Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0005995

Physical Location & Seq

Genomic Coordinates Reverse (-)

52135431 .. 52140144

Gene Structure 4714 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0419400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2598 bp

ATGTTTTACTCTATTGAAGATATTCCACTTGTTTCTGTTGAAGAAAAATGTATATACGTTTTAAATGCTAATTTATTTTCTTTGATCTGGTTCATTGCGATAACTAATGGTGCTCTTGTGTGCTTCCTTGGAGTTCATTTTAACAGATATATACGTGGCAGAGAAATGGATCGAAGTGAAATTCTTGAAGCAGAGGACAATCTCACATTGCAGATACCTTCCCCTCTGTCGATTGTTGCCATTGCTATCAATGGCAACAGAAAAAGCAAATACATTGTGAAGTGGGCGCTGGAGAAGTTCATTCCTGAAGGAAACCTCTTTTTCAAGTTGATACATGTCCGAGCAAGAATAACTGGAATTCCAACACCAATGGGGAATCTGATTCCTATTTCAGAAGTACGAGAAGATGTAGTAGCTGCATATAGAAAGGACATGGAGTGGCAGACAAGTGAGCTGCTTCTTCCATACAAGAAAATGTGTACTCTTAAGAAGGTGCAAGTTGATGTTGTAGTCATTGAGTCAGATAATGTGGCAAATGCAATAGCAGAGGAGGTTTCTGAGTCTGCTATAAGCAATCTTGTCATAGGTGCCCCATCTCGTGGCTTGTTTACAAGGAAACAAAAGGGACTGTCCCCAAAAATCTCAGCTTGCACACCAGGATTTTGTACAGTCTATGCTGTTTCAAAAGGAAAATTGTCATCACTACGCCCATCTGATTCCCAGTCTGTTGGAAGCATCAGAGATGATAACAGTGACACTTCTTCTATCAGCAGTTCTTCGAGTAATGCGTCCAGCTCACAAACAGGCACAGATCGTGGATCTGTTGGTTCATACTCTCATTTTCGTTCTCCTTCCCTACCGATGCAGCGATTTCAAGCTCTTTCAAGTATGAACCAAAATCTTCTGAATACAAAAGCAAAGTCAAATGAAATCATTCATTCTAAACACCAGTCTCTGGATCTTGGGGAGGAGAAGGATGCTATGACTATGAACTCTTATCCTAGTAACTCAGATGTTGGACGTGCATTGAGTCACTCCTCTAGTACTCGAAGCTTTGTAACAGATAACCAGTCATGGACTTCTGACCAAGCATCCACCTCAGATGTAGTTAAAAATTATTCATCTGAGAGCCAGGTAAATATCAACCTGGAGCTAGAAAAACTGAGAATTGAACTCAGACATGTCAAAGGAATGTATGCAATGGCTCAAAGTGAGACTATTGATGCTTCTCGGAAGATAAGCAATTTAAGTAATCGGCGGTTGGAGGAAGCAGTAAGGCTCAAGGAGATAAGTGCTATGGAGGAGAAAGCCAAAATGCTGGCAGAACAAGAGAAGGAGAAGTATGAAGCTGCTAAGATAGAAGCTGACTACATGAGACAGTGTATTGAAAGTGAAGCTTCTCAAAGGAGAGAAGCAGAAATGAAAGCCTTTCATGATGCCAAGGAAAAAGAAAAGCTTGAAAATGTACTAGTTGGTCCTGTGCAGCAATACCAGAAGTTCAGGTGGGAAGATATTGTTTCTGCAACTTCATCTTTCTCTGAGGATCTTAGGATTGGTATGGGTGCATATGGAACTGTTTATAAGAGCAACTTCCATCATACAACTGCAGCAGTAAAAGTCCTTCACTCTAAAGAGAATCACCAAACTAAGCAATTCTTGCAGGAGCTTGAAATCTTGAGCAAAATCCGACATCCCCATTTGCTTCTCCTCCTTGGTGCATGCCCTGATCATAGTTGCCTAGTGTATGAATACATGGAAAATGGTAGCTTGGATGACAGGCTGAACCAGAAAAATAACACACCCCCCATTCCTTGGTTTGAGAGGTTTCGGATTGCTTGGGAAGTAGCCTCAGCTCTAGTCTTTCTTCACAGCTCAAAGCCTAAACCAATTATCCATCGTGATCTGAAACCAGCAAACATCTTGCTTGATCATAACCTTGTGAGCAAGATTGGTGATGTCGGCCTTTCTACAATGCTTAATTTAGACCCTTCTATGTCCAGTATATACAATGAGACAGGGCCTGTTGGGACAATGTGTTACATAGACCCCGAGTATCAACGGACTGGGGTAATCTCTCCAAAATCAGATGTTTATGCTTTGGGAATGGTGATTTTGCAGTTGCTGACTGCAAAACCTGCAATAGCTATAACTCATCTGGTGGAAACAGCTATTCATGATAAAAGTTTGAAGGATGTTTTAGATCCTAAAGCTGGGTCTTGGCCAGTGGAAGAGGCAAGGCAATTAGCTGAATTGGGATTGAGCTGTGCAGAGCTTCGACGTAGGGACAGACCTGACTTGAAAGAGCAAGTGGTTCCAGCACTGGAGAGATTGAAAGAGGTTGCTGATAAAGCAAGAGACTCAGCTTCCACAGTTCAGTGCCTACCTCCAAACCACTTCATCTGTCCAATTCTCAAGGATGTGATGAATGAGCCTTGTGTCGCCGCGGATGGTTACACTTATGATCGCAGGGCAATAGAGAAATGGCTTGAAGAGAGTGATAACTCTCCAATGACAAACTTGGCTATGCCAAACAAGCACCTGATACCAAACTATACTCTTCTTTCTGCAATTGTGGAGTGGAAGTCTAGAAAACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0008150 GO:0009846 GO:0009856 GO:0022414 GO:0032501 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0051704

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PP2C

Protein Analysis

865

Amino Acids

96.98

Weight (kDa)

6.46

Isoelectric Point (pI)

45.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	516 - 765	1.2e-37	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	517 - 768	1.1e-38	Protein tyrosine and serine/threonine kinase
U-box	PF04564	796 - 864	4.2e-17	U-box domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005995)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53140 AT5G53140
fragaria_vesca	FvH4_7g31190
malus_domestica	MD01G1216600.v1.1 MD07G1286600.v1.1
prunus_persica	Prupe.2G308600_v2.0.a1 Prupe.2G308600_v2.0.a1 Prupe.2G308600_v2.0.a1 Prupe.2G308600_v2.0.a1 Prupe.2G308600_v2.0.a1 Prupe.2G308600_v2.0.a1 Prupe.2G308600_v2.0.a1 Prupe.2G308600_v2.0.a1
pyrus_communis	pycom07g25970
rosa_chinensis	RchiOBHm_Chr1g0380251
rosa_laevigata	RLG00000026315
rosa_multiflora	Rmu_sc0001232.1_g000029
rosa_roxburghii	Rroxscaffold_4G00279540
rosa_rugosa	Rorug01G0419300 Rorug01G0419400 Rorug01G0419500
rosa_samantha	Rh1AG444100 Rh1BG399200 Rh1CG412600 Rh1DG429700
rosa_wichuraiana	Rw1G038570 Rw1G038640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1581
Acc36I	ACCTGC	1 cut(s)	2143
AccB1I	GGYRCC	1 cut(s)	587
AccB7I	CCANNNNNTGG	3 cut(s)	599, 955, 1812
AccII	CGCG	1 cut(s)	2444
AciI	CCGC	3 cut(s)	1258, 2442, 2444
AclWI	GGATC	5 cut(s)	177, 826, 966, 1551, 2195
AcoI	YGGCCR	1 cut(s)	2219
AcsI	RAATTY	2 cut(s)	180, 357
AcuI	CTGAAG	1 cut(s)	327
AfaI	GTAC	5 cut(s)	399, 481, 667, 1045, 1467
AfiI	CCNNNNNNNGG	4 cut(s)	599, 955, 1812, 2210
AflII	CTTAAG	1 cut(s)	485
AflIII	ACRYGT	2 cut(s)	334, 1180
AhlI	ACTAGT	1 cut(s)	1468
AjiI	CACGTC	1 cut(s)	1022
AjnI	CCWGG	3 cut(s)	655, 1131, 1146
Alw21I	GWGCWC	1 cut(s)	115
Alw26I	GTCTC	5 cut(s)	957, 1208, 1369, 2006, 2349
AlwI	GGATC	5 cut(s)	177, 826, 966, 1551, 2195
AlwNI	CAGNNNCTG	3 cut(s)	955, 2021, 2122
Ama87I	CYCGRG	1 cut(s)	2048
AoxI	GGCC	3 cut(s)	1960, 2018, 2219
ApeKI	GCWGC	6 cut(s)	416, 454, 865, 1349, 1483, 1607
ApoI	RAATTY	2 cut(s)	180, 357
ArsI	GACNNNNNNTTYG	2 cut(s)	905, 937
Asp700I	GAANNNNTTC	2 cut(s)	21, 933
AspLEI	GCGC	1 cut(s)	289
AspS9I	GGNCC	2 cut(s)	1475, 2018
AsuHPI	GGTGA	3 cut(s)	1631, 1964, 2119
AvaI	CYCGRG	1 cut(s)	2048
AvaII	GGWCC	1 cut(s)	1475
BaeGI	GKGCMC	1 cut(s)	592
BalI	TGGCCA	1 cut(s)	2221
BanI	GGYRCC	1 cut(s)	587
BarI	GAAGNNNNNNTAC	2 cut(s)	1605, 1637
BauI	CACGAG	1 cut(s)	597
Bbv12I	GWGCWC	1 cut(s)	115
BbvCI	CCTCAGC	1 cut(s)	1849
BbvI	GCAGC	6 cut(s)	403, 441, 877, 1336, 1495, 1619
BccI	CCATC	5 cut(s)	601, 718, 1602, 1902, 2441
BciT130I	CCWGG	3 cut(s)	657, 1133, 1148
BclI	TGATCA	2 cut(s)	1726, 1927
BcoDI	GTCTC	5 cut(s)	957, 1208, 1369, 2006, 2349
BcuI	ACTAGT	1 cut(s)	1468
BfaI	CTAG	7 cut(s)	1002, 1041, 1154, 1469, 1739, 1856, 2586
BfmI	CTRYAG	1 cut(s)	1605
BfoI	RGCGCY	1 cut(s)	290
BfrI	CTTAAG	1 cut(s)	485
BfuAI	ACCTGC	1 cut(s)	2143
BisI	GCNGC	7 cut(s)	417, 455, 866, 1350, 1484, 1608, 2442
BlsI	GCNGC	7 cut(s)	418, 456, 867, 1351, 1485, 1609, 2443
BmcAI	AGTACT	1 cut(s)	1045
Bme1390I	CCNGG	3 cut(s)	657, 1133, 1148
Bme18I	GGWCC	1 cut(s)	1475
BmeT110I	CYCGRG	1 cut(s)	2048
BmgBI	CACGTC	1 cut(s)	1022
BmgT120I	GGNCC	2 cut(s)	1475, 2018
BmiI	GGNNCC	2 cut(s)	589, 2313
BmrFI	CCNGG	3 cut(s)	657, 1133, 1148
BmrI	ACTGGG	2 cut(s)	715, 2073
BmsI	GCATC	6 cut(s)	744, 852, 967, 1100, 1213, 1426
BmuI	ACTGGG	2 cut(s)	715, 2073
BpmI	CTGGAG	3 cut(s)	311, 1169, 2342
Bpu10I	CCTNAGC	1 cut(s)	1849
BpuEI	CTTGAG	3 cut(s)	1265, 1696, 2396
BsaAI	YACGTR	1 cut(s)	155
BsaJI	CCNNGG	5 cut(s)	127, 1440, 1711, 1811, 2442
BsaXI	ACNNNNNCTCC	2 cut(s)	2567, 2597
Bsc4I	CCNNNNNNNGG	4 cut(s)	599, 955, 1812, 2210
Bse1I	ACTGG	8 cut(s)	358, 721, 949, 1069, 1998, 2068, 2222, 2325
Bse3DI	GCAATG	4 cut(s)	93, 206, 240, 1206
BseBI	CCWGG	3 cut(s)	657, 1133, 1148
BseDI	CCNNGG	5 cut(s)	127, 1440, 1711, 1811, 2442
BseGI	GGATG	7 cut(s)	982, 1091, 1690, 1777, 2197, 2422, 2452
BseLI	CCNNNNNNNGG	4 cut(s)	599, 955, 1812, 2210
BseMI	GCAATG	4 cut(s)	93, 206, 240, 1206
BseNI	ACTGG	8 cut(s)	358, 721, 949, 1069, 1998, 2068, 2222, 2325
BseRI	GAGGAG	5 cut(s)	563, 983, 1027, 1316, 1697
BseSI	GKGCMC	1 cut(s)	592
BseXI	GCAGC	6 cut(s)	403, 441, 877, 1336, 1495, 1619
BseYI	CCCAGC	1 cut(s)	2210
BsgI	GTGCAG	2 cut(s)	1502, 2286
Bsh1236I	CGCG	1 cut(s)	2444
BshFI	GGCC	3 cut(s)	1962, 2020, 2221
BshNI	GGYRCC	1 cut(s)	587
BsiHKAI	GWGCWC	1 cut(s)	115
BsiHKCI	CYCGRG	1 cut(s)	2048
BslFI	GGGAC	4 cut(s)	616, 639, 2041, 2297
BslI	CCNNNNNNNGG	4 cut(s)	599, 955, 1812, 2210
BsmAI	GTCTC	5 cut(s)	957, 1208, 1369, 2006, 2349
BsmFI	GGGAC	4 cut(s)	616, 639, 2041, 2297
BsnI	GGCC	3 cut(s)	1962, 2020, 2221
BsoBI	CYCGRG	1 cut(s)	2048
Bsp1286I	GDGCHC	2 cut(s)	115, 592
Bsp1407I	TGTACA	1 cut(s)	665
BspACI	CCGC	3 cut(s)	1258, 2442, 2444
BspANI	GGCC	3 cut(s)	1962, 2020, 2221
BspFNI	CGCG	1 cut(s)	2444
BspHI	TCATGA	2 cut(s)	1432, 2173
BspLI	GGNNCC	2 cut(s)	589, 2313
BspMAI	CTGCAG	1 cut(s)	1609
BspMI	ACCTGC	1 cut(s)	2143
BspPI	GGATC	5 cut(s)	177, 826, 966, 1551, 2195
BspT107I	GGYRCC	1 cut(s)	587
BspTI	CTTAAG	1 cut(s)	485
BsrDI	GCAATG	4 cut(s)	93, 206, 240, 1206
BsrGI	TGTACA	1 cut(s)	665
BsrI	ACTGG	8 cut(s)	358, 721, 949, 1069, 1998, 2068, 2222, 2325
BssECI	CCNNGG	5 cut(s)	127, 1440, 1711, 1811, 2442
BssSI	CACGAG	1 cut(s)	597
BssT1I	CCWWGG	4 cut(s)	127, 1440, 1711, 1811
Bst2BI	CACGAG	1 cut(s)	597
Bst2UI	CCWGG	3 cut(s)	657, 1133, 1148
Bst4CI	ACNGT	7 cut(s)	630, 670, 752, 1380, 1576, 2371, 2595
Bst6I	CTCTTC	3 cut(s)	2223, 2484, 2562
BstAFI	CTTAAG	1 cut(s)	485
BstAPI	GCANNNNNTGC	2 cut(s)	1657, 2135
BstAUI	TGTACA	1 cut(s)	665
BstBAI	YACGTR	1 cut(s)	155
BstC8I	GCNNGC	3 cut(s)	649, 1320, 1720
BstDSI	CCRYGG	1 cut(s)	2442
BstF5I	GGATG	7 cut(s)	982, 1091, 1690, 1777, 2197, 2422, 2452
BstFNI	CGCG	1 cut(s)	2444
BstH2I	RGCGCY	1 cut(s)	290
BstHHI	GCGC	1 cut(s)	289
BstMAI	GTCTC	5 cut(s)	957, 1208, 1369, 2006, 2349
BstMWI	GCNNNNNNNGC	4 cut(s)	1657, 2135, 2348, 2533
BstNI	CCWGG	3 cut(s)	657, 1133, 1148
BstNSI	RCATGY	3 cut(s)	338, 1184, 1722
BstSCI	CCNGG	3 cut(s)	655, 1131, 1146
BstSFI	CTRYAG	1 cut(s)	1605
BstSLI	GKGCMC	1 cut(s)	592
BstUI	CGCG	1 cut(s)	2444
BstV1I	GCAGC	6 cut(s)	403, 441, 877, 1336, 1495, 1619
BstX2I	RGATCY	4 cut(s)	818, 958, 1543, 2200
BstXI	CCANNNNNNTGG	2 cut(s)	728, 1318
BstYI	RGATCY	4 cut(s)	818, 958, 1543, 2200
BsuRI	GGCC	3 cut(s)	1962, 2020, 2221
BtgI	CCRYGG	1 cut(s)	2442
BtrI	CACGTC	1 cut(s)	1022
BtsCI	GGATG	7 cut(s)	982, 1091, 1690, 1777, 2197, 2422, 2452
BtsIMutI	CAGTG	5 cut(s)	757, 1385, 2229, 2318, 2381
BveI	ACCTGC	1 cut(s)	2143
Cac8I	GCNNGC	3 cut(s)	649, 1320, 1720
CaiI	CAGNNNCTG	3 cut(s)	955, 2021, 2122
CciI	TCATGA	2 cut(s)	1432, 2173
CfoI	GCGC	1 cut(s)	289
Cfr13I	GGNCC	2 cut(s)	1475, 2018
Cfr42I	CCGCGG	1 cut(s)	2445
CseI	GACGC	1 cut(s)	777
Csp6I	GTAC	5 cut(s)	398, 480, 666, 1044, 1466
CviAII	CATG	9 cut(s)	335, 433, 1074, 1181, 1372, 1433, 1719, 1753, 2174
CviQI	GTAC	5 cut(s)	398, 480, 666, 1044, 1466
DraI	TTTAAA	1 cut(s)	63
EaeI	YGGCCR	1 cut(s)	2219
Eam1104I	CTCTTC	3 cut(s)	2223, 2484, 2562
EarI	CTCTTC	3 cut(s)	2223, 2484, 2562
Eco130I	CCWWGG	4 cut(s)	127, 1440, 1711, 1811
Eco47I	GGWCC	1 cut(s)	1475
Eco57I	CTGAAG	1 cut(s)	327
Eco88I	CYCGRG	1 cut(s)	2048
EcoO109I	RGGNCCY	1 cut(s)	2018
EcoRI	GAATTC	1 cut(s)	357
EcoRII	CCWGG	3 cut(s)	655, 1131, 1146
EcoT14I	CCWWGG	4 cut(s)	127, 1440, 1711, 1811
ErhI	CCWWGG	4 cut(s)	127, 1440, 1711, 1811
FaeI	CATG	9 cut(s)	338, 436, 1077, 1184, 1375, 1436, 1722, 1756, 2177
FalI	AAGNNNNNCTT	8 cut(s)	1381, 1413, 1440, 1472, 1574, 1606, 1640, 1672
FaqI	GGGAC	4 cut(s)	616, 639, 2041, 2297
FatI	CATG	9 cut(s)	334, 432, 1073, 1180, 1371, 1432, 1718, 1752, 2173
FauNDI	CATATG	1 cut(s)	1567
FbaI	TGATCA	2 cut(s)	1726, 1927
Fnu4HI	GCNGC	7 cut(s)	417, 455, 866, 1350, 1484, 1608, 2442
FokI	GGATG	7 cut(s)	989, 1078, 1677, 1784, 2204, 2429, 2459
Fsp4HI	GCNGC	7 cut(s)	417, 455, 866, 1350, 1484, 1608, 2442
FspBI	CTAG	7 cut(s)	1002, 1041, 1154, 1469, 1739, 1856, 2586
GlaI	GCGC	1 cut(s)	288
GluI	GCNGC	7 cut(s)	417, 455, 866, 1350, 1484, 1608, 2442
GsaI	CCCAGC	1 cut(s)	2214
GsuI	CTGGAG	3 cut(s)	311, 1169, 2342
HaeII	RGCGCY	1 cut(s)	290
HaeIII	GGCC	3 cut(s)	1962, 2020, 2221
HgaI	GACGC	1 cut(s)	777
HhaI	GCGC	1 cut(s)	289
Hin1II	CATG	9 cut(s)	338, 436, 1077, 1184, 1375, 1436, 1722, 1756, 2177
Hin6I	GCGC	1 cut(s)	287
HinP1I	GCGC	1 cut(s)	287
HindIII	AAGCTT	3 cut(s)	1051, 1395, 1454
HinfI	GANTC	8 cut(s)	376, 382, 518, 560, 716, 1030, 1636, 2357
HphI	GGTGA	3 cut(s)	1631, 1964, 2119
Hpy166II	GTNNAC	2 cut(s)	480, 609
Hpy188III	TCNNGA	8 cut(s)	185, 305, 956, 1433, 1675, 1898, 2174, 2586
Hpy8I	GTNNAC	2 cut(s)	480, 609
Hpy99I	CGWCG	1 cut(s)	2280
HpyAV	CCTTC	9 cut(s)	228, 302, 484, 861, 967, 1327, 1631, 1998, 2182
HpyCH4III	ACNGT	7 cut(s)	630, 670, 752, 1380, 1576, 2371, 2595
HpyCH4IV	ACGT	4 cut(s)	57, 154, 1021, 2278
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1657, 2135, 2348, 2533
HpySE526I	ACGT	4 cut(s)	57, 154, 1021, 2278
Hsp92II	CATG	9 cut(s)	338, 436, 1077, 1184, 1375, 1436, 1722, 1756, 2177
HspAI	GCGC	1 cut(s)	287
Ksp22I	TGATCA	2 cut(s)	1726, 1927
KspI	CCGCGG	1 cut(s)	2445
LmnI	GCTCC	2 cut(s)	1150, 1663
Lsp1109I	GCAGC	6 cut(s)	403, 441, 877, 1336, 1495, 1619
LweI	GCATC	6 cut(s)	744, 852, 967, 1100, 1213, 1426
MaeI	CTAG	7 cut(s)	1002, 1041, 1154, 1469, 1739, 1856, 2586
MaeII	ACGT	4 cut(s)	57, 154, 1021, 2278
MaeIII	GTNAC	6 cut(s)	752, 1004, 1031, 1057, 2036, 2450
MfeI	CAATTG	1 cut(s)	2568
MflI	RGATCY	4 cut(s)	818, 958, 1543, 2200
MhlI	GDGCHC	2 cut(s)	115, 592
MlsI	TGGCCA	1 cut(s)	2221
MluNI	TGGCCA	1 cut(s)	2221
MlyI	GAGTC	4 cut(s)	527, 569, 1039, 2351
MmeI	TCCRAC	5 cut(s)	386, 709, 997, 1242, 1711
Mox20I	TGGCCA	1 cut(s)	2221
MroXI	GAANNNNTTC	2 cut(s)	21, 933
MscI	TGGCCA	1 cut(s)	2221
MseI	TTAA	6 cut(s)	62, 141, 486, 1110, 1247, 1977
Msp20I	TGGCCA	1 cut(s)	2221
MspA1I	CMGCKG	1 cut(s)	2444
MspCI	CTTAAG	1 cut(s)	485
MspR9I	CCNGG	3 cut(s)	657, 1133, 1148
MunI	CAATTG	1 cut(s)	2568
MvaI	CCWGG	3 cut(s)	657, 1133, 1148
MvnI	CGCG	1 cut(s)	2444
MwoI	GCNNNNNNNGC	4 cut(s)	1657, 2135, 2348, 2533
NdeI	CATATG	1 cut(s)	1567
NlaIII	CATG	9 cut(s)	338, 436, 1077, 1184, 1375, 1436, 1722, 1756, 2177
NlaIV	GGNNCC	2 cut(s)	589, 2313
NmuCI	GTSAC	2 cut(s)	752, 1031
NspI	RCATGY	3 cut(s)	338, 1184, 1722
PaeI	GCATGC	1 cut(s)	1722
PagI	TCATGA	2 cut(s)	1432, 2173
PciI	ACATGT	2 cut(s)	334, 1180
PcsI	WCGNNNNNNNCGW	1 cut(s)	785
PdmI	GAANNNNTTC	2 cut(s)	21, 933
PfeI	GAWTC	4 cut(s)	376, 382, 716, 1636
PflMI	CCANNNNNTGG	3 cut(s)	599, 955, 1812
PkrI	GCNGC	7 cut(s)	418, 456, 867, 1351, 1485, 1609, 2443
PleI	GAGTC	4 cut(s)	526, 568, 1038, 2351
PpsI	GAGTC	4 cut(s)	526, 568, 1038, 2351
Ppu21I	YACGTR	1 cut(s)	155
PscI	ACATGT	2 cut(s)	334, 1180
PsiI	TTATAA	1 cut(s)	1581
Psp6I	CCWGG	3 cut(s)	655, 1131, 1146
PspFI	CCCAGC	1 cut(s)	2210
PspGI	CCWGG	3 cut(s)	655, 1131, 1146
PspN4I	GGNNCC	2 cut(s)	589, 2313
PspPI	GGNCC	2 cut(s)	1475, 2018
PstI	CTGCAG	1 cut(s)	1609
PstNI	CAGNNNCTG	3 cut(s)	955, 2021, 2122
PsuI	RGATCY	4 cut(s)	818, 958, 1543, 2200
RsaI	GTAC	5 cut(s)	399, 481, 667, 1045, 1467
RsaNI	GTAC	5 cut(s)	398, 480, 666, 1044, 1466
SacII	CCGCGG	1 cut(s)	2445
SaqAI	TTAA	6 cut(s)	62, 141, 486, 1110, 1247, 1977
SatI	GCNGC	7 cut(s)	417, 455, 866, 1350, 1484, 1608, 2442
Sau96I	GGNCC	2 cut(s)	1475, 2018
ScaI	AGTACT	1 cut(s)	1045
SchI	GAGTC	4 cut(s)	527, 569, 1039, 2351
ScrFI	CCNGG	3 cut(s)	657, 1133, 1148
SduI	GDGCHC	2 cut(s)	115, 592
SfaNI	GCATC	6 cut(s)	744, 852, 967, 1100, 1213, 1426
SfcI	CTRYAG	1 cut(s)	1605
Sfr303I	CCGCGG	1 cut(s)	2445
SgrBI	CCGCGG	1 cut(s)	2445
SinI	GGWCC	1 cut(s)	1475
SmlI	CTYRAG	4 cut(s)	485, 1280, 1675, 2411
SmoI	CTYRAG	4 cut(s)	485, 1280, 1675, 2411
SpeI	ACTAGT	1 cut(s)	1468
SphI	GCATGC	1 cut(s)	1722
SsiI	CCGC	3 cut(s)	1258, 2442, 2444
SspMI	CTAG	7 cut(s)	1002, 1041, 1154, 1469, 1739, 1856, 2586
StyD4I	CCNGG	3 cut(s)	655, 1131, 1146
StyI	CCWWGG	4 cut(s)	127, 1440, 1711, 1811
TaaI	ACNGT	7 cut(s)	630, 670, 752, 1380, 1576, 2371, 2595
TaiI	ACGT	4 cut(s)	60, 157, 1024, 2281
TaqI	TCGA	5 cut(s)	172, 230, 779, 1048, 2275
TatI	WGTACW	4 cut(s)	479, 665, 1043, 1465
TauI	GCSGC	1 cut(s)	2444
TfiI	GAWTC	4 cut(s)	376, 382, 716, 1636
Tru1I	TTAA	6 cut(s)	62, 141, 486, 1110, 1247, 1977
Tru9I	TTAA	6 cut(s)	62, 141, 486, 1110, 1247, 1977
TscAI	CASTG	5 cut(s)	757, 1385, 2229, 2325, 2381
TseFI	GTSAC	2 cut(s)	752, 1031
TseI	GCWGC	6 cut(s)	416, 454, 865, 1349, 1483, 1607
Tsp45I	GTSAC	2 cut(s)	752, 1031
TspGWI	ACGGA	1 cut(s)	2074
TspRI	CASTG	5 cut(s)	757, 1385, 2229, 2325, 2381
Van91I	CCANNNNNTGG	3 cut(s)	599, 955, 1812
Vha464I	CTTAAG	1 cut(s)	485
VpaK11BI	GGWCC	1 cut(s)	1475
XapI	RAATTY	2 cut(s)	180, 357
XbaI	TCTAGA	1 cut(s)	2585
XceI	RCATGY	3 cut(s)	338, 1184, 1722
XmnI	GAANNNNTTC	2 cut(s)	21, 933
XspI	CTAG	7 cut(s)	1002, 1041, 1154, 1469, 1739, 1856, 2586
ZrmI	AGTACT	1 cut(s)	1045

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.