Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0010715

Physical Location & Seq

Genomic Coordinates Forward (+)

3589721 .. 3593334

Gene Structure 3614 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG019500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1362 bp

ATGCAATATTCTTCATCTCAAATCCATTTTCTGTCACTATTCCTCCTTCTCATCATTGTACCTTCATATTTTTCCTTCCCTCTTGGCCATAACCATAACCCAGAGGAGCCACCTGTACTTGATCATCATCAAAAAACCTATACTGGTCATAATTTTTTGAGACCCTACCCTACAATATTAAGGACAAGCAGGAGGGAGCTTATTACAGCCAGTGCTTCATCCAAGGTTGTTTTTAATGTGCATGATTTTGGAGCTCAAGCAAATGGAGGAGATGATACCAAGGCATTTAGGAACGCATGGAAGAAGGCATGCTCAAATTCTGAAGGAAAAACTGTTGAGCTCGTGGTCCCTAAGAACAGAAACTATCACATCAAACCAATTACATTCTCTGGTCCTTGCAAATCTCAGGTCACCTTTAAGATTTATGGAACGATCAAAGCATCACCATTTCTATTGGATTACGAAAGGGACAGTAGCCATTGGATTATGTTCGAGAATTTGCAGAACTTTAAAGTTGAAGGTGCTGGCACTGGCATCATCAATGGAAATGGAAGGAAATGGTGGGAGAATTCTTGCAAAGTTAACGAGTCCCTTCCTTGCACGAGCGCACCAACTGCTGTGACTTTCTATCAGTGCAATAATTTGGACGTAGCAAATCTGAGGTTCCAGAATGCACAGAGAATGCATCTGACGTTTCAGAAATGTGCGCTTGTAAAAGTTTTGAATCTCATTATAACAGCACCAGGGAACAGTCCTAACACCGATGGAATCCATGTCACTGAAACACAAGATATTCGCATAAACAGCTGCCGCATTAGGACAGGTGACGACTGTATTTCGATAGTAAGTGGGTCAAGGAATGTTCAAGCTAGCGATATAACCTGCGGACCAGGTCATGGAATCAGTATTGGAAGCTTAGGAGCTGAAAATTCAGAAGCTCAGGTTTCCGATGTGGTAGTAAGTAGAGCGAACCTTATAGGCACCACTAATGGATTAAGAATCAAGACTTGGCAAGGAGGTTCTGGTTATGCAAAAAACATCAGATTCGAAAATGTTCTAATGCACAATGTCACCAATCCCATAATCATAGATCAACATTACTGTGATCAGGAAAAACCATGCCAAGATCAGGCTTCAGCTGTAAAAGTAAGCGGAGTGGTATACCAAAATGTGAAAGGCACAAGTGCTTCTAAAGTGGCGGTAAATTTCGATTGCAGTGAGCGCTTCGGATGTCAAGAGATTTTGGTGCAAGACGTGAACATAGTACCTCTAAACGATGAAGGAATTACGACAGCTTCTTGTCAGAATGTTGGATTACGCGATAGAGGGATAGTTTCACCAAAATGCTCTTCCCAAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000272 GO:0003006 GO:0003674 GO:0003824 GO:0004553 GO:0004650 GO:0005975 GO:0005976 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009555 GO:0009664 GO:0009791 GO:0009827 GO:0009830 GO:0009838 GO:0009900 GO:0009901 GO:0009908 GO:0009987 GO:0010047 GO:0010393 GO:0016043 GO:0016052 GO:0016787 GO:0016798 GO:0017144 GO:0019953 GO:0022411 GO:0022412 GO:0022414 GO:0030154 GO:0032501 GO:0032502 GO:0032504 GO:0042545 GO:0042737 GO:0043170 GO:0044237 GO:0044238 GO:0044248 GO:0044277 GO:0044703 GO:0045229 GO:0045488 GO:0045490 GO:0048229 GO:0048232 GO:0048235 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048608 GO:0048609 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0051704 GO:0055046 GO:0061458 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0090567 GO:0099402 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

Glyco_hydro_28

Protein Analysis

453

Amino Acids

49.89

Weight (kDa)

8.54

Isoelectric Point (pI)

35.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_28	PF00295	108 - 437	3.7e-98	Glycosyl hydrolases family 28

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010715)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07970
fragaria_vesca	FvH4_7g01140 FvH4_7g01140
malus_domestica	MD02G1309400.v1.1 MD07G1011600.v1.1
prunus_persica	Prupe.2G014800_v2.0.a1
pyrus_communis	pycom02g26060 pycom07g00970
rosa_chinensis	RchiOBHm_Chr1g0316321
rosa_laevigata	RLG00000030679
rosa_multiflora	Rmu_sc0002531.1_g000005 Rmu_sc0004511.1_g000005
rosa_roxburghii	Rroxscaffold_4G00331050
rosa_rugosa	Rorug01G0009700 Rorug01G0009700
rosa_samantha	Rh1AG019500 Rh1BG014600 Rh1CG017100 Rh1DG014500
rosa_wichuraiana	Rw1G001310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	734
Acc36I	ACCTGC	1 cut(s)	890
AccB1I	GGYRCC	1 cut(s)	980
AccB7I	CCANNNNNTGG	1 cut(s)	896
AccI	GTMKAC	1 cut(s)	1161
AccII	CGCG	1 cut(s)	1320
AciI	CCGC	4 cut(s)	811, 885, 1152, 1199
AcoI	YGGCCR	1 cut(s)	85
AcsI	RAATTY	5 cut(s)	316, 496, 568, 928, 1204
AcuI	CTGAAG	2 cut(s)	342, 1119
AfaI	GTAC	3 cut(s)	60, 117, 1266
AfeI	AGCGCT	1 cut(s)	1223
AfiI	CCNNNNNNNGG	2 cut(s)	896, 1129
AgsI	TTSAA	3 cut(s)	518, 724, 866
AjiI	CACGTC	1 cut(s)	1255
AjnI	CCWGG	2 cut(s)	742, 889
AjuI	GAANNNNNNNTTGG	3 cut(s)	991, 1023, 1333
Alw21I	GWGCWC	2 cut(s)	256, 342
Alw26I	GTCTC	1 cut(s)	154
Aor51HI	AGCGCT	1 cut(s)	1223
AoxI	GGCC	1 cut(s)	85
ApeKI	GCWGC	1 cut(s)	807
ApoI	RAATTY	5 cut(s)	316, 496, 568, 928, 1204
ArsI	GACNNNNNNTTYG	2 cut(s)	393, 425
Asp700I	GAANNNNTTC	1 cut(s)	1053
AspLEI	GCGC	3 cut(s)	608, 709, 1224
AspS9I	GGNCC	3 cut(s)	346, 392, 887
AsuHPI	GGTGA	5 cut(s)	403, 435, 836, 1063, 1329
AsuII	TTCGAA	1 cut(s)	1047
AsuNHI	GCTAGC	1 cut(s)	869
AvaII	GGWCC	3 cut(s)	346, 392, 887
BalI	TGGCCA	1 cut(s)	87
BanI	GGYRCC	1 cut(s)	980
BanII	GRGCYC	2 cut(s)	256, 342
BauI	CACGAG	2 cut(s)	341, 601
Bbv12I	GWGCWC	2 cut(s)	256, 342
BbvI	GCAGC	1 cut(s)	794
BccI	CCATC	1 cut(s)	758
BciT130I	CCWGG	2 cut(s)	744, 891
BclI	TGATCA	2 cut(s)	121, 1105
BcoDI	GTCTC	1 cut(s)	154
BfaI	CTAG	1 cut(s)	870
BfoI	RGCGCY	1 cut(s)	1225
BfuAI	ACCTGC	1 cut(s)	890
BisI	GCNGC	2 cut(s)	808, 811
BlsI	GCNGC	2 cut(s)	809, 812
Bme1390I	CCNGG	2 cut(s)	744, 891
Bme18I	GGWCC	3 cut(s)	346, 392, 887
BmgBI	CACGTC	1 cut(s)	1255
BmgT120I	GGNCC	3 cut(s)	346, 392, 887
BmiI	GGNNCC	4 cut(s)	108, 348, 665, 982
BmrFI	CCNGG	2 cut(s)	744, 891
BmsI	GCATC	3 cut(s)	449, 543, 694
BmtI	GCTAGC	1 cut(s)	873
Bpu10I	CCTNAGC	2 cut(s)	916, 939
Bpu14I	TTCGAA	1 cut(s)	1047
BpuEI	CTTGAG	1 cut(s)	240
BsaBI	GATNNNNATC	1 cut(s)	126
BsaI	GGTCTC	1 cut(s)	154
BsaJI	CCNNGG	3 cut(s)	222, 279, 743
BsaXI	ACNNNNNCTCC	2 cut(s)	27, 57
Bsc4I	CCNNNNNNNGG	2 cut(s)	896, 1129
Bse1I	ACTGG	3 cut(s)	148, 210, 535
Bse8I	GATNNNNATC	1 cut(s)	126
BseBI	CCWGG	2 cut(s)	744, 891
BseDI	CCNNGG	3 cut(s)	222, 279, 743
BseGI	GGATG	2 cut(s)	218, 1235
BseJI	GATNNNNATC	1 cut(s)	126
BseLI	CCNNNNNNNGG	2 cut(s)	896, 1129
BseMII	CTCAG	3 cut(s)	419, 650, 953
BseNI	ACTGG	3 cut(s)	148, 210, 535
BseRI	GAGGAG	2 cut(s)	119, 282
BseXI	GCAGC	1 cut(s)	794
Bsh1236I	CGCG	1 cut(s)	1320
BshFI	GGCC	1 cut(s)	87
BshNI	GGYRCC	1 cut(s)	980
BsiHKAI	GWGCWC	2 cut(s)	256, 342
BslFI	GGGAC	3 cut(s)	332, 482, 574
BslI	CCNNNNNNNGG	2 cut(s)	896, 1129
BsmAI	GTCTC	1 cut(s)	154
BsmFI	GGGAC	3 cut(s)	332, 482, 574
BsmI	GAATGC	2 cut(s)	676, 687
BsnI	GGCC	1 cut(s)	87
Bso31I	GGTCTC	1 cut(s)	154
Bsp119I	TTCGAA	1 cut(s)	1047
Bsp1286I	GDGCHC	2 cut(s)	256, 342
Bsp143I	GATC	5 cut(s)	121, 432, 1090, 1105, 1126
BspACI	CCGC	4 cut(s)	811, 885, 1152, 1199
BspANI	GGCC	1 cut(s)	87
BspCNI	CTCAG	3 cut(s)	418, 651, 952
BspFNI	CGCG	1 cut(s)	1320
BspLI	GGNNCC	4 cut(s)	108, 348, 665, 982
BspMI	ACCTGC	1 cut(s)	890
BspOI	GCTAGC	1 cut(s)	873
BspQI	GCTCTTC	1 cut(s)	1354
BspT104I	TTCGAA	1 cut(s)	1047
BspT107I	GGYRCC	1 cut(s)	980
BspTNI	GGTCTC	1 cut(s)	154
BsrI	ACTGG	3 cut(s)	148, 210, 535
BssECI	CCNNGG	3 cut(s)	222, 279, 743
BssMI	GATC	5 cut(s)	121, 432, 1090, 1105, 1126
BssNAI	GTATAC	1 cut(s)	1162
BssSI	CACGAG	2 cut(s)	341, 601
BssT1I	CCWWGG	2 cut(s)	222, 279
Bst1107I	GTATAC	1 cut(s)	1162
Bst2BI	CACGAG	2 cut(s)	341, 601
Bst2UI	CCWGG	2 cut(s)	744, 891
Bst4CI	ACNGT	5 cut(s)	334, 473, 752, 833, 1103
Bst6I	CTCTTC	1 cut(s)	1354
BstAPI	GCANNNNNTGC	1 cut(s)	614
BstBI	TTCGAA	1 cut(s)	1047
BstC8I	GCNNGC	3 cut(s)	310, 526, 871
BstDEI	CTNAG	5 cut(s)	351, 405, 659, 916, 939
BstEII	GGTNACC	1 cut(s)	409
BstF5I	GGATG	2 cut(s)	218, 1235
BstFNI	CGCG	1 cut(s)	1320
BstH2I	RGCGCY	1 cut(s)	1225
BstHHI	GCGC	3 cut(s)	608, 709, 1224
BstKTI	GATC	5 cut(s)	124, 435, 1093, 1108, 1129
BstMAI	GTCTC	1 cut(s)	154
BstMBI	GATC	5 cut(s)	121, 432, 1090, 1105, 1126
BstMWI	GCNNNNNNNGC	3 cut(s)	614, 804, 1221
BstNI	CCWGG	2 cut(s)	744, 891
BstNSI	RCATGY	1 cut(s)	312
BstPI	GGTNACC	1 cut(s)	409
BstSCI	CCNGG	2 cut(s)	742, 889
BstUI	CGCG	1 cut(s)	1320
BstV1I	GCAGC	1 cut(s)	794
BstZ17I	GTATAC	1 cut(s)	1162
BsuRI	GGCC	1 cut(s)	87
BtrI	CACGTC	1 cut(s)	1255
BtsCI	GGATG	2 cut(s)	218, 1235
BtsI	GCAGTG	1 cut(s)	1222
BtsIMutI	CAGTG	5 cut(s)	217, 528, 638, 777, 1222
BveI	ACCTGC	1 cut(s)	890
Cac8I	GCNNGC	3 cut(s)	310, 526, 871
CfoI	GCGC	3 cut(s)	608, 709, 1224
Cfr13I	GGNCC	3 cut(s)	346, 392, 887
CsiI	ACCWGGT	1 cut(s)	889
Csp6I	GTAC	3 cut(s)	59, 116, 1265
CviAII	CATG	6 cut(s)	242, 297, 309, 773, 896, 1119
CviQI	GTAC	3 cut(s)	59, 116, 1265
DdeI	CTNAG	5 cut(s)	351, 405, 659, 916, 939
DpnI	GATC	5 cut(s)	123, 434, 1092, 1107, 1128
DpnII	GATC	5 cut(s)	121, 432, 1090, 1105, 1126
DraI	TTTAAA	1 cut(s)	511
EaeI	YGGCCR	1 cut(s)	85
Eam1104I	CTCTTC	1 cut(s)	1354
EarI	CTCTTC	1 cut(s)	1354
Ecl136II	GAGCTC	2 cut(s)	254, 340
Eco130I	CCWWGG	2 cut(s)	222, 279
Eco24I	GRGCYC	2 cut(s)	256, 342
Eco31I	GGTCTC	1 cut(s)	154
Eco47I	GGWCC	3 cut(s)	346, 392, 887
Eco47III	AGCGCT	1 cut(s)	1223
Eco53kI	GAGCTC	2 cut(s)	254, 340
Eco57I	CTGAAG	2 cut(s)	342, 1119
Eco91I	GGTNACC	1 cut(s)	409
EcoICRI	GAGCTC	2 cut(s)	254, 340
EcoO65I	GGTNACC	1 cut(s)	409
EcoRI	GAATTC	1 cut(s)	568
EcoRII	CCWGG	2 cut(s)	742, 889
EcoT14I	CCWWGG	2 cut(s)	222, 279
EcoT22I	ATGCAT	1 cut(s)	687
EcoT38I	GRGCYC	2 cut(s)	256, 342
ErhI	CCWWGG	2 cut(s)	222, 279
FaeI	CATG	6 cut(s)	245, 300, 312, 776, 899, 1122
FaqI	GGGAC	3 cut(s)	332, 482, 574
FatI	CATG	6 cut(s)	241, 296, 308, 772, 895, 1118
FbaI	TGATCA	2 cut(s)	121, 1105
FblI	GTMKAC	1 cut(s)	1161
Fnu4HI	GCNGC	2 cut(s)	808, 811
FokI	GGATG	2 cut(s)	205, 1242
FriOI	GRGCYC	2 cut(s)	256, 342
Fsp4HI	GCNGC	2 cut(s)	808, 811
FspBI	CTAG	1 cut(s)	870
GlaI	GCGC	3 cut(s)	607, 708, 1223
GluI	GCNGC	2 cut(s)	808, 811
HaeII	RGCGCY	1 cut(s)	1225
HaeIII	GGCC	1 cut(s)	87
HhaI	GCGC	3 cut(s)	608, 709, 1224
Hin1II	CATG	6 cut(s)	245, 300, 312, 776, 899, 1122
Hin6I	GCGC	3 cut(s)	606, 707, 1222
HinP1I	GCGC	3 cut(s)	606, 707, 1222
HincII	GTYRAC	1 cut(s)	583
HindII	GTYRAC	1 cut(s)	583
HindIII	AAGCTT	1 cut(s)	913
HinfI	GANTC	6 cut(s)	587, 724, 768, 900, 999, 1044
HpaI	GTTAAC	1 cut(s)	583
HphI	GGTGA	5 cut(s)	403, 435, 836, 1063, 1329
Hpy166II	GTNNAC	3 cut(s)	583, 1162, 1258
Hpy188I	TCNGA	9 cut(s)	322, 660, 690, 699, 934, 949, 1043, 1229, 1305
Hpy188III	TCNNGA	5 cut(s)	493, 667, 1003, 1109, 1235
Hpy8I	GTNNAC	3 cut(s)	583, 1162, 1258
HpyAV	CCTTC	9 cut(s)	56, 72, 85, 298, 317, 512, 546, 602, 1274
HpyCH4III	ACNGT	5 cut(s)	334, 473, 752, 833, 1103
HpyCH4IV	ACGT	3 cut(s)	648, 692, 1254
HpyF10VI	GCNNNNNNNGC	3 cut(s)	614, 804, 1221
HpyF3I	CTNAG	5 cut(s)	351, 405, 659, 916, 939
HpySE526I	ACGT	3 cut(s)	648, 692, 1254
Hsp92II	CATG	6 cut(s)	245, 300, 312, 776, 899, 1122
HspAI	GCGC	3 cut(s)	606, 707, 1222
Ksp22I	TGATCA	2 cut(s)	121, 1105
KspAI	GTTAAC	1 cut(s)	583
Kzo9I	GATC	5 cut(s)	121, 432, 1090, 1105, 1126
LguI	GCTCTTC	1 cut(s)	1354
LmnI	GCTCC	4 cut(s)	106, 196, 251, 920
Lsp1109I	GCAGC	1 cut(s)	794
LweI	GCATC	3 cut(s)	449, 543, 694
MabI	ACCWGGT	1 cut(s)	889
MaeI	CTAG	1 cut(s)	870
MaeII	ACGT	3 cut(s)	648, 692, 1254
MaeIII	GTNAC	6 cut(s)	33, 409, 619, 775, 824, 1069
MalI	GATC	5 cut(s)	123, 434, 1092, 1107, 1128
MboI	GATC	5 cut(s)	121, 432, 1090, 1105, 1126
MboII	GAAGA	3 cut(s)	3, 313, 1341
MhlI	GDGCHC	2 cut(s)	256, 342
MlsI	TGGCCA	1 cut(s)	87
MluCI	AATT	9 cut(s)	151, 316, 378, 496, 568, 640, 928, 1204, 1284
MluNI	TGGCCA	1 cut(s)	87
MlyI	GAGTC	1 cut(s)	596
MmeI	TCCRAC	1 cut(s)	1291
MnlI	CCTC	9 cut(s)	53, 90, 97, 186, 260, 654, 1010, 1278, 1319
Mox20I	TGGCCA	1 cut(s)	87
Mph1103I	ATGCAT	1 cut(s)	687
MroXI	GAANNNNTTC	1 cut(s)	1053
MscI	TGGCCA	1 cut(s)	87
MseI	TTAA	6 cut(s)	179, 234, 417, 510, 582, 995
MslI	CAYNNNNRTG	2 cut(s)	1101, 1342
Msp20I	TGGCCA	1 cut(s)	87
MspA1I	CMGCKG	2 cut(s)	807, 1139
MspR9I	CCNGG	2 cut(s)	744, 891
Mva1269I	GAATGC	2 cut(s)	676, 687
MvaI	CCWGG	2 cut(s)	744, 891
MvnI	CGCG	1 cut(s)	1320
MwoI	GCNNNNNNNGC	3 cut(s)	614, 804, 1221
NdeII	GATC	5 cut(s)	121, 432, 1090, 1105, 1126
NheI	GCTAGC	1 cut(s)	869
NlaIII	CATG	6 cut(s)	245, 300, 312, 776, 899, 1122
NlaIV	GGNNCC	4 cut(s)	108, 348, 665, 982
NmuCI	GTSAC	6 cut(s)	33, 409, 619, 775, 824, 1069
NsiI	ATGCAT	1 cut(s)	687
NspI	RCATGY	1 cut(s)	312
NspV	TTCGAA	1 cut(s)	1047
PaeI	GCATGC	1 cut(s)	312
PciSI	GCTCTTC	1 cut(s)	1354
PctI	GAATGC	2 cut(s)	676, 687
PdmI	GAANNNNTTC	1 cut(s)	1053
PfeI	GAWTC	5 cut(s)	724, 768, 900, 999, 1044
PflFI	GACNNNGTC	1 cut(s)	891
PflMI	CCANNNNNTGG	1 cut(s)	896
PkrI	GCNGC	2 cut(s)	809, 812
PleI	GAGTC	1 cut(s)	595
PpsI	GAGTC	1 cut(s)	595
PsiI	TTATAA	1 cut(s)	734
Psp124BI	GAGCTC	2 cut(s)	256, 342
Psp6I	CCWGG	2 cut(s)	742, 889
PspEI	GGTNACC	1 cut(s)	409
PspGI	CCWGG	2 cut(s)	742, 889
PspN4I	GGNNCC	4 cut(s)	108, 348, 665, 982
PspPI	GGNCC	3 cut(s)	346, 392, 887
PsyI	GACNNNGTC	1 cut(s)	891
PvuII	CAGCTG	2 cut(s)	807, 1139
RsaI	GTAC	3 cut(s)	60, 117, 1266
RsaNI	GTAC	3 cut(s)	59, 116, 1265
RseI	CAYNNNNRTG	2 cut(s)	1101, 1342
SacI	GAGCTC	2 cut(s)	256, 342
SapI	GCTCTTC	1 cut(s)	1354
SaqAI	TTAA	6 cut(s)	179, 234, 417, 510, 582, 995
SatI	GCNGC	2 cut(s)	808, 811
Sau3AI	GATC	5 cut(s)	121, 432, 1090, 1105, 1126
Sau96I	GGNCC	3 cut(s)	346, 392, 887
SchI	GAGTC	1 cut(s)	596
ScrFI	CCNGG	2 cut(s)	744, 891
SduI	GDGCHC	2 cut(s)	256, 342
SexAI	ACCWGGT	1 cut(s)	889
SfaNI	GCATC	3 cut(s)	449, 543, 694
SfuI	TTCGAA	1 cut(s)	1047
SinI	GGWCC	3 cut(s)	346, 392, 887
SmiMI	CAYNNNNRTG	2 cut(s)	1101, 1342
SmlI	CTYRAG	1 cut(s)	255
SmoI	CTYRAG	1 cut(s)	255
SphI	GCATGC	1 cut(s)	312
Sse9I	AATT	9 cut(s)	151, 316, 378, 496, 568, 640, 928, 1204, 1284
SsiI	CCGC	4 cut(s)	811, 885, 1152, 1199
SspI	AATATT	2 cut(s)	8, 177
SspMI	CTAG	1 cut(s)	870
SstI	GAGCTC	2 cut(s)	256, 342
StyD4I	CCNGG	2 cut(s)	742, 889
StyI	CCWWGG	2 cut(s)	222, 279
TaaI	ACNGT	5 cut(s)	334, 473, 752, 833, 1103
TaiI	ACGT	3 cut(s)	651, 695, 1257
TaqI	TCGA	4 cut(s)	492, 839, 1047, 1209
TasI	AATT	9 cut(s)	151, 316, 378, 496, 568, 640, 928, 1204, 1284
TatI	WGTACW	1 cut(s)	115
TauI	GCSGC	1 cut(s)	813
TfiI	GAWTC	5 cut(s)	724, 768, 900, 999, 1044
Tru1I	TTAA	6 cut(s)	179, 234, 417, 510, 582, 995
Tru9I	TTAA	6 cut(s)	179, 234, 417, 510, 582, 995
TscAI	CASTG	5 cut(s)	217, 535, 638, 784, 1222
TseFI	GTSAC	6 cut(s)	33, 409, 619, 775, 824, 1069
TseI	GCWGC	1 cut(s)	807
Tsp45I	GTSAC	6 cut(s)	33, 409, 619, 775, 824, 1069
TspDTI	ATGAA	3 cut(s)	54, 207, 1293
TspRI	CASTG	5 cut(s)	217, 535, 638, 784, 1222
Tth111I	GACNNNGTC	1 cut(s)	891
Van91I	CCANNNNNTGG	1 cut(s)	896
VpaK11BI	GGWCC	3 cut(s)	346, 392, 887
XapI	RAATTY	5 cut(s)	316, 496, 568, 928, 1204
XceI	RCATGY	1 cut(s)	312
XmiI	GTMKAC	1 cut(s)	1161
XmnI	GAANNNNTTC	1 cut(s)	1053
XspI	CTAG	1 cut(s)	870
Zsp2I	ATGCAT	1 cut(s)	687

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.