Rw4G033520

Pentatricopeptide repeat-containing protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Reverse (-)
60680489 .. 60682510
2022 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G033520.1

Sequence Viewer

Length: 2022 bp
ATGTTGATTTTACCGCGGAGAGCTCGATGGTCGTTTCGAGTTCTTCGATCATTGTCCTCCTCTGTTAGCATACCCATTGTAGCTTCATCAACCTCATCTCTGGGTTTCGACTCGTATTTTGAACCCAATACCAGTGACCAAGTATACTCCAACAACCGGAGAATAGGCCACTTTATAAAATCTGGGGACTTGAACAATGCACTCAATGTGTTCGATGAAATGCCTCAGTATGATGTTGTGACATATAACTTGCTTATTTCAGGGCATGGCCGATTTGGGCATCGAGAACAGGCTTTTCGGCTCTATACTGATATGGTTTCACAAGGAATTAGAGAAAGTGCGTCGACTTTTGCTTCTGTGTTGGGGACTTGTACTGATGCAGGGCTCTATAGAGAAGGGGTTCAAGTTCATTGCAGGGCGGTGTCTCTTGGGTTTAGCTTGAATATGTATGTGGGGAGCTCCCTGGTAGACCTTTACTTGCGTATGGGGCAAGACAATGTAGCTGTGAAGTTGTTTGATGAGTTGCAGGAGAGAAACTTGGCTGTATGGAATTTGTTGTTACGTGGGTTTTGTGAACTGGGTCGAGTGGATGAGCTGTTTGGGATGTATTATAGGATGAAGTTGGATGGTGTGGATCCAAATGGGCTTAGTTATTGTTATTGGATACGTGCATGTAGCAATGGGAAGCTTTTGGATGAAGGAAAGCAGCTGCATTGTGGTGTTGTGAAGGAGGGATGGTTGGAATCGAATGTGTTTGTTGCCAATGCTCTGGTGGATTTGTACTCTGCTTGTGGGAGTTTGATTGATGCAAGAGAAGCATTTGAAGCTATTCCAGTGGAGGATGTGATTTCGTGGAATTCGATTATTTGGGTCTATACCGAAAATGGTTTGCTGCTTGATGCTCTTGAGTTATTTGCTAGGATGCAGTTTTGGGGGAAGAGACCATCCATCCGTTCATTTGTTGGGTTTTTGAATTTGGCTAGTAGGATTCGGAATATTCAACTTGGGAAGCAGATACACTCTTATGTTGTGAAATCGGGTTTTGATCATGATGCGAGTTTTCATATTCAATCTGCTCTGATAGATATGTATGGGAAATGCAGTGACATTGAGAGTTCAGTGTTCATATATGAAAATGGTCGTGATAGAAATTTGGAGTGTTGCAACTCATTAATGACATCTTTGCTGCACTGTGGTGTTATTGAGGATGTGGTGGAGATGTTTGGTTTGATGGTTGATGAGGGAATTGGTCTTGATGAAGTTACTCTTTCTACGACACTAAAAGCTTTATCAGTATCTGCTTTTGCAAGTTTAGGCGGCTGCAAATTGCTTCATTGTTGTGCAGTAAAGTCAGGTTTTGAATCTGATATTGCTGTTTCATGTTCACAAATCGAAGCATATGCAAGATGTGGTCATGTCAAGCTTTCCTGCCAGGTTTTTGATGAACTCCCTTCACCAAATGTCATCTGTTTTACATCGATCATCCATGGATATGCCCGAAATGGAATGGGAGGTGAATGTCTTCATTTGCTACAGGAAATGGTGGCAAAGGGTTTGAAACCTGATAAAGTGACAGTGTTGTGCGTGTTAAGTGGTTGCAACCATTCAGGTCTGGTTGAAGAAGCAAAATTGTTGTTTGATTCAATGGAAATGCTATATGGGGTCTCCCCAGACCGAAAGCATTATTCATGCATGGTTGATCTTTTAGGCCGGGCAGGTTTGCTACATGAAGCTGAAGAGTTGCTGCAACACGCACCCGGAAAAGGTGACTATGTAATGTGGAGCTCATTGTTGCGAAGTTGTAGGGTGCACAAGAATGAGATAGTGGGACGGCGAACAGTAAAAAGTTTATTGGAGCTTGAGGGAAAGGACCCTGCAATTTTGTTGCAAGCTTCAAACTTCTATTCTGAAATCGGCGAGTTTGACACTGCAATGCAAATCCGAGAATTTGCAATAGCACAGCAAGTAACAAGGGACATAGGTCACAGCCTGGTTGAGGTAAACAGCCACAGTCACCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

673

Amino Acids

74.93

Weight (kDa)

5.69

Isoelectric Point (pI)

38.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 78 - 124 6.5e-09 PPR repeat family
PPR_2 PF13041 179 - 226 2.3e-07 PPR repeat family
PPR_2 PF13041 281 - 322 3.7e-06 PPR repeat family
PPR_2 PF13041 486 - 533 1.5e-10 PPR repeat family
PPR PF01535 490 - 519 4.8e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 176
Acc36I ACCTGC 1 cut(s) 1706
AccI GTMKAC 3 cut(s) 144, 344, 468
AccII CGCG 1 cut(s) 16
AciI CCGC 4 cut(s) 14, 16, 419, 1317
AclWI GGATC 2 cut(s) 629, 642
AcoI YGGCCR 1 cut(s) 268
AcsI RAATTY 5 cut(s) 550, 856, 973, 1150, 1946
AcuI CTGAAG 1 cut(s) 1755
AfaI GTAC 2 cut(s) 373, 782
AfiI CCNNNNNNNGG 3 cut(s) 156, 1763, 1996
AjnI CCWGG 3 cut(s) 462, 1431, 1989
AleI CACNNNNGTG 1 cut(s) 1194
Alw21I GWGCWC 4 cut(s) 25, 461, 1787, 1812
Alw26I GTCTC 3 cut(s) 429, 934, 1669
Alw44I GTGCAC 1 cut(s) 1808
AlwI GGATC 2 cut(s) 629, 642
AlwNI CAGNNNCTG 1 cut(s) 1298
AoxI GGCC 3 cut(s) 166, 268, 1708
ApaLI GTGCAC 1 cut(s) 1808
ApeKI GCWGC 6 cut(s) 706, 709, 892, 1186, 1320, 1744
ApoI RAATTY 5 cut(s) 550, 856, 973, 1150, 1946
ArsI GACNNNNNNTTYG 2 cut(s) 101, 133
AseI ATTAAT 1 cut(s) 1172
Asp700I GAANNNNTTC 3 cut(s) 399, 828, 1521
AspS9I GGNCC 1 cut(s) 1870
AsuC2I CCSGG 2 cut(s) 1712, 1758
AsuHPI GGTGA 4 cut(s) 1446, 1526, 1778, 2006
AvaII GGWCC 1 cut(s) 1870
BaeGI GKGCMC 1 cut(s) 1812
BamHI GGATCC 1 cut(s) 634
BanII GRGCYC 4 cut(s) 25, 387, 461, 1787
BbsI GAAGAC 1 cut(s) 1514
Bbv12I GWGCWC 4 cut(s) 25, 461, 1787, 1812
BbvI GCAGC 6 cut(s) 696, 718, 879, 1173, 1307, 1731
BccI CCATC 6 cut(s) 21, 620, 729, 952, 956, 1225
BceAI ACGGC 1 cut(s) 1847
BcgI CGANNNNNNTGC 2 cut(s) 1382, 1416
BciT130I CCWGG 3 cut(s) 464, 1433, 1991
BciVI GTATCC 1 cut(s) 657
BclI TGATCA 1 cut(s) 1045
BcnI CCSGG 2 cut(s) 1712, 1758
BcoDI GTCTC 3 cut(s) 429, 934, 1669
BfaI CTAG 2 cut(s) 918, 981
BfmI CTRYAG 2 cut(s) 388, 1532
BfuAI ACCTGC 1 cut(s) 1706
BfuI GTATCC 1 cut(s) 657
BisI GCNGC 7 cut(s) 707, 710, 893, 1187, 1318, 1321, 1745
BlsI GCNGC 7 cut(s) 708, 711, 894, 1188, 1319, 1322, 1746
Bme1390I CCNGG 5 cut(s) 464, 1433, 1712, 1758, 1991
Bme18I GGWCC 1 cut(s) 1870
BmgT120I GGNCC 1 cut(s) 1870
BmiI GGNNCC 2 cut(s) 636, 1872
BmrFI CCNGG 5 cut(s) 464, 1433, 1712, 1758, 1991
BmrI ACTGGG 1 cut(s) 587
BmsI GCATC 6 cut(s) 289, 367, 796, 889, 912, 1042
BmuI ACTGGG 1 cut(s) 587
BoxI GACNNNNGTC 1 cut(s) 1980
BpiI GAAGAC 1 cut(s) 1514
BpuEI CTTGAG 2 cut(s) 926, 1880
BpuMI CCSGG 2 cut(s) 1712, 1758
Bsa29I ATCGAT 1 cut(s) 1478
BsaAI YACGTR 2 cut(s) 563, 668
BsaI GGTCTC 2 cut(s) 934, 1669
BsaJI CCNNGG 3 cut(s) 14, 462, 1486
BsaWI WCCGGW 1 cut(s) 156
BsaXI ACNNNNNCTCC 2 cut(s) 722, 752
Bsc4I CCNNNNNNNGG 3 cut(s) 156, 1763, 1996
Bse1I ACTGG 3 cut(s) 132, 582, 833
Bse3DI GCAATG 3 cut(s) 409, 685, 1938
BseBI CCWGG 3 cut(s) 464, 1433, 1991
BseCI ATCGAT 1 cut(s) 1478
BseDI CCNNGG 3 cut(s) 14, 462, 1486
BseLI CCNNNNNNNGG 3 cut(s) 156, 1763, 1996
BseMI GCAATG 3 cut(s) 409, 685, 1938
BseMII CTCAG 1 cut(s) 239
BseNI ACTGG 3 cut(s) 132, 582, 833
BseRI GAGGAG 1 cut(s) 49
BseSI GKGCMC 1 cut(s) 1812
BseXI GCAGC 6 cut(s) 696, 718, 879, 1173, 1307, 1731
BsgI GTGCAG 2 cut(s) 1172, 1362
Bsh1236I CGCG 1 cut(s) 16
BshFI GGCC 3 cut(s) 168, 270, 1710
BshVI ATCGAT 1 cut(s) 1478
BsiHKAI GWGCWC 4 cut(s) 25, 461, 1787, 1812
BsiSI CCGG 3 cut(s) 157, 1711, 1758
BslFI GGGAC 4 cut(s) 200, 379, 1842, 1988
BslI CCNNNNNNNGG 3 cut(s) 156, 1763, 1996
BsmAI GTCTC 3 cut(s) 429, 934, 1669
BsmFI GGGAC 4 cut(s) 200, 379, 1842, 1988
BsnI GGCC 3 cut(s) 168, 270, 1710
Bso31I GGTCTC 2 cut(s) 934, 1669
Bsp1286I GDGCHC 5 cut(s) 25, 387, 461, 1787, 1812
Bsp143I GATC 5 cut(s) 47, 634, 1045, 1479, 1699
Bsp19I CCATGG 1 cut(s) 1486
BspACI CCGC 4 cut(s) 14, 16, 419, 1317
BspANI GGCC 3 cut(s) 168, 270, 1710
BspCNI CTCAG 1 cut(s) 238
BspDI ATCGAT 1 cut(s) 1478
BspFNI CGCG 1 cut(s) 16
BspHI TCATGA 1 cut(s) 1048
BspLI GGNNCC 2 cut(s) 636, 1872
BspMI ACCTGC 1 cut(s) 1706
BspPI GGATC 2 cut(s) 629, 642
BspTNI GGTCTC 2 cut(s) 934, 1669
BsrDI GCAATG 3 cut(s) 409, 685, 1938
BsrI ACTGG 3 cut(s) 132, 582, 833
BssECI CCNNGG 3 cut(s) 14, 462, 1486
BssMI GATC 5 cut(s) 47, 634, 1045, 1479, 1699
BssNAI GTATAC 1 cut(s) 145
BssT1I CCWWGG 1 cut(s) 1486
Bst1107I GTATAC 1 cut(s) 145
Bst2UI CCWGG 3 cut(s) 464, 1433, 1991
Bst4CI ACNGT 5 cut(s) 1193, 1576, 1840, 2012, 2018
Bst6I CTCTTC 2 cut(s) 932, 1731
BstBAI YACGTR 2 cut(s) 563, 668
BstC8I GCNNGC 1 cut(s) 1890
BstDEI CTNAG 2 cut(s) 225, 647
BstDSI CCRYGG 2 cut(s) 14, 1486
BstENI CCTNNNNNAGG 1 cut(s) 1994
BstFNI CGCG 1 cut(s) 16
BstKTI GATC 5 cut(s) 50, 637, 1048, 1482, 1702
BstMAI GTCTC 3 cut(s) 429, 934, 1669
BstMBI GATC 5 cut(s) 47, 634, 1045, 1479, 1699
BstMWI GCNNNNNNNGC 3 cut(s) 487, 815, 824
BstNI CCWGG 3 cut(s) 464, 1433, 1991
BstNSI RCATGY 1 cut(s) 675
BstPAI GACNNNNGTC 1 cut(s) 1980
BstSCI CCNGG 5 cut(s) 462, 1431, 1710, 1756, 1989
BstSFI CTRYAG 2 cut(s) 388, 1532
BstSLI GKGCMC 1 cut(s) 1812
BstUI CGCG 1 cut(s) 16
BstV1I GCAGC 6 cut(s) 696, 718, 879, 1173, 1307, 1731
BstV2I GAAGAC 1 cut(s) 1514
BstX2I RGATCY 1 cut(s) 634
BstXI CCANNNNNNTGG 1 cut(s) 769
BstYI RGATCY 1 cut(s) 634
BstZ17I GTATAC 1 cut(s) 145
Bsu15I ATCGAT 1 cut(s) 1478
BsuI GTATCC 1 cut(s) 657
BsuRI GGCC 3 cut(s) 168, 270, 1710
BsuTUI ATCGAT 1 cut(s) 1478
BtgI CCRYGG 2 cut(s) 14, 1486
BtsI GCAGTG 2 cut(s) 1108, 1926
BtsIMutI CAGTG 7 cut(s) 139, 840, 1108, 1125, 1189, 1581, 1926
BveI ACCTGC 1 cut(s) 1706
Cac8I GCNNGC 1 cut(s) 1890
CaiI CAGNNNCTG 1 cut(s) 1298
CciI TCATGA 1 cut(s) 1048
Cfr13I GGNCC 1 cut(s) 1870
Cfr42I CCGCGG 1 cut(s) 17
ClaI ATCGAT 1 cut(s) 1478
CseI GACGC 1 cut(s) 330
Csp6I GTAC 2 cut(s) 372, 781
CviAII CATG 9 cut(s) 266, 672, 1049, 1380, 1415, 1487, 1689, 1693, 1727
CviQI GTAC 2 cut(s) 372, 781
DdeI CTNAG 2 cut(s) 225, 647
DpnI GATC 5 cut(s) 49, 636, 1047, 1481, 1701
DpnII GATC 5 cut(s) 47, 634, 1045, 1479, 1699
EaeI YGGCCR 1 cut(s) 268
Eam1104I CTCTTC 2 cut(s) 932, 1731
EarI CTCTTC 2 cut(s) 932, 1731
Ecl136II GAGCTC 3 cut(s) 23, 459, 1785
Eco130I CCWWGG 1 cut(s) 1486
Eco24I GRGCYC 4 cut(s) 25, 387, 461, 1787
Eco31I GGTCTC 2 cut(s) 934, 1669
Eco47I GGWCC 1 cut(s) 1870
Eco53kI GAGCTC 3 cut(s) 23, 459, 1785
Eco57I CTGAAG 1 cut(s) 1755
EcoICRI GAGCTC 3 cut(s) 23, 459, 1785
EcoNI CCTNNNNNAGG 1 cut(s) 1994
EcoO109I RGGNCCY 1 cut(s) 1870
EcoRI GAATTC 1 cut(s) 856
EcoRII CCWGG 3 cut(s) 462, 1431, 1989
EcoT14I CCWWGG 1 cut(s) 1486
EcoT22I ATGCAT 1 cut(s) 1694
EcoT38I GRGCYC 4 cut(s) 25, 387, 461, 1787
ErhI CCWWGG 1 cut(s) 1486
FaeI CATG 9 cut(s) 269, 675, 1052, 1383, 1418, 1490, 1692, 1696, 1730
FalI AAGNNNNNCTT 2 cut(s) 1251, 1283
FaqI GGGAC 4 cut(s) 200, 379, 1842, 1988
FatI CATG 9 cut(s) 265, 671, 1048, 1379, 1414, 1486, 1688, 1692, 1726
FauNDI CATATG 1 cut(s) 1399
FbaI TGATCA 1 cut(s) 1045
FblI GTMKAC 3 cut(s) 144, 344, 468
Fnu4HI GCNGC 7 cut(s) 707, 710, 893, 1187, 1318, 1321, 1745
FriOI GRGCYC 4 cut(s) 25, 387, 461, 1787
Fsp4HI GCNGC 7 cut(s) 707, 710, 893, 1187, 1318, 1321, 1745
FspBI CTAG 2 cut(s) 918, 981
GluI GCNGC 7 cut(s) 707, 710, 893, 1187, 1318, 1321, 1745
HaeIII GGCC 3 cut(s) 168, 270, 1710
HapII CCGG 3 cut(s) 157, 1711, 1758
HgaI GACGC 1 cut(s) 330
Hin1II CATG 9 cut(s) 269, 675, 1052, 1383, 1418, 1490, 1692, 1696, 1730
HincII GTYRAC 1 cut(s) 345
HindII GTYRAC 1 cut(s) 345
HindIII AAGCTT 4 cut(s) 686, 1284, 1421, 1890
HinfI GANTC 5 cut(s) 110, 743, 988, 1361, 1640
HpaII CCGG 3 cut(s) 157, 1711, 1758
HphI GGTGA 4 cut(s) 1446, 1526, 1778, 2006
Hpy166II GTNNAC 7 cut(s) 145, 345, 469, 575, 1385, 1810, 2002
Hpy188I TCNGA 5 cut(s) 993, 1080, 1366, 1909, 1943
Hpy188III TCNNGA 5 cut(s) 284, 905, 1049, 1142, 1253
Hpy8I GTNNAC 7 cut(s) 145, 345, 469, 575, 1385, 1810, 2002
Hpy99I CGWCG 1 cut(s) 346
HpyAV CCTTC 4 cut(s) 389, 692, 721, 1461
HpyCH4III ACNGT 5 cut(s) 1193, 1576, 1840, 2012, 2018
HpyCH4IV ACGT 2 cut(s) 562, 667
HpyF10VI GCNNNNNNNGC 3 cut(s) 487, 815, 824
HpyF3I CTNAG 2 cut(s) 225, 647
HpySE526I ACGT 2 cut(s) 562, 667
Hsp92II CATG 9 cut(s) 269, 675, 1052, 1383, 1418, 1490, 1692, 1696, 1730
Ksp22I TGATCA 1 cut(s) 1045
KspI CCGCGG 1 cut(s) 17
Kzo9I GATC 5 cut(s) 47, 634, 1045, 1479, 1699
LmnI GCTCC 4 cut(s) 456, 464, 1782, 1855
Lsp1109I GCAGC 6 cut(s) 696, 718, 879, 1173, 1307, 1731
LweI GCATC 6 cut(s) 289, 367, 796, 889, 912, 1042
MaeI CTAG 2 cut(s) 918, 981
MaeII ACGT 2 cut(s) 562, 667
MalI GATC 5 cut(s) 49, 636, 1047, 1481, 1701
MboI GATC 5 cut(s) 47, 634, 1045, 1479, 1699
MboII GAAGA 5 cut(s) 35, 949, 1514, 1631, 1748
MflI RGATCY 1 cut(s) 634
MhlI GDGCHC 5 cut(s) 25, 387, 461, 1787, 1812
MlyI GAGTC 1 cut(s) 104
MmeI TCCRAC 3 cut(s) 174, 603, 720
Mph1103I ATGCAT 1 cut(s) 1694
MroXI GAANNNNTTC 3 cut(s) 399, 828, 1521
MseI TTAA 2 cut(s) 1172, 1589
MslI CAYNNNNRTG 7 cut(s) 717, 1023, 1194, 1338, 1491, 1815, 1931
MspA1I CMGCKG 2 cut(s) 16, 709
MspI CCGG 3 cut(s) 157, 1711, 1758
MspR9I CCNGG 5 cut(s) 464, 1433, 1712, 1758, 1991
MvaI CCWGG 3 cut(s) 464, 1433, 1991
MvnI CGCG 1 cut(s) 16
MwoI GCNNNNNNNGC 3 cut(s) 487, 815, 824
NciI CCSGG 2 cut(s) 1712, 1758
NcoI CCATGG 1 cut(s) 1486
NdeI CATATG 1 cut(s) 1399
NdeII GATC 5 cut(s) 47, 634, 1045, 1479, 1699
NlaIII CATG 9 cut(s) 269, 675, 1052, 1383, 1418, 1490, 1692, 1696, 1730
NlaIV GGNNCC 2 cut(s) 636, 1872
NmuCI GTSAC 7 cut(s) 134, 238, 1103, 1570, 1766, 1982, 2012
NsiI ATGCAT 1 cut(s) 1694
NspI RCATGY 1 cut(s) 675
OliI CACNNNNGTG 1 cut(s) 1194
PagI TCATGA 1 cut(s) 1048
PcsI WCGNNNNNNNCGW 2 cut(s) 43, 857
PdmI GAANNNNTTC 3 cut(s) 399, 828, 1521
PfeI GAWTC 4 cut(s) 743, 988, 1361, 1640
PkrI GCNGC 7 cut(s) 708, 711, 894, 1188, 1319, 1322, 1746
PleI GAGTC 1 cut(s) 104
PpsI GAGTC 1 cut(s) 104
Ppu21I YACGTR 2 cut(s) 563, 668
PpuMI RGGWCCY 1 cut(s) 1870
PshAI GACNNNNGTC 1 cut(s) 1980
PshBI ATTAAT 1 cut(s) 1172
PsiI TTATAA 1 cut(s) 176
Psp124BI GAGCTC 3 cut(s) 25, 461, 1787
Psp5II RGGWCCY 1 cut(s) 1870
Psp6I CCWGG 3 cut(s) 462, 1431, 1989
PspGI CCWGG 3 cut(s) 462, 1431, 1989
PspN4I GGNNCC 2 cut(s) 636, 1872
PspPI GGNCC 1 cut(s) 1870
PspPPI RGGWCCY 1 cut(s) 1870
PstNI CAGNNNCTG 1 cut(s) 1298
PsuI RGATCY 1 cut(s) 634
PvuII CAGCTG 1 cut(s) 709
RsaI GTAC 2 cut(s) 373, 782
RsaNI GTAC 2 cut(s) 372, 781
RseI CAYNNNNRTG 7 cut(s) 717, 1023, 1194, 1338, 1491, 1815, 1931
SacI GAGCTC 3 cut(s) 25, 461, 1787
SacII CCGCGG 1 cut(s) 17
SalI GTCGAC 1 cut(s) 343
SaqAI TTAA 2 cut(s) 1172, 1589
SatI GCNGC 7 cut(s) 707, 710, 893, 1187, 1318, 1321, 1745
Sau3AI GATC 5 cut(s) 47, 634, 1045, 1479, 1699
Sau96I GGNCC 1 cut(s) 1870
SchI GAGTC 1 cut(s) 104
ScrFI CCNGG 5 cut(s) 464, 1433, 1712, 1758, 1991
SduI GDGCHC 5 cut(s) 25, 387, 461, 1787, 1812
SfaNI GCATC 6 cut(s) 289, 367, 796, 889, 912, 1042
SfcI CTRYAG 2 cut(s) 388, 1532
Sfr303I CCGCGG 1 cut(s) 17
SgrBI CCGCGG 1 cut(s) 17
SinI GGWCC 1 cut(s) 1870
SmiMI CAYNNNNRTG 7 cut(s) 717, 1023, 1194, 1338, 1491, 1815, 1931
SmlI CTYRAG 2 cut(s) 905, 1859
SmoI CTYRAG 2 cut(s) 905, 1859
SsiI CCGC 4 cut(s) 14, 16, 419, 1317
SspI AATATT 1 cut(s) 997
SspMI CTAG 2 cut(s) 918, 981
SstI GAGCTC 3 cut(s) 25, 461, 1787
StyD4I CCNGG 5 cut(s) 462, 1431, 1710, 1756, 1989
StyI CCWWGG 1 cut(s) 1486
TaaI ACNGT 5 cut(s) 1193, 1576, 1840, 2012, 2018
TaiI ACGT 2 cut(s) 565, 670
TaqII GACCGA 1 cut(s) 1689
TatI WGTACW 2 cut(s) 371, 780
TauI GCSGC 1 cut(s) 1320
TfiI GAWTC 4 cut(s) 743, 988, 1361, 1640
Tru1I TTAA 2 cut(s) 1172, 1589
Tru9I TTAA 2 cut(s) 1172, 1589
TscAI CASTG 7 cut(s) 139, 840, 1108, 1125, 1196, 1581, 1933
TseFI GTSAC 7 cut(s) 134, 238, 1103, 1570, 1766, 1982, 2012
TseI GCWGC 6 cut(s) 706, 709, 892, 1186, 1320, 1744
Tsp45I GTSAC 7 cut(s) 134, 238, 1103, 1570, 1766, 1982, 2012
TspGWI ACGGA 1 cut(s) 941
TspRI CASTG 7 cut(s) 139, 840, 1108, 1125, 1196, 1581, 1933
VneI GTGCAC 1 cut(s) 1808
VpaK11BI GGWCC 1 cut(s) 1870
VspI ATTAAT 1 cut(s) 1172
XagI CCTNNNNNAGG 1 cut(s) 1994
XapI RAATTY 5 cut(s) 550, 856, 973, 1150, 1946
XceI RCATGY 1 cut(s) 675
XcmI CCANNNNNNNNNTGG 1 cut(s) 769
XmiI GTMKAC 3 cut(s) 144, 344, 468
XmnI GAANNNNTTC 3 cut(s) 399, 828, 1521
XspI CTAG 2 cut(s) 918, 981
Zsp2I ATGCAT 1 cut(s) 1694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.