Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0007057

Physical Location & Seq

Genomic Coordinates Forward (+)

42630228 .. 42633380

Gene Structure 3153 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0310100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

ATGTCGTCGGCCGGTGTTGCCGCTCTTTCTCCGGTTCACAGTGAGCCGTTGCTCACTGGTGGTAACTGTCCTGCTATGTCGTGTATGTCGTCGAGTGAATCGATTTTGATATACCTGTCTGTTTCGGGATCGACTACTCCTATGAGTGTGTTGGAATCGGATTCGATTGAGTCTGTGAAGCTTAGGATTCAGACATATAAGGGTTTTGTTGTGAAGAAGCAGAAGCTAGTGTGTGGAGGGAGGGAACTGGCTCGGAGTAATTCGATACTAAGGGAATATGGAGTGTCGGATGGGAATGTGATGCATTTGGTTCTTAGGCTGTCTGATCTTCAGGAGATCAATGTTCGAACTAATTGTGGGAAAGAGCTTACGTTCCATGTGGAGCGTGGGAAAGATGTTGGGTATGTAAAGCAGAAGATTGCGAAGAATAGTAAAGAGTTTGTTGATCTAGAGGAGCAGGAAGTTGTGTTGGATGGGAAGCCACTTGAGGATCAGAAGCTTATTGATGACATATGTAAACAGAATGATGGTGTCTTACATTTGTTGGTTCGGAAGTCTGCAAAACTTCGTGCTAGACCTGTTGAGAAGAACTTTGAGTTGTCTATTGTGGCGTCACATGTGGATGATGGGAAAAAAGAAATAGATGGAGAGAATGTGAAGCAGCAATATGATGCTGATGAGCAAGAGTTTAGCAGAGGTTACAAAGTCGATGAGATGATTGTGCCAAGAAAGCCGCCGGATAGAGAATTTGGGTTGGAGCCTGTCATTAACCCCAAGATTGAATTGCCGTCTGTGATCTGGGATATTGTTTATGAAACAGTTGAAGGACTAGAGAGTGGGAATCACCCAATCAGGTCAATGGAGGGTACAGGAGGAGCATATTTTATGTTGGACTCATCTGGGGAAAAGTATGTGTCTGTGTTTAAGCCAATTGATGAGGAGCCTATGGCTGAGAACAATCCAAGAGGGCTTCCATTGTCATTAGATGGGGAAGGATTGAAAAAGGGGACAAGAGTTGGAGAAGGGGCTTTCAGAGAGGTTGCAGCTTACCTTTTGGATCATCCAAAGGGTGGGCGACGTATGTTGTATGGTGATGGGAAAGGCTTTGCTGGAGTTCCACCAACATTCATAGTGAGGTGCTTTCATAGAGGATTCAACAACCCAGAAGATGTAATGGTCAAAATTGGTTCCTTACAGAAGTTCATGGAGAATGATGGAAGTTGTGAGGACATGGGCCCTGGTGCGTTCCCAACTGAGGAAGTGCATAAGGTTTCTGTTTTGGACCTGAGATTGGCCAATGCGGACAGACACGCAGGAAATATCTTGCTGAGCAAAGAGGGTGAAGGTGGCCGGTCTATGCTGATTCCCATTGACCACGGTTACTGCTTGCCCGAAAGCTTTGAAGATGTGACATTCGACTGGCTCTATTGGCCACAAGCACGCAAACCATATGCTGAGGAGGTGGTTGATTACATAAAATCACTGGATGCTGAGGAGGATATTGCCCTTCTGAAGTTCCATGGATGGGAGATGCCACCAAAATGTGCTCGCACACTTCGGATTTCAACCATGCTGCTGAAGAAAGGAGTAGAGAGAGGGCTCACTCCTTTTGACATAGGAAGCATGATGTGCAGAAAAACCTTGAATAAGGAATCCGTGATAGAGGAAATAGTAGAAGAAGCTAACGATTCTGTGCTCCCTGACTCAAGTGAACATGCTTTTCTTGAGACTGTATCCGAAATTATGGATCGCCGTCTTGATGAGATTGCTGGTTCACCTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

594

Amino Acids

65.98

Weight (kDa)

5.08

Isoelectric Point (pI)

45.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ubiquitin	PF00240	39 - 107	7.8e-12	Ubiquitin family
ubiquitin	PF00240	113 - 185	1.5e-09	Ubiquitin family
PI3_PI4_kinase	PF00454	290 - 538	5.5e-46	Phosphatidylinositol 3- and 4-kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007057)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25030 AT4G25030
fragaria_vesca	FvH4_7g19880 FvH4_7g19880
malus_domestica	MD01G1110900.v1.1 MD05G1255700.v1.1 MD07G1177000.v1.1
prunus_persica	Prupe.2G215800_v2.0.a1
pyrus_communis	pycom01g13820 pycom07g17110
rosa_chinensis	RchiOBHm_Chr1g0363861
rosa_laevigata	RLG00000027540
rosa_multiflora	Rmu_co8207472.1_g000001 Rmu_sc0002483.1_g000002 Rmu_sc0041994.1_g000001
rosa_roxburghii	Rroxscaffold_4G00292910
rosa_rugosa	Rorug01G0310000 Rorug01G0310100 Rorug01G0310200 Rorug01G0310300
rosa_samantha	Rh1AG318400 Rh1BG281600 Rh1CG298000 Rh1DG312900
rosa_wichuraiana	Rw1G028260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1070
AccBSI	CCGCTC	1 cut(s)	23
AciI	CCGC	3 cut(s)	21, 734, 1301
AclWI	GGATC	4 cut(s)	136, 498, 1065, 1755
AcoI	YGGCCR	4 cut(s)	9, 1293, 1348, 1430
AcsI	RAATTY	1 cut(s)	746
AcuI	CTGAAG	3 cut(s)	314, 1532, 1598
AcyI	GRCGYC	1 cut(s)	611
AfaI	GTAC	1 cut(s)	868
AfiI	CCNNNNNNNGG	4 cut(s)	1070, 1255, 1291, 1525
AflIII	ACRYGT	1 cut(s)	616
AgsI	TTSAA	7 cut(s)	782, 824, 1000, 1156, 1403, 1566, 1645
AjnI	CCWGG	1 cut(s)	1237
AluBI	AGCT	7 cut(s)	181, 226, 367, 499, 1046, 1398, 1682
AluI	AGCT	7 cut(s)	181, 226, 367, 499, 1046, 1398, 1682
Alw21I	GWGCWC	2 cut(s)	1549, 1698
Alw26I	GTCTC	1 cut(s)	1721
AlwI	GGATC	4 cut(s)	136, 498, 1065, 1755
AoxI	GGCC	5 cut(s)	9, 1234, 1293, 1348, 1430
ApaI	GGGCCC	1 cut(s)	1238
ApeKI	GCWGC	3 cut(s)	661, 1043, 1573
ApoI	RAATTY	1 cut(s)	746
AspS9I	GGNCC	3 cut(s)	1234, 1235, 1282
AsuHPI	GGTGA	4 cut(s)	836, 1103, 1352, 1767
AsuII	TTCGAA	1 cut(s)	346
AvaII	GGWCC	1 cut(s)	1282
BaeGI	GKGCMC	1 cut(s)	1238
BalI	TGGCCA	2 cut(s)	1295, 1432
BanII	GRGCYC	2 cut(s)	1238, 1602
Bbv12I	GWGCWC	2 cut(s)	1549, 1698
BbvCI	CCTCAGC	2 cut(s)	1455, 1491
BbvI	GCAGC	3 cut(s)	673, 1055, 1560
BccI	CCATC	9 cut(s)	284, 467, 521, 620, 638, 980, 1088, 1208, 1518
BceAI	ACGGC	3 cut(s)	31, 772, 1737
BciT130I	CCWGG	1 cut(s)	1239
BciVI	GTATCC	1 cut(s)	1744
BcoDI	GTCTC	1 cut(s)	1721
BfaI	CTAG	4 cut(s)	227, 449, 573, 830
BfuI	GTATCC	1 cut(s)	1744
BisI	GCNGC	5 cut(s)	21, 662, 734, 1044, 1574
BlpI	GCTNAGC	1 cut(s)	1328
BlsI	GCNGC	5 cut(s)	22, 663, 735, 1045, 1575
Bme1390I	CCNGG	1 cut(s)	1239
Bme18I	GGWCC	1 cut(s)	1282
BmgT120I	GGNCC	3 cut(s)	1234, 1235, 1282
BmiI	GGNNCC	4 cut(s)	759, 942, 1189, 1236
BmrFI	CCNGG	1 cut(s)	1239
BmsI	GCATC	4 cut(s)	291, 661, 1477, 1521
BpmI	CTGGAG	1 cut(s)	1131
Bpu10I	CCTNAGC	3 cut(s)	182, 1455, 1491
Bpu1102I	GCTNAGC	1 cut(s)	1328
Bpu14I	TTCGAA	1 cut(s)	346
BpuEI	CTTGAG	3 cut(s)	506, 1690, 1745
Bsa29I	ATCGAT	1 cut(s)	101
BsaHI	GRCGYC	1 cut(s)	611
BsaJI	CCNNGG	3 cut(s)	1237, 1375, 1519
BsaWI	WCCGGW	1 cut(s)	31
BsaXI	ACNNNNNCTCC	2 cut(s)	639, 669
Bsc4I	CCNNNNNNNGG	4 cut(s)	1070, 1255, 1291, 1525
Bse118I	RCCGGY	2 cut(s)	11, 1350
Bse1I	ACTGG	4 cut(s)	61, 252, 1424, 1488
BseBI	CCWGG	1 cut(s)	1239
BseCI	ATCGAT	1 cut(s)	101
BseDI	CCNNGG	3 cut(s)	1237, 1375, 1519
BseGI	GGATG	6 cut(s)	295, 478, 628, 1060, 1492, 1529
BseLI	CCNNNNNNNGG	4 cut(s)	1070, 1255, 1291, 1525
BseMII	CTCAG	6 cut(s)	942, 1245, 1277, 1319, 1446, 1482
BseNI	ACTGG	4 cut(s)	61, 252, 1424, 1488
BseRI	GAGGAG	5 cut(s)	467, 888, 953, 1472, 1508
BseSI	GKGCMC	1 cut(s)	1238
BseX3I	CGGCCG	1 cut(s)	9
BseXI	GCAGC	3 cut(s)	673, 1055, 1560
BsgI	GTGCAG	1 cut(s)	1651
Bsh1285I	CGRYCG	1 cut(s)	12
BshFI	GGCC	5 cut(s)	11, 1236, 1295, 1350, 1432
BshVI	ATCGAT	1 cut(s)	101
BsiEI	CGRYCG	1 cut(s)	12
BsiHKAI	GWGCWC	2 cut(s)	1549, 1698
BsiSI	CCGG	4 cut(s)	12, 32, 737, 1351
BslFI	GGGAC	1 cut(s)	1021
BslI	CCNNNNNNNGG	4 cut(s)	1070, 1255, 1291, 1525
BsmAI	GTCTC	1 cut(s)	1721
BsmFI	GGGAC	1 cut(s)	1021
BsnI	GGCC	5 cut(s)	11, 1236, 1295, 1350, 1432
Bsp119I	TTCGAA	1 cut(s)	346
Bsp120I	GGGCCC	1 cut(s)	1234
Bsp1286I	GDGCHC	4 cut(s)	1238, 1549, 1602, 1698
Bsp143I	GATC	8 cut(s)	128, 325, 336, 445, 490, 795, 1057, 1747
Bsp1720I	GCTNAGC	1 cut(s)	1328
Bsp19I	CCATGG	1 cut(s)	1519
BspACI	CCGC	3 cut(s)	21, 734, 1301
BspANI	GGCC	5 cut(s)	11, 1236, 1295, 1350, 1432
BspCNI	CTCAG	6 cut(s)	943, 1246, 1278, 1320, 1447, 1483
BspDI	ATCGAT	1 cut(s)	101
BspLI	GGNNCC	4 cut(s)	759, 942, 1189, 1236
BspPI	GGATC	4 cut(s)	136, 498, 1065, 1755
BspT104I	TTCGAA	1 cut(s)	346
BsrBI	CCGCTC	1 cut(s)	23
BsrFI	RCCGGY	2 cut(s)	11, 1350
BsrI	ACTGG	4 cut(s)	61, 252, 1424, 1488
BssAI	RCCGGY	2 cut(s)	11, 1350
BssECI	CCNNGG	3 cut(s)	1237, 1375, 1519
BssMI	GATC	8 cut(s)	128, 325, 336, 445, 490, 795, 1057, 1747
BssNI	GRCGYC	1 cut(s)	611
BssT1I	CCWWGG	1 cut(s)	1519
Bst2UI	CCWGG	1 cut(s)	1239
Bst4CI	ACNGT	5 cut(s)	41, 68, 820, 1379, 1732
BstACI	GRCGYC	1 cut(s)	611
BstAPI	GCANNNNNTGC	1 cut(s)	1629
BstBI	TTCGAA	1 cut(s)	346
BstC8I	GCNNGC	3 cut(s)	1388, 1441, 1549
BstDEI	CTNAG	9 cut(s)	182, 269, 314, 951, 1254, 1286, 1328, 1455, 1491
BstDSI	CCRYGG	2 cut(s)	1375, 1519
BstF5I	GGATG	6 cut(s)	295, 478, 628, 1060, 1492, 1529
BstKTI	GATC	8 cut(s)	131, 328, 339, 448, 493, 798, 1060, 1750
BstMAI	GTCTC	1 cut(s)	1721
BstMBI	GATC	8 cut(s)	128, 325, 336, 445, 490, 795, 1057, 1747
BstMCI	CGRYCG	1 cut(s)	12
BstMWI	GCNNNNNNNGC	4 cut(s)	17, 730, 1429, 1629
BstNI	CCWGG	1 cut(s)	1239
BstNSI	RCATGY	2 cut(s)	620, 1718
BstSCI	CCNGG	1 cut(s)	1237
BstSLI	GKGCMC	1 cut(s)	1238
BstV1I	GCAGC	3 cut(s)	673, 1055, 1560
BstZI	CGGCCG	1 cut(s)	9
Bsu15I	ATCGAT	1 cut(s)	101
BsuI	GTATCC	1 cut(s)	1744
BsuRI	GGCC	5 cut(s)	11, 1236, 1295, 1350, 1432
BsuTUI	ATCGAT	1 cut(s)	101
BtgI	CCRYGG	2 cut(s)	1375, 1519
BtsCI	GGATG	6 cut(s)	295, 478, 628, 1060, 1492, 1529
BtsIMutI	CAGTG	3 cut(s)	46, 54, 1481
Cac8I	GCNNGC	3 cut(s)	1388, 1441, 1549
Cfr10I	RCCGGY	2 cut(s)	11, 1350
Cfr13I	GGNCC	3 cut(s)	1234, 1235, 1282
ClaI	ATCGAT	1 cut(s)	101
CseI	GACGC	1 cut(s)	600
Csp6I	GTAC	1 cut(s)	867
CviAII	CATG	8 cut(s)	377, 617, 1204, 1231, 1520, 1570, 1624, 1715
CviQI	GTAC	1 cut(s)	867
DdeI	CTNAG	9 cut(s)	182, 269, 314, 951, 1254, 1286, 1328, 1455, 1491
DpnI	GATC	8 cut(s)	130, 327, 338, 447, 492, 797, 1059, 1749
DpnII	GATC	8 cut(s)	128, 325, 336, 445, 490, 795, 1057, 1747
EaeI	YGGCCR	4 cut(s)	9, 1293, 1348, 1430
EagI	CGGCCG	1 cut(s)	9
EclXI	CGGCCG	1 cut(s)	9
Eco130I	CCWWGG	1 cut(s)	1519
Eco24I	GRGCYC	2 cut(s)	1238, 1602
Eco47I	GGWCC	1 cut(s)	1282
Eco52I	CGGCCG	1 cut(s)	9
Eco57I	CTGAAG	3 cut(s)	314, 1532, 1598
EcoO109I	RGGNCCY	1 cut(s)	1235
EcoRII	CCWGG	1 cut(s)	1237
EcoT14I	CCWWGG	1 cut(s)	1519
EcoT22I	ATGCAT	1 cut(s)	306
EcoT38I	GRGCYC	2 cut(s)	1238, 1602
ErhI	CCWWGG	1 cut(s)	1519
FaeI	CATG	8 cut(s)	380, 620, 1207, 1234, 1523, 1573, 1627, 1718
FaqI	GGGAC	1 cut(s)	1021
FatI	CATG	8 cut(s)	376, 616, 1203, 1230, 1519, 1569, 1623, 1714
FauNDI	CATATG	2 cut(s)	512, 1450
Fnu4HI	GCNGC	5 cut(s)	21, 662, 734, 1044, 1574
FokI	GGATG	6 cut(s)	302, 485, 635, 1047, 1499, 1536
FriOI	GRGCYC	2 cut(s)	1238, 1602
Fsp4HI	GCNGC	5 cut(s)	21, 662, 734, 1044, 1574
FspBI	CTAG	4 cut(s)	227, 449, 573, 830
GluI	GCNGC	5 cut(s)	21, 662, 734, 1044, 1574
GsuI	CTGGAG	1 cut(s)	1131
HaeIII	GGCC	5 cut(s)	11, 1236, 1295, 1350, 1432
HapII	CCGG	4 cut(s)	12, 32, 737, 1351
HgaI	GACGC	1 cut(s)	600
Hin1I	GRCGYC	1 cut(s)	611
Hin1II	CATG	8 cut(s)	380, 620, 1207, 1234, 1523, 1573, 1627, 1718
HindIII	AAGCTT	3 cut(s)	179, 497, 1396
HpaII	CCGG	4 cut(s)	12, 32, 737, 1351
HphI	GGTGA	4 cut(s)	836, 1103, 1352, 1767
Hpy166II	GTNNAC	4 cut(s)	37, 518, 1712, 1775
Hpy188III	TCNNGA	6 cut(s)	126, 332, 449, 1724, 1757, 1782
Hpy8I	GTNNAC	4 cut(s)	37, 518, 1712, 1775
Hpy99I	CGWCG	3 cut(s)	10, 94, 1080
HpyAV	CCTTC	5 cut(s)	818, 986, 1016, 1337, 1517
HpyCH4III	ACNGT	5 cut(s)	41, 68, 820, 1379, 1732
HpyCH4IV	ACGT	2 cut(s)	371, 1078
HpyCH4V	TGCA	5 cut(s)	304, 560, 1043, 1264, 1632
HpyF10VI	GCNNNNNNNGC	4 cut(s)	17, 730, 1429, 1629
HpyF3I	CTNAG	9 cut(s)	182, 269, 314, 951, 1254, 1286, 1328, 1455, 1491
HpySE526I	ACGT	2 cut(s)	371, 1078
Hsp92I	GRCGYC	1 cut(s)	611
Hsp92II	CATG	8 cut(s)	380, 620, 1207, 1234, 1523, 1573, 1627, 1718
Kzo9I	GATC	8 cut(s)	128, 325, 336, 445, 490, 795, 1057, 1747
LmnI	GCTCC	6 cut(s)	382, 454, 757, 875, 940, 1701
Lsp1109I	GCAGC	3 cut(s)	673, 1055, 1560
LweI	GCATC	4 cut(s)	291, 661, 1477, 1521
MaeI	CTAG	4 cut(s)	227, 449, 573, 830
MaeII	ACGT	2 cut(s)	371, 1078
MaeIII	GTNAC	5 cut(s)	62, 612, 698, 1379, 1408
MalI	GATC	8 cut(s)	130, 327, 338, 447, 492, 797, 1059, 1749
MbiI	CCGCTC	1 cut(s)	23
MboI	GATC	8 cut(s)	128, 325, 336, 445, 490, 795, 1057, 1747
MboII	GAAGA	9 cut(s)	226, 320, 427, 436, 598, 1178, 1415, 1591, 1688
MfeI	CAATTG	1 cut(s)	930
MhlI	GDGCHC	4 cut(s)	1238, 1549, 1602, 1698
MlsI	TGGCCA	2 cut(s)	1295, 1432
MluCI	AATT	7 cut(s)	259, 352, 746, 782, 930, 1182, 1740
MluNI	TGGCCA	2 cut(s)	1295, 1432
MlyI	GAGTC	3 cut(s)	179, 887, 1697
MmeI	TCCRAC	6 cut(s)	132, 267, 450, 735, 870, 997
Mox20I	TGGCCA	2 cut(s)	1295, 1432
Mph1103I	ATGCAT	1 cut(s)	306
MscI	TGGCCA	2 cut(s)	1295, 1432
MseI	TTAA	2 cut(s)	768, 924
MslI	CAYNNNNRTG	2 cut(s)	621, 1540
Msp20I	TGGCCA	2 cut(s)	1295, 1432
MspI	CCGG	4 cut(s)	12, 32, 737, 1351
MspR9I	CCNGG	1 cut(s)	1239
MunI	CAATTG	1 cut(s)	930
MvaI	CCWGG	1 cut(s)	1239
MwoI	GCNNNNNNNGC	4 cut(s)	17, 730, 1429, 1629
NcoI	CCATGG	1 cut(s)	1519
NdeI	CATATG	2 cut(s)	512, 1450
NdeII	GATC	8 cut(s)	128, 325, 336, 445, 490, 795, 1057, 1747
NlaIII	CATG	8 cut(s)	380, 620, 1207, 1234, 1523, 1573, 1627, 1718
NlaIV	GGNNCC	4 cut(s)	759, 942, 1189, 1236
NmuCI	GTSAC	2 cut(s)	612, 1408
NsiI	ATGCAT	1 cut(s)	306
NspI	RCATGY	2 cut(s)	620, 1718
NspV	TTCGAA	1 cut(s)	346
PciI	ACATGT	1 cut(s)	616
PcsI	WCGNNNNNNNCGW	2 cut(s)	86, 98
PfeI	GAWTC	9 cut(s)	98, 155, 161, 187, 841, 1152, 1363, 1652, 1688
PflMI	CCANNNNNTGG	1 cut(s)	1070
PkrI	GCNGC	5 cut(s)	22, 663, 735, 1045, 1575
PleI	GAGTC	3 cut(s)	178, 887, 1697
PpsI	GAGTC	3 cut(s)	178, 887, 1697
PscI	ACATGT	1 cut(s)	616
Psp6I	CCWGG	1 cut(s)	1237
PspGI	CCWGG	1 cut(s)	1237
PspN4I	GGNNCC	4 cut(s)	759, 942, 1189, 1236
PspOMI	GGGCCC	1 cut(s)	1234
PspPI	GGNCC	3 cut(s)	1234, 1235, 1282
RsaI	GTAC	1 cut(s)	868
RsaNI	GTAC	1 cut(s)	867
RseI	CAYNNNNRTG	2 cut(s)	621, 1540
SaqAI	TTAA	2 cut(s)	768, 924
SatI	GCNGC	5 cut(s)	21, 662, 734, 1044, 1574
Sau3AI	GATC	8 cut(s)	128, 325, 336, 445, 490, 795, 1057, 1747
Sau96I	GGNCC	3 cut(s)	1234, 1235, 1282
SchI	GAGTC	3 cut(s)	179, 887, 1697
ScrFI	CCNGG	1 cut(s)	1239
SduI	GDGCHC	4 cut(s)	1238, 1549, 1602, 1698
SfaNI	GCATC	4 cut(s)	291, 661, 1477, 1521
SfuI	TTCGAA	1 cut(s)	346
SinI	GGWCC	1 cut(s)	1282
SmiMI	CAYNNNNRTG	2 cut(s)	621, 1540
SmlI	CTYRAG	3 cut(s)	485, 1705, 1724
SmoI	CTYRAG	3 cut(s)	485, 1705, 1724
Sse9I	AATT	7 cut(s)	259, 352, 746, 782, 930, 1182, 1740
SsiI	CCGC	3 cut(s)	21, 734, 1301
SspMI	CTAG	4 cut(s)	227, 449, 573, 830
StyD4I	CCNGG	1 cut(s)	1237
StyI	CCWWGG	1 cut(s)	1519
TaaI	ACNGT	5 cut(s)	41, 68, 820, 1379, 1732
TaiI	ACGT	2 cut(s)	374, 1081
TaqI	TCGA	8 cut(s)	92, 101, 131, 164, 263, 346, 708, 1416
TasI	AATT	7 cut(s)	259, 352, 746, 782, 930, 1182, 1740
TauI	GCSGC	2 cut(s)	23, 736
TfiI	GAWTC	9 cut(s)	98, 155, 161, 187, 841, 1152, 1363, 1652, 1688
Tru1I	TTAA	2 cut(s)	768, 924
Tru9I	TTAA	2 cut(s)	768, 924
TscAI	CASTG	3 cut(s)	46, 61, 1488
TseFI	GTSAC	2 cut(s)	612, 1408
TseI	GCWGC	3 cut(s)	661, 1043, 1573
Tsp45I	GTSAC	2 cut(s)	612, 1408
TspDTI	ATGAA	4 cut(s)	828, 1117, 1133, 1192
TspGWI	ACGGA	1 cut(s)	1645
TspRI	CASTG	3 cut(s)	46, 61, 1488
Van91I	CCANNNNNTGG	1 cut(s)	1070
VpaK11BI	GGWCC	1 cut(s)	1282
XapI	RAATTY	1 cut(s)	746
XbaI	TCTAGA	1 cut(s)	448
XceI	RCATGY	2 cut(s)	620, 1718
XcmI	CCANNNNNNNNNTGG	1 cut(s)	383
XspI	CTAG	4 cut(s)	227, 449, 573, 830
Zsp2I	ATGCAT	1 cut(s)	306

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.