Rorug01G0441700

Agenet domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0007598
Physical Location & Seq
Forward (+)
53913710 .. 53916681
2972 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0441700.1

Sequence Viewer

Length: 1272 bp
ATGCTAGGGTACGGGAGCCTTTGGTTGGTACAGAAACACCCCCAATGCCTCCAAAACTTAACATCTCCACCACCACCGCCCCTTAACCATGACTGGGCGATGAACCCACCTTTCCATTTCCCAGTCCCACAACCACTCCAAAACCCAGACCAACAACAACAACAAGTTCAAGATAACAAACCCACCGCCGATGATCATCATCTTCATAAGTCCAGGTTCGAATGGGACTTCACTCTCTCCACGGTCGTCTCCTCCCCCACCGCCACCGGCTCCGTCTCCAACACTCTCGGAGTAATCGAGTTCGACCCATCGGAAACTGTTCTAGCCACCGGAGGCATAGCCAGGAAGATTAGAATCTACAGCGTCAAGTCTCTCCTGCCGAGTCATGAACAGCCTAAGGACGACGTCGTTTCGCTAGACCACGCTGCTGCATGCGACTATTACATTTGCACCCCCGCCAAGCTCAGCAGCCTCCGCTGGCGGCCCGGGTCGAGCGGCCGGGTCCTCGGGTCTGGGGACTACGACGGCGTCGTCACGGAGTACGATCTCGAGTCCCACCTCCCCATCTTCGAGCGCGACGAGCACGGCGGGCGCCGGGTCTGGAGCCTCGACTACTCCGATTCGGATCCGGTTCTCGGGGCGTCCGGATCCGACGACGGGACCCTTCAAATGTGGGACCCGCGGTGCGAGGGCGGGGACTGTGTGGCTACAGTGGTTCCATCCGAATCGGGTAACCCGGTTTGTTGCGTGGAGTTCAATCCCTTCGGTGGACCGCTCCTGGCCGTCGGATGCGCTGACCGGAAAGCCTACGTCTATGATGTGAGGAGAATGGCGGGCCCGGTTTTGAGTTTTGACGGCCACGATAAGACCGTGACGTACGTCAGGTTCCTTAACGGCCGTTCGATGGTGTCAGCCGGAACAGACGGGTGTCTGAAGATGTGGAGCGTGGATGACGCGCGGGAAATTCGGACGTATTCGGGTCACACCAACAATCGGAGCTTTGTCGGGTTGTCGGTTTGGAGAAACGGTGGGCTTCTCGGGTGCGGGTCTGAAAATAATCAGGTGTTTGTGTATGATGTTAGGTGGGGTGAGCCTGTTTGGGTGCATGGGTTTGGACCAATGGGAAGCGAGGGTTGTGATGACCGTGGGTTTGTGAGCAGTGTGTGCTGGCGGCAGATGGGCGGTGAGGAACAGTGTACCCTCCTGGCGGGTGGATCCGATGGGGTTTTGCAGGTTTTTTTGGGTAGAAGAAAGTCATTAGCTTCGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Agenet

Protein Analysis

423

Amino Acids

46.3

Weight (kDa)

5.21

Isoelectric Point (pI)

50.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR5 PF25175 95 - 361 1.5e-22 WDR5 beta-propeller domain
WD40_CDC20-Fz PF24807 153 - 292 2.6e-10 CDC20/Fizzy WD40 domain
Beta-prop_THOC3 PF25174 154 - 361 5.6e-18 THOC3 beta-propeller domain
Beta-prop_TEP1_2nd PF25047 165 - 333 6.1e-13 TEP-1 second beta-propeller
Beta-prop_EML_2 PF23414 171 - 296 5.1e-08 Echinoderm microtubule-associated protein second beta-propeller
WD40_Gbeta PF25391 208 - 362 1.4e-06 G protein beta WD-40 repeat protein
Beta-prop_WDR3_1st PF25173 214 - 360 1.6e-15 WDR3 first beta-propeller domain
WD40_Prp19 PF24814 215 - 358 6.3e-13 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 245 - 334 1.7e-07 WDHD1 first WD40 domain
Beta-prop_DCAF4 PF23761 257 - 346 1.6e-06 DDB1- and CUL4-associated factor 4 beta-propeller domain
WD40_CDC20-Fz PF24807 286 - 412 2.7e-07 CDC20/Fizzy WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 530
AatII GACGTC 1 cut(s) 408
Acc36I ACCTGC 1 cut(s) 1222
AccB1I GGYRCC 1 cut(s) 591
AccBSI CCGCTC 2 cut(s) 495, 775
AccII CGCG 4 cut(s) 576, 682, 956, 958
AccIII TCCGGA 1 cut(s) 644
AclWI GGATC 6 cut(s) 620, 633, 642, 655, 1209, 1222
AcoI YGGCCR 4 cut(s) 496, 780, 856, 895
AcsI RAATTY 1 cut(s) 963
AcuI CTGAAG 1 cut(s) 953
AcyI GRCGYC 4 cut(s) 405, 528, 592, 641
AfaI GTAC 5 cut(s) 11, 30, 542, 878, 1198
AfiI CCNNNNNNNGG 8 cut(s) 25, 94, 635, 657, 767, 904, 993, 1207
AgsI TTSAA 3 cut(s) 170, 668, 757
AjnI CCWGG 4 cut(s) 212, 341, 777, 1203
AluBI AGCT 3 cut(s) 463, 999, 1262
AluI AGCT 3 cut(s) 463, 999, 1262
Alw21I GWGCWC 1 cut(s) 585
Alw26I GTCTC 3 cut(s) 253, 280, 375
AlwI GGATC 6 cut(s) 620, 633, 642, 655, 1209, 1222
Ama87I CYCGRG 5 cut(s) 485, 506, 548, 635, 1037
Aor13HI TCCGGA 1 cut(s) 644
AoxI GGCC 6 cut(s) 482, 496, 780, 835, 856, 895
ApaI GGGCCC 1 cut(s) 839
ApeKI GCWGC 3 cut(s) 425, 428, 468
ApoI RAATTY 1 cut(s) 963
ArsI GACNNNNNNTTYG 2 cut(s) 1133, 1165
Asp700I GAANNNNTTC 1 cut(s) 318
AspLEI GCGC 4 cut(s) 576, 594, 794, 958
AspS9I GGNCC 8 cut(s) 483, 502, 660, 676, 770, 835, 836, 1115
AsuC2I CCSGG 6 cut(s) 486, 487, 500, 596, 737, 839
AsuHPI GGTGA 2 cut(s) 1100, 1196
AsuII TTCGAA 1 cut(s) 219
AvaI CYCGRG 5 cut(s) 485, 506, 548, 635, 1037
AvaII GGWCC 5 cut(s) 502, 660, 676, 770, 1115
AxyI CCTNAGG 1 cut(s) 396
BaeGI GKGCMC 1 cut(s) 839
BamHI GGATCC 3 cut(s) 625, 647, 1214
BanI GGYRCC 1 cut(s) 591
BanII GRGCYC 1 cut(s) 839
Bbv12I GWGCWC 1 cut(s) 585
BbvI GCAGC 3 cut(s) 412, 415, 480
BccI CCATC 6 cut(s) 316, 572, 727, 898, 1171, 1214
BceAI ACGGC 6 cut(s) 541, 601, 767, 871, 882, 910
BciT130I CCWGG 4 cut(s) 214, 343, 779, 1205
BclI TGATCA 1 cut(s) 193
BcnI CCSGG 6 cut(s) 486, 487, 500, 596, 737, 839
BcoDI GTCTC 3 cut(s) 253, 280, 375
BfaI CTAG 3 cut(s) 5, 323, 416
BfmI CTRYAG 2 cut(s) 358, 708
BfoI RGCGCY 1 cut(s) 595
BfuAI ACCTGC 1 cut(s) 1222
BisI GCNGC 6 cut(s) 426, 429, 469, 482, 496, 1172
BlpI GCTNAGC 1 cut(s) 464
BlsI GCNGC 6 cut(s) 427, 430, 470, 483, 497, 1173
Bme18I GGWCC 5 cut(s) 502, 660, 676, 770, 1115
BmeT110I CYCGRG 5 cut(s) 485, 506, 548, 635, 1037
BmgT120I GGNCC 8 cut(s) 483, 502, 660, 676, 770, 835, 836, 1115
BmrI ACTGGG 2 cut(s) 103, 116
BmsI GCATC 1 cut(s) 779
BmuI ACTGGG 2 cut(s) 103, 116
BoxI GACNNNNGTC 2 cut(s) 878, 927
BpmI CTGGAG 1 cut(s) 622
Bpu1102I GCTNAGC 1 cut(s) 464
Bpu14I TTCGAA 1 cut(s) 219
BpuMI CCSGG 6 cut(s) 486, 487, 500, 596, 737, 839
BsaBI GATNNNNATC 4 cut(s) 195, 198, 353, 624
BsaHI GRCGYC 4 cut(s) 405, 528, 592, 641
BsaJI CCNNGG 5 cut(s) 240, 485, 505, 680, 1144
BsaWI WCCGGW 4 cut(s) 329, 628, 644, 798
BsaXI ACNNNNNCTCC 4 cut(s) 120, 150, 1012, 1042
Bsc4I CCNNNNNNNGG 8 cut(s) 25, 94, 635, 657, 767, 904, 993, 1207
Bse118I RCCGGY 1 cut(s) 266
Bse1I ACTGG 2 cut(s) 98, 122
Bse21I CCTNAGG 1 cut(s) 396
Bse8I GATNNNNATC 4 cut(s) 195, 198, 353, 624
BseAI TCCGGA 1 cut(s) 644
BseBI CCWGG 4 cut(s) 214, 343, 779, 1205
BseDI CCNNGG 5 cut(s) 240, 485, 505, 680, 1144
BseGI GGATG 3 cut(s) 719, 794, 955
BseJI GATNNNNATC 4 cut(s) 195, 198, 353, 624
BseLI CCNNNNNNNGG 8 cut(s) 25, 94, 635, 657, 767, 904, 993, 1207
BseMII CTCAG 1 cut(s) 478
BseNI ACTGG 2 cut(s) 98, 122
BseRI GAGGAG 2 cut(s) 241, 838
BseSI GKGCMC 1 cut(s) 839
BseX3I CGGCCG 2 cut(s) 496, 895
BseXI GCAGC 3 cut(s) 412, 415, 480
Bsh1236I CGCG 4 cut(s) 576, 682, 956, 958
Bsh1285I CGRYCG 3 cut(s) 246, 499, 898
BshFI GGCC 6 cut(s) 484, 498, 782, 837, 858, 897
BshNI GGYRCC 1 cut(s) 591
BsiEI CGRYCG 3 cut(s) 246, 499, 898
BsiHKAI GWGCWC 1 cut(s) 585
BsiHKCI CYCGRG 5 cut(s) 485, 506, 548, 635, 1037
BsiWI CGTACG 1 cut(s) 876
BslFI GGGAC 7 cut(s) 110, 239, 530, 538, 673, 689, 710
BslI CCNNNNNNNGG 8 cut(s) 25, 94, 635, 657, 767, 904, 993, 1207
BsmAI GTCTC 3 cut(s) 253, 280, 375
BsmBI CGTCTC 2 cut(s) 253, 280
BsmFI GGGAC 7 cut(s) 110, 239, 530, 538, 673, 689, 710
BsnI GGCC 6 cut(s) 484, 498, 782, 837, 858, 897
BsoBI CYCGRG 5 cut(s) 485, 506, 548, 635, 1037
Bsp119I TTCGAA 1 cut(s) 219
Bsp120I GGGCCC 1 cut(s) 835
Bsp1286I GDGCHC 2 cut(s) 585, 839
Bsp13I TCCGGA 1 cut(s) 644
Bsp143I GATC 5 cut(s) 193, 544, 625, 647, 1214
Bsp1720I GCTNAGC 1 cut(s) 464
BspANI GGCC 6 cut(s) 484, 498, 782, 837, 858, 897
BspCNI CTCAG 1 cut(s) 477
BspEI TCCGGA 1 cut(s) 644
BspFNI CGCG 4 cut(s) 576, 682, 956, 958
BspHI TCATGA 1 cut(s) 385
BspMI ACCTGC 1 cut(s) 1222
BspPI GGATC 6 cut(s) 620, 633, 642, 655, 1209, 1222
BspT104I TTCGAA 1 cut(s) 219
BspT107I GGYRCC 1 cut(s) 591
BsrBI CCGCTC 2 cut(s) 495, 775
BsrFI RCCGGY 1 cut(s) 266
BsrI ACTGG 2 cut(s) 98, 122
BssAI RCCGGY 1 cut(s) 266
BssECI CCNNGG 5 cut(s) 240, 485, 505, 680, 1144
BssMI GATC 5 cut(s) 193, 544, 625, 647, 1214
BssNI GRCGYC 4 cut(s) 405, 528, 592, 641
Bst2UI CCWGG 4 cut(s) 214, 343, 779, 1205
Bst4CI ACNGT 8 cut(s) 244, 319, 701, 712, 871, 1028, 1145, 1194
BstACI GRCGYC 4 cut(s) 405, 528, 592, 641
BstAPI GCANNNNNTGC 1 cut(s) 1164
BstBI TTCGAA 1 cut(s) 219
BstC8I GCNNGC 5 cut(s) 433, 479, 590, 835, 1169
BstDEI CTNAG 2 cut(s) 396, 464
BstDSI CCRYGG 3 cut(s) 240, 680, 1144
BstEII GGTNACC 1 cut(s) 731
BstF5I GGATG 3 cut(s) 719, 794, 955
BstFNI CGCG 4 cut(s) 576, 682, 956, 958
BstH2I RGCGCY 1 cut(s) 595
BstHHI GCGC 4 cut(s) 576, 594, 794, 958
BstKTI GATC 5 cut(s) 196, 547, 628, 650, 1217
BstMAI GTCTC 3 cut(s) 253, 280, 375
BstMBI GATC 5 cut(s) 193, 544, 625, 647, 1214
BstMCI CGRYCG 3 cut(s) 246, 499, 898
BstMWI GCNNNNNNNGC 4 cut(s) 474, 580, 589, 1164
BstNI CCWGG 4 cut(s) 214, 343, 779, 1205
BstNSI RCATGY 1 cut(s) 435
BstPAI GACNNNNGTC 2 cut(s) 878, 927
BstPI GGTNACC 1 cut(s) 731
BstSFI CTRYAG 2 cut(s) 358, 708
BstSLI GKGCMC 1 cut(s) 839
BstUI CGCG 4 cut(s) 576, 682, 956, 958
BstV1I GCAGC 3 cut(s) 412, 415, 480
BstX2I RGATCY 3 cut(s) 625, 647, 1214
BstYI RGATCY 3 cut(s) 625, 647, 1214
BstZI CGGCCG 2 cut(s) 496, 895
Bsu36I CCTNAGG 1 cut(s) 396
BsuRI GGCC 6 cut(s) 484, 498, 782, 837, 858, 897
BtgI CCRYGG 3 cut(s) 240, 680, 1144
BtgZI GCGATG 1 cut(s) 113
BtsCI GGATG 3 cut(s) 719, 794, 955
BtsI GCAGTG 1 cut(s) 1165
BtsIMutI CAGTG 3 cut(s) 717, 1165, 1199
BveI ACCTGC 1 cut(s) 1222
Cac8I GCNNGC 5 cut(s) 433, 479, 590, 835, 1169
CciI TCATGA 1 cut(s) 385
CfoI GCGC 4 cut(s) 576, 594, 794, 958
Cfr10I RCCGGY 1 cut(s) 266
Cfr13I GGNCC 8 cut(s) 483, 502, 660, 676, 770, 835, 836, 1115
Cfr42I CCGCGG 1 cut(s) 683
Cfr9I CCCGGG 1 cut(s) 485
CseI GACGC 4 cut(s) 352, 517, 630, 962
Csp6I GTAC 5 cut(s) 10, 29, 541, 877, 1197
CviAII CATG 4 cut(s) 89, 386, 432, 1106
CviQI GTAC 5 cut(s) 10, 29, 541, 877, 1197
DdeI CTNAG 2 cut(s) 396, 464
DinI GGCGCC 1 cut(s) 593
DpnI GATC 5 cut(s) 195, 546, 627, 649, 1216
DpnII GATC 5 cut(s) 193, 544, 625, 647, 1214
DrdI GACNNNNNNGTC 1 cut(s) 530
DseDI GACNNNNNNGTC 1 cut(s) 530
EaeI YGGCCR 4 cut(s) 496, 780, 856, 895
EagI CGGCCG 2 cut(s) 496, 895
EclXI CGGCCG 2 cut(s) 496, 895
Eco24I GRGCYC 1 cut(s) 839
Eco47I GGWCC 5 cut(s) 502, 660, 676, 770, 1115
Eco52I CGGCCG 2 cut(s) 496, 895
Eco57I CTGAAG 1 cut(s) 953
Eco81I CCTNAGG 1 cut(s) 396
Eco88I CYCGRG 5 cut(s) 485, 506, 548, 635, 1037
Eco91I GGTNACC 1 cut(s) 731
EcoO109I RGGNCCY 3 cut(s) 502, 660, 676
EcoO65I GGTNACC 1 cut(s) 731
EcoRII CCWGG 4 cut(s) 212, 341, 777, 1203
EcoT38I GRGCYC 1 cut(s) 839
EgeI GGCGCC 1 cut(s) 593
EheI GGCGCC 1 cut(s) 593
Esp3I CGTCTC 2 cut(s) 253, 280
FaeI CATG 4 cut(s) 92, 389, 435, 1109
FaiI YATR 8 cut(s) 90, 207, 338, 387, 433, 816, 1074, 1107
FaqI GGGAC 7 cut(s) 110, 239, 530, 538, 673, 689, 710
FatI CATG 4 cut(s) 88, 385, 431, 1105
FauI CCCGC 8 cut(s) 463, 581, 686, 687, 826, 951, 1037, 1201
FbaI TGATCA 1 cut(s) 193
Fnu4HI GCNGC 6 cut(s) 426, 429, 469, 482, 496, 1172
FokI GGATG 3 cut(s) 706, 801, 962
FriOI GRGCYC 1 cut(s) 839
Fsp4HI GCNGC 6 cut(s) 426, 429, 469, 482, 496, 1172
FspBI CTAG 3 cut(s) 5, 323, 416
GlaI GCGC 4 cut(s) 575, 593, 793, 957
GluI GCNGC 6 cut(s) 426, 429, 469, 482, 496, 1172
GsuI CTGGAG 1 cut(s) 622
HaeII RGCGCY 1 cut(s) 595
HaeIII GGCC 6 cut(s) 484, 498, 782, 837, 858, 897
HgaI GACGC 4 cut(s) 352, 517, 630, 962
HhaI GCGC 4 cut(s) 576, 594, 794, 958
Hin1I GRCGYC 4 cut(s) 405, 528, 592, 641
Hin1II CATG 4 cut(s) 92, 389, 435, 1109
Hin6I GCGC 4 cut(s) 574, 592, 792, 956
HinP1I GCGC 4 cut(s) 574, 592, 792, 956
HinfI GANTC 5 cut(s) 354, 382, 551, 620, 725
HphI GGTGA 2 cut(s) 1100, 1196
Hpy166II GTNNAC 2 cut(s) 770, 1197
Hpy188III TCNNGA 5 cut(s) 170, 386, 548, 601, 645
Hpy8I GTNNAC 2 cut(s) 770, 1197
Hpy99I CGWCG 8 cut(s) 407, 410, 527, 533, 581, 656, 659, 788
HpyAV CCTTC 2 cut(s) 674, 772
HpyCH4III ACNGT 8 cut(s) 244, 319, 701, 712, 871, 1028, 1145, 1194
HpyCH4IV ACGT 5 cut(s) 405, 810, 875, 879, 971
HpyCH4V TGCA 4 cut(s) 431, 450, 1105, 1231
HpyF10VI GCNNNNNNNGC 4 cut(s) 474, 580, 589, 1164
HpyF3I CTNAG 2 cut(s) 396, 464
HpySE526I ACGT 5 cut(s) 405, 810, 875, 879, 971
Hsp92I GRCGYC 4 cut(s) 405, 528, 592, 641
Hsp92II CATG 4 cut(s) 92, 389, 435, 1109
HspAI GCGC 4 cut(s) 574, 592, 792, 956
KasI GGCGCC 1 cut(s) 591
KflI GGGWCCC 2 cut(s) 660, 676
Kpn2I TCCGGA 1 cut(s) 644
Ksp22I TGATCA 1 cut(s) 193
KspI CCGCGG 1 cut(s) 683
Kzo9I GATC 5 cut(s) 193, 544, 625, 647, 1214
LmnI GCTCC 6 cut(s) 15, 275, 603, 780, 942, 996
Lsp1109I GCAGC 3 cut(s) 412, 415, 480
LweI GCATC 1 cut(s) 779
MaeI CTAG 3 cut(s) 5, 323, 416
MaeII ACGT 5 cut(s) 405, 810, 875, 879, 971
MaeIII GTNAC 4 cut(s) 532, 731, 871, 980
MalI GATC 5 cut(s) 195, 546, 627, 649, 1216
MbiI CCGCTC 2 cut(s) 495, 775
MboI GATC 5 cut(s) 193, 544, 625, 647, 1214
MboII GAAGA 5 cut(s) 194, 358, 559, 946, 1260
MflI RGATCY 3 cut(s) 625, 647, 1214
MhlI GDGCHC 2 cut(s) 585, 839
MluCI AATT 1 cut(s) 963
Mly113I GGCGCC 1 cut(s) 592
MlyI GAGTC 2 cut(s) 391, 560
MmeI TCCRAC 3 cut(s) 303, 675, 766
MroI TCCGGA 1 cut(s) 644
MroXI GAANNNNTTC 1 cut(s) 318
MseI TTAA 3 cut(s) 59, 84, 891
MspA1I CMGCKG 2 cut(s) 477, 682
MvaI CCWGG 4 cut(s) 214, 343, 779, 1205
MvnI CGCG 4 cut(s) 576, 682, 956, 958
MwoI GCNNNNNNNGC 4 cut(s) 474, 580, 589, 1164
NarI GGCGCC 1 cut(s) 592
NciI CCSGG 6 cut(s) 486, 487, 500, 596, 737, 839
NdeII GATC 5 cut(s) 193, 544, 625, 647, 1214
NlaIII CATG 4 cut(s) 92, 389, 435, 1109
NmeAIII GCCGAG 1 cut(s) 405
NmuCI GTSAC 3 cut(s) 532, 871, 980
NspI RCATGY 1 cut(s) 435
NspV TTCGAA 1 cut(s) 219
PaeI GCATGC 1 cut(s) 435
PaeR7I CTCGAG 1 cut(s) 548
PagI TCATGA 1 cut(s) 385
PcsI WCGNNNNNNNCGW 5 cut(s) 294, 528, 576, 615, 867
PdmI GAANNNNTTC 1 cut(s) 318
PfeI GAWTC 3 cut(s) 354, 620, 725
Pfl23II CGTACG 1 cut(s) 876
PflFI GACNNNGTC 2 cut(s) 404, 527
PkrI GCNGC 6 cut(s) 427, 430, 470, 483, 497, 1173
PleI GAGTC 2 cut(s) 390, 559
PluTI GGCGCC 1 cut(s) 595
PpsI GAGTC 2 cut(s) 390, 559
PpuMI RGGWCCY 3 cut(s) 502, 660, 676
PshAI GACNNNNGTC 2 cut(s) 878, 927
Psp5II RGGWCCY 3 cut(s) 502, 660, 676
Psp6I CCWGG 4 cut(s) 212, 341, 777, 1203
PspEI GGTNACC 1 cut(s) 731
PspGI CCWGG 4 cut(s) 212, 341, 777, 1203
PspLI CGTACG 1 cut(s) 876
PspOMI GGGCCC 1 cut(s) 835
PspPI GGNCC 8 cut(s) 483, 502, 660, 676, 770, 835, 836, 1115
PspPPI RGGWCCY 3 cut(s) 502, 660, 676
PsrI GAACNNNNNNTAC 2 cut(s) 869, 901
PsuI RGATCY 3 cut(s) 625, 647, 1214
PsyI GACNNNGTC 2 cut(s) 404, 527
RsaI GTAC 5 cut(s) 11, 30, 542, 878, 1198
RsaNI GTAC 5 cut(s) 10, 29, 541, 877, 1197
SacII CCGCGG 1 cut(s) 683
SaqAI TTAA 3 cut(s) 59, 84, 891
SatI GCNGC 6 cut(s) 426, 429, 469, 482, 496, 1172
Sau3AI GATC 5 cut(s) 193, 544, 625, 647, 1214
Sau96I GGNCC 8 cut(s) 483, 502, 660, 676, 770, 835, 836, 1115
SchI GAGTC 2 cut(s) 391, 560
SduI GDGCHC 2 cut(s) 585, 839
SfaNI GCATC 1 cut(s) 779
SfcI CTRYAG 2 cut(s) 358, 708
SfoI GGCGCC 1 cut(s) 593
Sfr274I CTCGAG 1 cut(s) 548
Sfr303I CCGCGG 1 cut(s) 683
SfuI TTCGAA 1 cut(s) 219
SgrBI CCGCGG 1 cut(s) 683
SinI GGWCC 5 cut(s) 502, 660, 676, 770, 1115
SlaI CTCGAG 1 cut(s) 548
SmaI CCCGGG 1 cut(s) 487
SmlI CTYRAG 1 cut(s) 548
SmoI CTYRAG 1 cut(s) 548
SphI GCATGC 1 cut(s) 435
Sse9I AATT 1 cut(s) 963
SspDI GGCGCC 1 cut(s) 591
SspMI CTAG 3 cut(s) 5, 323, 416
TaaI ACNGT 8 cut(s) 244, 319, 701, 712, 871, 1028, 1145, 1194
TaiI ACGT 5 cut(s) 408, 813, 878, 882, 974
TaqI TCGA 8 cut(s) 219, 297, 303, 491, 549, 570, 609, 902
TasI AATT 1 cut(s) 963
TauI GCSGC 3 cut(s) 484, 498, 1174
TfiI GAWTC 3 cut(s) 354, 620, 725
Tru1I TTAA 3 cut(s) 59, 84, 891
Tru9I TTAA 3 cut(s) 59, 84, 891
TscAI CASTG 3 cut(s) 717, 1165, 1199
TseFI GTSAC 3 cut(s) 532, 871, 980
TseI GCWGC 3 cut(s) 425, 428, 468
Tsp45I GTSAC 3 cut(s) 532, 871, 980
TspDTI ATGAA 3 cut(s) 116, 194, 402
TspGWI ACGGA 2 cut(s) 262, 551
TspMI CCCGGG 1 cut(s) 485
TspRI CASTG 3 cut(s) 717, 1165, 1199
Tth111I GACNNNGTC 2 cut(s) 404, 527
VpaK11BI GGWCC 5 cut(s) 502, 660, 676, 770, 1115
XapI RAATTY 1 cut(s) 963
XceI RCATGY 1 cut(s) 435
XhoI CTCGAG 1 cut(s) 548
XmaI CCCGGG 1 cut(s) 485
XmnI GAANNNNTTC 1 cut(s) 318
XspI CTAG 3 cut(s) 5, 323, 416
ZraI GACGTC 1 cut(s) 406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.