Rroxscaffold_6G00424490

Sucrose nonfermenting 4-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0001327
Physical Location & Seq
Forward (+)
45614860 .. 45622170
7311 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00424490.1

Sequence Viewer

Length: 1536 bp
ATGTTTGGTTCTGGTCACGGTACCGCATACCAGAGCAGTGGACTTCCAGGACCGATTTTAATTCCGACCCGGTTCGTCTGGCCTTATGGGGGAAGAAGGGTGTTTCTCAGTGGCTCTTTTACAAGGTGGTTAGAACATATACCTATGTCTCCAATGGAGGGGTGCCCAACTGCGTTTCAAGTTGTTTGGAACTTAACACCTGGATATCACCAGTACAAGTTCTTGGTTGACGGAGAATGGCGACATAACGAGCAACTGCCTTTTGTGACTGGGAATTGTGGAATAGTGAATACCGTCTTTCTAACTGGGGAGCCAGATACAGTTCCTACTAGTTTCAGTCCCGAGACTTCTGGCAGATCCAATATGGATGTAGATAACGAAGTCTTTACGCGTATGGAAGTAGCTCCAAGGATCTCAGCGGCTGAATTGGAGGTCTCTCGGCAGCGTATATCAGTATTTCTATCCACACATACTGCTTATGAGTTGCTTCCTGAGTCAGGCAAGGGAGTACCTGTGGCTCCTCTCTGGGATTTTGAAAAGGGACAATTTGTAGGAGTTCTTAGCGCATTGGATTTCATCTTAATATTGAGAGAGCTTGGGAATCATGGGTCAAATTTGACGGGGGAAGAGCTGGAGACTCATACTATAGCAGCATGGAAAGAGGGAAGATTAAATTTGAACAGACAACTTGATGGAAATGGGAGATGCTATCCGCCACATTTGATCTCTGCCGGGCCTTATGATTCTCTCAAAGAAGTTGCTGTCAGAATTCTGCAAAACAAGGTGGCCACAGTTCCAATTCTTCATACTTCTTCAGAGGATGGTTCATTTCCACAGCTATTGCATCTTGCCTCCCTTTCGGGAATATTAAAATGCATATGCAGGCATTTCAGACATTCTTCTACCTCCTTACCAATACTCCAACATCCTATTTCAGAATTCCATATAGGTACGTGGGTTCCAAATATTGGGGAGTCAAATGGAAGGCTGCTGGCTATCTTGAGACCAAATTCATCTCTTGCTGATGCCCTGTCTTTGTTGGTACAAGCTGAAGTTAGTTCAATACCCATAGTGGATGACAATGATTCGTTGCTGGATGTTTATTCACGAAGTGATATTACTGCTTTGGCAAGAGACAAAGCTTATGCACAGATTCGCCTTGATCAATTGACTATCCATCAGGTAATTGCTAAAACTGATGAGGCTTTTACATGTGGGATTGTGACCTTGCAACTTGGGCAAAATGCAAATTCTCCTTATGGCTTCTTCAGTGGTCAGAGATGTCAGATGTGTTTGCGATCTGATCCTCTGCATAAAGTGATGGAGCGGTTGGCAAATCCAGGTGTGAGGAGACTTGTGATTGTGGAGGCCGGAAGCAAGCGTGTAGAGGGCATCATTTCATTGAGTGATGTGTTCAGGAAGGTGCTTCTAATTCACAGGTTTCTTGGGAATAACCAAGCAATTCTCGAGTTGCTTTTGGCAGCTGGTAATAACTTAGGGAATCAGAATGACTCCAAGGAATCGATGAGAGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000266 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006833 GO:0006950 GO:0006996 GO:0007005 GO:0007031 GO:0007154 GO:0008047 GO:0008150 GO:0008152 GO:0009267 GO:0009605 GO:0009856 GO:0009859 GO:0009875 GO:0009893 GO:0009987 GO:0009991 GO:0010562 GO:0010604 GO:0016043 GO:0016301 GO:0016310 GO:0016559 GO:0016740 GO:0016772 GO:0016773 GO:0019207 GO:0019209 GO:0019220 GO:0019222 GO:0019538 GO:0019887 GO:0022414 GO:0030234 GO:0030295 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031667 GO:0031668 GO:0031669 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0033554 GO:0033674 GO:0036211 GO:0042044 GO:0042149 GO:0042325 GO:0042327 GO:0042594 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044706 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048285 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051704 GO:0051716 GO:0060255 GO:0065007 GO:0065009 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0098772 GO:0140096 GO:1901564 GO:2000377
KEGG Pathways
Metabolic & Signaling
ko04068 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 map04068 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410
Pfam Domains
Protein Families
AMPK1_CBM CBS

Protein Analysis

511

Amino Acids

56.39

Weight (kDa)

6.28

Isoelectric Point (pI)

38.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AMPK1_CBM PF16561 21 - 101 4.6e-25 Glycogen recognition site of AMP-activated protein kinase
CBS PF00571 333 - 375 5.3e-06 CBS domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 20
AccB1I GGYRCC 2 cut(s) 20, 162
AccB7I CCANNNNNTGG 1 cut(s) 968
AccBSI CCGCTC 1 cut(s) 1327
AccII CGCG 1 cut(s) 391
AciI CCGC 4 cut(s) 24, 419, 713, 1327
AclWI GGATC 3 cut(s) 351, 419, 1298
AcoI YGGCCR 1 cut(s) 786
AcsI RAATTY 6 cut(s) 613, 673, 768, 938, 1009, 1249
AcuI CTGAAG 3 cut(s) 798, 1071, 1252
AdeI CACNNNGTG 1 cut(s) 1112
AfaI GTAC 5 cut(s) 22, 215, 510, 952, 1044
AfiI CCNNNNNNNGG 4 cut(s) 89, 158, 497, 968
AflIII ACRYGT 2 cut(s) 389, 1211
AgsI TTSAA 4 cut(s) 179, 536, 679, 1062
AhlI ACTAGT 1 cut(s) 329
AjnI CCWGG 3 cut(s) 46, 199, 1339
AluBI AGCT 7 cut(s) 404, 595, 631, 838, 1049, 1142, 1484
AluI AGCT 7 cut(s) 404, 595, 631, 838, 1049, 1142, 1484
Alw26I GTCTC 7 cut(s) 153, 338, 439, 629, 997, 1128, 1345
AlwI GGATC 3 cut(s) 351, 419, 1298
AlwNI CAGNNNCTG 1 cut(s) 422
Ama87I CYCGRG 2 cut(s) 341, 1466
AoxI GGCC 4 cut(s) 80, 734, 786, 1368
ApeKI GCWGC 4 cut(s) 442, 650, 988, 1481
ApoI RAATTY 6 cut(s) 613, 673, 768, 938, 1009, 1249
Asp718I GGTACC 1 cut(s) 20
AspLEI GCGC 1 cut(s) 566
AspS9I GGNCC 2 cut(s) 50, 734
AsuC2I CCSGG 2 cut(s) 70, 733
AsuHPI GGTGA 1 cut(s) 200
AvaI CYCGRG 2 cut(s) 341, 1466
AvaII GGWCC 1 cut(s) 50
BaeGI GKGCMC 1 cut(s) 167
BaeI ACNNNNGTAYC 2 cut(s) 942, 975
BalI TGGCCA 1 cut(s) 788
BanI GGYRCC 2 cut(s) 20, 162
BarI GAAGNNNNNNTAC 2 cut(s) 1102, 1134
BbvI GCAGC 4 cut(s) 454, 662, 975, 1493
BccI CCATC 4 cut(s) 686, 815, 1185, 1315
BciT130I CCWGG 3 cut(s) 48, 201, 1341
BclI TGATCA 1 cut(s) 1162
BcnI CCSGG 2 cut(s) 70, 733
BcoDI GTCTC 7 cut(s) 153, 338, 439, 629, 997, 1128, 1345
BcuI ACTAGT 1 cut(s) 329
BfaI CTAG 1 cut(s) 330
BfmI CTRYAG 1 cut(s) 645
BisI GCNGC 5 cut(s) 420, 443, 651, 989, 1482
BlsI GCNGC 5 cut(s) 421, 444, 652, 990, 1483
Bme1390I CCNGG 5 cut(s) 48, 70, 201, 733, 1341
Bme18I GGWCC 1 cut(s) 50
BmeT110I CYCGRG 2 cut(s) 341, 1466
BmgT120I GGNCC 2 cut(s) 50, 734
BmiI GGNNCC 5 cut(s) 22, 164, 312, 519, 960
BmrFI CCNGG 5 cut(s) 48, 70, 201, 733, 1341
BmrI ACTGGG 2 cut(s) 279, 315
BmsI GCATC 4 cut(s) 695, 853, 1015, 1401
BmuI ACTGGG 2 cut(s) 279, 315
BpmI CTGGAG 1 cut(s) 653
BpuEI CTTGAG 1 cut(s) 1021
BpuMI CCSGG 2 cut(s) 70, 733
Bsa29I ATCGAT 1 cut(s) 1523
BsaAI YACGTR 1 cut(s) 954
BsaI GGTCTC 2 cut(s) 439, 997
BsaJI CCNNGG 2 cut(s) 407, 1515
BsaXI ACNNNNNCTCC 4 cut(s) 498, 528, 903, 933
Bsc4I CCNNNNNNNGG 4 cut(s) 89, 158, 497, 968
Bse1I ACTGG 3 cut(s) 211, 274, 310
BseBI CCWGG 3 cut(s) 48, 201, 1341
BseCI ATCGAT 1 cut(s) 1523
BseDI CCNNGG 2 cut(s) 407, 1515
BseGI GGATG 5 cut(s) 373, 826, 925, 1081, 1102
BseLI CCNNNNNNNGG 4 cut(s) 89, 158, 497, 968
BseMII CTCAG 3 cut(s) 121, 429, 483
BseNI ACTGG 3 cut(s) 211, 274, 310
BseRI GAGGAG 2 cut(s) 510, 1363
BseSI GKGCMC 1 cut(s) 167
BseXI GCAGC 4 cut(s) 454, 662, 975, 1493
Bsh1236I CGCG 1 cut(s) 391
BshFI GGCC 4 cut(s) 82, 736, 788, 1370
BshNI GGYRCC 2 cut(s) 20, 162
BshVI ATCGAT 1 cut(s) 1523
BsiHKCI CYCGRG 2 cut(s) 341, 1466
BsiSI CCGG 3 cut(s) 70, 732, 1371
BslFI GGGAC 2 cut(s) 324, 555
BslI CCNNNNNNNGG 4 cut(s) 89, 158, 497, 968
BsmAI GTCTC 7 cut(s) 153, 338, 439, 629, 997, 1128, 1345
BsmFI GGGAC 2 cut(s) 324, 555
BsnI GGCC 4 cut(s) 82, 736, 788, 1370
Bso31I GGTCTC 2 cut(s) 439, 997
BsoBI CYCGRG 2 cut(s) 341, 1466
Bsp1286I GDGCHC 1 cut(s) 167
Bsp143I GATC 6 cut(s) 356, 411, 723, 1162, 1298, 1303
BspACI CCGC 4 cut(s) 24, 419, 713, 1327
BspANI GGCC 4 cut(s) 82, 736, 788, 1370
BspCNI CTCAG 3 cut(s) 120, 428, 484
BspDI ATCGAT 1 cut(s) 1523
BspFNI CGCG 1 cut(s) 391
BspLI GGNNCC 5 cut(s) 22, 164, 312, 519, 960
BspPI GGATC 3 cut(s) 351, 419, 1298
BspQI GCTCTTC 1 cut(s) 621
BspT107I GGYRCC 2 cut(s) 20, 162
BspTNI GGTCTC 2 cut(s) 439, 997
BsrBI CCGCTC 1 cut(s) 1327
BsrI ACTGG 3 cut(s) 211, 274, 310
BssECI CCNNGG 2 cut(s) 407, 1515
BssMI GATC 6 cut(s) 356, 411, 723, 1162, 1298, 1303
BssT1I CCWWGG 2 cut(s) 407, 1515
Bst2UI CCWGG 3 cut(s) 48, 201, 1341
Bst4CI ACNGT 4 cut(s) 20, 295, 322, 793
Bst6I CTCTTC 1 cut(s) 621
BstBAI YACGTR 1 cut(s) 954
BstC8I GCNNGC 3 cut(s) 884, 993, 1379
BstDEI CTNAG 5 cut(s) 107, 415, 492, 560, 1495
BstENI CCTNNNNNAGG 1 cut(s) 495
BstF5I GGATG 5 cut(s) 373, 826, 925, 1081, 1102
BstFNI CGCG 1 cut(s) 391
BstHHI GCGC 1 cut(s) 566
BstKTI GATC 6 cut(s) 359, 414, 726, 1165, 1301, 1306
BstMAI GTCTC 7 cut(s) 153, 338, 439, 629, 997, 1128, 1345
BstMBI GATC 6 cut(s) 356, 411, 723, 1162, 1298, 1303
BstMWI GCNNNNNNNGC 1 cut(s) 1237
BstNI CCWGG 3 cut(s) 48, 201, 1341
BstNSI RCATGY 1 cut(s) 1215
BstSCI CCNGG 5 cut(s) 46, 68, 199, 731, 1339
BstSFI CTRYAG 1 cut(s) 645
BstSLI GKGCMC 1 cut(s) 167
BstUI CGCG 1 cut(s) 391
BstV1I GCAGC 4 cut(s) 454, 662, 975, 1493
BstX2I RGATCY 2 cut(s) 356, 411
BstXI CCANNNNNNTGG 1 cut(s) 38
BstYI RGATCY 2 cut(s) 356, 411
Bsu15I ATCGAT 1 cut(s) 1523
BsuRI GGCC 4 cut(s) 82, 736, 788, 1370
BsuTUI ATCGAT 1 cut(s) 1523
BtsCI GGATG 5 cut(s) 373, 826, 925, 1081, 1102
BtsI GCAGTG 1 cut(s) 43
BtsIMutI CAGTG 3 cut(s) 43, 115, 1276
Cac8I GCNNGC 3 cut(s) 884, 993, 1379
CaiI CAGNNNCTG 1 cut(s) 422
CfoI GCGC 1 cut(s) 566
Cfr13I GGNCC 2 cut(s) 50, 734
ClaI ATCGAT 1 cut(s) 1523
Csp6I GTAC 5 cut(s) 21, 214, 509, 951, 1043
CspCI CAANNNNNGTGG 2 cut(s) 822, 857
CviAII CATG 3 cut(s) 605, 654, 1212
CviQI GTAC 5 cut(s) 21, 214, 509, 951, 1043
DdeI CTNAG 5 cut(s) 107, 415, 492, 560, 1495
DpnI GATC 6 cut(s) 358, 413, 725, 1164, 1300, 1305
DpnII GATC 6 cut(s) 356, 411, 723, 1162, 1298, 1303
DraIII CACNNNGTG 1 cut(s) 1112
EaeI YGGCCR 1 cut(s) 786
Eam1104I CTCTTC 1 cut(s) 621
EarI CTCTTC 1 cut(s) 621
EciI GGCGGA 1 cut(s) 702
Eco130I CCWWGG 2 cut(s) 407, 1515
Eco31I GGTCTC 2 cut(s) 439, 997
Eco32I GATATC 1 cut(s) 206
Eco47I GGWCC 1 cut(s) 50
Eco57I CTGAAG 3 cut(s) 798, 1071, 1252
Eco88I CYCGRG 2 cut(s) 341, 1466
EcoNI CCTNNNNNAGG 1 cut(s) 495
EcoRI GAATTC 2 cut(s) 768, 938
EcoRII CCWGG 3 cut(s) 46, 199, 1339
EcoRV GATATC 1 cut(s) 206
EcoT14I CCWWGG 2 cut(s) 407, 1515
EcoT22I ATGCAT 1 cut(s) 878
ErhI CCWWGG 2 cut(s) 407, 1515
FaeI CATG 3 cut(s) 608, 657, 1215
FaqI GGGAC 2 cut(s) 324, 555
FatI CATG 3 cut(s) 604, 653, 1211
FauNDI CATATG 1 cut(s) 878
FbaI TGATCA 1 cut(s) 1162
Fnu4HI GCNGC 5 cut(s) 420, 443, 651, 989, 1482
FokI GGATG 5 cut(s) 380, 833, 912, 1088, 1109
Fsp4HI GCNGC 5 cut(s) 420, 443, 651, 989, 1482
FspBI CTAG 1 cut(s) 330
GlaI GCGC 1 cut(s) 565
GluI GCNGC 5 cut(s) 420, 443, 651, 989, 1482
GsuI CTGGAG 1 cut(s) 653
HaeIII GGCC 4 cut(s) 82, 736, 788, 1370
HapII CCGG 3 cut(s) 70, 732, 1371
HhaI GCGC 1 cut(s) 566
Hin1II CATG 3 cut(s) 608, 657, 1215
Hin6I GCGC 1 cut(s) 564
HinP1I GCGC 1 cut(s) 564
HincII GTYRAC 1 cut(s) 229
HindII GTYRAC 1 cut(s) 229
HindIII AAGCTT 1 cut(s) 1140
HpaII CCGG 3 cut(s) 70, 732, 1371
HphI GGTGA 1 cut(s) 200
Hpy166II GTNNAC 2 cut(s) 41, 229
Hpy188I TCNGA 9 cut(s) 66, 767, 817, 893, 937, 1278, 1287, 1303, 1506
Hpy188III TCNNGA 7 cut(s) 341, 491, 861, 1000, 1107, 1417, 1466
Hpy8I GTNNAC 2 cut(s) 41, 229
HpyAV CCTTC 3 cut(s) 90, 978, 1414
HpyCH4III ACNGT 4 cut(s) 20, 295, 322, 793
HpyCH4IV ACGT 1 cut(s) 953
HpyCH4V TGCA 8 cut(s) 775, 844, 876, 882, 1148, 1231, 1247, 1312
HpyF10VI GCNNNNNNNGC 1 cut(s) 1237
HpyF3I CTNAG 5 cut(s) 107, 415, 492, 560, 1495
HpySE526I ACGT 1 cut(s) 953
Hsp92II CATG 3 cut(s) 608, 657, 1215
HspAI GCGC 1 cut(s) 564
KpnI GGTACC 1 cut(s) 24
Ksp22I TGATCA 1 cut(s) 1162
Kzo9I GATC 6 cut(s) 356, 411, 723, 1162, 1298, 1303
LguI GCTCTTC 1 cut(s) 621
LmnI GCTCC 4 cut(s) 310, 409, 523, 1324
Lsp1109I GCAGC 4 cut(s) 454, 662, 975, 1493
LweI GCATC 4 cut(s) 695, 853, 1015, 1401
MaeI CTAG 1 cut(s) 330
MaeII ACGT 1 cut(s) 953
MaeIII GTNAC 3 cut(s) 14, 265, 1222
MalI GATC 6 cut(s) 358, 413, 725, 1164, 1300, 1305
MbiI CCGCTC 1 cut(s) 1327
MboI GATC 6 cut(s) 356, 411, 723, 1162, 1298, 1303
MboII GAAGA 7 cut(s) 105, 638, 678, 794, 804, 891, 1258
MfeI CAATTG 1 cut(s) 1166
MflI RGATCY 2 cut(s) 356, 411
MhlI GDGCHC 1 cut(s) 167
MlsI TGGCCA 1 cut(s) 788
MluI ACGCGT 1 cut(s) 389
MluNI TGGCCA 1 cut(s) 788
MlyI GAGTC 4 cut(s) 503, 631, 983, 1505
MmeI TCCRAC 2 cut(s) 89, 946
Mox20I TGGCCA 1 cut(s) 788
Mph1103I ATGCAT 1 cut(s) 878
MscI TGGCCA 1 cut(s) 788
MseI TTAA 5 cut(s) 59, 194, 581, 671, 869
Msp20I TGGCCA 1 cut(s) 788
MspA1I CMGCKG 2 cut(s) 419, 1484
MspI CCGG 3 cut(s) 70, 732, 1371
MspR9I CCNGG 5 cut(s) 48, 70, 201, 733, 1341
MunI CAATTG 1 cut(s) 1166
MvaI CCWGG 3 cut(s) 48, 201, 1341
MvnI CGCG 1 cut(s) 391
MwoI GCNNNNNNNGC 1 cut(s) 1237
NciI CCSGG 2 cut(s) 70, 733
NdeI CATATG 1 cut(s) 878
NdeII GATC 6 cut(s) 356, 411, 723, 1162, 1298, 1303
NlaIII CATG 3 cut(s) 608, 657, 1215
NlaIV GGNNCC 5 cut(s) 22, 164, 312, 519, 960
NmeAIII GCCGAG 1 cut(s) 418
NmuCI GTSAC 3 cut(s) 14, 265, 1222
NsiI ATGCAT 1 cut(s) 878
NspI RCATGY 1 cut(s) 1215
PaeR7I CTCGAG 1 cut(s) 1466
PciI ACATGT 1 cut(s) 1211
PciSI GCTCTTC 1 cut(s) 621
PfeI GAWTC 6 cut(s) 601, 743, 1085, 1153, 1501, 1520
PflMI CCANNNNNTGG 1 cut(s) 968
PfoI TCCNGGA 1 cut(s) 46
PkrI GCNGC 5 cut(s) 421, 444, 652, 990, 1483
PleI GAGTC 4 cut(s) 502, 631, 982, 1505
PpsI GAGTC 4 cut(s) 502, 631, 982, 1505
Ppu21I YACGTR 1 cut(s) 954
PscI ACATGT 1 cut(s) 1211
Psp6I CCWGG 3 cut(s) 46, 199, 1339
PspGI CCWGG 3 cut(s) 46, 199, 1339
PspN4I GGNNCC 5 cut(s) 22, 164, 312, 519, 960
PspPI GGNCC 2 cut(s) 50, 734
PstNI CAGNNNCTG 1 cut(s) 422
PsuI RGATCY 2 cut(s) 356, 411
PvuII CAGCTG 1 cut(s) 1484
RsaI GTAC 5 cut(s) 22, 215, 510, 952, 1044
RsaNI GTAC 5 cut(s) 21, 214, 509, 951, 1043
SapI GCTCTTC 1 cut(s) 621
SaqAI TTAA 5 cut(s) 59, 194, 581, 671, 869
SatI GCNGC 5 cut(s) 420, 443, 651, 989, 1482
Sau3AI GATC 6 cut(s) 356, 411, 723, 1162, 1298, 1303
Sau96I GGNCC 2 cut(s) 50, 734
SchI GAGTC 4 cut(s) 503, 631, 983, 1505
ScrFI CCNGG 5 cut(s) 48, 70, 201, 733, 1341
SduI GDGCHC 1 cut(s) 167
SfaNI GCATC 4 cut(s) 695, 853, 1015, 1401
SfcI CTRYAG 1 cut(s) 645
Sfr274I CTCGAG 1 cut(s) 1466
SinI GGWCC 1 cut(s) 50
SlaI CTCGAG 1 cut(s) 1466
SmlI CTYRAG 2 cut(s) 1000, 1466
SmoI CTYRAG 2 cut(s) 1000, 1466
SpeI ACTAGT 1 cut(s) 329
SsiI CCGC 4 cut(s) 24, 419, 713, 1327
SspI AATATT 3 cut(s) 585, 867, 967
SspMI CTAG 1 cut(s) 330
StyD4I CCNGG 5 cut(s) 46, 68, 199, 731, 1339
StyI CCWWGG 2 cut(s) 407, 1515
TaaI ACNGT 4 cut(s) 20, 295, 322, 793
TaiI ACGT 1 cut(s) 956
TaqI TCGA 2 cut(s) 1467, 1523
TaqII GACCGA 1 cut(s) 67
TatI WGTACW 1 cut(s) 213
TauI GCSGC 1 cut(s) 422
TfiI GAWTC 6 cut(s) 601, 743, 1085, 1153, 1501, 1520
Tru1I TTAA 5 cut(s) 59, 194, 581, 671, 869
Tru9I TTAA 5 cut(s) 59, 194, 581, 671, 869
TscAI CASTG 3 cut(s) 43, 115, 1276
TseFI GTSAC 3 cut(s) 14, 265, 1222
TseI GCWGC 4 cut(s) 442, 650, 988, 1481
Tsp45I GTSAC 3 cut(s) 14, 265, 1222
TspDTI ATGAA 5 cut(s) 565, 794, 816, 1002, 1389
TspGWI ACGGA 1 cut(s) 246
TspRI CASTG 3 cut(s) 43, 115, 1276
Van91I CCANNNNNTGG 1 cut(s) 968
VpaK11BI GGWCC 1 cut(s) 50
XagI CCTNNNNNAGG 1 cut(s) 495
XapI RAATTY 6 cut(s) 613, 673, 768, 938, 1009, 1249
XceI RCATGY 1 cut(s) 1215
XhoI CTCGAG 1 cut(s) 1466
XspI CTAG 1 cut(s) 330
Zsp2I ATGCAT 1 cut(s) 878
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.