DNA-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G48380 AT1G48380 |
| fragaria_vesca | FvH4_5g18410 FvH4_5g18410 FvH4_5g18410 FvH4_5g18410 |
| malus_domestica | MD14G1245900.v1.1 |
| prunus_persica | Prupe.2G315400_v2.0.a1 Prupe.4G244900_v2.0.a1 Prupe.5G243800_v2.0.a1 Prupe.5G243800_v2.0.a1 Prupe.5G243800_v2.0.a1 Prupe.5G243800_v2.0.a1 |
| pyrus_communis | pycom14g20680 |
| rosa_chinensis | RchiOBHm_Chr7g0177071 |
| rosa_laevigata | RLG00000005559 |
| rosa_multiflora | Rmu_sc0005310.1_g000026 |
| rosa_roxburghii | Rroxscaffold_3G00276120 |
| rosa_rugosa | Rorug06G0403300 Rorug06G0403400 Rorug06G0403400 Rorug06G0403500 |
| rosa_samantha | Rh7AG002900 Rh7BG003200 Rh7BG003300 Rh7CG002500 Rh7DG003000 |
| rosa_wichuraiana | Rw7G000240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 576 |
| Acc36I | ACCTGC | 1 cut(s) | 530 |
| AccB1I | GGYRCC | 1 cut(s) | 269 |
| AccBSI | CCGCTC | 1 cut(s) | 55 |
| AccI | GTMKAC | 1 cut(s) | 597 |
| AccII | CGCG | 1 cut(s) | 7 |
| AciI | CCGC | 2 cut(s) | 55, 240 |
| AclWI | GGATC | 5 cut(s) | 41, 97, 320, 1074, 1087 |
| AcoI | YGGCCR | 1 cut(s) | 1168 |
| AcsI | RAATTY | 3 cut(s) | 524, 909, 1316 |
| AcuI | CTGAAG | 2 cut(s) | 347, 870 |
| AfaI | GTAC | 1 cut(s) | 1101 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 236, 377, 790 |
| AjnI | CCWGG | 2 cut(s) | 110, 809 |
| AluBI | AGCT | 5 cut(s) | 622, 725, 905, 1187, 1329 |
| AluI | AGCT | 5 cut(s) | 622, 725, 905, 1187, 1329 |
| Alw21I | GWGCWC | 1 cut(s) | 907 |
| AlwI | GGATC | 5 cut(s) | 41, 97, 320, 1074, 1087 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 551 |
| AoxI | GGCC | 4 cut(s) | 113, 131, 217, 1168 |
| ApeKI | GCWGC | 2 cut(s) | 1180, 1364 |
| ApoI | RAATTY | 3 cut(s) | 524, 909, 1316 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 197 |
| AspLEI | GCGC | 3 cut(s) | 7, 124, 189 |
| AspS9I | GGNCC | 2 cut(s) | 327, 1019 |
| AsuC2I | CCSGG | 1 cut(s) | 216 |
| AsuII | TTCGAA | 1 cut(s) | 83 |
| AvaII | GGWCC | 2 cut(s) | 327, 1019 |
| AxyI | CCTNAGG | 2 cut(s) | 303, 993 |
| BaeGI | GKGCMC | 1 cut(s) | 272 |
| BalI | TGGCCA | 1 cut(s) | 1170 |
| BamHI | GGATCC | 1 cut(s) | 1079 |
| BanI | GGYRCC | 1 cut(s) | 269 |
| BanII | GRGCYC | 1 cut(s) | 907 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1274, 1306 |
| BbsI | GAAGAC | 2 cut(s) | 42, 1225 |
| Bbv12I | GWGCWC | 1 cut(s) | 907 |
| BbvI | GCAGC | 2 cut(s) | 1167, 1351 |
| BccI | CCATC | 3 cut(s) | 239, 638, 1208 |
| BceAI | ACGGC | 2 cut(s) | 128, 175 |
| BciT130I | CCWGG | 2 cut(s) | 112, 811 |
| BciVI | GTATCC | 1 cut(s) | 1330 |
| BcnI | CCSGG | 1 cut(s) | 216 |
| BfaI | CTAG | 3 cut(s) | 372, 822, 1224 |
| BfoI | RGCGCY | 1 cut(s) | 125 |
| BfuAI | ACCTGC | 1 cut(s) | 530 |
| BfuI | GTATCC | 1 cut(s) | 1330 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 130 |
| BglII | AGATCT | 1 cut(s) | 853 |
| BisI | GCNGC | 2 cut(s) | 1181, 1365 |
| BlpI | GCTNAGC | 1 cut(s) | 618 |
| BlsI | GCNGC | 2 cut(s) | 1182, 1366 |
| Bme1390I | CCNGG | 3 cut(s) | 112, 216, 811 |
| Bme18I | GGWCC | 2 cut(s) | 327, 1019 |
| BmgT120I | GGNCC | 2 cut(s) | 327, 1019 |
| BmiI | GGNNCC | 4 cut(s) | 200, 271, 328, 1081 |
| BmrFI | CCNGG | 3 cut(s) | 112, 216, 811 |
| BmsI | GCATC | 6 cut(s) | 421, 557, 604, 880, 1160, 1246 |
| BpiI | GAAGAC | 2 cut(s) | 42, 1225 |
| BpmI | CTGGAG | 2 cut(s) | 594, 753 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 618 |
| Bpu14I | TTCGAA | 1 cut(s) | 83 |
| BpuEI | CTTGAG | 3 cut(s) | 102, 242, 1306 |
| BpuMI | CCSGG | 1 cut(s) | 216 |
| BsaJI | CCNNGG | 3 cut(s) | 157, 214, 1139 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 236, 377, 790 |
| Bse1I | ACTGG | 2 cut(s) | 674, 1083 |
| Bse21I | CCTNAGG | 2 cut(s) | 303, 993 |
| BseBI | CCWGG | 2 cut(s) | 112, 811 |
| BseDI | CCNNGG | 3 cut(s) | 157, 214, 1139 |
| BseGI | GGATG | 2 cut(s) | 895, 1219 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 236, 377, 790 |
| BseMII | CTCAG | 4 cut(s) | 197, 317, 871, 1127 |
| BseNI | ACTGG | 2 cut(s) | 674, 1083 |
| BseRI | GAGGAG | 1 cut(s) | 275 |
| BseSI | GKGCMC | 1 cut(s) | 272 |
| BseXI | GCAGC | 2 cut(s) | 1167, 1351 |
| BseYI | CCCAGC | 2 cut(s) | 73, 106 |
| BsgI | GTGCAG | 1 cut(s) | 558 |
| Bsh1236I | CGCG | 1 cut(s) | 7 |
| BshFI | GGCC | 4 cut(s) | 115, 133, 219, 1170 |
| BshNI | GGYRCC | 1 cut(s) | 269 |
| BsiHKAI | GWGCWC | 1 cut(s) | 907 |
| BsiSI | CCGG | 2 cut(s) | 130, 216 |
| BslFI | GGGAC | 4 cut(s) | 340, 460, 519, 807 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 236, 377, 790 |
| BsmFI | GGGAC | 4 cut(s) | 340, 460, 519, 807 |
| BsnI | GGCC | 4 cut(s) | 115, 133, 219, 1170 |
| Bsp119I | TTCGAA | 1 cut(s) | 83 |
| Bsp1286I | GDGCHC | 2 cut(s) | 272, 907 |
| Bsp143I | GATC | 6 cut(s) | 46, 102, 246, 312, 853, 1079 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 618 |
| BspACI | CCGC | 2 cut(s) | 55, 240 |
| BspANI | GGCC | 4 cut(s) | 115, 133, 219, 1170 |
| BspCNI | CTCAG | 4 cut(s) | 196, 316, 870, 1126 |
| BspFNI | CGCG | 1 cut(s) | 7 |
| BspLI | GGNNCC | 4 cut(s) | 200, 271, 328, 1081 |
| BspMI | ACCTGC | 1 cut(s) | 530 |
| BspPI | GGATC | 5 cut(s) | 41, 97, 320, 1074, 1087 |
| BspT104I | TTCGAA | 1 cut(s) | 83 |
| BspT107I | GGYRCC | 1 cut(s) | 269 |
| BsrBI | CCGCTC | 1 cut(s) | 55 |
| BsrI | ACTGG | 2 cut(s) | 674, 1083 |
| BssECI | CCNNGG | 3 cut(s) | 157, 214, 1139 |
| BssMI | GATC | 6 cut(s) | 46, 102, 246, 312, 853, 1079 |
| BssT1I | CCWWGG | 1 cut(s) | 1139 |
| Bst2UI | CCWGG | 2 cut(s) | 112, 811 |
| Bst6I | CTCTTC | 4 cut(s) | 53, 209, 366, 450 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 695 |
| BstBI | TTCGAA | 1 cut(s) | 83 |
| BstC8I | GCNNGC | 3 cut(s) | 238, 819, 1185 |
| BstDEI | CTNAG | 6 cut(s) | 183, 303, 618, 857, 993, 1113 |
| BstDSI | CCRYGG | 1 cut(s) | 157 |
| BstF5I | GGATG | 2 cut(s) | 895, 1219 |
| BstFNI | CGCG | 1 cut(s) | 7 |
| BstH2I | RGCGCY | 1 cut(s) | 125 |
| BstHHI | GCGC | 3 cut(s) | 7, 124, 189 |
| BstKTI | GATC | 6 cut(s) | 49, 105, 249, 315, 856, 1082 |
| BstMBI | GATC | 6 cut(s) | 46, 102, 246, 312, 853, 1079 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 61, 70, 121, 130, 233, 545, 695 |
| BstNI | CCWGG | 2 cut(s) | 112, 811 |
| BstNSI | RCATGY | 1 cut(s) | 821 |
| BstSCI | CCNGG | 3 cut(s) | 110, 214, 809 |
| BstSLI | GKGCMC | 1 cut(s) | 272 |
| BstUI | CGCG | 1 cut(s) | 7 |
| BstV1I | GCAGC | 2 cut(s) | 1167, 1351 |
| BstV2I | GAAGAC | 2 cut(s) | 42, 1225 |
| BstX2I | RGATCY | 4 cut(s) | 46, 102, 853, 1079 |
| BstYI | RGATCY | 4 cut(s) | 46, 102, 853, 1079 |
| Bsu36I | CCTNAGG | 2 cut(s) | 303, 993 |
| BsuI | GTATCC | 1 cut(s) | 1330 |
| BsuRI | GGCC | 4 cut(s) | 115, 133, 219, 1170 |
| BtgI | CCRYGG | 1 cut(s) | 157 |
| BtgZI | GCGATG | 1 cut(s) | 217 |
| BtsCI | GGATG | 2 cut(s) | 895, 1219 |
| BtsIMutI | CAGTG | 1 cut(s) | 987 |
| BveI | ACCTGC | 1 cut(s) | 530 |
| Cac8I | GCNNGC | 3 cut(s) | 238, 819, 1185 |
| CaiI | CAGNNNCTG | 1 cut(s) | 551 |
| CfoI | GCGC | 3 cut(s) | 7, 124, 189 |
| Cfr13I | GGNCC | 2 cut(s) | 327, 1019 |
| Csp6I | GTAC | 1 cut(s) | 1100 |
| CviAII | CATG | 3 cut(s) | 391, 818, 1016 |
| CviQI | GTAC | 1 cut(s) | 1100 |
| DdeI | CTNAG | 6 cut(s) | 183, 303, 618, 857, 993, 1113 |
| DpnI | GATC | 6 cut(s) | 48, 104, 248, 314, 855, 1081 |
| DpnII | GATC | 6 cut(s) | 46, 102, 246, 312, 853, 1079 |
| DraI | TTTAAA | 1 cut(s) | 529 |
| EaeI | YGGCCR | 1 cut(s) | 1168 |
| Eam1104I | CTCTTC | 4 cut(s) | 53, 209, 366, 450 |
| EarI | CTCTTC | 4 cut(s) | 53, 209, 366, 450 |
| Ecl136II | GAGCTC | 1 cut(s) | 905 |
| Eco130I | CCWWGG | 1 cut(s) | 1139 |
| Eco147I | AGGCCT | 1 cut(s) | 115 |
| Eco24I | GRGCYC | 1 cut(s) | 907 |
| Eco47I | GGWCC | 2 cut(s) | 327, 1019 |
| Eco53kI | GAGCTC | 1 cut(s) | 905 |
| Eco57I | CTGAAG | 2 cut(s) | 347, 870 |
| Eco81I | CCTNAGG | 2 cut(s) | 303, 993 |
| EcoICRI | GAGCTC | 1 cut(s) | 905 |
| EcoRI | GAATTC | 1 cut(s) | 1316 |
| EcoRII | CCWGG | 2 cut(s) | 110, 809 |
| EcoT14I | CCWWGG | 1 cut(s) | 1139 |
| EcoT38I | GRGCYC | 1 cut(s) | 907 |
| ErhI | CCWWGG | 1 cut(s) | 1139 |
| FaeI | CATG | 3 cut(s) | 394, 821, 1019 |
| FaqI | GGGAC | 4 cut(s) | 340, 460, 519, 807 |
| FatI | CATG | 3 cut(s) | 390, 817, 1015 |
| FauNDI | CATATG | 1 cut(s) | 592 |
| FblI | GTMKAC | 1 cut(s) | 597 |
| Fnu4HI | GCNGC | 2 cut(s) | 1181, 1365 |
| FokI | GGATG | 2 cut(s) | 902, 1226 |
| FriOI | GRGCYC | 1 cut(s) | 907 |
| Fsp4HI | GCNGC | 2 cut(s) | 1181, 1365 |
| FspBI | CTAG | 3 cut(s) | 372, 822, 1224 |
| GlaI | GCGC | 3 cut(s) | 6, 123, 188 |
| GluI | GCNGC | 2 cut(s) | 1181, 1365 |
| GsaI | CCCAGC | 2 cut(s) | 77, 110 |
| GsuI | CTGGAG | 2 cut(s) | 594, 753 |
| HaeII | RGCGCY | 1 cut(s) | 125 |
| HaeIII | GGCC | 4 cut(s) | 115, 133, 219, 1170 |
| HapII | CCGG | 2 cut(s) | 130, 216 |
| HhaI | GCGC | 3 cut(s) | 7, 124, 189 |
| Hin1II | CATG | 3 cut(s) | 394, 821, 1019 |
| Hin6I | GCGC | 3 cut(s) | 5, 122, 187 |
| HinP1I | GCGC | 3 cut(s) | 5, 122, 187 |
| HincII | GTYRAC | 1 cut(s) | 559 |
| HindII | GTYRAC | 1 cut(s) | 559 |
| HindIII | AAGCTT | 2 cut(s) | 620, 723 |
| HinfI | GANTC | 7 cut(s) | 358, 708, 740, 795, 929, 1001, 1093 |
| HpaI | GTTAAC | 1 cut(s) | 559 |
| HpaII | CCGG | 2 cut(s) | 130, 216 |
| Hpy166II | GTNNAC | 2 cut(s) | 559, 598 |
| Hpy188I | TCNGA | 6 cut(s) | 100, 312, 430, 640, 943, 1032 |
| Hpy188III | TCNNGA | 8 cut(s) | 50, 175, 611, 732, 914, 926, 1054, 1211 |
| Hpy8I | GTNNAC | 2 cut(s) | 559, 598 |
| Hpy99I | CGWCG | 1 cut(s) | 149 |
| HpyAV | CCTTC | 5 cut(s) | 144, 220, 764, 1119, 1200 |
| HpyCH4V | TGCA | 2 cut(s) | 539, 1183 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 61, 70, 121, 130, 233, 545, 695 |
| HpyF3I | CTNAG | 6 cut(s) | 183, 303, 618, 857, 993, 1113 |
| Hsp92II | CATG | 3 cut(s) | 394, 821, 1019 |
| HspAI | GCGC | 3 cut(s) | 5, 122, 187 |
| KspAI | GTTAAC | 1 cut(s) | 559 |
| Kzo9I | GATC | 6 cut(s) | 46, 102, 246, 312, 853, 1079 |
| LmnI | GCTCC | 3 cut(s) | 232, 902, 1192 |
| Lsp1109I | GCAGC | 2 cut(s) | 1167, 1351 |
| LweI | GCATC | 6 cut(s) | 421, 557, 604, 880, 1160, 1246 |
| MaeI | CTAG | 3 cut(s) | 372, 822, 1224 |
| MaeIII | GTNAC | 2 cut(s) | 667, 982 |
| MalI | GATC | 6 cut(s) | 48, 104, 248, 314, 855, 1081 |
| MbiI | CCGCTC | 1 cut(s) | 55 |
| MboI | GATC | 6 cut(s) | 46, 102, 246, 312, 853, 1079 |
| MflI | RGATCY | 4 cut(s) | 46, 102, 853, 1079 |
| MhlI | GDGCHC | 2 cut(s) | 272, 907 |
| MlsI | TGGCCA | 1 cut(s) | 1170 |
| MluCI | AATT | 8 cut(s) | 524, 585, 631, 712, 786, 799, 909, 1316 |
| MluNI | TGGCCA | 1 cut(s) | 1170 |
| MlyI | GAGTC | 5 cut(s) | 352, 789, 938, 995, 1102 |
| MmeI | TCCRAC | 1 cut(s) | 290 |
| Mox20I | TGGCCA | 1 cut(s) | 1170 |
| MroXI | GAANNNNTTC | 1 cut(s) | 197 |
| MscI | TGGCCA | 1 cut(s) | 1170 |
| MseI | TTAA | 5 cut(s) | 150, 528, 558, 882, 1206 |
| MslI | CAYNNNNRTG | 1 cut(s) | 822 |
| Msp20I | TGGCCA | 1 cut(s) | 1170 |
| MspI | CCGG | 2 cut(s) | 130, 216 |
| MspR9I | CCNGG | 3 cut(s) | 112, 216, 811 |
| MvaI | CCWGG | 2 cut(s) | 112, 811 |
| MvnI | CGCG | 1 cut(s) | 7 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 61, 70, 121, 130, 233, 545, 695 |
| NciI | CCSGG | 1 cut(s) | 216 |
| NdeI | CATATG | 1 cut(s) | 592 |
| NdeII | GATC | 6 cut(s) | 46, 102, 246, 312, 853, 1079 |
| NlaIII | CATG | 3 cut(s) | 394, 821, 1019 |
| NlaIV | GGNNCC | 4 cut(s) | 200, 271, 328, 1081 |
| NmeAIII | GCCGAG | 1 cut(s) | 1116 |
| NmuCI | GTSAC | 1 cut(s) | 982 |
| NspI | RCATGY | 1 cut(s) | 821 |
| NspV | TTCGAA | 1 cut(s) | 83 |
| PaeI | GCATGC | 1 cut(s) | 821 |
| PceI | AGGCCT | 1 cut(s) | 115 |
| PdmI | GAANNNNTTC | 1 cut(s) | 197 |
| PfeI | GAWTC | 2 cut(s) | 708, 740 |
| PfoI | TCCNGGA | 1 cut(s) | 809 |
| PkrI | GCNGC | 2 cut(s) | 1182, 1366 |
| PleI | GAGTC | 5 cut(s) | 352, 789, 937, 995, 1101 |
| PpsI | GAGTC | 5 cut(s) | 352, 789, 937, 995, 1101 |
| PsiI | TTATAA | 1 cut(s) | 576 |
| Psp124BI | GAGCTC | 1 cut(s) | 907 |
| Psp6I | CCWGG | 2 cut(s) | 110, 809 |
| PspFI | CCCAGC | 2 cut(s) | 73, 106 |
| PspGI | CCWGG | 2 cut(s) | 110, 809 |
| PspN4I | GGNNCC | 4 cut(s) | 200, 271, 328, 1081 |
| PspPI | GGNCC | 2 cut(s) | 327, 1019 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 660, 692 |
| PstNI | CAGNNNCTG | 1 cut(s) | 551 |
| PsuI | RGATCY | 4 cut(s) | 46, 102, 853, 1079 |
| RsaI | GTAC | 1 cut(s) | 1101 |
| RsaNI | GTAC | 1 cut(s) | 1100 |
| RseI | CAYNNNNRTG | 1 cut(s) | 822 |
| SacI | GAGCTC | 1 cut(s) | 907 |
| SaqAI | TTAA | 5 cut(s) | 150, 528, 558, 882, 1206 |
| SatI | GCNGC | 2 cut(s) | 1181, 1365 |
| Sau3AI | GATC | 6 cut(s) | 46, 102, 246, 312, 853, 1079 |
| Sau96I | GGNCC | 2 cut(s) | 327, 1019 |
| SchI | GAGTC | 5 cut(s) | 352, 789, 938, 995, 1102 |
| ScrFI | CCNGG | 3 cut(s) | 112, 216, 811 |
| SduI | GDGCHC | 2 cut(s) | 272, 907 |
| SfaNI | GCATC | 6 cut(s) | 421, 557, 604, 880, 1160, 1246 |
| SfuI | TTCGAA | 1 cut(s) | 83 |
| SinI | GGWCC | 2 cut(s) | 327, 1019 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 822 |
| SmlI | CTYRAG | 3 cut(s) | 117, 257, 1321 |
| SmoI | CTYRAG | 3 cut(s) | 117, 257, 1321 |
| SphI | GCATGC | 1 cut(s) | 821 |
| Sse9I | AATT | 8 cut(s) | 524, 585, 631, 712, 786, 799, 909, 1316 |
| SseBI | AGGCCT | 1 cut(s) | 115 |
| SsiI | CCGC | 2 cut(s) | 55, 240 |
| SspMI | CTAG | 3 cut(s) | 372, 822, 1224 |
| SstI | GAGCTC | 1 cut(s) | 907 |
| StuI | AGGCCT | 1 cut(s) | 115 |
| StyD4I | CCNGG | 3 cut(s) | 110, 214, 809 |
| StyI | CCWWGG | 1 cut(s) | 1139 |
| TaqI | TCGA | 4 cut(s) | 14, 83, 294, 408 |
| TasI | AATT | 8 cut(s) | 524, 585, 631, 712, 786, 799, 909, 1316 |
| TatI | WGTACW | 1 cut(s) | 1099 |
| TfiI | GAWTC | 2 cut(s) | 708, 740 |
| Tru1I | TTAA | 5 cut(s) | 150, 528, 558, 882, 1206 |
| Tru9I | TTAA | 5 cut(s) | 150, 528, 558, 882, 1206 |
| TscAI | CASTG | 1 cut(s) | 987 |
| TseFI | GTSAC | 1 cut(s) | 982 |
| TseI | GCWGC | 2 cut(s) | 1180, 1364 |
| Tsp45I | GTSAC | 1 cut(s) | 982 |
| TspDTI | ATGAA | 4 cut(s) | 537, 597, 792, 1368 |
| TspRI | CASTG | 1 cut(s) | 987 |
| VpaK11BI | GGWCC | 2 cut(s) | 327, 1019 |
| XapI | RAATTY | 3 cut(s) | 524, 909, 1316 |
| XceI | RCATGY | 1 cut(s) | 821 |
| XmiI | GTMKAC | 1 cut(s) | 597 |
| XmnI | GAANNNNTTC | 1 cut(s) | 197 |
| XspI | CTAG | 3 cut(s) | 372, 822, 1224 |