Rorug04G0174100

Sucrose nonfermenting 4-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0001327
Physical Location & Seq
Reverse (-)
30622828 .. 30632090
9263 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0174100.1

Sequence Viewer

Length: 3537 bp
ATGGAAACCAGTGACTGGAGAACTCAACTTTCCACAGATTTGCGAGGAAAAGTTGTGAGAAAGCTTATAGATATCCTACGGAAACGTACCCCACCTTCTGAAGATCCTTTATCCCAACTGAAGAAGATACAGAGTATTGCGGTGAAATTCGAGGAAAAGGTTTATATGGACTCCAGTGACCAGAAAGAATATATGAGGAAGGTAACAGTAAAGTTGATGGCAGCAGAGGGATCACATCCAAATGTCGTTCCTAAATCATCACCAAACCCTCCCTGCGTTGGTCTAAAACCCTCAAATCTAGTTGCTAATCAAGGCCAGTCAATTGCTGTTCAATCCACTGATCAGTCTCAAGAATGTGAAGTTCCTGAACAGCATTCATTGCCTGACGTTCAAAATAATATTGCATGTGCTGGAGTTTCTGCTAACTTGGCACCTGCACGGACCACTGTCAGTGCTTCAGCTCAGGTTCTCCCGCCAAGTCAGAATCCTTATTCGCTGAAGTCAGTAGGAAGTTCATCAGGGAAAGGGATACCTTTTAATGAATCTGCCAATAATTTCAAGCAGGAGCAAGTGAAACAACATTCATCCCGCACTGACACTCCTCCAAATCCACATCATTGTAGGCAGGTCAAGCAGGAATACATTGATCCTCAGCAGAACCATAAGCAACTAAATCCAAATCTTTATAAGCAGGTCAAGCAGGAACATGATGCCCCATCATGCATAACTCAGCAACAGAAAGTACATCAGCAGCAGCACCACCAGCAAAAACTCTTGAAACATACTCCTCAACAATCGGTCATCCAAGCTCCTCTTCTACGACATTCTGAGTTGCATGTTTCTCCACTCTCTGATCGCCAGCAGGATCAGATTTCTTCTTTTAAACAGACATCACAATCTGTTATTAAGAATCATCATCAGACAGCCTTTGGGCAAACAAATCCACAATCCACTCCTGATATTCATCAGAAAGTATCATCAACTCCGGAGCACGTATTAATGCAATCACAGAAGCAACTACATGTGATTAGGAGTACGTTGACTCCTACTAATCCACAACAGAATCAGTTAAGCGAGCAACCAAATGGTCTGCGTGACTTGCAGCAGCAACATCATAGGTTGCCATTGCAGCACAATAATTTACTACAGGAGTTTAAGGGGCAAAGTATAATTCGTTCTAGTGCAAACCATGAGGCCCAAAGAAACAATATCTCTGTACGACATGGGAGCTCACAATTGCCTGAAGGTGGTAGGTCAGGCAAGCATCAATGCGAGGTTAAAATGCAGGGGGAAACCAGACAGACTGCTTCAGCTCTATTGCCAAATGAAGTGCAAAAATCACAACCACAGAATCTTGAAAGGCAACTGAACTCTCAATCACAGCCAAAGAAGATGCAAAATCTGCCATGTTCCGGGAGTATGCAAATAGCAGGACCAGCTTCCACATTTGGGCAAAGGATTTCAAATGTAGATAACTTGCAAGAGGAGCTCTATGAGAAGGTTGAAATTTTAAAAAGCAAATATTTAGCAGAACTGACACGGGTCGATCAAAAGATAGCATCTCATTTCCAAAAGCTCCATTCTATGCCTCAACACCCAGAAAGACAGAATATCAAGAAACTTAAAGCAATAAAGCACATGCATTACACTGTCAAATTTTACATTATGAATCTAAATGTGCCCAAAAGCAAAATTACACCTGCTTGCAAGGAAAAGCTGGGGTTATTGGAGGAAAAAATTGTTTCTTTCCTTCAAATATTTGAGCAGCGAAAGCCTGCTACCTTGCTCCAGCATGGAGAACCTTCCAATGTGCACTCTATGCCTCAATCAGTGCAACTTCATTCTCAGGCTCCTCAAGGTCAAACATGCCAAGACGAAAAGAAGCTGCAATCGCAGTCGGTGAACATACAGTGTTTTGATACAAGTATGCAGCACAGCAATGTGACAAATGTGGTGAATGGTTCTGATTCTCTATCTGAGCCTCCAATCCTGCAACATGACACGGTGCATTTGCGACGGAATTTGACTGAGCAAGATTCAGAACAAGCAAATTCTTTGAAGTTAGTAAACCAGGTTCCCTCGGAGTCCTTTAAACTTCCTAAAAGCAGCCCCCAACTACCAAATGATATGTTGTCACGAAATCCTGCGCTTAGACTAGAGTCGCGTGTGAATGCTCTTGAGTCAAGCTTCAGTACACATCAAGACATGCACTTGAAGTGGACTAATGAACAGCCAGATACTAAAACCCCAAAACAAGAACTTCAAAGGCAAAAGTCACAGCAGCAATTAGTACAACCAAAGCAGCAAATACTGCAGCAGCATCACCGGTCACCAGAGTTGCAGTCTAGGGATTTAACTCCAAATTCTTTGCCCAAAAGTCTTAAACCTTCCTCTCAACAAGTTCCTCAACATTCTTCTGTGAGTGAAAAGAAGAATCTTCCAATGCCTCCTATGAAACTTAAATCTCCTGTCATTTCCAGAAGTTCACCCGAGGCGGGAATTTCTTTGGCTCCCTTTGCTTCAACACATATACCAGGGGATTCTGAGAAACCTATGTCTGAAACTTCATTGGTTTCAAATGCAGTAAATATTGGAGGTCAACAAGCACAGGGTGCACCAGGAGCCATTCATTGTTCTTTTGATGGGTTGAATGCTGCTGAGCTGCCTGAGCAGCCTATTCAGAGATTGATTAAAATGGTTAACTCGGCGTCGTGTACAGCACTAAGTTCTTTTGCTTCAGACATTGGTTCAGTAGTGTGTATGACTGATAGAATGTCTGGACCAGATAATGTTCAGAGATCTAGAGCTGCGATTGGTGATTTGGCAGACATGACCAATTTTCATTTGCAGGAGAGATACTTCGCCTGGCAGGAAACAACTGTTGGAACAAGGATAATGAAGCGTCACAGAAGTATGCCAATTAGCTATGGAGCTTCAGAAAATAGCAGTATAAATGATAGCTTGTCACAGCTAAGTGATATGGAAAATTTTGACTTGGACTCACCTGCAATATCTTATAGCAAACGGCGTAGGCTTGAGGTGAATCATCTCTTAGAAGAAATTACCGCTATCAACCAACAACTAATAGACACTGTTTTAGATATTAGAGATGGAGAGACTATTCCATCAGTAGCCTCAGCTCCAATTCTCGATGGTGAAGGAACCATTGTTAGGTGTTCCTTCATCGCTGTAGCCGTTGCTCCTAATCTGAAGTCTGAATGTGTTCCAGCTCCAATGCTTGCAATCCAGCCTCTGCGATTGCTTGTTCCTGCAAATTATCCTTTGTGCTCTCCTATATTTATGGACAAGTTGAAAGTGGAAGTCAGTGATGATCAGGATCTTTTAGCAAAGGTAAAGTCGAAGCTCAATTTCTCTCTCCGGAACCTGACGGAACCCTTGTCACTTGGGGAGATAGCAAGGACATGGGACGTATGTGCCCGTGCGGTGATCTCTGAATATGCAGAGCAGAATGGAGGAGGAAGCTTCAGTTCTAAGTATGGCACCTGGGAAGACTGCCTCAGTGCTGCAGCTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000266 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006833 GO:0006950 GO:0006996 GO:0007005 GO:0007031 GO:0007154 GO:0008047 GO:0008150 GO:0008152 GO:0009267 GO:0009605 GO:0009856 GO:0009859 GO:0009875 GO:0009893 GO:0009987 GO:0009991 GO:0010562 GO:0010604 GO:0016043 GO:0016301 GO:0016310 GO:0016559 GO:0016740 GO:0016772 GO:0016773 GO:0019207 GO:0019209 GO:0019220 GO:0019222 GO:0019538 GO:0019887 GO:0022414 GO:0030234 GO:0030295 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031667 GO:0031668 GO:0031669 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0033554 GO:0033674 GO:0036211 GO:0042044 GO:0042149 GO:0042325 GO:0042327 GO:0042594 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044706 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048285 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051704 GO:0051716 GO:0060255 GO:0065007 GO:0065009 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0098772 GO:0140096 GO:1901564 GO:2000377
KEGG Pathways
Metabolic & Signaling
ko04068 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 map04068 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410
Pfam Domains
Protein Families
AMPK1_CBM CBS

Protein Analysis

1178

Amino Acids

131.19

Weight (kDa)

8.79

Isoelectric Point (pI)

64.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIX_2 PF16987 4 - 78 3.7e-18 KIX domain
Med15_C PF21539 1081 - 1147 1.1e-06 ARC105/Med15 mediator subunit C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 687
AarI CACCTGC 3 cut(s) 442, 1708, 3013
Acc36I ACCTGC 5 cut(s) 442, 616, 682, 1708, 3013
AccB1I GGYRCC 2 cut(s) 430, 3500
AccB7I CCANNNNNTGG 1 cut(s) 15
AccII CGCG 1 cut(s) 2164
AccIII TCCGGA 2 cut(s) 985, 3378
AciI CCGC 6 cut(s) 140, 473, 589, 2495, 3066, 3443
AclWI GGATC 5 cut(s) 98, 238, 641, 873, 3345
AcsI RAATTY 8 cut(s) 146, 1506, 1655, 2020, 2050, 2362, 2499, 2986
AcyI GRCGYC 1 cut(s) 2708
AdeI CACNNNGTG 1 cut(s) 2612
AfaI GTAC 7 cut(s) 88, 744, 1036, 1218, 2194, 2292, 2716
AfiI CCNNNNNNNGG 7 cut(s) 15, 278, 1247, 1412, 1449, 2495, 3171
AflIII ACRYGT 1 cut(s) 1021
AgeI ACCGGT 1 cut(s) 2325
AjnI CCWGG 5 cut(s) 2070, 2533, 2617, 2864, 3503
AjuI GAANNNNNNNTTGG 4 cut(s) 798, 830, 2865, 2897
Alw21I GWGCWC 6 cut(s) 993, 1232, 1491, 1815, 2617, 3290
Alw26I GTCTC 2 cut(s) 351, 3110
Alw44I GTGCAC 2 cut(s) 1811, 2613
AlwI GGATC 5 cut(s) 98, 238, 641, 873, 3345
AlwNI CAGNNNCTG 2 cut(s) 15, 3253
Ama87I CYCGRG 1 cut(s) 2489
Aor13HI TCCGGA 2 cut(s) 985, 3378
AoxI GGCC 2 cut(s) 313, 1194
ApaLI GTGCAC 2 cut(s) 1811, 2613
ApoI RAATTY 8 cut(s) 146, 1506, 1655, 2020, 2050, 2362, 2499, 2986
ArsI GACNNNNNNTTYG 2 cut(s) 3341, 3373
AseI ATTAAT 1 cut(s) 998
AsiGI ACCGGT 1 cut(s) 2325
Asp700I GAANNNNTTC 1 cut(s) 3222
AspLEI GCGC 1 cut(s) 2149
AspS9I GGNCC 4 cut(s) 441, 1195, 1433, 2780
AsuC2I CCSGG 1 cut(s) 1414
AvaI CYCGRG 1 cut(s) 2489
AvaII GGWCC 3 cut(s) 441, 1433, 2780
BaeGI GKGCMC 4 cut(s) 1683, 1815, 2617, 3439
BanI GGYRCC 2 cut(s) 430, 3500
BanII GRGCYC 2 cut(s) 1232, 1491
BarI GAAGNNNNNNTAC 2 cut(s) 79, 111
BbsI GAAGAC 1 cut(s) 3516
Bbv12I GWGCWC 6 cut(s) 993, 1232, 1491, 1815, 2617, 3290
BbvCI CCTCAGC 2 cut(s) 651, 3136
BccI CCATC 6 cut(s) 211, 724, 2636, 3104, 3133, 3146
BceAI ACGGC 2 cut(s) 3041, 3179
BciT130I CCWGG 5 cut(s) 2072, 2535, 2619, 2866, 3505
BciVI GTATCC 1 cut(s) 522
BclI TGATCA 2 cut(s) 340, 3331
BcnI CCSGG 1 cut(s) 1414
BcoDI GTCTC 2 cut(s) 351, 3110
BfaI CTAG 5 cut(s) 299, 1179, 2156, 2346, 2802
BfmI CTRYAG 4 cut(s) 1145, 2312, 3189, 3525
BfuAI ACCTGC 5 cut(s) 442, 616, 682, 1708, 3013
BfuI GTATCC 1 cut(s) 522
BglII AGATCT 1 cut(s) 2798
BlpI GCTNAGC 1 cut(s) 2658
Bme1390I CCNGG 6 cut(s) 1414, 2072, 2535, 2619, 2866, 3505
Bme18I GGWCC 3 cut(s) 441, 1433, 2780
BmeT110I CYCGRG 1 cut(s) 2489
BmgT120I GGNCC 4 cut(s) 441, 1195, 1433, 2780
BmiI GGNNCC 9 cut(s) 432, 1851, 2076, 2511, 2623, 3163, 3383, 3393, 3502
BmrFI CCNGG 6 cut(s) 1414, 2072, 2535, 2619, 2866, 3505
BmsI GCATC 5 cut(s) 700, 1273, 1383, 1568, 2329
BoxI GACNNNNGTC 3 cut(s) 446, 1541, 2158
BpiI GAAGAC 1 cut(s) 3516
BpmI CTGGAG 4 cut(s) 37, 157, 432, 1772
Bpu10I CCTNAGC 4 cut(s) 462, 651, 2667, 3136
Bpu1102I GCTNAGC 1 cut(s) 2658
BpuEI CTTGAG 4 cut(s) 333, 1839, 2198, 3056
BpuMI CCSGG 1 cut(s) 1414
BsaAI YACGTR 1 cut(s) 994
BsaBI GATNNNNATC 2 cut(s) 963, 3336
BsaHI GRCGYC 1 cut(s) 2708
BsaJI CCNNGG 4 cut(s) 2079, 2490, 2534, 3504
BsaWI WCCGGW 3 cut(s) 985, 2325, 3378
BsaXI ACNNNNNCTCC 4 cut(s) 583, 613, 1027, 1057
Bsc4I CCNNNNNNNGG 7 cut(s) 15, 278, 1247, 1412, 1449, 2495, 3171
Bse118I RCCGGY 1 cut(s) 2325
Bse1I ACTGG 4 cut(s) 9, 20, 174, 316
Bse3DI GCAATG 3 cut(s) 377, 1124, 1945
Bse8I GATNNNNATC 2 cut(s) 963, 3336
BseAI TCCGGA 2 cut(s) 985, 3378
BseBI CCWGG 5 cut(s) 2072, 2535, 2619, 2866, 3505
BseDI CCNNGG 4 cut(s) 2079, 2490, 2534, 3504
BseGI GGATG 3 cut(s) 235, 584, 801
BseJI GATNNNNATC 2 cut(s) 963, 3336
BseLI CCNNNNNNNGG 7 cut(s) 15, 278, 1247, 1412, 1449, 2495, 3171
BseMI GCAATG 3 cut(s) 377, 1124, 1945
BseNI ACTGG 4 cut(s) 9, 20, 174, 316
BseRI GAGGAG 6 cut(s) 591, 777, 801, 1499, 1842, 3489
BseSI GKGCMC 4 cut(s) 1683, 1815, 2617, 3439
BseYI CCCAGC 1 cut(s) 1717
BsgI GTGCAG 1 cut(s) 420
Bsh1236I CGCG 1 cut(s) 2164
BshFI GGCC 2 cut(s) 315, 1196
BshNI GGYRCC 2 cut(s) 430, 3500
BshTI ACCGGT 1 cut(s) 2325
BsiHKAI GWGCWC 6 cut(s) 993, 1232, 1491, 1815, 2617, 3290
BsiHKCI CYCGRG 1 cut(s) 2489
BsiSI CCGG 4 cut(s) 986, 1413, 2326, 3379
BslFI GGGAC 1 cut(s) 3440
BslI CCNNNNNNNGG 7 cut(s) 15, 278, 1247, 1412, 1449, 2495, 3171
BsmAI GTCTC 2 cut(s) 351, 3110
BsmFI GGGAC 1 cut(s) 3440
BsmI GAATGC 3 cut(s) 373, 2176, 2656
BsnI GGCC 2 cut(s) 315, 1196
BsoBI CYCGRG 1 cut(s) 2489
Bsp1286I GDGCHC 8 cut(s) 993, 1232, 1491, 1683, 1815, 2617, 3290, 3439
Bsp13I TCCGGA 2 cut(s) 985, 3378
Bsp1407I TGTACA 1 cut(s) 2714
Bsp1720I GCTNAGC 1 cut(s) 2658
BspACI CCGC 6 cut(s) 140, 473, 589, 2495, 3066, 3443
BspANI GGCC 2 cut(s) 315, 1196
BspEI TCCGGA 2 cut(s) 985, 3378
BspFNI CGCG 1 cut(s) 2164
BspLI GGNNCC 9 cut(s) 432, 1851, 2076, 2511, 2623, 3163, 3383, 3393, 3502
BspMAI CTGCAG 2 cut(s) 2316, 3529
BspMI ACCTGC 5 cut(s) 442, 616, 682, 1708, 3013
BspPI GGATC 5 cut(s) 98, 238, 641, 873, 3345
BspT107I GGYRCC 2 cut(s) 430, 3500
BsrDI GCAATG 3 cut(s) 377, 1124, 1945
BsrFI RCCGGY 1 cut(s) 2325
BsrGI TGTACA 1 cut(s) 2714
BsrI ACTGG 4 cut(s) 9, 20, 174, 316
BssAI RCCGGY 1 cut(s) 2325
BssECI CCNNGG 4 cut(s) 2079, 2490, 2534, 3504
BssNI GRCGYC 1 cut(s) 2708
Bst2UI CCWGG 5 cut(s) 2072, 2535, 2619, 2866, 3505
Bst4CI ACNGT 7 cut(s) 208, 448, 1651, 1911, 2005, 2881, 3094
Bst6I CTCTTC 1 cut(s) 819
BstACI GRCGYC 1 cut(s) 2708
BstAPI GCANNNNNTGC 5 cut(s) 379, 1402, 1819, 2311, 2612
BstAUI TGTACA 1 cut(s) 2714
BstBAI YACGTR 1 cut(s) 994
BstC8I GCNNGC 6 cut(s) 860, 1076, 1262, 1705, 1776, 3240
BstEII GGTNACC 1 cut(s) 2328
BstF5I GGATG 3 cut(s) 235, 584, 801
BstFNI CGCG 1 cut(s) 2164
BstHHI GCGC 1 cut(s) 2149
BstMAI GTCTC 2 cut(s) 351, 3110
BstNI CCWGG 5 cut(s) 2072, 2535, 2619, 2866, 3505
BstNSI RCATGY 6 cut(s) 408, 839, 1025, 1642, 1869, 2209
BstPAI GACNNNNGTC 3 cut(s) 446, 1541, 2158
BstPI GGTNACC 1 cut(s) 2328
BstSCI CCNGG 6 cut(s) 1412, 2070, 2533, 2617, 2864, 3503
BstSFI CTRYAG 4 cut(s) 1145, 2312, 3189, 3525
BstSLI GKGCMC 4 cut(s) 1683, 1815, 2617, 3439
BstUI CGCG 1 cut(s) 2164
BstV2I GAAGAC 1 cut(s) 3516
BstX2I RGATCY 3 cut(s) 103, 2798, 3337
BstYI RGATCY 3 cut(s) 103, 2798, 3337
BsuI GTATCC 1 cut(s) 522
BsuRI GGCC 2 cut(s) 315, 1196
BtgZI GCGATG 1 cut(s) 3169
BtsCI GGATG 3 cut(s) 235, 584, 801
BveI ACCTGC 5 cut(s) 442, 616, 682, 1708, 3013
Cac8I GCNNGC 6 cut(s) 860, 1076, 1262, 1705, 1776, 3240
CaiI CAGNNNCTG 2 cut(s) 15, 3253
CfoI GCGC 1 cut(s) 2149
Cfr10I RCCGGY 1 cut(s) 2325
Cfr13I GGNCC 4 cut(s) 441, 1195, 1433, 2780
CseI GACGC 2 cut(s) 2697, 2891
CsiI ACCWGGT 1 cut(s) 2070
Csp6I GTAC 7 cut(s) 87, 743, 1035, 1217, 2193, 2291, 2715
CspAI ACCGGT 1 cut(s) 2325
CviQI GTAC 7 cut(s) 87, 743, 1035, 1217, 2193, 2291, 2715
DraI TTTAAA 3 cut(s) 883, 1512, 2092
DraIII CACNNNGTG 1 cut(s) 2612
Eam1104I CTCTTC 1 cut(s) 819
EarI CTCTTC 1 cut(s) 819
Ecl136II GAGCTC 2 cut(s) 1230, 1489
Eco24I GRGCYC 2 cut(s) 1232, 1491
Eco32I GATATC 1 cut(s) 73
Eco47I GGWCC 3 cut(s) 441, 1433, 2780
Eco53kI GAGCTC 2 cut(s) 1230, 1489
Eco88I CYCGRG 1 cut(s) 2489
Eco91I GGTNACC 1 cut(s) 2328
EcoICRI GAGCTC 2 cut(s) 1230, 1489
EcoO65I GGTNACC 1 cut(s) 2328
EcoRII CCWGG 5 cut(s) 2070, 2533, 2617, 2864, 3503
EcoRV GATATC 1 cut(s) 73
EcoT22I ATGCAT 2 cut(s) 725, 1644
EcoT38I GRGCYC 2 cut(s) 1232, 1491
FalI AAGNNNNNCTT 2 cut(s) 798, 830
FaqI GGGAC 1 cut(s) 3440
FauI CCCGC 3 cut(s) 480, 596, 2488
FbaI TGATCA 2 cut(s) 340, 3331
FokI GGATG 3 cut(s) 222, 571, 788
FriOI GRGCYC 2 cut(s) 1232, 1491
FspBI CTAG 5 cut(s) 299, 1179, 2156, 2346, 2802
GlaI GCGC 1 cut(s) 2148
GsaI CCCAGC 1 cut(s) 1721
GsuI CTGGAG 4 cut(s) 37, 157, 432, 1772
HaeIII GGCC 2 cut(s) 315, 1196
HapII CCGG 4 cut(s) 986, 1413, 2326, 3379
HgaI GACGC 2 cut(s) 2697, 2891
HhaI GCGC 1 cut(s) 2149
Hin1I GRCGYC 1 cut(s) 2708
Hin6I GCGC 1 cut(s) 2147
HinP1I GCGC 1 cut(s) 2147
HincII GTYRAC 3 cut(s) 1041, 2600, 2701
HindII GTYRAC 3 cut(s) 1041, 2600, 2701
HindIII AAGCTT 3 cut(s) 62, 2185, 3481
HpaI GTTAAC 1 cut(s) 2701
HpaII CCGG 4 cut(s) 986, 1413, 2326, 3379
Hpy99I CGWCG 2 cut(s) 2019, 2713
HpyAV CCTTC 9 cut(s) 105, 193, 1238, 1492, 1760, 1812, 2397, 3152, 3190
HpyCH4III ACNGT 7 cut(s) 208, 448, 1651, 1911, 2005, 2881, 3094
HpyCH4IV ACGT 5 cut(s) 85, 387, 993, 1037, 3429
HpySE526I ACGT 5 cut(s) 85, 387, 993, 1037, 3429
Hsp92I GRCGYC 1 cut(s) 2708
HspAI GCGC 1 cut(s) 2147
Kpn2I TCCGGA 2 cut(s) 985, 3378
Ksp22I TGATCA 2 cut(s) 340, 3331
KspAI GTTAAC 1 cut(s) 2701
LweI GCATC 5 cut(s) 700, 1273, 1383, 1568, 2329
MabI ACCWGGT 1 cut(s) 2070
MaeI CTAG 5 cut(s) 299, 1179, 2156, 2346, 2802
MaeII ACGT 5 cut(s) 85, 387, 993, 1037, 3429
MfeI CAATTG 2 cut(s) 321, 1235
MflI RGATCY 3 cut(s) 103, 2798, 3337
MhlI GDGCHC 8 cut(s) 993, 1232, 1491, 1683, 1815, 2617, 3290, 3439
MlyI GAGTC 6 cut(s) 164, 1036, 2093, 2168, 2189, 2993
MmeI TCCRAC 1 cut(s) 2863
Mph1103I ATGCAT 2 cut(s) 725, 1644
MroI TCCGGA 2 cut(s) 985, 3378
MroXI GAANNNNTTC 1 cut(s) 3222
MslI CAYNNNNRTG 2 cut(s) 240, 1938
MspA1I CMGCKG 1 cut(s) 3530
MspI CCGG 4 cut(s) 986, 1413, 2326, 3379
MspR9I CCNGG 6 cut(s) 1414, 2072, 2535, 2619, 2866, 3505
MunI CAATTG 2 cut(s) 321, 1235
Mva1269I GAATGC 3 cut(s) 373, 2176, 2656
MvaI CCWGG 5 cut(s) 2072, 2535, 2619, 2866, 3505
MvnI CGCG 1 cut(s) 2164
NciI CCSGG 1 cut(s) 1414
NlaIV GGNNCC 9 cut(s) 432, 1851, 2076, 2511, 2623, 3163, 3383, 3393, 3502
NmeAIII GCCGAG 1 cut(s) 2684
NsiI ATGCAT 2 cut(s) 725, 1644
NspI RCATGY 6 cut(s) 408, 839, 1025, 1642, 1869, 2209
PaqCI CACCTGC 3 cut(s) 442, 1708, 3013
PciI ACATGT 1 cut(s) 1021
PcsI WCGNNNNNNNCGW 1 cut(s) 3192
PctI GAATGC 3 cut(s) 373, 2176, 2656
PdmI GAANNNNTTC 1 cut(s) 3222
PflMI CCANNNNNTGG 1 cut(s) 15
PfoI TCCNGGA 1 cut(s) 1412
PinAI ACCGGT 1 cut(s) 2325
PleI GAGTC 6 cut(s) 164, 1036, 2092, 2167, 2188, 2993
PpsI GAGTC 6 cut(s) 164, 1036, 2092, 2167, 2188, 2993
Ppu21I YACGTR 1 cut(s) 994
PscI ACATGT 1 cut(s) 1021
PshAI GACNNNNGTC 3 cut(s) 446, 1541, 2158
PshBI ATTAAT 1 cut(s) 998
PsiI TTATAA 1 cut(s) 687
Psp124BI GAGCTC 2 cut(s) 1232, 1491
Psp6I CCWGG 5 cut(s) 2070, 2533, 2617, 2864, 3503
PspEI GGTNACC 1 cut(s) 2328
PspFI CCCAGC 1 cut(s) 1717
PspGI CCWGG 5 cut(s) 2070, 2533, 2617, 2864, 3503
PspN4I GGNNCC 9 cut(s) 432, 1851, 2076, 2511, 2623, 3163, 3383, 3393, 3502
PspPI GGNCC 4 cut(s) 441, 1195, 1433, 2780
PsrI GAACNNNNNNTAC 4 cut(s) 1159, 1191, 2058, 2090
PstI CTGCAG 2 cut(s) 2316, 3529
PstNI CAGNNNCTG 2 cut(s) 15, 3253
PsuI RGATCY 3 cut(s) 103, 2798, 3337
PvuII CAGCTG 1 cut(s) 3530
RsaI GTAC 7 cut(s) 88, 744, 1036, 1218, 2194, 2292, 2716
RsaNI GTAC 7 cut(s) 87, 743, 1035, 1217, 2193, 2291, 2715
RseI CAYNNNNRTG 2 cut(s) 240, 1938
SacI GAGCTC 2 cut(s) 1232, 1491
Sau96I GGNCC 4 cut(s) 441, 1195, 1433, 2780
SchI GAGTC 6 cut(s) 164, 1036, 2093, 2168, 2189, 2993
ScrFI CCNGG 6 cut(s) 1414, 2072, 2535, 2619, 2866, 3505
SduI GDGCHC 8 cut(s) 993, 1232, 1491, 1683, 1815, 2617, 3290, 3439
SexAI ACCWGGT 1 cut(s) 2070
SfaNI GCATC 5 cut(s) 700, 1273, 1383, 1568, 2329
SfcI CTRYAG 4 cut(s) 1145, 2312, 3189, 3525
SinI GGWCC 3 cut(s) 441, 1433, 2780
SmiMI CAYNNNNRTG 2 cut(s) 240, 1938
SmlI CTYRAG 4 cut(s) 348, 1854, 2177, 3035
SmoI CTYRAG 4 cut(s) 348, 1854, 2177, 3035
SsiI CCGC 6 cut(s) 140, 473, 589, 2495, 3066, 3443
SspI AATATT 4 cut(s) 400, 1523, 1758, 2590
SspMI CTAG 5 cut(s) 299, 1179, 2156, 2346, 2802
SstI GAGCTC 2 cut(s) 1232, 1491
StyD4I CCNGG 6 cut(s) 1412, 2070, 2533, 2617, 2864, 3503
TaaI ACNGT 7 cut(s) 208, 448, 1651, 1911, 2005, 2881, 3094
TaiI ACGT 5 cut(s) 88, 390, 996, 1040, 3432
TaqI TCGA 4 cut(s) 150, 1545, 3150, 3359
TaqII GACCGA 1 cut(s) 787
TatI WGTACW 4 cut(s) 742, 2192, 2290, 2714
TspGWI ACGGA 4 cut(s) 94, 454, 2032, 3404
Van91I CCANNNNNTGG 1 cut(s) 15
VneI GTGCAC 2 cut(s) 1811, 2613
VpaK11BI GGWCC 3 cut(s) 441, 1433, 2780
VspI ATTAAT 1 cut(s) 998
XapI RAATTY 8 cut(s) 146, 1506, 1655, 2020, 2050, 2362, 2499, 2986
XbaI TCTAGA 1 cut(s) 2801
XceI RCATGY 6 cut(s) 408, 839, 1025, 1642, 1869, 2209
XmnI GAANNNNTTC 1 cut(s) 3222
XspI CTAG 5 cut(s) 299, 1179, 2156, 2346, 2802
Zsp2I ATGCAT 2 cut(s) 725, 1644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.