Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0010715

Physical Location & Seq

Genomic Coordinates Reverse (-)

64832529 .. 64835369

Gene Structure 2841 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00331050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1266 bp

ATGCATTCTTCATCTCAAATCCATTTTCTGTCACTATTCCTCCTCATCATTGTACCTTCATATTTTTCCTTCCCTCTTGGCCATAACCCAGAGGAGCCACCTGTACTTGATCATCATCAAAAAACCTATACTGGTCATAATTTTTTGAGACCCTACCCTACAATATTAAGGACAAGCAGGAGGGAGCTTATTACAGCCAGTGCTTCATCCAAGGTTGTTTTTAATGTGCATGATTTTGGAGCTCAAGCAAATGGAGGAGATGATACCAAGGCATTTAGGAACGCATGGAAGAAGGCATGCTCAAATTCTGAAGGAGTAACTGTTGAGCTCGTGGTCCCTAAGAACAGAAACTATCACATCAAACCAATTACATTCTCTGGTCCTTGCAAATCTCAGGTCACCTTTAAGAACTTTAAAGTTGAAGGTGCTGGCACTGGCATCATCGATGGCAATGGAAGGAAATGGTGGGAGAATTCTTGCAAAGTTAACGAGTCCCTTCCTTGCACGAGCGCACCAACTGCTGTGACTTTCTATCAGTGCAATAATTTGGAGGTAGCAAATCTGAGGTTCCTGAATGCACAGAGAATGCATCTGACGTTTCAGAAATGTGCGCTTGTAAAAGCTTTGAATCTCATAATAACAGCACCAGGGAACAGTCCCAACACCGATGGAATCCATGTCACTGAAACACAAGATATTCGCATAAACAGCTGCCGCATTAGGACAGGTGACGACTGCATTTCGATAGTAAGTGGGTCAAGCAATGTTCAAGCTAGCGATATAACCTGCGGACCAGGTCATGGAATCAGTATTGGAAGCTTAGGAGCTGAAAATTCAGAAGCTCAGGTTTCCGATGTGGTAGTAAGTAGAGCGAAGCTTATAGGCACCACTAATGGATTAAGAATCAAGACTTGGCAAGGAGGTTCTGGTTATGCAAAAAACATCACATTCGAAAATGTTCAAATGCAGAATGTCACCAATCCCATAATCATAGACCAACATTACTGTGATCAGGAAAAACCATGCCAAGATCAGGCTTCAGCTGTAAAAGTAAGCGGAGTGGTATACCAAAATGTGAAAGGCACAAGTGCTTCTAAAGTGGCGGTAAATTTCGATTGCAGTGAGCGCTTCGGATGTCAAGAGATTTTGGTGCAAGACGTGAACCTAGTACCTGTAAACGATGAAGGAATTACGACAGCTTCTTGTCAGAATGTTGGATTACGCCCTAGAGGGATAGTTTCACCAAAATGCTCTTCCCAAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000272 GO:0003006 GO:0003674 GO:0003824 GO:0004553 GO:0004650 GO:0005975 GO:0005976 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009555 GO:0009664 GO:0009791 GO:0009827 GO:0009830 GO:0009838 GO:0009900 GO:0009901 GO:0009908 GO:0009987 GO:0010047 GO:0010393 GO:0016043 GO:0016052 GO:0016787 GO:0016798 GO:0017144 GO:0019953 GO:0022411 GO:0022412 GO:0022414 GO:0030154 GO:0032501 GO:0032502 GO:0032504 GO:0042545 GO:0042737 GO:0043170 GO:0044237 GO:0044238 GO:0044248 GO:0044277 GO:0044703 GO:0045229 GO:0045488 GO:0045490 GO:0048229 GO:0048232 GO:0048235 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048608 GO:0048609 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0051704 GO:0055046 GO:0061458 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0090567 GO:0099402 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

Glyco_hydro_28

Protein Analysis

421

Amino Acids

45.82

Weight (kDa)

8.56

Isoelectric Point (pI)

35.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_28	PF00295	139 - 405	5.6e-88	Glycosyl hydrolases family 28

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010715)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07970
fragaria_vesca	FvH4_7g01140 FvH4_7g01140
malus_domestica	MD02G1309400.v1.1 MD07G1011600.v1.1
prunus_persica	Prupe.2G014800_v2.0.a1
pyrus_communis	pycom02g26060 pycom07g00970
rosa_chinensis	RchiOBHm_Chr1g0316321
rosa_laevigata	RLG00000030679
rosa_multiflora	Rmu_sc0002531.1_g000005 Rmu_sc0004511.1_g000005
rosa_roxburghii	Rroxscaffold_4G00331050
rosa_rugosa	Rorug01G0009700 Rorug01G0009700
rosa_samantha	Rh1AG019500 Rh1BG014600 Rh1CG017100 Rh1DG014500
rosa_wichuraiana	Rw1G001310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	794
AccB1I	GGYRCC	1 cut(s)	884
AccB7I	CCANNNNNTGG	1 cut(s)	800
AccI	GTMKAC	1 cut(s)	1065
AciI	CCGC	4 cut(s)	715, 789, 1056, 1103
AcoI	YGGCCR	1 cut(s)	79
AcsI	RAATTY	4 cut(s)	304, 472, 832, 1108
AcuI	CTGAAG	2 cut(s)	330, 1023
AfaI	GTAC	3 cut(s)	54, 105, 1170
AfeI	AGCGCT	1 cut(s)	1127
AfiI	CCNNNNNNNGG	2 cut(s)	800, 1033
AgsI	TTSAA	4 cut(s)	422, 628, 770, 962
AjiI	CACGTC	1 cut(s)	1159
AjnI	CCWGG	2 cut(s)	646, 793
AjuI	GAANNNNNNNTTGG	3 cut(s)	895, 927, 1237
Alw21I	GWGCWC	2 cut(s)	244, 330
Alw26I	GTCTC	1 cut(s)	142
Aor51HI	AGCGCT	1 cut(s)	1127
AoxI	GGCC	1 cut(s)	79
ApeKI	GCWGC	1 cut(s)	711
ApoI	RAATTY	4 cut(s)	304, 472, 832, 1108
ArsI	GACNNNNNNTTYG	2 cut(s)	381, 413
Asp700I	GAANNNNTTC	1 cut(s)	957
AspLEI	GCGC	3 cut(s)	512, 613, 1128
AspS9I	GGNCC	3 cut(s)	334, 380, 791
AsuHPI	GGTGA	4 cut(s)	391, 740, 967, 1233
AsuII	TTCGAA	1 cut(s)	951
AsuNHI	GCTAGC	1 cut(s)	773
AvaII	GGWCC	3 cut(s)	334, 380, 791
BalI	TGGCCA	1 cut(s)	81
BanI	GGYRCC	1 cut(s)	884
BanII	GRGCYC	2 cut(s)	244, 330
BauI	CACGAG	2 cut(s)	329, 505
Bbv12I	GWGCWC	2 cut(s)	244, 330
BbvI	GCAGC	1 cut(s)	698
BccI	CCATC	2 cut(s)	440, 662
BciT130I	CCWGG	2 cut(s)	648, 795
BclI	TGATCA	2 cut(s)	109, 1009
BcoDI	GTCTC	1 cut(s)	142
BfaI	CTAG	3 cut(s)	774, 1166, 1227
BfoI	RGCGCY	1 cut(s)	1129
BfuAI	ACCTGC	1 cut(s)	794
BisI	GCNGC	2 cut(s)	712, 715
BlsI	GCNGC	2 cut(s)	713, 716
Bme1390I	CCNGG	2 cut(s)	648, 795
Bme18I	GGWCC	3 cut(s)	334, 380, 791
BmgBI	CACGTC	1 cut(s)	1159
BmgT120I	GGNCC	3 cut(s)	334, 380, 791
BmiI	GGNNCC	4 cut(s)	96, 336, 569, 886
BmrFI	CCNGG	2 cut(s)	648, 795
BmsI	GCATC	2 cut(s)	447, 598
BmtI	GCTAGC	1 cut(s)	777
Bpu10I	CCTNAGC	2 cut(s)	820, 843
Bpu14I	TTCGAA	1 cut(s)	951
BpuEI	CTTGAG	1 cut(s)	228
Bsa29I	ATCGAT	1 cut(s)	444
BsaBI	GATNNNNATC	1 cut(s)	114
BsaI	GGTCTC	1 cut(s)	142
BsaJI	CCNNGG	3 cut(s)	210, 267, 647
BsaXI	ACNNNNNCTCC	4 cut(s)	24, 54, 306, 336
Bsc4I	CCNNNNNNNGG	2 cut(s)	800, 1033
Bse1I	ACTGG	3 cut(s)	136, 198, 439
Bse3DI	GCAATG	2 cut(s)	457, 769
Bse8I	GATNNNNATC	1 cut(s)	114
BseBI	CCWGG	2 cut(s)	648, 795
BseCI	ATCGAT	1 cut(s)	444
BseDI	CCNNGG	3 cut(s)	210, 267, 647
BseGI	GGATG	2 cut(s)	206, 1139
BseJI	GATNNNNATC	1 cut(s)	114
BseLI	CCNNNNNNNGG	2 cut(s)	800, 1033
BseMI	GCAATG	2 cut(s)	457, 769
BseMII	CTCAG	3 cut(s)	407, 554, 857
BseNI	ACTGG	3 cut(s)	136, 198, 439
BseRI	GAGGAG	3 cut(s)	32, 107, 270
BseXI	GCAGC	1 cut(s)	698
BshFI	GGCC	1 cut(s)	81
BshNI	GGYRCC	1 cut(s)	884
BshVI	ATCGAT	1 cut(s)	444
BsiHKAI	GWGCWC	2 cut(s)	244, 330
BslFI	GGGAC	3 cut(s)	320, 478, 642
BslI	CCNNNNNNNGG	2 cut(s)	800, 1033
BsmAI	GTCTC	1 cut(s)	142
BsmFI	GGGAC	3 cut(s)	320, 478, 642
BsmI	GAATGC	3 cut(s)	4, 580, 591
BsnI	GGCC	1 cut(s)	81
Bso31I	GGTCTC	1 cut(s)	142
Bsp119I	TTCGAA	1 cut(s)	951
Bsp1286I	GDGCHC	2 cut(s)	244, 330
Bsp143I	GATC	3 cut(s)	109, 1009, 1030
BspACI	CCGC	4 cut(s)	715, 789, 1056, 1103
BspANI	GGCC	1 cut(s)	81
BspCNI	CTCAG	3 cut(s)	406, 555, 856
BspDI	ATCGAT	1 cut(s)	444
BspLI	GGNNCC	4 cut(s)	96, 336, 569, 886
BspMI	ACCTGC	1 cut(s)	794
BspOI	GCTAGC	1 cut(s)	777
BspQI	GCTCTTC	1 cut(s)	1258
BspT104I	TTCGAA	1 cut(s)	951
BspT107I	GGYRCC	1 cut(s)	884
BspTNI	GGTCTC	1 cut(s)	142
BsrDI	GCAATG	2 cut(s)	457, 769
BsrI	ACTGG	3 cut(s)	136, 198, 439
BssECI	CCNNGG	3 cut(s)	210, 267, 647
BssMI	GATC	3 cut(s)	109, 1009, 1030
BssNAI	GTATAC	1 cut(s)	1066
BssSI	CACGAG	2 cut(s)	329, 505
BssT1I	CCWWGG	2 cut(s)	210, 267
Bst1107I	GTATAC	1 cut(s)	1066
Bst2BI	CACGAG	2 cut(s)	329, 505
Bst2UI	CCWGG	2 cut(s)	648, 795
Bst4CI	ACNGT	3 cut(s)	322, 656, 1007
Bst6I	CTCTTC	1 cut(s)	1258
BstAPI	GCANNNNNTGC	1 cut(s)	518
BstBI	TTCGAA	1 cut(s)	951
BstC8I	GCNNGC	3 cut(s)	298, 430, 775
BstDEI	CTNAG	5 cut(s)	339, 393, 563, 820, 843
BstEII	GGTNACC	1 cut(s)	397
BstF5I	GGATG	2 cut(s)	206, 1139
BstH2I	RGCGCY	1 cut(s)	1129
BstHHI	GCGC	3 cut(s)	512, 613, 1128
BstKTI	GATC	3 cut(s)	112, 1012, 1033
BstMAI	GTCTC	1 cut(s)	142
BstMBI	GATC	3 cut(s)	109, 1009, 1030
BstMWI	GCNNNNNNNGC	3 cut(s)	518, 708, 1125
BstNI	CCWGG	2 cut(s)	648, 795
BstNSI	RCATGY	1 cut(s)	300
BstPI	GGTNACC	1 cut(s)	397
BstSCI	CCNGG	2 cut(s)	646, 793
BstV1I	GCAGC	1 cut(s)	698
BstZ17I	GTATAC	1 cut(s)	1066
Bsu15I	ATCGAT	1 cut(s)	444
BsuRI	GGCC	1 cut(s)	81
BsuTUI	ATCGAT	1 cut(s)	444
BtrI	CACGTC	1 cut(s)	1159
BtsCI	GGATG	2 cut(s)	206, 1139
BtsI	GCAGTG	1 cut(s)	1126
BtsIMutI	CAGTG	5 cut(s)	205, 432, 542, 681, 1126
BveI	ACCTGC	1 cut(s)	794
Cac8I	GCNNGC	3 cut(s)	298, 430, 775
CfoI	GCGC	3 cut(s)	512, 613, 1128
Cfr13I	GGNCC	3 cut(s)	334, 380, 791
ClaI	ATCGAT	1 cut(s)	444
CsiI	ACCWGGT	1 cut(s)	793
Csp6I	GTAC	3 cut(s)	53, 104, 1169
CviAII	CATG	6 cut(s)	230, 285, 297, 677, 800, 1023
CviQI	GTAC	3 cut(s)	53, 104, 1169
DdeI	CTNAG	5 cut(s)	339, 393, 563, 820, 843
DpnI	GATC	3 cut(s)	111, 1011, 1032
DpnII	GATC	3 cut(s)	109, 1009, 1030
DraI	TTTAAA	1 cut(s)	415
EaeI	YGGCCR	1 cut(s)	79
Eam1104I	CTCTTC	1 cut(s)	1258
EarI	CTCTTC	1 cut(s)	1258
Ecl136II	GAGCTC	2 cut(s)	242, 328
Eco130I	CCWWGG	2 cut(s)	210, 267
Eco24I	GRGCYC	2 cut(s)	244, 330
Eco31I	GGTCTC	1 cut(s)	142
Eco47I	GGWCC	3 cut(s)	334, 380, 791
Eco47III	AGCGCT	1 cut(s)	1127
Eco53kI	GAGCTC	2 cut(s)	242, 328
Eco57I	CTGAAG	2 cut(s)	330, 1023
Eco91I	GGTNACC	1 cut(s)	397
EcoICRI	GAGCTC	2 cut(s)	242, 328
EcoO65I	GGTNACC	1 cut(s)	397
EcoRI	GAATTC	1 cut(s)	472
EcoRII	CCWGG	2 cut(s)	646, 793
EcoT14I	CCWWGG	2 cut(s)	210, 267
EcoT22I	ATGCAT	2 cut(s)	6, 591
EcoT38I	GRGCYC	2 cut(s)	244, 330
ErhI	CCWWGG	2 cut(s)	210, 267
FaeI	CATG	6 cut(s)	233, 288, 300, 680, 803, 1026
FaqI	GGGAC	3 cut(s)	320, 478, 642
FatI	CATG	6 cut(s)	229, 284, 296, 676, 799, 1022
FbaI	TGATCA	2 cut(s)	109, 1009
FblI	GTMKAC	1 cut(s)	1065
Fnu4HI	GCNGC	2 cut(s)	712, 715
FokI	GGATG	2 cut(s)	193, 1146
FriOI	GRGCYC	2 cut(s)	244, 330
Fsp4HI	GCNGC	2 cut(s)	712, 715
FspBI	CTAG	3 cut(s)	774, 1166, 1227
GlaI	GCGC	3 cut(s)	511, 612, 1127
GluI	GCNGC	2 cut(s)	712, 715
HaeII	RGCGCY	1 cut(s)	1129
HaeIII	GGCC	1 cut(s)	81
HhaI	GCGC	3 cut(s)	512, 613, 1128
Hin1II	CATG	6 cut(s)	233, 288, 300, 680, 803, 1026
Hin6I	GCGC	3 cut(s)	510, 611, 1126
HinP1I	GCGC	3 cut(s)	510, 611, 1126
HincII	GTYRAC	1 cut(s)	487
HindII	GTYRAC	1 cut(s)	487
HindIII	AAGCTT	3 cut(s)	621, 817, 875
HinfI	GANTC	5 cut(s)	491, 628, 672, 804, 903
HpaI	GTTAAC	1 cut(s)	487
HphI	GGTGA	4 cut(s)	391, 740, 967, 1233
Hpy166II	GTNNAC	4 cut(s)	487, 1066, 1162, 1177
Hpy188I	TCNGA	8 cut(s)	310, 564, 594, 603, 838, 853, 1133, 1209
Hpy188III	TCNNGA	4 cut(s)	571, 907, 1013, 1139
Hpy8I	GTNNAC	4 cut(s)	487, 1066, 1162, 1177
HpyAV	CCTTC	8 cut(s)	66, 79, 286, 305, 416, 450, 506, 1178
HpyCH4III	ACNGT	3 cut(s)	322, 656, 1007
HpyCH4IV	ACGT	2 cut(s)	596, 1158
HpyF10VI	GCNNNNNNNGC	3 cut(s)	518, 708, 1125
HpyF3I	CTNAG	5 cut(s)	339, 393, 563, 820, 843
HpySE526I	ACGT	2 cut(s)	596, 1158
Hsp92II	CATG	6 cut(s)	233, 288, 300, 680, 803, 1026
HspAI	GCGC	3 cut(s)	510, 611, 1126
Ksp22I	TGATCA	2 cut(s)	109, 1009
KspAI	GTTAAC	1 cut(s)	487
Kzo9I	GATC	3 cut(s)	109, 1009, 1030
LguI	GCTCTTC	1 cut(s)	1258
LmnI	GCTCC	4 cut(s)	94, 184, 239, 824
Lsp1109I	GCAGC	1 cut(s)	698
LweI	GCATC	2 cut(s)	447, 598
MabI	ACCWGGT	1 cut(s)	793
MaeI	CTAG	3 cut(s)	774, 1166, 1227
MaeII	ACGT	2 cut(s)	596, 1158
MaeIII	GTNAC	7 cut(s)	30, 316, 397, 523, 679, 728, 973
MalI	GATC	3 cut(s)	111, 1011, 1032
MboI	GATC	3 cut(s)	109, 1009, 1030
MboII	GAAGA	2 cut(s)	301, 1245
MhlI	GDGCHC	2 cut(s)	244, 330
MlsI	TGGCCA	1 cut(s)	81
MluCI	AATT	8 cut(s)	139, 304, 366, 472, 544, 832, 1108, 1188
MluNI	TGGCCA	1 cut(s)	81
MlyI	GAGTC	1 cut(s)	500
MmeI	TCCRAC	1 cut(s)	1195
Mox20I	TGGCCA	1 cut(s)	81
Mph1103I	ATGCAT	2 cut(s)	6, 591
MroXI	GAANNNNTTC	1 cut(s)	957
MscI	TGGCCA	1 cut(s)	81
MseI	TTAA	6 cut(s)	167, 222, 405, 414, 486, 899
MslI	CAYNNNNRTG	2 cut(s)	1005, 1246
Msp20I	TGGCCA	1 cut(s)	81
MspA1I	CMGCKG	2 cut(s)	711, 1043
MspR9I	CCNGG	2 cut(s)	648, 795
Mva1269I	GAATGC	3 cut(s)	4, 580, 591
MvaI	CCWGG	2 cut(s)	648, 795
MwoI	GCNNNNNNNGC	3 cut(s)	518, 708, 1125
NdeII	GATC	3 cut(s)	109, 1009, 1030
NheI	GCTAGC	1 cut(s)	773
NlaIII	CATG	6 cut(s)	233, 288, 300, 680, 803, 1026
NlaIV	GGNNCC	4 cut(s)	96, 336, 569, 886
NmuCI	GTSAC	6 cut(s)	30, 397, 523, 679, 728, 973
NsiI	ATGCAT	2 cut(s)	6, 591
NspI	RCATGY	1 cut(s)	300
NspV	TTCGAA	1 cut(s)	951
PaeI	GCATGC	1 cut(s)	300
PciSI	GCTCTTC	1 cut(s)	1258
PctI	GAATGC	3 cut(s)	4, 580, 591
PdmI	GAANNNNTTC	1 cut(s)	957
PfeI	GAWTC	4 cut(s)	628, 672, 804, 903
PflFI	GACNNNGTC	1 cut(s)	795
PflMI	CCANNNNNTGG	1 cut(s)	800
PkrI	GCNGC	2 cut(s)	713, 716
PleI	GAGTC	1 cut(s)	499
PpsI	GAGTC	1 cut(s)	499
Psp124BI	GAGCTC	2 cut(s)	244, 330
Psp6I	CCWGG	2 cut(s)	646, 793
PspEI	GGTNACC	1 cut(s)	397
PspGI	CCWGG	2 cut(s)	646, 793
PspN4I	GGNNCC	4 cut(s)	96, 336, 569, 886
PspPI	GGNCC	3 cut(s)	334, 380, 791
PsyI	GACNNNGTC	1 cut(s)	795
PvuII	CAGCTG	2 cut(s)	711, 1043
RsaI	GTAC	3 cut(s)	54, 105, 1170
RsaNI	GTAC	3 cut(s)	53, 104, 1169
RseI	CAYNNNNRTG	2 cut(s)	1005, 1246
SacI	GAGCTC	2 cut(s)	244, 330
SapI	GCTCTTC	1 cut(s)	1258
SaqAI	TTAA	6 cut(s)	167, 222, 405, 414, 486, 899
SatI	GCNGC	2 cut(s)	712, 715
Sau3AI	GATC	3 cut(s)	109, 1009, 1030
Sau96I	GGNCC	3 cut(s)	334, 380, 791
SchI	GAGTC	1 cut(s)	500
ScrFI	CCNGG	2 cut(s)	648, 795
SduI	GDGCHC	2 cut(s)	244, 330
SexAI	ACCWGGT	1 cut(s)	793
SfaNI	GCATC	2 cut(s)	447, 598
SfuI	TTCGAA	1 cut(s)	951
SinI	GGWCC	3 cut(s)	334, 380, 791
SmiMI	CAYNNNNRTG	2 cut(s)	1005, 1246
SmlI	CTYRAG	1 cut(s)	243
SmoI	CTYRAG	1 cut(s)	243
SphI	GCATGC	1 cut(s)	300
Sse9I	AATT	8 cut(s)	139, 304, 366, 472, 544, 832, 1108, 1188
SsiI	CCGC	4 cut(s)	715, 789, 1056, 1103
SspI	AATATT	1 cut(s)	165
SspMI	CTAG	3 cut(s)	774, 1166, 1227
SstI	GAGCTC	2 cut(s)	244, 330
StyD4I	CCNGG	2 cut(s)	646, 793
StyI	CCWWGG	2 cut(s)	210, 267
TaaI	ACNGT	3 cut(s)	322, 656, 1007
TaiI	ACGT	2 cut(s)	599, 1161
TaqI	TCGA	4 cut(s)	444, 743, 951, 1113
TasI	AATT	8 cut(s)	139, 304, 366, 472, 544, 832, 1108, 1188
TatI	WGTACW	1 cut(s)	103
TauI	GCSGC	1 cut(s)	717
TfiI	GAWTC	4 cut(s)	628, 672, 804, 903
Tru1I	TTAA	6 cut(s)	167, 222, 405, 414, 486, 899
Tru9I	TTAA	6 cut(s)	167, 222, 405, 414, 486, 899
TscAI	CASTG	5 cut(s)	205, 439, 542, 688, 1126
TseFI	GTSAC	6 cut(s)	30, 397, 523, 679, 728, 973
TseI	GCWGC	1 cut(s)	711
Tsp45I	GTSAC	6 cut(s)	30, 397, 523, 679, 728, 973
TspDTI	ATGAA	3 cut(s)	48, 195, 1197
TspRI	CASTG	5 cut(s)	205, 439, 542, 688, 1126
Tth111I	GACNNNGTC	1 cut(s)	795
Van91I	CCANNNNNTGG	1 cut(s)	800
VpaK11BI	GGWCC	3 cut(s)	334, 380, 791
XapI	RAATTY	4 cut(s)	304, 472, 832, 1108
XceI	RCATGY	1 cut(s)	300
XmiI	GTMKAC	1 cut(s)	1065
XmnI	GAANNNNTTC	1 cut(s)	957
XspI	CTAG	3 cut(s)	774, 1166, 1227
Zsp2I	ATGCAT	2 cut(s)	6, 591

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.