Rroxscaffold_5G00379170

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0009465
Physical Location & Seq
Reverse (-)
59639592 .. 59647415
7824 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00379170.1

Sequence Viewer

Length: 2532 bp
ATGGATCCGACCGGCACCCCTCGCCGGACCCGAAATATCCCGCCGAAACCCGACCTCTACTCCACCGTAGTCGTCCACGGCGACGAAGATTCCACCTCCGAATCCAACCGAGACCGGCGGCGCGGCAACCAGGAACCCGACCCGTACGCCACATTCGACTTCGGCGGCGGCGCCTCCCTAAACTACTTCGACGACGAGGACGACAACGGCGGCGATTTCGGCACCGTGATCGTCAAGAGCGACCGCAATCGGACCACCAGGAGGTCGTCACGTGACTGGGGGAGCCGTGCCGCGGAGGCGGAGGACGGTGACGGCGGAGATGCGTTCTCGACGTTTGTGATGAGGCCGAGTGAGAGAGAGTCGTCGCTGACCGGGACGGTGAGGAGGACCAGCGGCGGCAGTTCCACGATGAGCAGGGCGGTGGCGAGTATGCAGGCGTCCGGCGACGGGATGGGGAAGCAGAGGAAGAGCAGTGCCGCCTCGTCGCAAAACGAGGAGGCTCGCCAGAATATGAAAATGTCGGCCAGTTCCATACCGGAAAGCGTCACCAGAGAAGATCCGACTACAAAGTACGAGTTGCTCAATGAGCTTGGGAAGGGGTCTTATGGTGCGGTTTATAAAGCTAGGGACTTAAAGACTTCCGAGCTGGTGGCAATTAAAGTCATTTCATTATCTCAAGGGGAGGAAGGGTATGAAGAGATTTGTGGTGAAATCGAGATGCTGCAGCAATGCAGTCATCCGAATGTCGTTCGGTACTTGGGGAGCTACCAAGGAGAAGAGTATCTTTGGATTGTGATGGAGTATTGTGGTGGTGGAAGTGTTGCTGACTTAATGAATGTTACCGAGGATGCTTTGGAGGAGTATCAAATAGCTTACATTTGCAGGGAAGCATTGAAGGGCCTTGCTTATTTGCACTCAATTTTCAAGGTCCACAGAGATATTAAGGGTGGTAATATTCTGTTAACTGAACAAGGAGATGTCAAGTTGGGTGACTTTGGGGTTGCAGCACAGCTTACAAGGACCATGTCAAAGCGCAATACGTTCATTGGGACTCCACATTGGATGGCTCCAGAAGTTATTCAGGAAAGCCGCTATGATGGAAAGGTGGATGTATGGGCTCTTGGTGTTTCTGCAATTGAAATGGCTGAGGGACTTCCTCCAAGATCTGCGGTGCATCCAATGAGGGTTCTATTCATGATATCCCTTGAGCCAGCTCCGATGCTTGAGGATAAAGAAAAATGGTCCGTTTTCATTCTTTTCTGTGTGATCTTTTCTACCAATTCCAATGACATTAGCCTATCATGCTCAGATGCTCTTGAACATCCTATGAACTTGGCCGTCTCCTTTTTCAGGTCTCTTGTGTTTCATGATTTTGTAGCGAAGTGCCTGACAAAAGAACCTCGGCTACGCCCTACTGCAGCTGAGATGTTGAAGCACAAATTCATCGAAAAATGCAAATGTGGTCCCTCTGCAATGGTGCCAAGGATTGAGAAGGCCAGGCAAATTAGGACCTCTATGGCTTTGCAAGCACAAAATGAAGCTCCAGATGAACAGGAAGACGATACACTTGGAGCTCCCAAGGTGAATGAAGATTATGGAGATACCGTTCCTTCAAGGCCTCTAGGGGCAAATGAAGTGACAGGCAGCACATTGACGAAGCAGCACATGTCTGGTATTGGGGAGCATGCAGAGGAAGGTAATTTTGGCACCGTAATAATTCATGGTGGAGATGAAAGAGATGAGACTGGTACTCGGACACAAATTTTTAATTCCAAAGAAGATCCACCTGCCTCTGGACTAGGCCCTTCCACTGCTGGTACAGTAGGTAAATCAAGCGAAGTCAGGGTGGGAGACGAAAATAACACCTCGGTTGGAGCACGAAATACAGTTACACAGACCAAACCAGCATTTTCTCTTTCAACCTTTACCTCTTCTGAGCCGAACTTGAGAAAATGCAAATCTCAACCACAGGTTGGAAGTCAAAGCGGTGGCACAGTGAAGAATGAAACTTTCAGCCGGAAAGCTTTTGCAGTGCAAGATAAGCTTTGGTCCATATATGCAGCTGGTAATACAGTGCCTATTCCATTTTTGAGGGCAACAGATATATCCCCCATTGCTCTCTTATCAGATAATGTTGTTGGAGGCATGCAACGAGATCATAGTGGAACTGGTGCTATAGATGCACTACAGGAGCTTTTTACTGGCGATGCACAGTCTAAAAAGGGACGAAGAGGGCAAAATGAGGTCAACTCTCTCTCTCTCTCATATATATATATATATATATATATATATATATATATATATATAACATGTTTGTTTTTTTTCCTGACATTTGGTGTGCTGCAGATGCCCCTTCCTCCAAGTGTTTACAAAAGACTCTTTGCAAGTCCAACTCTATTAAATCTCACACAAGCTTTAGCCTACCACAAGATGTGCTATGAAGATATGCCTCTCCAAGAATTGCAAGCAACGCAGGAACAACAGACTATTCAAAATCTTTGCGATACACTAAGAACCATTCTTCGATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006928 GO:0006950 GO:0006996 GO:0007010 GO:0007154 GO:0007165 GO:0007264 GO:0007265 GO:0007266 GO:0007346 GO:0008150 GO:0008152 GO:0008219 GO:0008283 GO:0009893 GO:0009966 GO:0009987 GO:0010562 GO:0010604 GO:0010646 GO:0012501 GO:0016043 GO:0016301 GO:0016310 GO:0016477 GO:0016740 GO:0016772 GO:0016773 GO:0017016 GO:0017048 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0023014 GO:0023051 GO:0023052 GO:0030029 GO:0030036 GO:0031098 GO:0031267 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0040011 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043408 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048365 GO:0048518 GO:0048522 GO:0048583 GO:0048870 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051020 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051674 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:1901564 GO:1902531
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

843

Amino Acids

92.79

Weight (kDa)

5.37

Isoelectric Point (pI)

47.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 191 - 482 2.5e-67 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 193 - 401 2.2e-45 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 264 - 342 1.5e-06 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 618
AarI CACCTGC 1 cut(s) 1795
Acc36I ACCTGC 1 cut(s) 1795
AccB1I GGYRCC 5 cut(s) 14, 170, 221, 1477, 1706
AccB7I CCANNNNNTGG 1 cut(s) 1973
AccII CGCG 2 cut(s) 123, 293
AclWI GGATC 3 cut(s) 12, 551, 1775
AcoI YGGCCR 2 cut(s) 522, 1335
AcsI RAATTY 2 cut(s) 1439, 1761
AcvI CACGTG 1 cut(s) 272
AcyI GRCGYC 2 cut(s) 171, 437
AfaI GTAC 5 cut(s) 146, 572, 755, 1750, 1819
AfiI CCNNNNNNNGG 7 cut(s) 24, 261, 292, 447, 1350, 1793, 1973
AflIII ACRYGT 2 cut(s) 1665, 2309
AgsI TTSAA 8 cut(s) 895, 925, 1139, 1319, 1432, 1614, 1920, 2492
AjnI CCWGG 3 cut(s) 129, 257, 1496
AjuI GAANNNNNNNTTGG 2 cut(s) 1686, 1718
AloI GAACNNNNNNTCC 2 cut(s) 1590, 1622
Alw21I GWGCWC 2 cut(s) 1576, 1879
Alw26I GTCTC 5 cut(s) 105, 1345, 1359, 1736, 1845
AlwI GGATC 3 cut(s) 12, 551, 1775
AoxI GGCC 7 cut(s) 344, 522, 898, 1335, 1494, 1616, 1801
ApeKI GCWGC 8 cut(s) 721, 724, 1004, 1418, 1644, 1660, 2060, 2341
ApoI RAATTY 2 cut(s) 1439, 1761
Asp700I GAANNNNTTC 1 cut(s) 1077
AspLEI GCGC 3 cut(s) 123, 173, 1035
AsuC2I CCSGG 1 cut(s) 373
AsuHPI GGTGA 6 cut(s) 320, 391, 538, 719, 1001, 1594
AvaII GGWCC 9 cut(s) 27, 252, 387, 928, 1020, 1242, 1463, 1509, 2049
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 5 cut(s) 14, 170, 221, 1477, 1706
BanII GRGCYC 2 cut(s) 1120, 1576
BbrPI CACGTG 1 cut(s) 272
BbsI GAAGAC 1 cut(s) 1563
Bbv12I GWGCWC 2 cut(s) 1576, 1879
BbvCI CCTCAGC 1 cut(s) 1146
BbvI GCAGC 8 cut(s) 708, 736, 1016, 1430, 1656, 1672, 2072, 2328
BccI CCATC 4 cut(s) 445, 790, 1057, 1091
BceAI ACGGC 5 cut(s) 94, 223, 270, 328, 1322
BcgI CGANNNNNNTGC 2 cut(s) 211, 245
BciT130I CCWGG 3 cut(s) 131, 259, 1498
BcnI CCSGG 1 cut(s) 373
BcoDI GTCTC 5 cut(s) 105, 1345, 1359, 1736, 1845
BfaI CTAG 3 cut(s) 624, 1622, 1799
BfmI CTRYAG 5 cut(s) 722, 1416, 2175, 2186, 2342
BfoI RGCGCY 1 cut(s) 174
BfuAI ACCTGC 1 cut(s) 1795
BglI GCCNNNNNGGC 1 cut(s) 296
BglII AGATCT 1 cut(s) 1163
Bme1390I CCNGG 4 cut(s) 131, 259, 373, 1498
Bme18I GGWCC 9 cut(s) 27, 252, 387, 928, 1020, 1242, 1463, 1509, 2049
BmrFI CCNGG 4 cut(s) 131, 259, 373, 1498
BmrI ACTGGG 1 cut(s) 286
BmsI GCATC 9 cut(s) 310, 708, 838, 1183, 1209, 1300, 2170, 2197, 2337
BmuI ACTGGG 1 cut(s) 286
BpiI GAAGAC 1 cut(s) 1563
BplI GAGNNNNNCTC 2 cut(s) 2234, 2266
BpmI CTGGAG 2 cut(s) 1053, 1527
Bpu10I CCTNAGC 1 cut(s) 1146
BpuEI CTTGAG 4 cut(s) 660, 1226, 1244, 1966
BpuMI CCSGG 1 cut(s) 373
BsaAI YACGTR 1 cut(s) 272
BsaHI GRCGYC 2 cut(s) 171, 437
BsaI GGTCTC 2 cut(s) 105, 1359
BsaJI CCNNGG 8 cut(s) 76, 291, 769, 843, 1400, 1481, 1578, 1866
BsaWI WCCGGW 1 cut(s) 535
BsaXI ACNNNNNCTCC 6 cut(s) 44, 74, 674, 704, 1590, 1620
Bsc4I CCNNNNNNNGG 7 cut(s) 24, 261, 292, 447, 1350, 1793, 1973
Bse118I RCCGGY 2 cut(s) 11, 114
Bse1I ACTGG 5 cut(s) 281, 525, 1750, 2173, 2206
Bse3DI GCAATG 3 cut(s) 734, 1479, 2112
BseBI CCWGG 3 cut(s) 131, 259, 1498
BseDI CCNNGG 8 cut(s) 76, 291, 769, 843, 1400, 1481, 1578, 1866
BseGI GGATG 7 cut(s) 456, 736, 853, 1068, 1114, 1174, 1321
BseLI CCNNNNNNNGG 7 cut(s) 24, 261, 292, 447, 1350, 1793, 1973
BseMI GCAATG 3 cut(s) 734, 1479, 2112
BseMII CTCAG 4 cut(s) 1137, 1320, 1413, 1926
BseNI ACTGG 5 cut(s) 281, 525, 1750, 2173, 2206
BseRI GAGGAG 3 cut(s) 397, 509, 872
BseXI GCAGC 8 cut(s) 708, 736, 1016, 1430, 1656, 1672, 2072, 2328
Bsh1236I CGCG 2 cut(s) 123, 293
Bsh1285I CGRYCG 2 cut(s) 12, 244
BshFI GGCC 7 cut(s) 346, 524, 900, 1337, 1496, 1618, 1803
BshNI GGYRCC 5 cut(s) 14, 170, 221, 1477, 1706
BsiEI CGRYCG 2 cut(s) 12, 244
BsiHKAI GWGCWC 2 cut(s) 1576, 1879
BsiSI CCGG 7 cut(s) 12, 25, 115, 372, 441, 536, 2017
BsiWI CGTACG 1 cut(s) 144
BslFI GGGAC 6 cut(s) 388, 641, 1063, 1164, 1449, 2238
BslI CCNNNNNNNGG 7 cut(s) 24, 261, 292, 447, 1350, 1793, 1973
BsmAI GTCTC 5 cut(s) 105, 1345, 1359, 1736, 1845
BsmBI CGTCTC 2 cut(s) 1345, 1845
BsmFI GGGAC 6 cut(s) 388, 641, 1063, 1164, 1449, 2238
BsnI GGCC 7 cut(s) 346, 524, 900, 1337, 1496, 1618, 1803
Bso31I GGTCTC 2 cut(s) 105, 1359
Bsp1286I GDGCHC 3 cut(s) 1120, 1576, 1879
Bsp143I GATC 7 cut(s) 4, 228, 556, 1163, 1266, 1780, 2155
BspANI GGCC 7 cut(s) 346, 524, 900, 1337, 1496, 1618, 1803
BspCNI CTCAG 4 cut(s) 1138, 1319, 1414, 1927
BspFNI CGCG 2 cut(s) 123, 293
BspHI TCATGA 2 cut(s) 1194, 1366
BspMAI CTGCAG 3 cut(s) 726, 1420, 2346
BspMI ACCTGC 1 cut(s) 1795
BspPI GGATC 3 cut(s) 12, 551, 1775
BspQI GCTCTTC 1 cut(s) 461
BspT107I GGYRCC 5 cut(s) 14, 170, 221, 1477, 1706
BspTNI GGTCTC 2 cut(s) 105, 1359
BsrDI GCAATG 3 cut(s) 734, 1479, 2112
BsrFI RCCGGY 2 cut(s) 11, 114
BsrI ACTGG 5 cut(s) 281, 525, 1750, 2173, 2206
BssAI RCCGGY 2 cut(s) 11, 114
BssECI CCNNGG 8 cut(s) 76, 291, 769, 843, 1400, 1481, 1578, 1866
BssMI GATC 7 cut(s) 4, 228, 556, 1163, 1266, 1780, 2155
BssNI GRCGYC 2 cut(s) 171, 437
BssT1I CCWWGG 3 cut(s) 769, 1481, 1578
Bst2UI CCWGG 3 cut(s) 131, 259, 1498
Bst6I CTCTTC 5 cut(s) 461, 690, 771, 1936, 2224
BstACI GRCGYC 2 cut(s) 171, 437
BstBAI YACGTR 1 cut(s) 272
BstC8I GCNNGC 7 cut(s) 435, 502, 1212, 1527, 1686, 2147, 2466
BstDEI CTNAG 5 cut(s) 1146, 1306, 1422, 1935, 2510
BstDSI CCRYGG 2 cut(s) 76, 291
BstENI CCTNNNNNAGG 1 cut(s) 1348
BstF5I GGATG 7 cut(s) 456, 736, 853, 1068, 1114, 1174, 1321
BstFNI CGCG 2 cut(s) 123, 293
BstH2I RGCGCY 1 cut(s) 174
BstHHI GCGC 3 cut(s) 123, 173, 1035
BstKTI GATC 7 cut(s) 7, 231, 559, 1166, 1269, 1783, 2158
BstMAI GTCTC 5 cut(s) 105, 1345, 1359, 1736, 1845
BstMBI GATC 7 cut(s) 4, 228, 556, 1163, 1266, 1780, 2155
BstMCI CGRYCG 2 cut(s) 12, 244
BstNI CCWGG 3 cut(s) 131, 259, 1498
BstNSI RCATGY 4 cut(s) 1669, 1688, 2149, 2313
BstSCI CCNGG 4 cut(s) 129, 257, 371, 1496
BstSFI CTRYAG 5 cut(s) 722, 1416, 2175, 2186, 2342
BstUI CGCG 2 cut(s) 123, 293
BstV1I GCAGC 8 cut(s) 708, 736, 1016, 1430, 1656, 1672, 2072, 2328
BstV2I GAAGAC 1 cut(s) 1563
BstX2I RGATCY 4 cut(s) 4, 556, 1163, 1780
BstYI RGATCY 4 cut(s) 4, 556, 1163, 1780
BsuRI GGCC 7 cut(s) 346, 524, 900, 1337, 1496, 1618, 1803
BtgI CCRYGG 2 cut(s) 76, 291
BtgZI GCGATG 1 cut(s) 2220
BtsCI GGATG 7 cut(s) 456, 736, 853, 1068, 1114, 1174, 1321
BtsI GCAGTG 3 cut(s) 478, 1809, 2037
BtsIMutI CAGTG 5 cut(s) 478, 1809, 2001, 2037, 2079
BveI ACCTGC 1 cut(s) 1795
Cac8I GCNNGC 7 cut(s) 435, 502, 1212, 1527, 1686, 2147, 2466
CciI TCATGA 2 cut(s) 1194, 1366
CfoI GCGC 3 cut(s) 123, 173, 1035
Cfr10I RCCGGY 2 cut(s) 11, 114
Cfr42I CCGCGG 1 cut(s) 294
CseI GACGC 2 cut(s) 426, 532
Csp6I GTAC 5 cut(s) 145, 571, 754, 1749, 1818
CviAII CATG 9 cut(s) 1024, 1195, 1302, 1367, 1666, 1685, 1721, 2146, 2310
CviQI GTAC 5 cut(s) 145, 571, 754, 1749, 1818
DdeI CTNAG 5 cut(s) 1146, 1306, 1422, 1935, 2510
DinI GGCGCC 1 cut(s) 172
DpnI GATC 7 cut(s) 6, 230, 558, 1165, 1268, 1782, 2157
DpnII GATC 7 cut(s) 4, 228, 556, 1163, 1266, 1780, 2155
EaeI YGGCCR 2 cut(s) 522, 1335
Eam1104I CTCTTC 5 cut(s) 461, 690, 771, 1936, 2224
EarI CTCTTC 5 cut(s) 461, 690, 771, 1936, 2224
EciI GGCGGA 2 cut(s) 314, 330
Ecl136II GAGCTC 1 cut(s) 1574
Eco130I CCWWGG 3 cut(s) 769, 1481, 1578
Eco147I AGGCCT 1 cut(s) 1618
Eco24I GRGCYC 2 cut(s) 1120, 1576
Eco31I GGTCTC 2 cut(s) 105, 1359
Eco32I GATATC 1 cut(s) 1200
Eco47I GGWCC 9 cut(s) 27, 252, 387, 928, 1020, 1242, 1463, 1509, 2049
Eco53kI GAGCTC 1 cut(s) 1574
Eco72I CACGTG 1 cut(s) 272
EcoICRI GAGCTC 1 cut(s) 1574
EcoNI CCTNNNNNAGG 1 cut(s) 1348
EcoO109I RGGNCCY 3 cut(s) 898, 1509, 1802
EcoRII CCWGG 3 cut(s) 129, 257, 1496
EcoRV GATATC 1 cut(s) 1200
EcoT14I CCWWGG 3 cut(s) 769, 1481, 1578
EcoT38I GRGCYC 2 cut(s) 1120, 1576
EgeI GGCGCC 1 cut(s) 172
EheI GGCGCC 1 cut(s) 172
ErhI CCWWGG 3 cut(s) 769, 1481, 1578
Esp3I CGTCTC 2 cut(s) 1345, 1845
FaeI CATG 9 cut(s) 1027, 1198, 1305, 1370, 1669, 1688, 1724, 2149, 2313
FalI AAGNNNNNCTT 4 cut(s) 768, 800, 2028, 2060
FaqI GGGAC 6 cut(s) 388, 641, 1063, 1164, 1449, 2238
FatI CATG 9 cut(s) 1023, 1194, 1301, 1366, 1665, 1684, 1720, 2145, 2309
FauI CCCGC 1 cut(s) 48
FokI GGATG 7 cut(s) 463, 723, 860, 1075, 1121, 1161, 1308
FriOI GRGCYC 2 cut(s) 1120, 1576
FspBI CTAG 3 cut(s) 624, 1622, 1799
GlaI GCGC 3 cut(s) 122, 172, 1034
GsuI CTGGAG 2 cut(s) 1053, 1527
HaeII RGCGCY 1 cut(s) 174
HaeIII GGCC 7 cut(s) 346, 524, 900, 1337, 1496, 1618, 1803
HapII CCGG 7 cut(s) 12, 25, 115, 372, 441, 536, 2017
HgaI GACGC 2 cut(s) 426, 532
HhaI GCGC 3 cut(s) 123, 173, 1035
Hin1I GRCGYC 2 cut(s) 171, 437
Hin1II CATG 9 cut(s) 1027, 1198, 1305, 1370, 1669, 1688, 1724, 2149, 2313
Hin6I GCGC 3 cut(s) 121, 171, 1033
HinP1I GCGC 3 cut(s) 121, 171, 1033
HincII GTYRAC 2 cut(s) 963, 2248
HindII GTYRAC 2 cut(s) 963, 2248
HindIII AAGCTT 3 cut(s) 2022, 2042, 2412
HinfI GANTC 5 cut(s) 89, 101, 359, 1051, 2376
HpaI GTTAAC 1 cut(s) 963
HpaII CCGG 7 cut(s) 12, 25, 115, 372, 441, 536, 2017
HphI GGTGA 6 cut(s) 320, 391, 538, 719, 1001, 1594
Hpy166II GTNNAC 5 cut(s) 76, 931, 963, 2248, 2368
Hpy8I GTNNAC 5 cut(s) 76, 931, 963, 2248, 2368
Hpy99I CGWCG 7 cut(s) 86, 194, 197, 334, 367, 449, 487
HpyAV CCTTC 8 cut(s) 589, 680, 889, 1486, 1620, 1688, 1815, 2363
HpyCH4IV ACGT 3 cut(s) 271, 332, 1040
HpyF3I CTNAG 5 cut(s) 1146, 1306, 1422, 1935, 2510
HpySE526I ACGT 3 cut(s) 271, 332, 1040
Hsp92I GRCGYC 2 cut(s) 171, 437
Hsp92II CATG 9 cut(s) 1027, 1198, 1305, 1370, 1669, 1688, 1724, 2149, 2313
HspAI GCGC 3 cut(s) 121, 171, 1033
KasI GGCGCC 1 cut(s) 170
KspAI GTTAAC 1 cut(s) 963
KspI CCGCGG 1 cut(s) 294
Kzo9I GATC 7 cut(s) 4, 228, 556, 1163, 1266, 1780, 2155
LguI GCTCTTC 1 cut(s) 461
Lsp1109I GCAGC 8 cut(s) 708, 736, 1016, 1430, 1656, 1672, 2072, 2328
LweI GCATC 9 cut(s) 310, 708, 838, 1183, 1209, 1300, 2170, 2197, 2337
MaeI CTAG 3 cut(s) 624, 1622, 1799
MaeII ACGT 3 cut(s) 271, 332, 1040
MaeIII GTNAC 8 cut(s) 267, 272, 308, 544, 838, 989, 1636, 1888
MalI GATC 7 cut(s) 6, 230, 558, 1165, 1268, 1782, 2157
MboI GATC 7 cut(s) 4, 228, 556, 1163, 1266, 1780, 2155
MfeI CAATTG 1 cut(s) 1134
MflI RGATCY 4 cut(s) 4, 556, 1163, 1780
MhlI GDGCHC 3 cut(s) 1120, 1576, 1879
Mly113I GGCGCC 1 cut(s) 171
MlyI GAGTC 3 cut(s) 368, 1045, 2370
MmeI TCCRAC 7 cut(s) 32, 129, 584, 1852, 1954, 2119, 2414
MroXI GAANNNNTTC 1 cut(s) 1077
MseI TTAA 7 cut(s) 632, 657, 830, 942, 962, 1767, 2399
MslI CAYNNNNRTG 1 cut(s) 741
MspA1I CMGCKG 4 cut(s) 293, 393, 1421, 2063
MspI CCGG 7 cut(s) 12, 25, 115, 372, 441, 536, 2017
MspR9I CCNGG 4 cut(s) 131, 259, 373, 1498
MunI CAATTG 1 cut(s) 1134
MvaI CCWGG 3 cut(s) 131, 259, 1498
MvnI CGCG 2 cut(s) 123, 293
NarI GGCGCC 1 cut(s) 171
NciI CCSGG 1 cut(s) 373
NdeII GATC 7 cut(s) 4, 228, 556, 1163, 1266, 1780, 2155
NlaIII CATG 9 cut(s) 1027, 1198, 1305, 1370, 1669, 1688, 1724, 2149, 2313
NmeAIII GCCGAG 2 cut(s) 372, 1381
NmuCI GTSAC 6 cut(s) 267, 272, 308, 544, 989, 1636
NspI RCATGY 4 cut(s) 1669, 1688, 2149, 2313
PaeI GCATGC 2 cut(s) 1688, 2149
PagI TCATGA 2 cut(s) 1194, 1366
PaqCI CACCTGC 1 cut(s) 1795
PceI AGGCCT 1 cut(s) 1618
PciI ACATGT 2 cut(s) 1665, 2309
PciSI GCTCTTC 1 cut(s) 461
PcsI WCGNNNNNNNCGW 5 cut(s) 28, 78, 153, 198, 237
PdmI GAANNNNTTC 1 cut(s) 1077
PfeI GAWTC 2 cut(s) 89, 101
Pfl23II CGTACG 1 cut(s) 144
PflFI GACNNNGTC 1 cut(s) 1024
PflMI CCANNNNNTGG 1 cut(s) 1973
PleI GAGTC 3 cut(s) 367, 1045, 2370
PluTI GGCGCC 1 cut(s) 174
PmaCI CACGTG 1 cut(s) 272
PmlI CACGTG 1 cut(s) 272
PpsI GAGTC 3 cut(s) 367, 1045, 2370
Ppu21I YACGTR 1 cut(s) 272
PpuMI RGGWCCY 1 cut(s) 1509
PscI ACATGT 2 cut(s) 1665, 2309
PsiI TTATAA 1 cut(s) 618
Psp124BI GAGCTC 1 cut(s) 1576
Psp5II RGGWCCY 1 cut(s) 1509
Psp6I CCWGG 3 cut(s) 129, 257, 1496
PspCI CACGTG 1 cut(s) 272
PspGI CCWGG 3 cut(s) 129, 257, 1496
PspLI CGTACG 1 cut(s) 144
PspPPI RGGWCCY 1 cut(s) 1509
PsrI GAACNNNNNNTAC 2 cut(s) 1389, 1421
PstI CTGCAG 3 cut(s) 726, 1420, 2346
PsuI RGATCY 4 cut(s) 4, 556, 1163, 1780
PsyI GACNNNGTC 1 cut(s) 1024
PvuII CAGCTG 2 cut(s) 1421, 2063
RsaI GTAC 5 cut(s) 146, 572, 755, 1750, 1819
RsaNI GTAC 5 cut(s) 145, 571, 754, 1749, 1818
RseI CAYNNNNRTG 1 cut(s) 741
SacI GAGCTC 1 cut(s) 1576
SacII CCGCGG 1 cut(s) 294
SapI GCTCTTC 1 cut(s) 461
SaqAI TTAA 7 cut(s) 632, 657, 830, 942, 962, 1767, 2399
Sau3AI GATC 7 cut(s) 4, 228, 556, 1163, 1266, 1780, 2155
SchI GAGTC 3 cut(s) 368, 1045, 2370
ScrFI CCNGG 4 cut(s) 131, 259, 373, 1498
SduI GDGCHC 3 cut(s) 1120, 1576, 1879
SfaNI GCATC 9 cut(s) 310, 708, 838, 1183, 1209, 1300, 2170, 2197, 2337
SfcI CTRYAG 5 cut(s) 722, 1416, 2175, 2186, 2342
SfoI GGCGCC 1 cut(s) 172
Sfr303I CCGCGG 1 cut(s) 294
SgrBI CCGCGG 1 cut(s) 294
SinI GGWCC 9 cut(s) 27, 252, 387, 928, 1020, 1242, 1463, 1509, 2049
SmiMI CAYNNNNRTG 1 cut(s) 741
SmlI CTYRAG 4 cut(s) 675, 1205, 1223, 1945
SmoI CTYRAG 4 cut(s) 675, 1205, 1223, 1945
SphI GCATGC 2 cut(s) 1688, 2149
SseBI AGGCCT 1 cut(s) 1618
SspDI GGCGCC 1 cut(s) 170
SspI AATATT 1 cut(s) 955
SspMI CTAG 3 cut(s) 624, 1622, 1799
SstI GAGCTC 1 cut(s) 1576
StuI AGGCCT 1 cut(s) 1618
StyD4I CCNGG 4 cut(s) 129, 257, 371, 1496
StyI CCWWGG 3 cut(s) 769, 1481, 1578
TaiI ACGT 3 cut(s) 274, 335, 1043
TaqI TCGA 6 cut(s) 156, 189, 329, 714, 1446, 2524
TfiI GAWTC 2 cut(s) 89, 101
Tru1I TTAA 7 cut(s) 632, 657, 830, 942, 962, 1767, 2399
Tru9I TTAA 7 cut(s) 632, 657, 830, 942, 962, 1767, 2399
TscAI CASTG 5 cut(s) 478, 1816, 2001, 2037, 2079
TseFI GTSAC 6 cut(s) 267, 272, 308, 544, 989, 1636
TseI GCWGC 8 cut(s) 721, 724, 1004, 1418, 1644, 1660, 2060, 2341
Tsp45I GTSAC 6 cut(s) 267, 272, 308, 544, 989, 1636
TspGWI ACGGA 1 cut(s) 1234
TspRI CASTG 5 cut(s) 478, 1816, 2001, 2037, 2079
Tth111I GACNNNGTC 1 cut(s) 1024
Van91I CCANNNNNTGG 1 cut(s) 1973
VpaK11BI GGWCC 9 cut(s) 27, 252, 387, 928, 1020, 1242, 1463, 1509, 2049
XagI CCTNNNNNAGG 1 cut(s) 1348
XapI RAATTY 2 cut(s) 1439, 1761
XceI RCATGY 4 cut(s) 1669, 1688, 2149, 2313
XmnI GAANNNNTTC 1 cut(s) 1077
XspI CTAG 3 cut(s) 624, 1622, 1799
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.