Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0005819

Physical Location & Seq

Genomic Coordinates Forward (+)

67382121 .. 67387483

Gene Structure 5363 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00276120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGGCGCGAGGGTCGAAGCACAAAAAGGAAGAAGAAGACGAAGAAGATCCAGAGCGGAAGAGGCTGAAATCGCTGGGGTTTTCGAACAAGCTGGTGTCGGAGATCCCAGCCAGGCCTCAAGCGCCTCTCCGGCCTTCAAACGCCGTCGTTAAGCACCACGGCAAAGACATTATCAAGAAATCTCAGCGCAAGAACAGGTTCCTCTTCTCCTTCCCCGGCCTCTTTGCACCCATCGCTGGAGGTAAGATCGGCGACCTCAAGGATTTGGGCACCAAGACCCCTGTCCTCTACCTCGATTTCCCTCAGGGTCGGATCAAGTTGTTTGGGACCATTGTGTTCCCCAAGAACAAGTATTTGACTCTTCAGTTTCCTAGAGGTGGAAAGAGTGTCATGTGTGAGGACTACTTCGATAATATGATTGTATTTTCTGATGCTTGGTGGATTGGGACAAAGGACGAGAACCCAGACGAAACCCAACTTGATTTCCCTAAAGAACTGAATAAGGGACACAACACAGATTATGAATTTAAAGGTGGTGCAGGTTCAGCATCTGTGGTTAACAACCAAAGTGATTATAAAAATGAAATTACATATGTAGACGAACATTCTCCAGATGCTGAGCTTGAACATAATTTATCTGATGATGGAAACAAAGATTTGATTGAAGTAACACCAGTTCGTCATTCAGCAAGAACTGCTGGAAAACGATTCAATTTTGGAGAAGCTTCTTCTGGAGATGATTCTGTTGAAAGCAATACTGACTTATGTGAAGGAGAAGATAACCAAATTGGGGGACTCGATTCATTATCCAGGAAGCATGCTAGTGGAAATATCCTTTCTTCTATACAGACTGAAAATCTCAGCATTGGAGATTTCAACATTGTTAATGAGGATGCTGTGAAAGGAGCTCAAATTCCTGAACAAAATCAGGAGTCCTCTATGTCAGAGGCTAAATCAAAGAAACAATCTCATTCTACCTTTTCAGTGACTATACCTGAGGAGGACTCTTGTAGTAATCATGGTCCTCTCGTTCAGACTACTATATCTACCTTATTCAAGAAAGTGGAGAAGAAGGTAAGAAGAGTGGGAACTGTTGATGTACCAGTTTCTGGCCAGAAGTTGCTGCAAGCTCCTTCAAAGAGGAAGTTTAATCAGGATGGAAGACCTAGTAAAAAGGGCAAAAGTATCAAGGAAAACGATGCGGGCAGTGACGGCGACGGCGATGGCGACTTGAGGCTTGCCGGACGGAGGCCGGAGGCATCCCAGGTTTCTGGGCAGCGCTGTAACCACGTCGCCGGCGACTCCACCGACTGCAGACTGGTCCGTCCGGCAATCTCCGCCGCTCTGTCGTGCCCTGAGCCAAGCTGCAGCGTCGACGTCCGCATTTTAACGAAAGTGCGGACGTCCTCTTTGGAACACCTCCGTGTTGGGCAAAAGGTTGGCAAAGAAGAAAGAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0016043 GO:0021700 GO:0022402 GO:0022622 GO:0030154 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032989 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044786 GO:0046483 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048766 GO:0048856 GO:0048869 GO:0070013 GO:0071695 GO:0071704 GO:0071840 GO:0090304 GO:0090558 GO:0090627 GO:0097159 GO:0099402 GO:1901360 GO:1901363 GO:1901576 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

486

Amino Acids

53.44

Weight (kDa)

6.88

Isoelectric Point (pI)

45.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005819)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48380 AT1G48380
fragaria_vesca	FvH4_5g18410 FvH4_5g18410 FvH4_5g18410 FvH4_5g18410
malus_domestica	MD14G1245900.v1.1
prunus_persica	Prupe.2G315400_v2.0.a1 Prupe.4G244900_v2.0.a1 Prupe.5G243800_v2.0.a1 Prupe.5G243800_v2.0.a1 Prupe.5G243800_v2.0.a1 Prupe.5G243800_v2.0.a1
pyrus_communis	pycom14g20680
rosa_chinensis	RchiOBHm_Chr7g0177071
rosa_laevigata	RLG00000005559
rosa_multiflora	Rmu_sc0005310.1_g000026
rosa_roxburghii	Rroxscaffold_3G00276120
rosa_rugosa	Rorug06G0403300 Rorug06G0403400 Rorug06G0403400 Rorug06G0403500
rosa_samantha	Rh7AG002900 Rh7BG003200 Rh7BG003300 Rh7CG002500 Rh7DG003000
rosa_wichuraiana	Rw7G000240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	576
AasI	GACNNNNNNGTC	1 cut(s)	1323
AatII	GACGTC	2 cut(s)	1380, 1406
Acc36I	ACCTGC	1 cut(s)	530
AccB1I	GGYRCC	1 cut(s)	269
AccB7I	CCANNNNNTGG	1 cut(s)	1109
AccBSI	CCGCTC	2 cut(s)	55, 1343
AccI	GTMKAC	2 cut(s)	597, 1374
AccII	CGCG	1 cut(s)	7
AciI	CCGC	6 cut(s)	55, 1202, 1338, 1341, 1381, 1399
AclWI	GGATC	3 cut(s)	41, 97, 320
AcoI	YGGCCR	1 cut(s)	1111
AcsI	RAATTY	2 cut(s)	524, 912
AcuI	CTGAAG	1 cut(s)	347
AcyI	GRCGYC	2 cut(s)	1377, 1403
AfaI	GTAC	1 cut(s)	1101
AfeI	AGCGCT	1 cut(s)	1280
AfiI	CCNNNNNNNGG	5 cut(s)	236, 377, 790, 1109, 1248
AgsI	TTSAA	8 cut(s)	138, 626, 665, 712, 749, 877, 1057, 1137
AjiI	CACGTC	1 cut(s)	1291
AjnI	CCWGG	3 cut(s)	110, 809, 1263
AleI	CACNNNNGTG	1 cut(s)	1422
AluBI	AGCT	6 cut(s)	91, 622, 725, 908, 1130, 1365
AluI	AGCT	6 cut(s)	91, 622, 725, 908, 1130, 1365
Alw21I	GWGCWC	1 cut(s)	910
AlwI	GGATC	3 cut(s)	41, 97, 320
AlwNI	CAGNNNCTG	3 cut(s)	551, 617, 1109
Aor51HI	AGCGCT	1 cut(s)	1280
AoxI	GGCC	5 cut(s)	113, 131, 217, 1111, 1250
ApeKI	GCWGC	4 cut(s)	1123, 1276, 1365, 1368
ApoI	RAATTY	2 cut(s)	524, 912
ArsI	GACNNNNNNTTYG	2 cut(s)	1393, 1425
Asp700I	GAANNNNTTC	1 cut(s)	197
AspLEI	GCGC	4 cut(s)	7, 124, 189, 1281
AspS9I	GGNCC	3 cut(s)	327, 1022, 1321
AsuC2I	CCSGG	1 cut(s)	216
AsuII	TTCGAA	1 cut(s)	83
AvaII	GGWCC	3 cut(s)	327, 1022, 1321
AxyI	CCTNAGG	2 cut(s)	303, 996
BaeGI	GKGCMC	2 cut(s)	272, 1355
BalI	TGGCCA	1 cut(s)	1113
BanI	GGYRCC	1 cut(s)	269
BanII	GRGCYC	1 cut(s)	910
BbsI	GAAGAC	2 cut(s)	42, 1168
Bbv12I	GWGCWC	1 cut(s)	910
BbvI	GCAGC	4 cut(s)	1110, 1288, 1352, 1380
BccI	CCATC	4 cut(s)	239, 638, 1151, 1217
BceAI	ACGGC	4 cut(s)	128, 175, 1228, 1234
BciT130I	CCWGG	3 cut(s)	112, 811, 1265
BcnI	CCSGG	1 cut(s)	216
BfaI	CTAG	3 cut(s)	372, 822, 1167
BfmI	CTRYAG	2 cut(s)	1312, 1366
BfoI	RGCGCY	2 cut(s)	125, 1282
BfuAI	ACCTGC	1 cut(s)	530
BglI	GCCNNNNNGGC	1 cut(s)	130
BisI	GCNGC	5 cut(s)	1124, 1277, 1341, 1366, 1369
BlpI	GCTNAGC	1 cut(s)	618
BlsI	GCNGC	5 cut(s)	1125, 1278, 1342, 1367, 1370
Bme1390I	CCNGG	4 cut(s)	112, 216, 811, 1265
Bme18I	GGWCC	3 cut(s)	327, 1022, 1321
BmgBI	CACGTC	1 cut(s)	1291
BmgT120I	GGNCC	3 cut(s)	327, 1022, 1321
BmiI	GGNNCC	3 cut(s)	200, 271, 328
BmrFI	CCNGG	4 cut(s)	112, 216, 811, 1265
BmsI	GCATC	6 cut(s)	421, 557, 604, 883, 1189, 1268
BoxI	GACNNNNGTC	1 cut(s)	281
BpiI	GAAGAC	2 cut(s)	42, 1168
BplI	GAGNNNNNCTC	2 cut(s)	989, 1021
BpmI	CTGGAG	3 cut(s)	258, 594, 753
Bpu10I	CCTNAGC	1 cut(s)	1356
Bpu1102I	GCTNAGC	1 cut(s)	618
Bpu14I	TTCGAA	1 cut(s)	83
BpuEI	CTTGAG	3 cut(s)	102, 242, 1252
BpuMI	CCSGG	1 cut(s)	216
BsaHI	GRCGYC	2 cut(s)	1377, 1403
BsaJI	CCNNGG	3 cut(s)	157, 214, 1263
Bsc4I	CCNNNNNNNGG	5 cut(s)	236, 377, 790, 1109, 1248
Bse118I	RCCGGY	1 cut(s)	1295
Bse1I	ACTGG	3 cut(s)	674, 1103, 1323
Bse21I	CCTNAGG	2 cut(s)	303, 996
BseBI	CCWGG	3 cut(s)	112, 811, 1265
BseDI	CCNNGG	3 cut(s)	157, 214, 1263
BseGI	GGATG	3 cut(s)	898, 1162, 1259
BseLI	CCNNNNNNNGG	5 cut(s)	236, 377, 790, 1109, 1248
BseMII	CTCAG	6 cut(s)	197, 317, 609, 874, 987, 1347
BseNI	ACTGG	3 cut(s)	674, 1103, 1323
BseRI	GAGGAG	1 cut(s)	1013
BseSI	GKGCMC	2 cut(s)	272, 1355
BseXI	GCAGC	4 cut(s)	1110, 1288, 1352, 1380
BseYI	CCCAGC	2 cut(s)	73, 106
BsgI	GTGCAG	1 cut(s)	558
Bsh1236I	CGCG	1 cut(s)	7
BshFI	GGCC	5 cut(s)	115, 133, 219, 1113, 1252
BshNI	GGYRCC	1 cut(s)	269
BsiHKAI	GWGCWC	1 cut(s)	910
BsiSI	CCGG	6 cut(s)	130, 216, 1242, 1253, 1296, 1328
BslFI	GGGAC	4 cut(s)	340, 460, 519, 807
BslI	CCNNNNNNNGG	5 cut(s)	236, 377, 790, 1109, 1248
BsmFI	GGGAC	4 cut(s)	340, 460, 519, 807
BsnI	GGCC	5 cut(s)	115, 133, 219, 1113, 1252
Bsp119I	TTCGAA	1 cut(s)	83
Bsp1286I	GDGCHC	3 cut(s)	272, 910, 1355
Bsp143I	GATC	4 cut(s)	46, 102, 246, 312
Bsp1720I	GCTNAGC	1 cut(s)	618
BspACI	CCGC	6 cut(s)	55, 1202, 1338, 1341, 1381, 1399
BspANI	GGCC	5 cut(s)	115, 133, 219, 1113, 1252
BspCNI	CTCAG	6 cut(s)	196, 316, 610, 873, 988, 1348
BspFNI	CGCG	1 cut(s)	7
BspLI	GGNNCC	3 cut(s)	200, 271, 328
BspMAI	CTGCAG	2 cut(s)	1316, 1370
BspMI	ACCTGC	1 cut(s)	530
BspPI	GGATC	3 cut(s)	41, 97, 320
BspT104I	TTCGAA	1 cut(s)	83
BspT107I	GGYRCC	1 cut(s)	269
BsrBI	CCGCTC	2 cut(s)	55, 1343
BsrFI	RCCGGY	1 cut(s)	1295
BsrI	ACTGG	3 cut(s)	674, 1103, 1323
BssAI	RCCGGY	1 cut(s)	1295
BssECI	CCNNGG	3 cut(s)	157, 214, 1263
BssMI	GATC	4 cut(s)	46, 102, 246, 312
BssNI	GRCGYC	2 cut(s)	1377, 1403
Bst2UI	CCWGG	3 cut(s)	112, 811, 1265
Bst4CI	ACNGT	1 cut(s)	1093
Bst6I	CTCTTC	4 cut(s)	53, 209, 366, 1075
BstACI	GRCGYC	2 cut(s)	1377, 1403
BstAPI	GCANNNNNTGC	1 cut(s)	695
BstBI	TTCGAA	1 cut(s)	83
BstC8I	GCNNGC	5 cut(s)	819, 1128, 1204, 1239, 1297
BstDEI	CTNAG	6 cut(s)	183, 303, 618, 860, 996, 1356
BstDSI	CCRYGG	1 cut(s)	157
BstF5I	GGATG	3 cut(s)	898, 1162, 1259
BstFNI	CGCG	1 cut(s)	7
BstH2I	RGCGCY	2 cut(s)	125, 1282
BstHHI	GCGC	4 cut(s)	7, 124, 189, 1281
BstKTI	GATC	4 cut(s)	49, 105, 249, 315
BstMBI	GATC	4 cut(s)	46, 102, 246, 312
BstMWI	GCNNNNNNNGC	9 cut(s)	61, 70, 121, 130, 233, 545, 695, 1212, 1337
BstNI	CCWGG	3 cut(s)	112, 811, 1265
BstNSI	RCATGY	1 cut(s)	821
BstPAI	GACNNNNGTC	1 cut(s)	281
BstSCI	CCNGG	4 cut(s)	110, 214, 809, 1263
BstSFI	CTRYAG	2 cut(s)	1312, 1366
BstSLI	GKGCMC	2 cut(s)	272, 1355
BstUI	CGCG	1 cut(s)	7
BstV1I	GCAGC	4 cut(s)	1110, 1288, 1352, 1380
BstV2I	GAAGAC	2 cut(s)	42, 1168
BstX2I	RGATCY	2 cut(s)	46, 102
BstXI	CCANNNNNNTGG	1 cut(s)	1271
BstYI	RGATCY	2 cut(s)	46, 102
Bsu36I	CCTNAGG	2 cut(s)	303, 996
BsuRI	GGCC	5 cut(s)	115, 133, 219, 1113, 1252
BtgI	CCRYGG	1 cut(s)	157
BtgZI	GCGATG	2 cut(s)	217, 1236
BtrI	CACGTC	1 cut(s)	1291
BtsCI	GGATG	3 cut(s)	898, 1162, 1259
BtsI	GCAGTG	1 cut(s)	1213
BtsIMutI	CAGTG	2 cut(s)	990, 1213
BveI	ACCTGC	1 cut(s)	530
Cac8I	GCNNGC	5 cut(s)	819, 1128, 1204, 1239, 1297
CaiI	CAGNNNCTG	3 cut(s)	551, 617, 1109
CfoI	GCGC	4 cut(s)	7, 124, 189, 1281
Cfr10I	RCCGGY	1 cut(s)	1295
Cfr13I	GGNCC	3 cut(s)	327, 1022, 1321
CseI	GACGC	1 cut(s)	1360
Csp6I	GTAC	1 cut(s)	1100
CviAII	CATG	3 cut(s)	391, 818, 1019
CviQI	GTAC	1 cut(s)	1100
DdeI	CTNAG	6 cut(s)	183, 303, 618, 860, 996, 1356
DpnI	GATC	4 cut(s)	48, 104, 248, 314
DpnII	GATC	4 cut(s)	46, 102, 246, 312
DraI	TTTAAA	1 cut(s)	529
DrdI	GACNNNNNNGTC	1 cut(s)	1323
DseDI	GACNNNNNNGTC	1 cut(s)	1323
EaeI	YGGCCR	1 cut(s)	1111
Eam1104I	CTCTTC	4 cut(s)	53, 209, 366, 1075
EarI	CTCTTC	4 cut(s)	53, 209, 366, 1075
EciI	GGCGGA	1 cut(s)	1327
Ecl136II	GAGCTC	1 cut(s)	908
Eco147I	AGGCCT	1 cut(s)	115
Eco24I	GRGCYC	1 cut(s)	910
Eco47I	GGWCC	3 cut(s)	327, 1022, 1321
Eco47III	AGCGCT	1 cut(s)	1280
Eco53kI	GAGCTC	1 cut(s)	908
Eco57I	CTGAAG	1 cut(s)	347
Eco81I	CCTNAGG	2 cut(s)	303, 996
EcoICRI	GAGCTC	1 cut(s)	908
EcoRII	CCWGG	3 cut(s)	110, 809, 1263
EcoT38I	GRGCYC	1 cut(s)	910
FaeI	CATG	3 cut(s)	394, 821, 1022
FaqI	GGGAC	4 cut(s)	340, 460, 519, 807
FatI	CATG	3 cut(s)	390, 817, 1018
FauI	CCCGC	1 cut(s)	1195
FauNDI	CATATG	1 cut(s)	592
FblI	GTMKAC	2 cut(s)	597, 1374
Fnu4HI	GCNGC	5 cut(s)	1124, 1277, 1341, 1366, 1369
FokI	GGATG	3 cut(s)	905, 1169, 1246
FriOI	GRGCYC	1 cut(s)	910
Fsp4HI	GCNGC	5 cut(s)	1124, 1277, 1341, 1366, 1369
FspBI	CTAG	3 cut(s)	372, 822, 1167
GlaI	GCGC	4 cut(s)	6, 123, 188, 1280
GluI	GCNGC	5 cut(s)	1124, 1277, 1341, 1366, 1369
GsaI	CCCAGC	2 cut(s)	77, 110
GsuI	CTGGAG	3 cut(s)	258, 594, 753
HaeII	RGCGCY	2 cut(s)	125, 1282
HaeIII	GGCC	5 cut(s)	115, 133, 219, 1113, 1252
HapII	CCGG	6 cut(s)	130, 216, 1242, 1253, 1296, 1328
HgaI	GACGC	1 cut(s)	1360
HhaI	GCGC	4 cut(s)	7, 124, 189, 1281
Hin1I	GRCGYC	2 cut(s)	1377, 1403
Hin1II	CATG	3 cut(s)	394, 821, 1022
Hin6I	GCGC	4 cut(s)	5, 122, 187, 1279
HinP1I	GCGC	4 cut(s)	5, 122, 187, 1279
HincII	GTYRAC	2 cut(s)	559, 1375
HindII	GTYRAC	2 cut(s)	559, 1375
HindIII	AAGCTT	1 cut(s)	723
HinfI	GANTC	9 cut(s)	358, 708, 740, 795, 800, 932, 1004, 1301, 1455
HpaI	GTTAAC	1 cut(s)	559
HpaII	CCGG	6 cut(s)	130, 216, 1242, 1253, 1296, 1328
Hpy166II	GTNNAC	3 cut(s)	559, 598, 1375
Hpy188I	TCNGA	7 cut(s)	100, 312, 430, 640, 946, 1035, 1460
Hpy188III	TCNNGA	8 cut(s)	50, 175, 611, 732, 917, 929, 1057, 1154
Hpy8I	GTNNAC	3 cut(s)	559, 598, 1375
Hpy99I	CGWCG	5 cut(s)	149, 1220, 1295, 1376, 1379
HpyAV	CCTTC	5 cut(s)	144, 220, 764, 1066, 1143
HpyCH4III	ACNGT	1 cut(s)	1093
HpyCH4IV	ACGT	3 cut(s)	1290, 1377, 1403
HpyCH4V	TGCA	5 cut(s)	227, 539, 1126, 1314, 1368
HpyF10VI	GCNNNNNNNGC	9 cut(s)	61, 70, 121, 130, 233, 545, 695, 1212, 1337
HpyF3I	CTNAG	6 cut(s)	183, 303, 618, 860, 996, 1356
HpySE526I	ACGT	3 cut(s)	1290, 1377, 1403
Hsp92I	GRCGYC	2 cut(s)	1377, 1403
Hsp92II	CATG	3 cut(s)	394, 821, 1022
HspAI	GCGC	4 cut(s)	5, 122, 187, 1279
KroI	GCCGGC	1 cut(s)	1295
KroNI	GCCGGC	1 cut(s)	1297
KspAI	GTTAAC	1 cut(s)	559
Kzo9I	GATC	4 cut(s)	46, 102, 246, 312
LmnI	GCTCC	2 cut(s)	905, 1135
Lsp1109I	GCAGC	4 cut(s)	1110, 1288, 1352, 1380
LweI	GCATC	6 cut(s)	421, 557, 604, 883, 1189, 1268
MaeI	CTAG	3 cut(s)	372, 822, 1167
MaeII	ACGT	3 cut(s)	1290, 1377, 1403
MaeIII	GTNAC	4 cut(s)	667, 985, 1208, 1283
MalI	GATC	4 cut(s)	48, 104, 248, 314
MbiI	CCGCTC	2 cut(s)	55, 1343
MboI	GATC	4 cut(s)	46, 102, 246, 312
MflI	RGATCY	2 cut(s)	46, 102
MhlI	GDGCHC	3 cut(s)	272, 910, 1355
MlsI	TGGCCA	1 cut(s)	1113
MluCI	AATT	6 cut(s)	524, 585, 631, 712, 786, 912
MluNI	TGGCCA	1 cut(s)	1113
MlyI	GAGTC	5 cut(s)	352, 789, 941, 998, 1295
MmeI	TCCRAC	2 cut(s)	78, 290
Mox20I	TGGCCA	1 cut(s)	1113
MreI	CGCCGGCG	1 cut(s)	1295
MroNI	GCCGGC	1 cut(s)	1295
MroXI	GAANNNNTTC	1 cut(s)	197
MscI	TGGCCA	1 cut(s)	1113
MseI	TTAA	6 cut(s)	150, 528, 558, 885, 1149, 1388
MslI	CAYNNNNRTG	2 cut(s)	822, 1422
Msp20I	TGGCCA	1 cut(s)	1113
MspI	CCGG	6 cut(s)	130, 216, 1242, 1253, 1296, 1328
MspR9I	CCNGG	4 cut(s)	112, 216, 811, 1265
MvaI	CCWGG	3 cut(s)	112, 811, 1265
MvnI	CGCG	1 cut(s)	7
MwoI	GCNNNNNNNGC	9 cut(s)	61, 70, 121, 130, 233, 545, 695, 1212, 1337
NaeI	GCCGGC	1 cut(s)	1297
NciI	CCSGG	1 cut(s)	216
NdeI	CATATG	1 cut(s)	592
NdeII	GATC	4 cut(s)	46, 102, 246, 312
NgoMIV	GCCGGC	1 cut(s)	1295
NlaIII	CATG	3 cut(s)	394, 821, 1022
NlaIV	GGNNCC	3 cut(s)	200, 271, 328
NmuCI	GTSAC	2 cut(s)	985, 1208
NspI	RCATGY	1 cut(s)	821
NspV	TTCGAA	1 cut(s)	83
OliI	CACNNNNGTG	1 cut(s)	1422
PaeI	GCATGC	1 cut(s)	821
PceI	AGGCCT	1 cut(s)	115
PcsI	WCGNNNNNNNCGW	3 cut(s)	1218, 1224, 1296
PdiI	GCCGGC	1 cut(s)	1297
PdmI	GAANNNNTTC	1 cut(s)	197
PfeI	GAWTC	4 cut(s)	708, 740, 800, 1455
PflMI	CCANNNNNTGG	1 cut(s)	1109
PfoI	TCCNGGA	1 cut(s)	809
PkrI	GCNGC	5 cut(s)	1125, 1278, 1342, 1367, 1370
PleI	GAGTC	5 cut(s)	352, 789, 940, 998, 1295
PpsI	GAGTC	5 cut(s)	352, 789, 940, 998, 1295
PshAI	GACNNNNGTC	1 cut(s)	281
PsiI	TTATAA	1 cut(s)	576
Psp124BI	GAGCTC	1 cut(s)	910
Psp6I	CCWGG	3 cut(s)	110, 809, 1263
PspFI	CCCAGC	2 cut(s)	73, 106
PspGI	CCWGG	3 cut(s)	110, 809, 1263
PspN4I	GGNNCC	3 cut(s)	200, 271, 328
PspPI	GGNCC	3 cut(s)	327, 1022, 1321
PsrI	GAACNNNNNNTAC	2 cut(s)	660, 692
PstI	CTGCAG	2 cut(s)	1316, 1370
PstNI	CAGNNNCTG	3 cut(s)	551, 617, 1109
PsuI	RGATCY	2 cut(s)	46, 102
RsaI	GTAC	1 cut(s)	1101
RsaNI	GTAC	1 cut(s)	1100
RseI	CAYNNNNRTG	2 cut(s)	822, 1422
SacI	GAGCTC	1 cut(s)	910
SalI	GTCGAC	1 cut(s)	1373
SaqAI	TTAA	6 cut(s)	150, 528, 558, 885, 1149, 1388
SatI	GCNGC	5 cut(s)	1124, 1277, 1341, 1366, 1369
Sau3AI	GATC	4 cut(s)	46, 102, 246, 312
Sau96I	GGNCC	3 cut(s)	327, 1022, 1321
SchI	GAGTC	5 cut(s)	352, 789, 941, 998, 1295
ScrFI	CCNGG	4 cut(s)	112, 216, 811, 1265
SduI	GDGCHC	3 cut(s)	272, 910, 1355
SfaNI	GCATC	6 cut(s)	421, 557, 604, 883, 1189, 1268
SfcI	CTRYAG	2 cut(s)	1312, 1366
SfuI	TTCGAA	1 cut(s)	83
SgrAI	CRCCGGYG	1 cut(s)	1295
SgrDI	CGTCGACG	1 cut(s)	1373
SinI	GGWCC	3 cut(s)	327, 1022, 1321
SmiMI	CAYNNNNRTG	2 cut(s)	822, 1422
SmlI	CTYRAG	3 cut(s)	117, 257, 1231
SmoI	CTYRAG	3 cut(s)	117, 257, 1231
SphI	GCATGC	1 cut(s)	821
Sse9I	AATT	6 cut(s)	524, 585, 631, 712, 786, 912
SseBI	AGGCCT	1 cut(s)	115
SsiI	CCGC	6 cut(s)	55, 1202, 1338, 1341, 1381, 1399
SspMI	CTAG	3 cut(s)	372, 822, 1167
SstI	GAGCTC	1 cut(s)	910
StuI	AGGCCT	1 cut(s)	115
StyD4I	CCNGG	4 cut(s)	110, 214, 809, 1263
TaaI	ACNGT	1 cut(s)	1093
TaiI	ACGT	3 cut(s)	1293, 1380, 1406
TaqI	TCGA	6 cut(s)	14, 83, 294, 408, 798, 1374
TasI	AATT	6 cut(s)	524, 585, 631, 712, 786, 912
TauI	GCSGC	1 cut(s)	1343
TfiI	GAWTC	4 cut(s)	708, 740, 800, 1455
Tru1I	TTAA	6 cut(s)	150, 528, 558, 885, 1149, 1388
Tru9I	TTAA	6 cut(s)	150, 528, 558, 885, 1149, 1388
TscAI	CASTG	2 cut(s)	990, 1213
TseFI	GTSAC	2 cut(s)	985, 1208
TseI	GCWGC	4 cut(s)	1123, 1276, 1365, 1368
Tsp45I	GTSAC	2 cut(s)	985, 1208
TspDTI	ATGAA	3 cut(s)	537, 597, 792
TspGWI	ACGGA	3 cut(s)	1261, 1313, 1412
TspRI	CASTG	2 cut(s)	990, 1213
Van91I	CCANNNNNTGG	1 cut(s)	1109
VpaK11BI	GGWCC	3 cut(s)	327, 1022, 1321
XapI	RAATTY	2 cut(s)	524, 912
XceI	RCATGY	1 cut(s)	821
XmiI	GTMKAC	2 cut(s)	597, 1374
XmnI	GAANNNNTTC	1 cut(s)	197
XspI	CTAG	3 cut(s)	372, 822, 1167
ZraI	GACGTC	2 cut(s)	1378, 1404

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.