000009 |
| rosa_roxburghii | Rroxscaffold_3G00273270 Rroxscaffold_6G00422420 |
| rosa_rugosa | Rorug03G0016500 |
| rosa_samantha | Rh3AG076900 Rh3BG078700 Rh3CG078500 Rh7BG029200 Rh7CG030900 Rh7DG030200 |
| rosa_wichuraiana | Rw3G006600 Rw7G002400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 325 |
| AccI | GTMKAC | 2 cut(s) | 39, 195 |
| AccII | CGCG | 1 cut(s) | 93 |
| AciI | CCGC | 3 cut(s) | 91, 155, 325 |
| AclWI | GGATC | 1 cut(s) | 426 |
| AcuI | CTGAAG | 1 cut(s) | 386 |
| AfaI | GTAC | 1 cut(s) | 22 |
| AgsI | TTSAA | 3 cut(s) | 64, 175, 430 |
| AluBI | AGCT | 4 cut(s) | 125, 133, 299, 538 |
| AluI | AGCT | 4 cut(s) | 125, 133, 299, 538 |
| Alw21I | GWGCWC | 2 cut(s) | 127, 301 |
| Alw26I | GTCTC | 3 cut(s) | 97, 110, 492 |
| AlwI | GGATC | 1 cut(s) | 426 |
| AspLEI | GCGC | 2 cut(s) | 180, 462 |
| AspS9I | GGNCC | 3 cut(s) | 149, 183, 268 |
| AsuNHI | GCTAGC | 1 cut(s) | 11 |
| AvaII | GGWCC | 3 cut(s) | 149, 183, 268 |
| BanII | GRGCYC | 3 cut(s) | 91, 127, 301 |
| Bbv12I | GWGCWC | 2 cut(s) | 127, 301 |
| BccI | CCATC | 1 cut(s) | 377 |
| BcoDI | GTCTC | 3 cut(s) | 97, 110, 492 |
| BfaI | CTAG | 2 cut(s) | 12, 212 |
| BfoI | RGCGCY | 1 cut(s) | 463 |
| BglII | AGATCT | 1 cut(s) | 409 |
| Bme18I | GGWCC | 3 cut(s) | 149, 183, 268 |
| BmgT120I | GGNCC | 3 cut(s) | 149, 183, 268 |
| BmiI | GGNNCC | 1 cut(s) | 525 |
| BmtI | GCTAGC | 1 cut(s) | 15 |
| BpuEI | CTTGAG | 1 cut(s) | 434 |
| BsaJI | CCNNGG | 1 cut(s) | 527 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 380, 410 |
| BseDI | CCNNGG | 1 cut(s) | 527 |
| BseRI | GAGGAG | 7 cut(s) | 125, 128, 461, 464, 533, 536, 544 |
| Bsh1236I | CGCG | 1 cut(s) | 93 |
| BsiHKAI | GWGCWC | 2 cut(s) | 127, 301 |
| BsmAI | GTCTC | 3 cut(s) | 97, 110, 492 |
| BsmBI | CGTCTC | 2 cut(s) | 97, 110 |
| BsmI | GAATGC | 1 cut(s) | 240 |
| Bsp1286I | GDGCHC | 3 cut(s) | 91, 127, 301 |
| Bsp143I | GATC | 2 cut(s) | 409, 418 |
| BspACI | CCGC | 3 cut(s) | 91, 155, 325 |
| BspFNI | CGCG | 1 cut(s) | 93 |
| BspLI | GGNNCC | 1 cut(s) | 525 |
| BspOI | GCTAGC | 1 cut(s) | 15 |
| BspPI | GGATC | 1 cut(s) | 426 |
| BsrBI | CCGCTC | 1 cut(s) | 325 |
| BssECI | CCNNGG | 1 cut(s) | 527 |
| BssMI | GATC | 2 cut(s) | 409, 418 |
| BssNAI | GTATAC | 1 cut(s) | 196 |
| Bst1107I | GTATAC | 1 cut(s) | 196 |
| Bst4CI | ACNGT | 1 cut(s) | 25 |
| Bst6I | CTCTTC | 4 cut(s) | 66, 438, 488, 510 |
| BstC8I | GCNNGC | 5 cut(s) | 13, 87, 91, 95, 327 |
| BstFNI | CGCG | 1 cut(s) | 93 |
| BstH2I | RGCGCY | 1 cut(s) | 463 |
| BstHHI | GCGC | 2 cut(s) | 180, 462 |
| BstKTI | GATC | 2 cut(s) | 412, 421 |
| BstMAI | GTCTC | 3 cut(s) | 97, 110, 492 |
| BstMBI | GATC | 2 cut(s) | 409, 418 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 86, 166, 175 |
| BstNSI | RCATGY | 1 cut(s) | 310 |
| BstUI | CGCG | 1 cut(s) | 93 |
| BstX2I | RGATCY | 1 cut(s) | 409 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 278 |
| BstYI | RGATCY | 1 cut(s) | 409 |
| BstZ17I | GTATAC | 1 cut(s) | 196 |
| Cac8I | GCNNGC | 5 cut(s) | 13, 87, 91, 95, 327 |
| CfoI | GCGC | 2 cut(s) | 180, 462 |
| Cfr13I | GGNCC | 3 cut(s) | 149, 183, 268 |
| CseI | GACGC | 1 cut(s) | 86 |
| Csp6I | GTAC | 1 cut(s) | 21 |
| CviAII | CATG | 1 cut(s) | 307 |
| CviQI | GTAC | 1 cut(s) | 21 |
| DpnI | GATC | 2 cut(s) | 411, 420 |
| DpnII | GATC | 2 cut(s) | 409, 418 |
| Eam1104I | CTCTTC | 4 cut(s) | 66, 438, 488, 510 |
| EarI | CTCTTC | 4 cut(s) | 66, 438, 488, 510 |
| Ecl136II | GAGCTC | 2 cut(s) | 125, 299 |
| Eco24I | GRGCYC | 3 cut(s) | 91, 127, 301 |
| Eco47I | GGWCC | 3 cut(s) | 149, 183, 268 |
| Eco53kI | GAGCTC | 2 cut(s) | 125, 299 |
| Eco57I | CTGAAG | 1 cut(s) | 386 |
| EcoICRI | GAGCTC | 2 cut(s) | 125, 299 |
| EcoO109I | RGGNCCY | 2 cut(s) | 149, 183 |
| EcoT38I | GRGCYC | 3 cut(s) | 91, 127, 301 |
| Esp3I | CGTCTC | 2 cut(s) | 97, 110 |
| FaeI | CATG | 1 cut(s) | 310 |
| FaiI | YATR | 5 cut(s) | 51, 78, 196, 308, 314 |
| FatI | CATG | 1 cut(s) | 306 |
| FauI | CCCGC | 2 cut(s) | 98, 318 |
| FblI | GTMKAC | 2 cut(s) | 39, 195 |
| FriOI | GRGCYC | 3 cut(s) | 91, 127, 301 |
| FspBI | CTAG | 2 cut(s) | 12, 212 |
| GlaI | GCGC | 2 cut(s) | 179, 461 |
| HaeII | RGCGCY | 1 cut(s) | 463 |
| HgaI | GACGC | 1 cut(s) | 86 |
| HhaI | GCGC | 2 cut(s) | 180, 462 |
| Hin1II | CATG | 1 cut(s) | 310 |
| Hin6I | GCGC | 2 cut(s) | 178, 460 |
| HinP1I | GCGC | 2 cut(s) | 178, 460 |
| HincII | GTYRAC | 1 cut(s) | 399 |
| HindII | GTYRAC | 1 cut(s) | 399 |
| HindIII | AAGCTT | 1 cut(s) | 131 |
| HinfI | GANTC | 5 cut(s) | 60, 203, 251, 361, 466 |
| HpaI | GTTAAC | 1 cut(s) | 399 |
| Hpy166II | GTNNAC | 3 cut(s) | 40, 196, 399 |
| Hpy188I | TCNGA | 2 cut(s) | 102, 366 |
| Hpy188III | TCNNGA | 5 cut(s) | 68, 144, 335, 358, 413 |
| Hpy8I | GTNNAC | 3 cut(s) | 40, 196, 399 |
| HpyAV | CCTTC | 2 cut(s) | 48, 310 |
| HpyCH4III | ACNGT | 1 cut(s) | 25 |
| HpyCH4V | TGCA | 4 cut(s) | 160, 240, 257, 346 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 86, 166, 175 |
| Hsp92II | CATG | 1 cut(s) | 310 |
| HspAI | GCGC | 2 cut(s) | 178, 460 |
| KspAI | GTTAAC | 1 cut(s) | 399 |
| Kzo9I | GATC | 2 cut(s) | 409, 418 |
| LmnI | GCTCC | 2 cut(s) | 322, 523 |
| LpnPI | CCDG | 6 cut(s) | 53, 165, 166, 326, 422, 476 |
| MaeI | CTAG | 2 cut(s) | 12, 212 |
| MalI | GATC | 2 cut(s) | 411, 420 |
| MbiI | CCGCTC | 1 cut(s) | 325 |
| MboI | GATC | 2 cut(s) | 409, 418 |
| MboII | GAAGA | 7 cut(s) | 83, 379, 455, 499, 502, 505, 527 |
| MflI | RGATCY | 1 cut(s) | 409 |
| MhlI | GDGCHC | 3 cut(s) | 91, 127, 301 |
| MluCI | AATT | 1 cut(s) | 231 |
| MlyI | GAGTC | 1 cut(s) | 245 |
| MmeI | TCCRAC | 1 cut(s) | 13 |
| MseI | TTAA | 2 cut(s) | 398, 547 |
| MslI | CAYNNNNRTG | 2 cut(s) | 276, 311 |
| Mva1269I | GAATGC | 1 cut(s) | 240 |
| MvnI | CGCG | 1 cut(s) | 93 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 86, 166, 175 |
| NdeII | GATC | 2 cut(s) | 409, 418 |
| NheI | GCTAGC | 1 cut(s) | 11 |
| NlaIII | CATG | 1 cut(s) | 310 |
| NlaIV | GGNNCC | 1 cut(s) | 525 |
| NmeAIII | GCCGAG | 1 cut(s) | 187 |
| NspI | RCATGY | 1 cut(s) | 310 |
| PctI | GAATGC | 1 cut(s) | 240 |
| PfeI | GAWTC | 4 cut(s) | 60, 203, 361, 466 |
| PleI | GAGTC | 1 cut(s) | 245 |
| PpsI | GAGTC | 1 cut(s) | 245 |
| PpuMI | RGGWCCY | 2 cut(s) | 149, 183 |
| Psp124BI | GAGCTC | 2 cut(s) | 127, 301 |
| Psp5II | RGGWCCY | 2 cut(s) | 149, 183 |
| PspN4I | GGNNCC | 1 cut(s) | 525 |
| PspPI | GGNCC | 3 cut(s) | 149, 183, 268 |
| PspPPI | RGGWCCY | 2 cut(s) | 149, 183 |
| PsuI | RGATCY | 1 cut(s) | 409 |
| RsaI | GTAC | 1 cut(s) | 22 |
| RsaNI | GTAC | 1 cut(s) | 21 |
| RseI | CAYNNNNRTG | 2 cut(s) | 276, 311 |
| SacI | GAGCTC | 2 cut(s) | 127, 301 |
| SaqAI | TTAA | 2 cut(s) | 398, 547 |
| Sau3AI | GATC | 2 cut(s) | 409, 418 |
| Sau96I | GGNCC | 3 cut(s) | 149, 183, 268 |
| SchI | GAGTC | 1 cut(s) | 245 |
| SduI | GDGCHC | 3 cut(s) | 91, 127, 301 |
| SinI | GGWCC | 3 cut(s) | 149, 183, 268 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 276, 311 |
| SmlI | CTYRAG | 1 cut(s) | 413 |
| SmoI | CTYRAG | 1 cut(s) | 413 |
| Sse9I | AATT | 1 cut(s) | 231 |
| SsiI | CCGC | 3 cut(s) | 91, 155, 325 |
| SspI | AATATT | 1 cut(s) | 545 |
| SspMI | CTAG | 2 cut(s) | 12, 212 |
| SstI | GAGCTC | 2 cut(s) | 127, 301 |
| TaaI | ACNGT | 1 cut(s) | 25 |
| TaqI | TCGA | 5 cut(s) | 143, 201, 336, 357, 469 |
| TasI | AATT | 1 cut(s) | 231 |
| TatI | WGTACW | 1 cut(s) | 20 |
| TfiI | GAWTC | 4 cut(s) | 60, 203, 361, 466 |
| Tru1I | TTAA | 2 cut(s) | 398, 547 |
| Tru9I | TTAA | 2 cut(s) | 398, 547 |
| TspDTI | ATGAA | 1 cut(s) | 329 |
| VpaK11BI | GGWCC | 3 cut(s) | 149, 183, 268 |
| XceI | RCATGY | 1 cut(s) | 310 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 299 |
| XmiI | GTMKAC | 2 cut(s) | 39, 195 |
| XspI | CTAG | 2 cut(s) | 12, 212 |