Shugoshin C terminus
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g05360 FvH4_7g18390 FvH4_7g18390 FvH4_7g18390 FvH4_7g18390 FvH4_7g18390 |
| malus_domestica | MD01G1100300.v1.1 MD07G1167400.v1.1 |
| prunus_persica | Prupe.2G206000_v2.0.a1 Prupe.2G206000_v2.0.a1 |
| pyrus_communis | pycom01g12740 pycom07g16220 |
| rosa_chinensis | RchiOBHm_Chr1g0362201 |
| rosa_laevigata | RLG00000027667 |
| rosa_multiflora | Rmu_sc0001237.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00294440 |
| rosa_rugosa | Rorug01G0295400 Rorug01G0295500 |
| rosa_samantha | Rh1AG305000 Rh1BG267800 Rh1CG286000 Rh1DG297800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 125 |
| AccB1I | GGYRCC | 1 cut(s) | 472 |
| AccBSI | CCGCTC | 1 cut(s) | 60 |
| AccI | GTMKAC | 2 cut(s) | 90, 876 |
| AccII | CGCG | 6 cut(s) | 27, 32, 126, 206, 327, 337 |
| AcoI | YGGCCR | 1 cut(s) | 12 |
| AcsI | RAATTY | 2 cut(s) | 824, 1033 |
| AcuI | CTGAAG | 2 cut(s) | 695, 1035 |
| AfaI | GTAC | 1 cut(s) | 675 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 115, 205, 331, 358, 725 |
| AgsI | TTSAA | 2 cut(s) | 433, 1038 |
| AhlI | ACTAGT | 1 cut(s) | 896 |
| AjnI | CCWGG | 1 cut(s) | 910 |
| AluBI | AGCT | 6 cut(s) | 396, 632, 644, 869, 1013, 1022 |
| AluI | AGCT | 6 cut(s) | 396, 632, 644, 869, 1013, 1022 |
| Alw21I | GWGCWC | 1 cut(s) | 273 |
| Alw26I | GTCTC | 1 cut(s) | 614 |
| Alw44I | GTGCAC | 1 cut(s) | 269 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 917 |
| Ama87I | CYCGRG | 2 cut(s) | 77, 566 |
| AoxI | GGCC | 5 cut(s) | 12, 98, 342, 578, 740 |
| ApaLI | GTGCAC | 1 cut(s) | 269 |
| ApeKI | GCWGC | 8 cut(s) | 257, 692, 695, 793, 917, 998, 1010, 1019 |
| ApoI | RAATTY | 2 cut(s) | 824, 1033 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 359, 391 |
| AspLEI | GCGC | 6 cut(s) | 29, 34, 329, 337, 351, 917 |
| AspS9I | GGNCC | 5 cut(s) | 98, 118, 208, 342, 740 |
| AsuC2I | CCSGG | 1 cut(s) | 116 |
| AsuHPI | GGTGA | 5 cut(s) | 121, 127, 166, 175, 433 |
| AvaI | CYCGRG | 2 cut(s) | 77, 566 |
| AvaII | GGWCC | 2 cut(s) | 118, 208 |
| BaeGI | GKGCMC | 2 cut(s) | 273, 475 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 405, 438 |
| BanI | GGYRCC | 1 cut(s) | 472 |
| BanII | GRGCYC | 1 cut(s) | 116 |
| Bbv12I | GWGCWC | 1 cut(s) | 273 |
| BbvI | GCAGC | 8 cut(s) | 244, 679, 707, 805, 904, 985, 1022, 1031 |
| BccI | CCATC | 4 cut(s) | 179, 256, 520, 950 |
| BceAI | ACGGC | 2 cut(s) | 2, 109 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 239, 250, 273, 284 |
| BciT130I | CCWGG | 1 cut(s) | 912 |
| BcnI | CCSGG | 1 cut(s) | 116 |
| BcoDI | GTCTC | 1 cut(s) | 614 |
| BcuI | ACTAGT | 1 cut(s) | 896 |
| BfaI | CTAG | 4 cut(s) | 393, 600, 764, 897 |
| BfmI | CTRYAG | 1 cut(s) | 693 |
| BfoI | RGCGCY | 2 cut(s) | 352, 918 |
| Bme1390I | CCNGG | 2 cut(s) | 116, 912 |
| Bme18I | GGWCC | 2 cut(s) | 118, 208 |
| BmeT110I | CYCGRG | 2 cut(s) | 77, 566 |
| BmgT120I | GGNCC | 5 cut(s) | 98, 118, 208, 342, 740 |
| BmiI | GGNNCC | 2 cut(s) | 343, 474 |
| BmrFI | CCNGG | 2 cut(s) | 116, 912 |
| BmsI | GCATC | 4 cut(s) | 300, 439, 780, 1010 |
| BpuEI | CTTGAG | 1 cut(s) | 567 |
| BpuMI | CCSGG | 1 cut(s) | 116 |
| Bsa29I | ATCGAT | 1 cut(s) | 411 |
| BsaJI | CCNNGG | 5 cut(s) | 177, 204, 240, 810, 910 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 185, 203, 215, 233 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 115, 205, 331, 358, 725 |
| Bse3DI | GCAATG | 1 cut(s) | 234 |
| BseBI | CCWGG | 1 cut(s) | 912 |
| BseCI | ATCGAT | 1 cut(s) | 411 |
| BseDI | CCNNGG | 5 cut(s) | 177, 204, 240, 810, 910 |
| BseGI | GGATG | 3 cut(s) | 54, 72, 454 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 115, 205, 331, 358, 725 |
| BseMI | GCAATG | 1 cut(s) | 234 |
| BseMII | CTCAG | 1 cut(s) | 1014 |
| BseSI | GKGCMC | 2 cut(s) | 273, 475 |
| BseXI | GCAGC | 8 cut(s) | 244, 679, 707, 805, 904, 985, 1022, 1031 |
| BseYI | CCCAGC | 1 cut(s) | 644 |
| Bsh1236I | CGCG | 6 cut(s) | 27, 32, 126, 206, 327, 337 |
| BshFI | GGCC | 5 cut(s) | 14, 100, 344, 580, 742 |
| BshNI | GGYRCC | 1 cut(s) | 472 |
| BshVI | ATCGAT | 1 cut(s) | 411 |
| BsiHKAI | GWGCWC | 1 cut(s) | 273 |
| BsiHKCI | CYCGRG | 2 cut(s) | 77, 566 |
| BsiSI | CCGG | 3 cut(s) | 48, 116, 225 |
| BslFI | GGGAC | 3 cut(s) | 91, 380, 552 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 115, 205, 331, 358, 725 |
| BsmAI | GTCTC | 1 cut(s) | 614 |
| BsmFI | GGGAC | 3 cut(s) | 91, 380, 552 |
| BsmI | GAATGC | 1 cut(s) | 5 |
| BsnI | GGCC | 5 cut(s) | 14, 100, 344, 580, 742 |
| BsoBI | CYCGRG | 2 cut(s) | 77, 566 |
| Bsp1286I | GDGCHC | 3 cut(s) | 116, 273, 475 |
| Bsp143I | GATC | 1 cut(s) | 775 |
| Bsp19I | CCATGG | 1 cut(s) | 177 |
| BspANI | GGCC | 5 cut(s) | 14, 100, 344, 580, 742 |
| BspCNI | CTCAG | 1 cut(s) | 1015 |
| BspDI | ATCGAT | 1 cut(s) | 411 |
| BspFNI | CGCG | 6 cut(s) | 27, 32, 126, 206, 327, 337 |
| BspLI | GGNNCC | 2 cut(s) | 343, 474 |
| BspMAI | CTGCAG | 1 cut(s) | 697 |
| BspQI | GCTCTTC | 1 cut(s) | 714 |
| BspT107I | GGYRCC | 1 cut(s) | 472 |
| BsrBI | CCGCTC | 1 cut(s) | 60 |
| BsrDI | GCAATG | 1 cut(s) | 234 |
| BssECI | CCNNGG | 5 cut(s) | 177, 204, 240, 810, 910 |
| BssMI | GATC | 1 cut(s) | 775 |
| BssT1I | CCWWGG | 3 cut(s) | 177, 240, 810 |
| Bst2UI | CCWGG | 1 cut(s) | 912 |
| Bst4CI | ACNGT | 3 cut(s) | 88, 133, 275 |
| Bst6I | CTCTTC | 1 cut(s) | 714 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 704 |
| BstC8I | GCNNGC | 2 cut(s) | 98, 353 |
| BstDEI | CTNAG | 1 cut(s) | 1023 |
| BstDSI | CCRYGG | 2 cut(s) | 177, 204 |
| BstEII | GGTNACC | 2 cut(s) | 181, 814 |
| BstF5I | GGATG | 3 cut(s) | 54, 72, 454 |
| BstFNI | CGCG | 6 cut(s) | 27, 32, 126, 206, 327, 337 |
| BstH2I | RGCGCY | 2 cut(s) | 352, 918 |
| BstHHI | GCGC | 6 cut(s) | 29, 34, 329, 337, 351, 917 |
| BstKTI | GATC | 1 cut(s) | 778 |
| BstMAI | GTCTC | 1 cut(s) | 614 |
| BstMBI | GATC | 1 cut(s) | 775 |
| BstNI | CCWGG | 1 cut(s) | 912 |
| BstNSI | RCATGY | 1 cut(s) | 536 |
| BstPI | GGTNACC | 2 cut(s) | 181, 814 |
| BstSCI | CCNGG | 2 cut(s) | 114, 910 |
| BstSFI | CTRYAG | 1 cut(s) | 693 |
| BstSLI | GKGCMC | 2 cut(s) | 273, 475 |
| BstUI | CGCG | 6 cut(s) | 27, 32, 126, 206, 327, 337 |
| BstV1I | GCAGC | 8 cut(s) | 244, 679, 707, 805, 904, 985, 1022, 1031 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 178 |
| Bsu15I | ATCGAT | 1 cut(s) | 411 |
| BsuRI | GGCC | 5 cut(s) | 14, 100, 344, 580, 742 |
| BsuTUI | ATCGAT | 1 cut(s) | 411 |
| BtgI | CCRYGG | 2 cut(s) | 177, 204 |
| BtgZI | GCGATG | 1 cut(s) | 275 |
| BtsCI | GGATG | 3 cut(s) | 54, 72, 454 |
| BtsI | GCAGTG | 2 cut(s) | 319, 757 |
| BtsIMutI | CAGTG | 2 cut(s) | 319, 757 |
| Cac8I | GCNNGC | 2 cut(s) | 98, 353 |
| CaiI | CAGNNNCTG | 1 cut(s) | 917 |
| CfoI | GCGC | 6 cut(s) | 29, 34, 329, 337, 351, 917 |
| Cfr13I | GGNCC | 5 cut(s) | 98, 118, 208, 342, 740 |
| Cfr42I | CCGCGG | 1 cut(s) | 207 |
| ClaI | ATCGAT | 1 cut(s) | 411 |
| CpoI | CGGWCCG | 1 cut(s) | 118 |
| CseI | GACGC | 1 cut(s) | 115 |
| Csp6I | GTAC | 1 cut(s) | 674 |
| CspI | CGGWCCG | 1 cut(s) | 118 |
| CviAII | CATG | 6 cut(s) | 10, 64, 178, 533, 773, 806 |
| CviQI | GTAC | 1 cut(s) | 674 |
| DdeI | CTNAG | 1 cut(s) | 1023 |
| DpnI | GATC | 1 cut(s) | 777 |
| DpnII | GATC | 1 cut(s) | 775 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 125 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 125 |
| EaeI | YGGCCR | 1 cut(s) | 12 |
| Eam1104I | CTCTTC | 1 cut(s) | 714 |
| EarI | CTCTTC | 1 cut(s) | 714 |
| EciI | GGCGGA | 1 cut(s) | 211 |
| Eco130I | CCWWGG | 3 cut(s) | 177, 240, 810 |
| Eco147I | AGGCCT | 1 cut(s) | 580 |
| Eco24I | GRGCYC | 1 cut(s) | 116 |
| Eco47I | GGWCC | 2 cut(s) | 118, 208 |
| Eco57I | CTGAAG | 2 cut(s) | 695, 1035 |
| Eco88I | CYCGRG | 2 cut(s) | 77, 566 |
| Eco91I | GGTNACC | 2 cut(s) | 181, 814 |
| EcoO109I | RGGNCCY | 1 cut(s) | 740 |
| EcoO65I | GGTNACC | 2 cut(s) | 181, 814 |
| EcoRII | CCWGG | 1 cut(s) | 910 |
| EcoT14I | CCWWGG | 3 cut(s) | 177, 240, 810 |
| EcoT38I | GRGCYC | 1 cut(s) | 116 |
| ErhI | CCWWGG | 3 cut(s) | 177, 240, 810 |
| FaeI | CATG | 6 cut(s) | 13, 67, 181, 536, 776, 809 |
| FaiI | YATR | 9 cut(s) | 11, 65, 179, 279, 296, 534, 774, 807, 931 |
| FaqI | GGGAC | 3 cut(s) | 91, 380, 552 |
| FatI | CATG | 6 cut(s) | 9, 63, 177, 532, 772, 805 |
| FauI | CCCGC | 2 cut(s) | 89, 360 |
| FblI | GTMKAC | 2 cut(s) | 90, 876 |
| FokI | GGATG | 3 cut(s) | 41, 59, 461 |
| FriOI | GRGCYC | 1 cut(s) | 116 |
| FspBI | CTAG | 4 cut(s) | 393, 600, 764, 897 |
| GlaI | GCGC | 6 cut(s) | 28, 33, 328, 336, 350, 916 |
| GsaI | CCCAGC | 1 cut(s) | 648 |
| HaeII | RGCGCY | 2 cut(s) | 352, 918 |
| HaeIII | GGCC | 5 cut(s) | 14, 100, 344, 580, 742 |
| HapII | CCGG | 3 cut(s) | 48, 116, 225 |
| HgaI | GACGC | 1 cut(s) | 115 |
| HhaI | GCGC | 6 cut(s) | 29, 34, 329, 337, 351, 917 |
| Hin1II | CATG | 6 cut(s) | 13, 67, 181, 536, 776, 809 |
| Hin6I | GCGC | 6 cut(s) | 27, 32, 327, 335, 349, 915 |
| HinP1I | GCGC | 6 cut(s) | 27, 32, 327, 335, 349, 915 |
| HinfI | GANTC | 5 cut(s) | 51, 218, 251, 389, 715 |
| HpaII | CCGG | 3 cut(s) | 48, 116, 225 |
| HphI | GGTGA | 5 cut(s) | 121, 127, 166, 175, 433 |
| Hpy166II | GTNNAC | 8 cut(s) | 91, 211, 271, 319, 674, 755, 769, 877 |
| Hpy188I | TCNGA | 1 cut(s) | 714 |
| Hpy8I | GTNNAC | 8 cut(s) | 91, 211, 271, 319, 674, 755, 769, 877 |
| HpyAV | CCTTC | 5 cut(s) | 427, 431, 458, 486, 582 |
| HpyCH4III | ACNGT | 3 cut(s) | 88, 133, 275 |
| HpyCH4IV | ACGT | 1 cut(s) | 701 |
| HpyCH4V | TGCA | 8 cut(s) | 271, 452, 637, 695, 750, 793, 842, 1001 |
| HpyF3I | CTNAG | 1 cut(s) | 1023 |
| HpySE526I | ACGT | 1 cut(s) | 701 |
| Hsp92II | CATG | 6 cut(s) | 13, 67, 181, 536, 776, 809 |
| HspAI | GCGC | 6 cut(s) | 27, 32, 327, 335, 349, 915 |
| KspI | CCGCGG | 1 cut(s) | 207 |
| Kzo9I | GATC | 1 cut(s) | 775 |
| LguI | GCTCTTC | 1 cut(s) | 714 |
| LmnI | GCTCC | 3 cut(s) | 65, 401, 734 |
| Lsp1109I | GCAGC | 8 cut(s) | 244, 679, 707, 805, 904, 985, 1022, 1031 |
| LweI | GCATC | 4 cut(s) | 300, 439, 780, 1010 |
| MaeI | CTAG | 4 cut(s) | 393, 600, 764, 897 |
| MaeII | ACGT | 1 cut(s) | 701 |
| MaeIII | GTNAC | 6 cut(s) | 127, 133, 181, 814, 892, 972 |
| MalI | GATC | 1 cut(s) | 777 |
| MbiI | CCGCTC | 1 cut(s) | 60 |
| MboI | GATC | 1 cut(s) | 775 |
| MboII | GAAGA | 4 cut(s) | 701, 770, 899, 1039 |
| MfeI | CAATTG | 1 cut(s) | 723 |
| MhlI | GDGCHC | 3 cut(s) | 116, 273, 475 |
| MluCI | AATT | 6 cut(s) | 228, 458, 516, 723, 824, 1033 |
| MlyI | GAGTC | 2 cut(s) | 212, 245 |
| MmeI | TCCRAC | 1 cut(s) | 829 |
| MnlI | CCTC | 8 cut(s) | 211, 224, 299, 417, 434, 474, 502, 591 |
| MseI | TTAA | 2 cut(s) | 939, 965 |
| MslI | CAYNNNNRTG | 2 cut(s) | 176, 276 |
| MspA1I | CMGCKG | 4 cut(s) | 206, 419, 1013, 1022 |
| MspI | CCGG | 3 cut(s) | 48, 116, 225 |
| MspR9I | CCNGG | 2 cut(s) | 116, 912 |
| MteI | GCGCNGCGC | 1 cut(s) | 30 |
| MunI | CAATTG | 1 cut(s) | 723 |
| Mva1269I | GAATGC | 1 cut(s) | 5 |
| MvaI | CCWGG | 1 cut(s) | 912 |
| MvnI | CGCG | 6 cut(s) | 27, 32, 126, 206, 327, 337 |
| NciI | CCSGG | 1 cut(s) | 116 |
| NcoI | CCATGG | 1 cut(s) | 177 |
| NdeII | GATC | 1 cut(s) | 775 |
| NlaIII | CATG | 6 cut(s) | 13, 67, 181, 536, 776, 809 |
| NlaIV | GGNNCC | 2 cut(s) | 343, 474 |
| NmeAIII | GCCGAG | 1 cut(s) | 233 |
| NmuCI | GTSAC | 4 cut(s) | 127, 133, 181, 892 |
| NspI | RCATGY | 1 cut(s) | 536 |
| PceI | AGGCCT | 1 cut(s) | 580 |
| PciSI | GCTCTTC | 1 cut(s) | 714 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 312 |
| PctI | GAATGC | 1 cut(s) | 5 |
| PfeI | GAWTC | 3 cut(s) | 51, 389, 715 |
| PleI | GAGTC | 2 cut(s) | 212, 245 |
| PpsI | GAGTC | 2 cut(s) | 212, 245 |
| Psp6I | CCWGG | 1 cut(s) | 910 |
| PspEI | GGTNACC | 2 cut(s) | 181, 814 |
| PspFI | CCCAGC | 1 cut(s) | 644 |
| PspGI | CCWGG | 1 cut(s) | 910 |
| PspN4I | GGNNCC | 2 cut(s) | 343, 474 |
| PspPI | GGNCC | 5 cut(s) | 98, 118, 208, 342, 740 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 74, 106 |
| PstI | CTGCAG | 1 cut(s) | 697 |
| PstNI | CAGNNNCTG | 1 cut(s) | 917 |
| PvuII | CAGCTG | 2 cut(s) | 1013, 1022 |
| RsaI | GTAC | 1 cut(s) | 675 |
| RsaNI | GTAC | 1 cut(s) | 674 |
| RseI | CAYNNNNRTG | 2 cut(s) | 176, 276 |
| Rsr2I | CGGWCCG | 1 cut(s) | 118 |
| RsrII | CGGWCCG | 1 cut(s) | 118 |
| SacII | CCGCGG | 1 cut(s) | 207 |
| SapI | GCTCTTC | 1 cut(s) | 714 |
| SaqAI | TTAA | 2 cut(s) | 939, 965 |
| Sau3AI | GATC | 1 cut(s) | 775 |
| Sau96I | GGNCC | 5 cut(s) | 98, 118, 208, 342, 740 |
| SchI | GAGTC | 2 cut(s) | 212, 245 |
| ScrFI | CCNGG | 2 cut(s) | 116, 912 |
| SduI | GDGCHC | 3 cut(s) | 116, 273, 475 |
| SfaNI | GCATC | 4 cut(s) | 300, 439, 780, 1010 |
| SfcI | CTRYAG | 1 cut(s) | 693 |
| Sfr303I | CCGCGG | 1 cut(s) | 207 |
| SgrBI | CCGCGG | 1 cut(s) | 207 |
| SinI | GGWCC | 2 cut(s) | 118, 208 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 176, 276 |
| SmlI | CTYRAG | 1 cut(s) | 582 |
| SmoI | CTYRAG | 1 cut(s) | 582 |
| SpeI | ACTAGT | 1 cut(s) | 896 |
| Sse9I | AATT | 6 cut(s) | 228, 458, 516, 723, 824, 1033 |
| SseBI | AGGCCT | 1 cut(s) | 580 |
| SspMI | CTAG | 4 cut(s) | 393, 600, 764, 897 |
| StuI | AGGCCT | 1 cut(s) | 580 |
| StyD4I | CCNGG | 2 cut(s) | 114, 910 |
| StyI | CCWWGG | 3 cut(s) | 177, 240, 810 |
| TaaI | ACNGT | 3 cut(s) | 88, 133, 275 |
| TaiI | ACGT | 1 cut(s) | 704 |
| TaqI | TCGA | 3 cut(s) | 216, 411, 479 |
| TasI | AATT | 6 cut(s) | 228, 458, 516, 723, 824, 1033 |
| TauI | GCSGC | 7 cut(s) | 17, 32, 126, 327, 494, 692, 1010 |
| TfiI | GAWTC | 3 cut(s) | 51, 389, 715 |
| Tru1I | TTAA | 2 cut(s) | 939, 965 |
| Tru9I | TTAA | 2 cut(s) | 939, 965 |
| TscAI | CASTG | 2 cut(s) | 326, 757 |
| TseFI | GTSAC | 4 cut(s) | 127, 133, 181, 892 |
| TseI | GCWGC | 8 cut(s) | 257, 692, 695, 793, 917, 998, 1010, 1019 |
| Tsp45I | GTSAC | 4 cut(s) | 127, 133, 181, 892 |
| TspRI | CASTG | 2 cut(s) | 326, 757 |
| VneI | GTGCAC | 1 cut(s) | 269 |
| VpaK11BI | GGWCC | 2 cut(s) | 118, 208 |
| XapI | RAATTY | 2 cut(s) | 824, 1033 |
| XceI | RCATGY | 1 cut(s) | 536 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 779 |
| XmiI | GTMKAC | 2 cut(s) | 90, 876 |
| XspI | CTAG | 4 cut(s) | 393, 600, 764, 897 |