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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G25030 AT4G25030 |
| fragaria_vesca | FvH4_7g19880 FvH4_7g19880 |
| malus_domestica | MD01G1110900.v1.1 MD05G1255700.v1.1 MD07G1177000.v1.1 |
| prunus_persica | Prupe.2G215800_v2.0.a1 |
| pyrus_communis | pycom01g13820 pycom07g17110 |
| rosa_chinensis | RchiOBHm_Chr1g0363861 |
| rosa_laevigata | RLG00000027540 |
| rosa_multiflora | Rmu_co8207472.1_g000001 Rmu_sc0002483.1_g000002 Rmu_sc0041994.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00292910 |
| rosa_rugosa | Rorug01G0310000 Rorug01G0310100 Rorug01G0310200 Rorug01G0310300 |
| rosa_samantha | Rh1AG318400 Rh1BG281600 Rh1CG298000 Rh1DG312900 |
| rosa_wichuraiana | Rw1G028260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1798 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1159 |
| Acc36I | ACCTGC | 1 cut(s) | 1798 |
| AccB1I | GGYRCC | 1 cut(s) | 1902 |
| AccI | GTMKAC | 1 cut(s) | 199 |
| AciI | CCGC | 6 cut(s) | 211, 643, 1935, 2197, 2443, 3381 |
| AclWI | GGATC | 7 cut(s) | 664, 2110, 2195, 2208, 2766, 2774, 3264 |
| AcoI | YGGCCR | 3 cut(s) | 547, 1203, 3148 |
| AcuI | CTGAAG | 4 cut(s) | 447, 1881, 2244, 3500 |
| AcvI | CACGTG | 2 cut(s) | 1217, 3253 |
| AfaI | GTAC | 4 cut(s) | 530, 1453, 2083, 2984 |
| AfeI | AGCGCT | 1 cut(s) | 3335 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1009, 1676, 1729, 3456 |
| AflII | CTTAAG | 1 cut(s) | 2858 |
| AjnI | CCWGG | 5 cut(s) | 68, 1002, 1205, 1722, 2679 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1508, 1540 |
| AleI | CACNNNNGTG | 1 cut(s) | 1094 |
| Alw21I | GWGCWC | 1 cut(s) | 104 |
| Alw26I | GTCTC | 3 cut(s) | 47, 1872, 2702 |
| AlwI | GGATC | 7 cut(s) | 664, 2110, 2195, 2208, 2766, 2774, 3264 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3478 |
| Aor51HI | AGCGCT | 1 cut(s) | 3335 |
| AoxI | GGCC | 4 cut(s) | 547, 1203, 1560, 3148 |
| ApeKI | GCWGC | 3 cut(s) | 999, 2440, 2792 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2660, 2692 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1017, 1671 |
| AspLEI | GCGC | 2 cut(s) | 1103, 3336 |
| AspS9I | GGNCC | 3 cut(s) | 2393, 2676, 2882 |
| AsuHPI | GGTGA | 7 cut(s) | 265, 403, 413, 479, 679, 782, 1901 |
| AsuNHI | GCTAGC | 1 cut(s) | 2609 |
| AvaII | GGWCC | 3 cut(s) | 2393, 2676, 2882 |
| AxyI | CCTNAGG | 1 cut(s) | 3177 |
| BaeGI | GKGCMC | 1 cut(s) | 3168 |
| BalI | TGGCCA | 3 cut(s) | 549, 1205, 3150 |
| BamHI | GGATCC | 1 cut(s) | 2200 |
| BanI | GGYRCC | 1 cut(s) | 1902 |
| BanII | GRGCYC | 1 cut(s) | 2007 |
| BauI | CACGAG | 1 cut(s) | 205 |
| BbrPI | CACGTG | 2 cut(s) | 1217, 3253 |
| BbsI | GAAGAC | 2 cut(s) | 249, 797 |
| Bbv12I | GWGCWC | 1 cut(s) | 104 |
| BbvCI | CCTCAGC | 1 cut(s) | 224 |
| BbvI | GCAGC | 3 cut(s) | 1011, 2452, 2779 |
| BccI | CCATC | 9 cut(s) | 142, 572, 703, 850, 1763, 2209, 2336, 2863, 3025 |
| BceAI | ACGGC | 1 cut(s) | 3046 |
| BciT130I | CCWGG | 5 cut(s) | 70, 1004, 1207, 1724, 2681 |
| BciVI | GTATCC | 1 cut(s) | 2212 |
| BcoDI | GTCTC | 3 cut(s) | 47, 1872, 2702 |
| BfaI | CTAG | 8 cut(s) | 702, 840, 1449, 1520, 1617, 1676, 1766, 2610 |
| BfmI | CTRYAG | 3 cut(s) | 1398, 2400, 2892 |
| BfoI | RGCGCY | 1 cut(s) | 3337 |
| BfrI | CTTAAG | 1 cut(s) | 2858 |
| BfuAI | ACCTGC | 1 cut(s) | 1798 |
| BfuI | GTATCC | 1 cut(s) | 2212 |
| BglII | AGATCT | 3 cut(s) | 615, 2953, 3040 |
| BisI | GCNGC | 5 cut(s) | 211, 1000, 1936, 2441, 2793 |
| BlsI | GCNGC | 5 cut(s) | 212, 1001, 1937, 2442, 2794 |
| BmcAI | AGTACT | 2 cut(s) | 530, 1453 |
| Bme1390I | CCNGG | 5 cut(s) | 70, 1004, 1207, 1724, 2681 |
| Bme18I | GGWCC | 3 cut(s) | 2393, 2676, 2882 |
| BmgT120I | GGNCC | 3 cut(s) | 2393, 2676, 2882 |
| BmiI | GGNNCC | 6 cut(s) | 92, 1904, 2202, 2306, 2678, 3054 |
| BmrFI | CCNGG | 5 cut(s) | 70, 1004, 1207, 1724, 2681 |
| BmrI | ACTGGG | 2 cut(s) | 541, 2198 |
| BmsI | GCATC | 5 cut(s) | 1525, 1675, 2982, 3184, 3465 |
| BmtI | GCTAGC | 1 cut(s) | 2613 |
| BmuI | ACTGGG | 2 cut(s) | 541, 2198 |
| BpiI | GAAGAC | 2 cut(s) | 249, 797 |
| Bpu10I | CCTNAGC | 1 cut(s) | 224 |
| BpuEI | CTTGAG | 4 cut(s) | 640, 2273, 2528, 3021 |
| BsaAI | YACGTR | 3 cut(s) | 1217, 1755, 3253 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2757 |
| BsaJI | CCNNGG | 7 cut(s) | 734, 1242, 1589, 2567, 2679, 2680, 3198 |
| BsaWI | WCCGGW | 1 cut(s) | 817 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 26 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1009, 1676, 1729, 3456 |
| Bse1I | ACTGG | 7 cut(s) | 536, 1047, 1155, 2133, 2193, 2559, 3436 |
| Bse21I | CCTNAGG | 1 cut(s) | 3177 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2757 |
| BseBI | CCWGG | 5 cut(s) | 70, 1004, 1207, 1724, 2681 |
| BseDI | CCNNGG | 7 cut(s) | 734, 1242, 1589, 2567, 2679, 2680, 3198 |
| BseGI | GGATG | 8 cut(s) | 616, 1435, 2119, 2142, 3117, 3187, 3349, 3430 |
| BseJI | GATNNNNATC | 1 cut(s) | 2757 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1009, 1676, 1729, 3456 |
| BseMII | CTCAG | 6 cut(s) | 215, 315, 1283, 1973, 2787, 3282 |
| BseNI | ACTGG | 7 cut(s) | 536, 1047, 1155, 2133, 2193, 2559, 3436 |
| BseRI | GAGGAG | 3 cut(s) | 637, 788, 967 |
| BseSI | GKGCMC | 1 cut(s) | 3168 |
| BseXI | GCAGC | 3 cut(s) | 1011, 2452, 2779 |
| BseYI | CCCAGC | 3 cut(s) | 122, 2468, 3168 |
| BsgI | GTGCAG | 1 cut(s) | 1205 |
| BshFI | GGCC | 4 cut(s) | 549, 1205, 1562, 3150 |
| BshNI | GGYRCC | 1 cut(s) | 1902 |
| BsiHKAI | GWGCWC | 1 cut(s) | 104 |
| BsiSI | CCGG | 2 cut(s) | 662, 818 |
| BslFI | GGGAC | 1 cut(s) | 2662 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1009, 1676, 1729, 3456 |
| BsmAI | GTCTC | 3 cut(s) | 47, 1872, 2702 |
| BsmFI | GGGAC | 1 cut(s) | 2662 |
| BsmI | GAATGC | 1 cut(s) | 1748 |
| BsnI | GGCC | 4 cut(s) | 549, 1205, 1562, 3150 |
| Bsp1286I | GDGCHC | 3 cut(s) | 104, 2007, 3168 |
| Bsp1407I | TGTACA | 1 cut(s) | 2982 |
| BspACI | CCGC | 6 cut(s) | 211, 643, 1935, 2197, 2443, 3381 |
| BspANI | GGCC | 4 cut(s) | 549, 1205, 1562, 3150 |
| BspCNI | CTCAG | 6 cut(s) | 216, 316, 1282, 1972, 2788, 3283 |
| BspHI | TCATGA | 1 cut(s) | 1921 |
| BspLI | GGNNCC | 6 cut(s) | 92, 1904, 2202, 2306, 2678, 3054 |
| BspMAI | CTGCAG | 1 cut(s) | 1402 |
| BspMI | ACCTGC | 1 cut(s) | 1798 |
| BspOI | GCTAGC | 1 cut(s) | 2613 |
| BspPI | GGATC | 7 cut(s) | 664, 2110, 2195, 2208, 2766, 2774, 3264 |
| BspQI | GCTCTTC | 1 cut(s) | 92 |
| BspT107I | GGYRCC | 1 cut(s) | 1902 |
| BspTI | CTTAAG | 1 cut(s) | 2858 |
| BsrGI | TGTACA | 1 cut(s) | 2982 |
| BsrI | ACTGG | 7 cut(s) | 536, 1047, 1155, 2133, 2193, 2559, 3436 |
| BssECI | CCNNGG | 7 cut(s) | 734, 1242, 1589, 2567, 2679, 2680, 3198 |
| BssSI | CACGAG | 1 cut(s) | 205 |
| BssT1I | CCWWGG | 4 cut(s) | 1242, 1589, 2567, 3198 |
| Bst2BI | CACGAG | 1 cut(s) | 205 |
| Bst2UI | CCWGG | 5 cut(s) | 70, 1004, 1207, 1724, 2681 |
| Bst4CI | ACNGT | 7 cut(s) | 41, 510, 2123, 2599, 2618, 2909, 3223 |
| Bst6I | CTCTTC | 4 cut(s) | 92, 912, 1506, 2402 |
| BstAFI | CTTAAG | 1 cut(s) | 2858 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1535 |
| BstAUI | TGTACA | 1 cut(s) | 2982 |
| BstBAI | YACGTR | 3 cut(s) | 1217, 1755, 3253 |
| BstC8I | GCNNGC | 6 cut(s) | 687, 1125, 2611, 2632, 2855, 3446 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1674 |
| BstF5I | GGATG | 8 cut(s) | 616, 1435, 2119, 2142, 3117, 3187, 3349, 3430 |
| BstH2I | RGCGCY | 1 cut(s) | 3337 |
| BstHHI | GCGC | 2 cut(s) | 1103, 3336 |
| BstMAI | GTCTC | 3 cut(s) | 47, 1872, 2702 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 881, 1211, 1535, 1745, 1799, 2302, 3484 |
| BstNI | CCWGG | 5 cut(s) | 70, 1004, 1207, 1724, 2681 |
| BstNSI | RCATGY | 1 cut(s) | 2815 |
| BstSCI | CCNGG | 5 cut(s) | 68, 1002, 1205, 1722, 2679 |
| BstSFI | CTRYAG | 3 cut(s) | 1398, 2400, 2892 |
| BstSLI | GKGCMC | 1 cut(s) | 3168 |
| BstV1I | GCAGC | 3 cut(s) | 1011, 2452, 2779 |
| BstV2I | GAAGAC | 2 cut(s) | 249, 797 |
| BstX2I | RGATCY | 5 cut(s) | 615, 2102, 2200, 2953, 3040 |
| BstYI | RGATCY | 5 cut(s) | 615, 2102, 2200, 2953, 3040 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3177 |
| BsuI | GTATCC | 1 cut(s) | 2212 |
| BsuRI | GGCC | 4 cut(s) | 549, 1205, 1562, 3150 |
| BtsCI | GGATG | 8 cut(s) | 616, 1435, 2119, 2142, 3117, 3187, 3349, 3430 |
| BtsI | GCAGTG | 1 cut(s) | 1395 |
| BtsIMutI | CAGTG | 8 cut(s) | 1040, 1395, 1611, 2128, 2566, 2769, 3288, 3445 |
| BveI | ACCTGC | 1 cut(s) | 1798 |
| Cac8I | GCNNGC | 6 cut(s) | 687, 1125, 2611, 2632, 2855, 3446 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3478 |
| CciI | TCATGA | 1 cut(s) | 1921 |
| CfoI | GCGC | 2 cut(s) | 1103, 3336 |
| Cfr13I | GGNCC | 3 cut(s) | 2393, 2676, 2882 |
| CseI | GACGC | 1 cut(s) | 1791 |
| CsiI | ACCWGGT | 2 cut(s) | 68, 1722 |
| Csp6I | GTAC | 4 cut(s) | 529, 1452, 2082, 2983 |
| CviQI | GTAC | 4 cut(s) | 529, 1452, 2082, 2983 |
| DraI | TTTAAA | 1 cut(s) | 276 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1159 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1159 |
| EaeI | YGGCCR | 3 cut(s) | 547, 1203, 3148 |
| Eam1104I | CTCTTC | 4 cut(s) | 92, 912, 1506, 2402 |
| EarI | CTCTTC | 4 cut(s) | 92, 912, 1506, 2402 |
| Eco130I | CCWWGG | 4 cut(s) | 1242, 1589, 2567, 3198 |
| Eco24I | GRGCYC | 1 cut(s) | 2007 |
| Eco47I | GGWCC | 3 cut(s) | 2393, 2676, 2882 |
| Eco47III | AGCGCT | 1 cut(s) | 3335 |
| Eco57I | CTGAAG | 4 cut(s) | 447, 1881, 2244, 3500 |
| Eco72I | CACGTG | 2 cut(s) | 1217, 3253 |
| Eco81I | CCTNAGG | 1 cut(s) | 3177 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1674 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2393 |
| EcoRI | GAATTC | 3 cut(s) | 262, 437, 2417 |
| EcoRII | CCWGG | 5 cut(s) | 68, 1002, 1205, 1722, 2679 |
| EcoT14I | CCWWGG | 4 cut(s) | 1242, 1589, 2567, 3198 |
| EcoT22I | ATGCAT | 2 cut(s) | 1750, 3157 |
| EcoT38I | GRGCYC | 1 cut(s) | 2007 |
| ErhI | CCWWGG | 4 cut(s) | 1242, 1589, 2567, 3198 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3225, 3257 |
| FaqI | GGGAC | 1 cut(s) | 2662 |
| FauI | CCCGC | 2 cut(s) | 636, 2190 |
| FblI | GTMKAC | 1 cut(s) | 199 |
| Fnu4HI | GCNGC | 5 cut(s) | 211, 1000, 1936, 2441, 2793 |
| FokI | GGATG | 8 cut(s) | 623, 1442, 2126, 2149, 3104, 3194, 3356, 3437 |
| FriOI | GRGCYC | 1 cut(s) | 2007 |
| Fsp4HI | GCNGC | 5 cut(s) | 211, 1000, 1936, 2441, 2793 |
| FspBI | CTAG | 8 cut(s) | 702, 840, 1449, 1520, 1617, 1676, 1766, 2610 |
| GlaI | GCGC | 2 cut(s) | 1102, 3335 |
| GluI | GCNGC | 5 cut(s) | 211, 1000, 1936, 2441, 2793 |
| GsaI | CCCAGC | 3 cut(s) | 126, 2472, 3172 |
| HaeII | RGCGCY | 1 cut(s) | 3337 |
| HaeIII | GGCC | 4 cut(s) | 549, 1205, 1562, 3150 |
| HapII | CCGG | 2 cut(s) | 662, 818 |
| HgaI | GACGC | 1 cut(s) | 1791 |
| HhaI | GCGC | 2 cut(s) | 1103, 3336 |
| Hin6I | GCGC | 2 cut(s) | 1101, 3334 |
| HinP1I | GCGC | 2 cut(s) | 1101, 3334 |
| HincII | GTYRAC | 1 cut(s) | 200 |
| HindII | GTYRAC | 1 cut(s) | 200 |
| HindIII | AAGCTT | 2 cut(s) | 180, 2855 |
| HpaII | CCGG | 2 cut(s) | 662, 818 |
| HphI | GGTGA | 7 cut(s) | 265, 403, 413, 479, 679, 782, 1901 |
| Hpy166II | GTNNAC | 6 cut(s) | 200, 256, 670, 2126, 2985, 3386 |
| Hpy8I | GTNNAC | 6 cut(s) | 200, 256, 670, 2126, 2985, 3386 |
| Hpy99I | CGWCG | 1 cut(s) | 2618 |
| HpyCH4III | ACNGT | 7 cut(s) | 41, 510, 2123, 2599, 2618, 2909, 3223 |
| HpyCH4IV | ACGT | 4 cut(s) | 1216, 1639, 1754, 3252 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 881, 1211, 1535, 1745, 1799, 2302, 3484 |
| HpySE526I | ACGT | 4 cut(s) | 1216, 1639, 1754, 3252 |
| HspAI | GCGC | 2 cut(s) | 1101, 3334 |
| LguI | GCTCTTC | 1 cut(s) | 92 |
| LmnI | GCTCC | 5 cut(s) | 4, 2310, 3238, 3300, 3331 |
| Lsp1109I | GCAGC | 3 cut(s) | 1011, 2452, 2779 |
| LweI | GCATC | 5 cut(s) | 1525, 1675, 2982, 3184, 3465 |
| MabI | ACCWGGT | 2 cut(s) | 68, 1722 |
| MaeI | CTAG | 8 cut(s) | 702, 840, 1449, 1520, 1617, 1676, 1766, 2610 |
| MaeII | ACGT | 4 cut(s) | 1216, 1639, 1754, 3252 |
| MaeIII | GTNAC | 5 cut(s) | 1640, 2233, 2561, 3217, 3427 |
| MfeI | CAATTG | 1 cut(s) | 1848 |
| MflI | RGATCY | 5 cut(s) | 615, 2102, 2200, 2953, 3040 |
| MhlI | GDGCHC | 3 cut(s) | 104, 2007, 3168 |
| MlsI | TGGCCA | 3 cut(s) | 549, 1205, 3150 |
| MluNI | TGGCCA | 3 cut(s) | 549, 1205, 3150 |
| MlyI | GAGTC | 7 cut(s) | 455, 460, 785, 1412, 2158, 2419, 2702 |
| MmeI | TCCRAC | 3 cut(s) | 479, 838, 1395 |
| Mox20I | TGGCCA | 3 cut(s) | 549, 1205, 3150 |
| Mph1103I | ATGCAT | 2 cut(s) | 1750, 3157 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1017, 1671 |
| MscI | TGGCCA | 3 cut(s) | 549, 1205, 3150 |
| MseI | TTAA | 8 cut(s) | 275, 603, 1112, 1179, 2423, 2552, 2724, 2859 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1094 |
| Msp20I | TGGCCA | 3 cut(s) | 549, 1205, 3150 |
| MspA1I | CMGCKG | 2 cut(s) | 2443, 3381 |
| MspCI | CTTAAG | 1 cut(s) | 2858 |
| MspI | CCGG | 2 cut(s) | 662, 818 |
| MspR9I | CCNGG | 5 cut(s) | 70, 1004, 1207, 1724, 2681 |
| MunI | CAATTG | 1 cut(s) | 1848 |
| Mva1269I | GAATGC | 1 cut(s) | 1748 |
| MvaI | CCWGG | 5 cut(s) | 70, 1004, 1207, 1724, 2681 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 881, 1211, 1535, 1745, 1799, 2302, 3484 |
| NheI | GCTAGC | 1 cut(s) | 2609 |
| NlaIV | GGNNCC | 6 cut(s) | 92, 1904, 2202, 2306, 2678, 3054 |
| NmuCI | GTSAC | 3 cut(s) | 1640, 2233, 2561 |
| NsiI | ATGCAT | 2 cut(s) | 1750, 3157 |
| NspI | RCATGY | 1 cut(s) | 2815 |
| OliI | CACNNNNGTG | 1 cut(s) | 1094 |
| PagI | TCATGA | 1 cut(s) | 1921 |
| PaqCI | CACCTGC | 1 cut(s) | 1798 |
| PasI | CCCWGGG | 1 cut(s) | 2680 |
| PciSI | GCTCTTC | 1 cut(s) | 92 |
| PctI | GAATGC | 1 cut(s) | 1748 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1017, 1671 |
| PkrI | GCNGC | 5 cut(s) | 212, 1001, 1937, 2442, 2794 |
| PleI | GAGTC | 7 cut(s) | 454, 459, 784, 1412, 2157, 2418, 2701 |
| PmaCI | CACGTG | 2 cut(s) | 1217, 3253 |
| PmlI | CACGTG | 2 cut(s) | 1217, 3253 |
| PpsI | GAGTC | 7 cut(s) | 454, 459, 784, 1412, 2157, 2418, 2701 |
| Ppu21I | YACGTR | 3 cut(s) | 1217, 1755, 3253 |
| PpuMI | RGGWCCY | 1 cut(s) | 2393 |
| Psp5II | RGGWCCY | 1 cut(s) | 2393 |
| Psp6I | CCWGG | 5 cut(s) | 68, 1002, 1205, 1722, 2679 |
| PspCI | CACGTG | 2 cut(s) | 1217, 3253 |
| PspFI | CCCAGC | 3 cut(s) | 122, 2468, 3168 |
| PspGI | CCWGG | 5 cut(s) | 68, 1002, 1205, 1722, 2679 |
| PspN4I | GGNNCC | 6 cut(s) | 92, 1904, 2202, 2306, 2678, 3054 |
| PspPI | GGNCC | 3 cut(s) | 2393, 2676, 2882 |
| PspPPI | RGGWCCY | 1 cut(s) | 2393 |
| PstI | CTGCAG | 1 cut(s) | 1402 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3478 |
| PsuI | RGATCY | 5 cut(s) | 615, 2102, 2200, 2953, 3040 |
| RsaI | GTAC | 4 cut(s) | 530, 1453, 2083, 2984 |
| RsaNI | GTAC | 4 cut(s) | 529, 1452, 2082, 2983 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1094 |
| SalI | GTCGAC | 1 cut(s) | 198 |
| SapI | GCTCTTC | 1 cut(s) | 92 |
| SaqAI | TTAA | 8 cut(s) | 275, 603, 1112, 1179, 2423, 2552, 2724, 2859 |
| SatI | GCNGC | 5 cut(s) | 211, 1000, 1936, 2441, 2793 |
| Sau96I | GGNCC | 3 cut(s) | 2393, 2676, 2882 |
| ScaI | AGTACT | 2 cut(s) | 530, 1453 |
| SchI | GAGTC | 7 cut(s) | 455, 460, 785, 1412, 2158, 2419, 2702 |
| ScrFI | CCNGG | 5 cut(s) | 70, 1004, 1207, 1724, 2681 |
| SduI | GDGCHC | 3 cut(s) | 104, 2007, 3168 |
| SexAI | ACCWGGT | 2 cut(s) | 68, 1722 |
| SfaNI | GCATC | 5 cut(s) | 1525, 1675, 2982, 3184, 3465 |
| SfcI | CTRYAG | 3 cut(s) | 1398, 2400, 2892 |
| SinI | GGWCC | 3 cut(s) | 2393, 2676, 2882 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1094 |
| SmlI | CTYRAG | 5 cut(s) | 619, 2252, 2507, 2858, 3036 |
| SmoI | CTYRAG | 5 cut(s) | 619, 2252, 2507, 2858, 3036 |
| SsiI | CCGC | 6 cut(s) | 211, 643, 1935, 2197, 2443, 3381 |
| SspI | AATATT | 1 cut(s) | 2539 |
| SspMI | CTAG | 8 cut(s) | 702, 840, 1449, 1520, 1617, 1676, 1766, 2610 |
| StyD4I | CCNGG | 5 cut(s) | 68, 1002, 1205, 1722, 2679 |
| StyI | CCWWGG | 4 cut(s) | 1242, 1589, 2567, 3198 |
| TaaI | ACNGT | 7 cut(s) | 41, 510, 2123, 2599, 2618, 2909, 3223 |
| TaiI | ACGT | 4 cut(s) | 1219, 1642, 1757, 3255 |
| TaqI | TCGA | 7 cut(s) | 199, 449, 454, 2288, 2328, 2976, 3190 |
| TaqII | GACCGA | 1 cut(s) | 261 |
| TatI | WGTACW | 3 cut(s) | 528, 1451, 2982 |
| TauI | GCSGC | 2 cut(s) | 213, 1938 |
| Tru1I | TTAA | 8 cut(s) | 275, 603, 1112, 1179, 2423, 2552, 2724, 2859 |
| Tru9I | TTAA | 8 cut(s) | 275, 603, 1112, 1179, 2423, 2552, 2724, 2859 |
| TscAI | CASTG | 8 cut(s) | 1047, 1402, 1611, 2128, 2566, 2776, 3295, 3445 |
| TseFI | GTSAC | 3 cut(s) | 1640, 2233, 2561 |
| TseI | GCWGC | 3 cut(s) | 999, 2440, 2792 |
| Tsp45I | GTSAC | 3 cut(s) | 1640, 2233, 2561 |
| TspGWI | ACGGA | 3 cut(s) | 944, 1374, 2193 |
| TspRI | CASTG | 8 cut(s) | 1047, 1402, 1611, 2128, 2566, 2776, 3295, 3445 |
| Vha464I | CTTAAG | 1 cut(s) | 2858 |
| VpaK11BI | GGWCC | 3 cut(s) | 2393, 2676, 2882 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1674 |
| XbaI | TCTAGA | 3 cut(s) | 839, 1519, 1765 |
| XceI | RCATGY | 1 cut(s) | 2815 |
| XmiI | GTMKAC | 1 cut(s) | 199 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1017, 1671 |
| XspI | CTAG | 8 cut(s) | 702, 840, 1449, 1520, 1617, 1676, 1766, 2610 |
| ZrmI | AGTACT | 2 cut(s) | 530, 1453 |
| Zsp2I | ATGCAT | 2 cut(s) | 1750, 3157 |