Zinc finger matrin-type protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05760 AT3G05760 |
| fragaria_vesca | FvH4_6g07240 FvH4_6g07240 |
| malus_domestica | MD04G1195100.v1.1 MD12G1207200.v1.1 |
| prunus_persica | Prupe.6G314900_v2.0.a1 |
| pyrus_communis | pycom12g19500 |
| rosa_chinensis | RchiOBHm_Chr3g0456881 RchiOBHm_Chr7g0179971 |
| rosa_laevigata | RLG00000005306 RLG00000025272 |
| rosa_multiflora | Rmu_sc0019791.1_g000004 Rmu_sc0021305.1_g000001 Rmu_ssc0000119.1_g000009 |
| rosa_roxburghii | Rroxscaffold_3G00273270 Rroxscaffold_6G00422420 |
| rosa_rugosa | Rorug03G0016500 |
| rosa_samantha | Rh3AG076900 Rh3BG078700 Rh3CG078500 Rh7BG029200 Rh7CG030900 Rh7DG030200 |
| rosa_wichuraiana | Rw3G006600 Rw7G002400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 2 cut(s) | 304, 325 |
| AccI | GTMKAC | 3 cut(s) | 126, 290, 373 |
| AciI | CCGC | 4 cut(s) | 62, 86, 304, 325 |
| AgsI | TTSAA | 4 cut(s) | 46, 106, 334, 446 |
| AluBI | AGCT | 3 cut(s) | 173, 276, 419 |
| AluI | AGCT | 3 cut(s) | 173, 276, 419 |
| Alw21I | GWGCWC | 1 cut(s) | 206 |
| Alw26I | GTCTC | 1 cut(s) | 399 |
| ApeKI | GCWGC | 1 cut(s) | 337 |
| AseI | ATTAAT | 1 cut(s) | 428 |
| AspLEI | GCGC | 1 cut(s) | 366 |
| AspS9I | GGNCC | 3 cut(s) | 114, 247, 433 |
| AvaII | GGWCC | 3 cut(s) | 114, 247, 433 |
| AxyI | CCTNAGG | 1 cut(s) | 438 |
| Bbv12I | GWGCWC | 1 cut(s) | 206 |
| BbvI | GCAGC | 1 cut(s) | 349 |
| BccI | CCATC | 1 cut(s) | 448 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 65, 99 |
| BciVI | GTATCC | 1 cut(s) | 188 |
| BcoDI | GTCTC | 1 cut(s) | 399 |
| BfaI | CTAG | 1 cut(s) | 143 |
| BfoI | RGCGCY | 1 cut(s) | 367 |
| BfuI | GTATCC | 1 cut(s) | 188 |
| BisI | GCNGC | 1 cut(s) | 338 |
| BlsI | GCNGC | 1 cut(s) | 339 |
| Bme18I | GGWCC | 3 cut(s) | 114, 247, 433 |
| BmgT120I | GGNCC | 3 cut(s) | 114, 247, 433 |
| BmiI | GGNNCC | 1 cut(s) | 435 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 314, 344 |
| Bse21I | CCTNAGG | 1 cut(s) | 438 |
| BseGI | GGATG | 1 cut(s) | 476 |
| BseMII | CTCAG | 1 cut(s) | 429 |
| BseRI | GAGGAG | 2 cut(s) | 365, 368 |
| BseXI | GCAGC | 1 cut(s) | 349 |
| BsiHKAI | GWGCWC | 1 cut(s) | 206 |
| BsmAI | GTCTC | 1 cut(s) | 399 |
| Bsp1286I | GDGCHC | 1 cut(s) | 206 |
| BspACI | CCGC | 4 cut(s) | 62, 86, 304, 325 |
| BspCNI | CTCAG | 1 cut(s) | 430 |
| BspLI | GGNNCC | 1 cut(s) | 435 |
| BspQI | GCTCTTC | 1 cut(s) | 101 |
| BsrBI | CCGCTC | 2 cut(s) | 304, 325 |
| BssNAI | GTATAC | 1 cut(s) | 127 |
| Bst1107I | GTATAC | 1 cut(s) | 127 |
| Bst6I | CTCTTC | 3 cut(s) | 48, 101, 342 |
| BstC8I | GCNNGC | 7 cut(s) | 69, 73, 77, 185, 189, 306, 368 |
| BstDEI | CTNAG | 1 cut(s) | 438 |
| BstF5I | GGATG | 1 cut(s) | 476 |
| BstH2I | RGCGCY | 1 cut(s) | 367 |
| BstHHI | GCGC | 1 cut(s) | 366 |
| BstMAI | GTCTC | 1 cut(s) | 399 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 68, 97, 282 |
| BstNSI | RCATGY | 1 cut(s) | 289 |
| BstV1I | GCAGC | 1 cut(s) | 349 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 257 |
| BstZ17I | GTATAC | 1 cut(s) | 127 |
| Bsu36I | CCTNAGG | 1 cut(s) | 438 |
| BsuI | GTATCC | 1 cut(s) | 188 |
| BtsCI | GGATG | 1 cut(s) | 476 |
| Cac8I | GCNNGC | 7 cut(s) | 69, 73, 77, 185, 189, 306, 368 |
| CfoI | GCGC | 1 cut(s) | 366 |
| Cfr13I | GGNCC | 3 cut(s) | 114, 247, 433 |
| CseI | GACGC | 2 cut(s) | 68, 359 |
| CviAII | CATG | 3 cut(s) | 286, 394, 451 |
| CviJI | RGCY | 8 cut(s) | 71, 100, 142, 173, 183, 276, 419, 449 |
| CviKI_1 | RGCY | 8 cut(s) | 71, 100, 142, 173, 183, 276, 419, 449 |
| DdeI | CTNAG | 1 cut(s) | 438 |
| Eam1104I | CTCTTC | 3 cut(s) | 48, 101, 342 |
| EarI | CTCTTC | 3 cut(s) | 48, 101, 342 |
| Eco47I | GGWCC | 3 cut(s) | 114, 247, 433 |
| Eco81I | CCTNAGG | 1 cut(s) | 438 |
| EcoO109I | RGGNCCY | 1 cut(s) | 114 |
| FaeI | CATG | 3 cut(s) | 289, 397, 454 |
| FaiI | YATR | 5 cut(s) | 60, 127, 287, 395, 452 |
| FatI | CATG | 3 cut(s) | 285, 393, 450 |
| FauI | CCCGC | 2 cut(s) | 297, 318 |
| FblI | GTMKAC | 3 cut(s) | 126, 290, 373 |
| Fnu4HI | GCNGC | 1 cut(s) | 338 |
| FokI | GGATG | 1 cut(s) | 463 |
| Fsp4HI | GCNGC | 1 cut(s) | 338 |
| FspBI | CTAG | 1 cut(s) | 143 |
| GlaI | GCGC | 1 cut(s) | 365 |
| GluI | GCNGC | 1 cut(s) | 338 |
| HaeII | RGCGCY | 1 cut(s) | 367 |
| HgaI | GACGC | 2 cut(s) | 68, 359 |
| HhaI | GCGC | 1 cut(s) | 366 |
| Hin1II | CATG | 3 cut(s) | 289, 397, 454 |
| Hin6I | GCGC | 1 cut(s) | 364 |
| HinP1I | GCGC | 1 cut(s) | 364 |
| HincII | GTYRAC | 1 cut(s) | 374 |
| HindII | GTYRAC | 1 cut(s) | 374 |
| HinfI | GANTC | 5 cut(s) | 5, 42, 134, 230, 310 |
| Hpy166II | GTNNAC | 3 cut(s) | 127, 291, 374 |
| Hpy188I | TCNGA | 1 cut(s) | 208 |
| Hpy188III | TCNNGA | 2 cut(s) | 50, 314 |
| Hpy8I | GTNNAC | 3 cut(s) | 127, 291, 374 |
| Hpy99I | CGWCG | 1 cut(s) | 375 |
| HpyAV | CCTTC | 2 cut(s) | 30, 289 |
| HpyCH4V | TGCA | 3 cut(s) | 91, 219, 236 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 68, 97, 282 |
| HpyF3I | CTNAG | 1 cut(s) | 438 |
| Hsp92II | CATG | 3 cut(s) | 289, 397, 454 |
| HspAI | GCGC | 1 cut(s) | 364 |
| LguI | GCTCTTC | 1 cut(s) | 101 |
| LmnI | GCTCC | 4 cut(s) | 64, 178, 301, 322 |
| Lsp1109I | GCAGC | 1 cut(s) | 349 |
| MaeI | CTAG | 1 cut(s) | 143 |
| MbiI | CCGCTC | 2 cut(s) | 304, 325 |
| MboII | GAAGA | 4 cut(s) | 65, 118, 359, 465 |
| MhlI | GDGCHC | 1 cut(s) | 206 |
| MluCI | AATT | 1 cut(s) | 214 |
| MlyI | GAGTC | 3 cut(s) | 14, 224, 304 |
| MmeI | TCCRAC | 2 cut(s) | 4, 191 |
| MnlI | CCTC | 7 cut(s) | 140, 337, 343, 346, 351, 406, 433 |
| MseI | TTAA | 1 cut(s) | 428 |
| MslI | CAYNNNNRTG | 1 cut(s) | 255 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 68, 97, 282 |
| NlaIII | CATG | 3 cut(s) | 289, 397, 454 |
| NlaIV | GGNNCC | 1 cut(s) | 435 |
| NmeAIII | GCCGAG | 1 cut(s) | 118 |
| NspI | RCATGY | 1 cut(s) | 289 |
| PciSI | GCTCTTC | 1 cut(s) | 101 |
| PfeI | GAWTC | 2 cut(s) | 42, 134 |
| PkrI | GCNGC | 1 cut(s) | 339 |
| PleI | GAGTC | 3 cut(s) | 13, 224, 304 |
| PpsI | GAGTC | 3 cut(s) | 13, 224, 304 |
| PpuMI | RGGWCCY | 1 cut(s) | 114 |
| PshBI | ATTAAT | 1 cut(s) | 428 |
| Psp5II | RGGWCCY | 1 cut(s) | 114 |
| PspN4I | GGNNCC | 1 cut(s) | 435 |
| PspPI | GGNCC | 3 cut(s) | 114, 247, 433 |
| PspPPI | RGGWCCY | 1 cut(s) | 114 |
| RseI | CAYNNNNRTG | 1 cut(s) | 255 |
| SalI | GTCGAC | 1 cut(s) | 372 |
| SapI | GCTCTTC | 1 cut(s) | 101 |
| SaqAI | TTAA | 1 cut(s) | 428 |
| SatI | GCNGC | 1 cut(s) | 338 |
| Sau96I | GGNCC | 3 cut(s) | 114, 247, 433 |
| SchI | GAGTC | 3 cut(s) | 14, 224, 304 |
| SduI | GDGCHC | 1 cut(s) | 206 |
| SetI | ASST | 9 cut(s) | 119, 132, 159, 175, 278, 300, 421, 444, 488 |
| SinI | GGWCC | 3 cut(s) | 114, 247, 433 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 255 |
| Sse9I | AATT | 1 cut(s) | 214 |
| SsiI | CCGC | 4 cut(s) | 62, 86, 304, 325 |
| SspI | AATATT | 1 cut(s) | 426 |
| SspMI | CTAG | 1 cut(s) | 143 |
| TaqI | TCGA | 3 cut(s) | 132, 315, 373 |
| TasI | AATT | 1 cut(s) | 214 |
| TfiI | GAWTC | 2 cut(s) | 42, 134 |
| Tru1I | TTAA | 1 cut(s) | 428 |
| Tru9I | TTAA | 1 cut(s) | 428 |
| TseI | GCWGC | 1 cut(s) | 337 |
| TspDTI | ATGAA | 2 cut(s) | 410, 465 |
| VpaK11BI | GGWCC | 3 cut(s) | 114, 247, 433 |
| VspI | ATTAAT | 1 cut(s) | 428 |
| XceI | RCATGY | 1 cut(s) | 289 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 278 |
| XmiI | GTMKAC | 3 cut(s) | 126, 290, 373 |
| XspI | CTAG | 1 cut(s) | 143 |