Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0004713

Physical Location & Seq

Genomic Coordinates Reverse (-)

62531306 .. 62536370

Gene Structure 5065 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00382680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

ATGGTAGCCTCATCAACCTCATCTCTGGGTTTCGACTCGTATTTTGAACCCAATACCAGTGATCAAGTATACTCCAACAACCTGAGAATAGGCCACTTTATAAAATCTGGGGACTGGAATAATGCGCTCAACGTGTTCGATGAAATGCCTCAGTATGATGTTGTGACATATAACTTGCTTATTTCAGGGCATGGCCGATTTGGGCATCGAGAACAGGCTTTTCGGCTCTATACTGATATGGTTTTACAAGGAATTAGAGAAAGTGCGTCGACGTTTTCTTCTGTGTTGGGGACTTGTACTGATGCAGGGCTTTATAGAGAAGGGGTTCAAGTTCATTGCAGGGCGGTGTCTCTTGGGTTTAGCTTGAATATGTTTGTCGGGAGCTCGTTGGTGGACCTTTACTTGCATATGGGGCAAGACAATGTAGCTGTGAAGTTGTTTGATGAGTTGCAGGAGAGAAACTTGGCTGTATGGAATTTGTTGTTACGTGGGTTTTGTGAACTAGGTCGAGTGGATGAGCTGTTTGGGATGTATTATAGGATCCAGTTGGATGGTGTGGATCCAAATGGGCTTAGTTATTGTTATTGGATACGTGCATGCAGTAATGGGAAGCTTTTGGATGAAGGAAAGCAGCTGCATTGTGGTGTTGTGAAGGAGGGATGGTTGGAATCGAATGTGTTTGTTGCCAATGCTCTGGTCGATTTATACTCTGCTTGTGGGAGTTTGATTGATGCAAGAGAAGCATTTGAAGCTATTCCAGTGGAGGATGTGATTTCGTGGAATTCGATTATTTGGGTCTATACCGAAAATGGTTTGCTGCTTGATGCTCTTGAGTTATTTGCTAGGATGCAGTTTTGGGGGAAGAGGCCATCCATCCGTTCATTTGTTGGGTTTTTGAATTTGGCTAGTAGGATTCGGAATACTCAACTTGGGAAGCAGATACACTCTTGTGTTGTGAAATCGGGTTTTGATCATGATGCGAGTTTTCATGTTCAATCTGCTCTGATAGATATGTATGGGAAATGCAGTGACATTGAGAGTTCAGTGTGCATATATGAAAATGGTCGTGATAGAAATTTGGAGTGTTGCAACTCATTAATGACATCTTTGCTGCACTGTGGCGTTATTGAGGATGTGGTGGAGATGTTTGGTTTGATGGTTGATGAGGGAATTGGTCTTGATGAAGTTACTCTTTCTACGACACTAAAAGCTTTATCAGTATCTGCTTTTGCAAGTTTAGGCAGCTGCAAATTGCTGCACTGTTGTGCAGTAAAGTCAGGTTTTGAATCTGATATTGCTGTTTCGTGTTCACTAATCGAAGCATATGCAAGATGTGGTCATGTCAAGCTTTCCTGCCAGGTTTTTGATGAACTCCCTTCACCAAATGTCATCTGTTTTACATCGATTATCCATGGACATGCCCGAAATGGAATGGGAGGTGAATGTCTTCATTTGCTACAGGAAATGATGGCAAAGGGTTTGAAACCTGATAAAGTGACATTGTTGTGCGTGTTAAGTGGTTGCAACCATTCAGGTCTGGTTGAAGAAGCAAAATTGTTGTTTGATTCAATGGAAATGCTATATGGGGTCTCCCCAGACCGAAAGCATTATTCATGCATGGTTGATCTTTTAGGAAGGGCAGGTTTGCTACATGAAGCTGAAGAGTTGCTGCAACACGCACCCGGAAAAGGTGACTATGTAATGTGGAGCTCATTGTTGCGAAGTTGTAGGGTGCACAAGAATGAAATAGTGGGAAGGCAAACAGTAAAAAGTTTATTGGAGCTTGAGGGAAAGGACCCTGCAATTTTGTTGCAAGCTTCAAACTTCTATTCTGAAATTGGTGAGTTTGACACTGCAATGCAAATCCGAGAACTTGCAATAGCACAGCAAGTAACAAGGGACATAGGTCACAGCCTGGTTGAGGTAAACAGCCACAGTCACCGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_28 PPR PPR_2

Protein Analysis

648

Amino Acids

71.9

Weight (kDa)

5.31

Isoelectric Point (pI)

34.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	53 - 99	3.7e-09	PPR repeat family
PPR_2	PF13041	256 - 297	3.5e-06	PPR repeat family
PPR_2	PF13041	461 - 508	1.6e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004713)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23450 AT1G23460 AT1G23460 AT1G70500
fragaria_vesca	FvH4_4g32840 FvH4_4g32840 FvH4_4g32850
malus_domestica	MD13G1094200.v1.1 MD16G1095500.v1.1
prunus_persica	Prupe.1G251100_v2.0.a1
pyrus_communis	pycom13g08210 pycom16g08140
rosa_chinensis	RchiOBHm_Chr4g0401991 RchiOBHm_Chr4g0441851 RchiOBHm_Chr4g0441861
rosa_laevigata	RLG00000006060
rosa_multiflora	Rmu_co8498447.1_g000001 Rmu_sc0008316.1_g000007 Rmu_sc0008316.1_g000008
rosa_roxburghii	Rroxscaffold_5G00382680
rosa_rugosa	Rorug04G0336700
rosa_samantha	Rh4AG388200 Rh4AG388300 Rh4BG401800 Rh4BG401900 Rh4CG416900 Rh4CG417000 Rh4DG395200 Rh4DG395300
rosa_wichuraiana	Rw4G033510 Rw4G033520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	101
Acc36I	ACCTGC	1 cut(s)	1631
AccI	GTMKAC	2 cut(s)	69, 269
AciI	CCGC	1 cut(s)	344
AclWI	GGATC	4 cut(s)	535, 548, 554, 567
AcoI	YGGCCR	1 cut(s)	193
AcsI	RAATTY	4 cut(s)	475, 781, 898, 1075
AcuI	CTGAAG	1 cut(s)	1680
AfaI	GTAC	1 cut(s)	298
AfiI	CCNNNNNNNGG	2 cut(s)	1688, 1921
AflIII	ACRYGT	1 cut(s)	132
AjnI	CCWGG	2 cut(s)	1356, 1914
AleI	CACNNNNGTG	2 cut(s)	948, 1263
Alw21I	GWGCWC	3 cut(s)	386, 1712, 1737
Alw26I	GTCTC	2 cut(s)	354, 1594
Alw44I	GTGCAC	1 cut(s)	1733
AlwI	GGATC	4 cut(s)	535, 548, 554, 567
AlwNI	CAGNNNCTG	1 cut(s)	1223
AoxI	GGCC	3 cut(s)	91, 193, 866
ApaLI	GTGCAC	1 cut(s)	1733
ApeKI	GCWGC	8 cut(s)	631, 634, 817, 1111, 1242, 1245, 1255, 1669
ApoI	RAATTY	4 cut(s)	475, 781, 898, 1075
ArsI	GACNNNNNNTTYG	2 cut(s)	26, 58
AseI	ATTAAT	1 cut(s)	1097
Asp700I	GAANNNNTTC	3 cut(s)	324, 753, 1446
AspLEI	GCGC	1 cut(s)	127
AspS9I	GGNCC	2 cut(s)	394, 1795
AsuC2I	CCSGG	1 cut(s)	1683
AsuHPI	GGTGA	5 cut(s)	1371, 1451, 1703, 1853, 1931
AvaII	GGWCC	2 cut(s)	394, 1795
BaeGI	GKGCMC	1 cut(s)	1737
BamHI	GGATCC	2 cut(s)	540, 559
BanII	GRGCYC	2 cut(s)	386, 1712
BbsI	GAAGAC	1 cut(s)	1439
Bbv12I	GWGCWC	3 cut(s)	386, 1712, 1737
BbvI	GCAGC	8 cut(s)	621, 643, 804, 1098, 1232, 1242, 1254, 1656
BccI	CCATC	6 cut(s)	545, 654, 877, 881, 1150, 1462
BcgI	CGANNNNNNTGC	2 cut(s)	1307, 1341
BciT130I	CCWGG	2 cut(s)	1358, 1916
BciVI	GTATCC	1 cut(s)	582
BclI	TGATCA	2 cut(s)	61, 970
BcnI	CCSGG	1 cut(s)	1683
BcoDI	GTCTC	2 cut(s)	354, 1594
BfaI	CTAG	3 cut(s)	503, 843, 906
BfmI	CTRYAG	1 cut(s)	1457
BfuAI	ACCTGC	1 cut(s)	1631
BfuI	GTATCC	1 cut(s)	582
BisI	GCNGC	8 cut(s)	632, 635, 818, 1112, 1243, 1246, 1256, 1670
BlsI	GCNGC	8 cut(s)	633, 636, 819, 1113, 1244, 1247, 1257, 1671
Bme1390I	CCNGG	3 cut(s)	1358, 1683, 1916
Bme18I	GGWCC	2 cut(s)	394, 1795
BmgT120I	GGNCC	2 cut(s)	394, 1795
BmiI	GGNNCC	3 cut(s)	542, 561, 1797
BmrFI	CCNGG	3 cut(s)	1358, 1683, 1916
BmsI	GCATC	6 cut(s)	214, 292, 721, 814, 837, 967
BoxI	GACNNNNGTC	1 cut(s)	1905
BpiI	GAAGAC	1 cut(s)	1439
BpuEI	CTTGAG	2 cut(s)	851, 1805
BpuMI	CCSGG	1 cut(s)	1683
Bsa29I	ATCGAT	1 cut(s)	1403
BsaAI	YACGTR	2 cut(s)	488, 593
BsaI	GGTCTC	1 cut(s)	1594
BsaJI	CCNNGG	1 cut(s)	1411
BsaXI	ACNNNNNCTCC	2 cut(s)	647, 677
Bsc4I	CCNNNNNNNGG	2 cut(s)	1688, 1921
Bse1I	ACTGG	4 cut(s)	57, 119, 544, 758
Bse3DI	GCAATG	2 cut(s)	334, 1863
BseBI	CCWGG	2 cut(s)	1358, 1916
BseCI	ATCGAT	1 cut(s)	1403
BseDI	CCNNGG	1 cut(s)	1411
BseLI	CCNNNNNNNGG	2 cut(s)	1688, 1921
BseMI	GCAATG	2 cut(s)	334, 1863
BseMII	CTCAG	2 cut(s)	74, 164
BseNI	ACTGG	4 cut(s)	57, 119, 544, 758
BseSI	GKGCMC	1 cut(s)	1737
BseXI	GCAGC	8 cut(s)	621, 643, 804, 1098, 1232, 1242, 1254, 1656
BsgI	GTGCAG	3 cut(s)	1097, 1241, 1287
BshFI	GGCC	3 cut(s)	93, 195, 868
BshVI	ATCGAT	1 cut(s)	1403
BsiHKAI	GWGCWC	3 cut(s)	386, 1712, 1737
BsiSI	CCGG	1 cut(s)	1683
BslFI	GGGAC	3 cut(s)	125, 304, 1913
BslI	CCNNNNNNNGG	2 cut(s)	1688, 1921
BsmAI	GTCTC	2 cut(s)	354, 1594
BsmFI	GGGAC	3 cut(s)	125, 304, 1913
BsnI	GGCC	3 cut(s)	93, 195, 868
Bso31I	GGTCTC	1 cut(s)	1594
Bsp1286I	GDGCHC	3 cut(s)	386, 1712, 1737
Bsp143I	GATC	5 cut(s)	61, 540, 559, 970, 1624
Bsp19I	CCATGG	1 cut(s)	1411
BspACI	CCGC	1 cut(s)	344
BspANI	GGCC	3 cut(s)	93, 195, 868
BspCNI	CTCAG	2 cut(s)	75, 163
BspDI	ATCGAT	1 cut(s)	1403
BspHI	TCATGA	1 cut(s)	973
BspLI	GGNNCC	3 cut(s)	542, 561, 1797
BspMI	ACCTGC	1 cut(s)	1631
BspPI	GGATC	4 cut(s)	535, 548, 554, 567
BspTNI	GGTCTC	1 cut(s)	1594
BsrDI	GCAATG	2 cut(s)	334, 1863
BsrI	ACTGG	4 cut(s)	57, 119, 544, 758
BssECI	CCNNGG	1 cut(s)	1411
BssMI	GATC	5 cut(s)	61, 540, 559, 970, 1624
BssNAI	GTATAC	1 cut(s)	70
BssT1I	CCWWGG	1 cut(s)	1411
Bst1107I	GTATAC	1 cut(s)	70
Bst2UI	CCWGG	2 cut(s)	1358, 1916
Bst4CI	ACNGT	5 cut(s)	1118, 1262, 1765, 1937, 1943
Bst6I	CTCTTC	2 cut(s)	857, 1656
BstBAI	YACGTR	2 cut(s)	488, 593
BstC8I	GCNNGC	2 cut(s)	598, 1815
BstDEI	CTNAG	3 cut(s)	83, 150, 572
BstDSI	CCRYGG	1 cut(s)	1411
BstENI	CCTNNNNNAGG	1 cut(s)	1919
BstHHI	GCGC	1 cut(s)	127
BstKTI	GATC	5 cut(s)	64, 543, 562, 973, 1627
BstMAI	GTCTC	2 cut(s)	354, 1594
BstMBI	GATC	5 cut(s)	61, 540, 559, 970, 1624
BstMWI	GCNNNNNNNGC	3 cut(s)	412, 740, 749
BstNI	CCWGG	2 cut(s)	1358, 1916
BstNSI	RCATGY	2 cut(s)	600, 1421
BstPAI	GACNNNNGTC	1 cut(s)	1905
BstSCI	CCNGG	3 cut(s)	1356, 1681, 1914
BstSFI	CTRYAG	1 cut(s)	1457
BstSLI	GKGCMC	1 cut(s)	1737
BstV1I	GCAGC	8 cut(s)	621, 643, 804, 1098, 1232, 1242, 1254, 1656
BstV2I	GAAGAC	1 cut(s)	1439
BstX2I	RGATCY	2 cut(s)	540, 559
BstXI	CCANNNNNNTGG	2 cut(s)	551, 694
BstYI	RGATCY	2 cut(s)	540, 559
BstZ17I	GTATAC	1 cut(s)	70
Bsu15I	ATCGAT	1 cut(s)	1403
BsuI	GTATCC	1 cut(s)	582
BsuRI	GGCC	3 cut(s)	93, 195, 868
BsuTUI	ATCGAT	1 cut(s)	1403
BtgI	CCRYGG	1 cut(s)	1411
BtsI	GCAGTG	2 cut(s)	1033, 1851
BtsIMutI	CAGTG	7 cut(s)	64, 765, 1033, 1050, 1114, 1258, 1851
BveI	ACCTGC	1 cut(s)	1631
Cac8I	GCNNGC	2 cut(s)	598, 1815
CaiI	CAGNNNCTG	1 cut(s)	1223
CciI	TCATGA	1 cut(s)	973
CfoI	GCGC	1 cut(s)	127
Cfr13I	GGNCC	2 cut(s)	394, 1795
ClaI	ATCGAT	1 cut(s)	1403
CseI	GACGC	1 cut(s)	255
Csp6I	GTAC	1 cut(s)	297
CviQI	GTAC	1 cut(s)	297
DdeI	CTNAG	3 cut(s)	83, 150, 572
DpnI	GATC	5 cut(s)	63, 542, 561, 972, 1626
DpnII	GATC	5 cut(s)	61, 540, 559, 970, 1624
EaeI	YGGCCR	1 cut(s)	193
Eam1104I	CTCTTC	2 cut(s)	857, 1656
EarI	CTCTTC	2 cut(s)	857, 1656
Ecl136II	GAGCTC	2 cut(s)	384, 1710
Eco130I	CCWWGG	1 cut(s)	1411
Eco24I	GRGCYC	2 cut(s)	386, 1712
Eco31I	GGTCTC	1 cut(s)	1594
Eco47I	GGWCC	2 cut(s)	394, 1795
Eco53kI	GAGCTC	2 cut(s)	384, 1710
Eco57I	CTGAAG	1 cut(s)	1680
EcoICRI	GAGCTC	2 cut(s)	384, 1710
EcoNI	CCTNNNNNAGG	1 cut(s)	1919
EcoO109I	RGGNCCY	1 cut(s)	1795
EcoRI	GAATTC	1 cut(s)	781
EcoRII	CCWGG	2 cut(s)	1356, 1914
EcoT14I	CCWWGG	1 cut(s)	1411
EcoT22I	ATGCAT	1 cut(s)	1619
EcoT38I	GRGCYC	2 cut(s)	386, 1712
ErhI	CCWWGG	1 cut(s)	1411
FalI	AAGNNNNNCTT	2 cut(s)	1176, 1208
FaqI	GGGAC	3 cut(s)	125, 304, 1913
FauNDI	CATATG	2 cut(s)	408, 1324
FbaI	TGATCA	2 cut(s)	61, 970
FblI	GTMKAC	2 cut(s)	69, 269
Fnu4HI	GCNGC	8 cut(s)	632, 635, 818, 1112, 1243, 1246, 1256, 1670
FriOI	GRGCYC	2 cut(s)	386, 1712
Fsp4HI	GCNGC	8 cut(s)	632, 635, 818, 1112, 1243, 1246, 1256, 1670
FspBI	CTAG	3 cut(s)	503, 843, 906
GlaI	GCGC	1 cut(s)	126
GluI	GCNGC	8 cut(s)	632, 635, 818, 1112, 1243, 1246, 1256, 1670
HaeIII	GGCC	3 cut(s)	93, 195, 868
HapII	CCGG	1 cut(s)	1683
HgaI	GACGC	1 cut(s)	255
HhaI	GCGC	1 cut(s)	127
Hin6I	GCGC	1 cut(s)	125
HinP1I	GCGC	1 cut(s)	125
HincII	GTYRAC	1 cut(s)	270
HindII	GTYRAC	1 cut(s)	270
HindIII	AAGCTT	4 cut(s)	611, 1209, 1346, 1815
HinfI	GANTC	5 cut(s)	35, 668, 913, 1286, 1565
HpaII	CCGG	1 cut(s)	1683
HphI	GGTGA	5 cut(s)	1371, 1451, 1703, 1853, 1931
Hpy166II	GTNNAC	7 cut(s)	70, 270, 394, 500, 1310, 1735, 1927
Hpy188I	TCNGA	5 cut(s)	918, 1005, 1291, 1834, 1868
Hpy188III	TCNNGA	6 cut(s)	209, 379, 830, 974, 1067, 1178
Hpy8I	GTNNAC	7 cut(s)	70, 270, 394, 500, 1310, 1735, 1927
Hpy99I	CGWCG	2 cut(s)	271, 274
HpyAV	CCTTC	6 cut(s)	314, 617, 646, 1386, 1629, 1749
HpyCH4III	ACNGT	5 cut(s)	1118, 1262, 1765, 1937, 1943
HpyCH4IV	ACGT	4 cut(s)	132, 272, 487, 592
HpyF10VI	GCNNNNNNNGC	3 cut(s)	412, 740, 749
HpyF3I	CTNAG	3 cut(s)	83, 150, 572
HpySE526I	ACGT	4 cut(s)	132, 272, 487, 592
HspAI	GCGC	1 cut(s)	125
Ksp22I	TGATCA	2 cut(s)	61, 970
Kzo9I	GATC	5 cut(s)	61, 540, 559, 970, 1624
LmnI	GCTCC	3 cut(s)	381, 1707, 1780
Lsp1109I	GCAGC	8 cut(s)	621, 643, 804, 1098, 1232, 1242, 1254, 1656
LweI	GCATC	6 cut(s)	214, 292, 721, 814, 837, 967
MaeI	CTAG	3 cut(s)	503, 843, 906
MaeII	ACGT	4 cut(s)	132, 272, 487, 592
MaeIII	GTNAC	9 cut(s)	163, 483, 1028, 1186, 1495, 1691, 1891, 1907, 1937
MalI	GATC	5 cut(s)	63, 542, 561, 972, 1626
MboI	GATC	5 cut(s)	61, 540, 559, 970, 1624
MboII	GAAGA	5 cut(s)	270, 874, 1439, 1556, 1673
MflI	RGATCY	2 cut(s)	540, 559
MhlI	GDGCHC	3 cut(s)	386, 1712, 1737
MlyI	GAGTC	1 cut(s)	29
MmeI	TCCRAC	3 cut(s)	99, 528, 645
Mph1103I	ATGCAT	1 cut(s)	1619
MroXI	GAANNNNTTC	3 cut(s)	324, 753, 1446
MseI	TTAA	2 cut(s)	1097, 1514
MslI	CAYNNNNRTG	7 cut(s)	642, 948, 1263, 1416, 1504, 1740, 1856
MspA1I	CMGCKG	2 cut(s)	634, 1245
MspI	CCGG	1 cut(s)	1683
MspR9I	CCNGG	3 cut(s)	1358, 1683, 1916
MvaI	CCWGG	2 cut(s)	1358, 1916
MwoI	GCNNNNNNNGC	3 cut(s)	412, 740, 749
NciI	CCSGG	1 cut(s)	1683
NcoI	CCATGG	1 cut(s)	1411
NdeI	CATATG	2 cut(s)	408, 1324
NdeII	GATC	5 cut(s)	61, 540, 559, 970, 1624
NlaIV	GGNNCC	3 cut(s)	542, 561, 1797
NmuCI	GTSAC	6 cut(s)	163, 1028, 1495, 1691, 1907, 1937
NsiI	ATGCAT	1 cut(s)	1619
NspI	RCATGY	2 cut(s)	600, 1421
OliI	CACNNNNGTG	2 cut(s)	948, 1263
PaeI	GCATGC	1 cut(s)	600
PagI	TCATGA	1 cut(s)	973
PcsI	WCGNNNNNNNCGW	1 cut(s)	782
PdmI	GAANNNNTTC	3 cut(s)	324, 753, 1446
PfeI	GAWTC	4 cut(s)	668, 913, 1286, 1565
PkrI	GCNGC	8 cut(s)	633, 636, 819, 1113, 1244, 1247, 1257, 1671
PleI	GAGTC	1 cut(s)	29
PpsI	GAGTC	1 cut(s)	29
Ppu21I	YACGTR	2 cut(s)	488, 593
PpuMI	RGGWCCY	1 cut(s)	1795
PshAI	GACNNNNGTC	1 cut(s)	1905
PshBI	ATTAAT	1 cut(s)	1097
PsiI	TTATAA	1 cut(s)	101
Psp124BI	GAGCTC	2 cut(s)	386, 1712
Psp5II	RGGWCCY	1 cut(s)	1795
Psp6I	CCWGG	2 cut(s)	1356, 1914
PspGI	CCWGG	2 cut(s)	1356, 1914
PspN4I	GGNNCC	3 cut(s)	542, 561, 1797
PspPI	GGNCC	2 cut(s)	394, 1795
PspPPI	RGGWCCY	1 cut(s)	1795
PstNI	CAGNNNCTG	1 cut(s)	1223
PsuI	RGATCY	2 cut(s)	540, 559
PvuII	CAGCTG	2 cut(s)	634, 1245
RsaI	GTAC	1 cut(s)	298
RsaNI	GTAC	1 cut(s)	297
RseI	CAYNNNNRTG	7 cut(s)	642, 948, 1263, 1416, 1504, 1740, 1856
SacI	GAGCTC	2 cut(s)	386, 1712
SalI	GTCGAC	1 cut(s)	268
SaqAI	TTAA	2 cut(s)	1097, 1514
SatI	GCNGC	8 cut(s)	632, 635, 818, 1112, 1243, 1246, 1256, 1670
Sau3AI	GATC	5 cut(s)	61, 540, 559, 970, 1624
Sau96I	GGNCC	2 cut(s)	394, 1795
SchI	GAGTC	1 cut(s)	29
ScrFI	CCNGG	3 cut(s)	1358, 1683, 1916
SduI	GDGCHC	3 cut(s)	386, 1712, 1737
SfaNI	GCATC	6 cut(s)	214, 292, 721, 814, 837, 967
SfcI	CTRYAG	1 cut(s)	1457
SgrDI	CGTCGACG	1 cut(s)	268
SinI	GGWCC	2 cut(s)	394, 1795
SmiMI	CAYNNNNRTG	7 cut(s)	642, 948, 1263, 1416, 1504, 1740, 1856
SmlI	CTYRAG	2 cut(s)	830, 1784
SmoI	CTYRAG	2 cut(s)	830, 1784
SphI	GCATGC	1 cut(s)	600
SsiI	CCGC	1 cut(s)	344
SspMI	CTAG	3 cut(s)	503, 843, 906
SstI	GAGCTC	2 cut(s)	386, 1712
StyD4I	CCNGG	3 cut(s)	1356, 1681, 1914
StyI	CCWWGG	1 cut(s)	1411
TaaI	ACNGT	5 cut(s)	1118, 1262, 1765, 1937, 1943
TaiI	ACGT	4 cut(s)	135, 275, 490, 595
TaqII	GACCGA	1 cut(s)	1614
TatI	WGTACW	1 cut(s)	296
TfiI	GAWTC	4 cut(s)	668, 913, 1286, 1565
Tru1I	TTAA	2 cut(s)	1097, 1514
Tru9I	TTAA	2 cut(s)	1097, 1514
TscAI	CASTG	7 cut(s)	64, 765, 1033, 1050, 1121, 1265, 1858
TseFI	GTSAC	6 cut(s)	163, 1028, 1495, 1691, 1907, 1937
TseI	GCWGC	8 cut(s)	631, 634, 817, 1111, 1242, 1245, 1255, 1669
Tsp45I	GTSAC	6 cut(s)	163, 1028, 1495, 1691, 1907, 1937
TspGWI	ACGGA	1 cut(s)	866
TspRI	CASTG	7 cut(s)	64, 765, 1033, 1050, 1121, 1265, 1858
VneI	GTGCAC	1 cut(s)	1733
VpaK11BI	GGWCC	2 cut(s)	394, 1795
VspI	ATTAAT	1 cut(s)	1097
XagI	CCTNNNNNAGG	1 cut(s)	1919
XapI	RAATTY	4 cut(s)	475, 781, 898, 1075
XceI	RCATGY	2 cut(s)	600, 1421
XmiI	GTMKAC	2 cut(s)	69, 269
XmnI	GAANNNNTTC	3 cut(s)	324, 753, 1446
XspI	CTAG	3 cut(s)	503, 843, 906
Zsp2I	ATGCAT	1 cut(s)	1619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.