Rorug02G0044600

Growth-regulating factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0007690
Physical Location & Seq
Reverse (-)
3514318 .. 3528782
14465 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0044600.1

Sequence Viewer

Length: 7740 bp
ATGGACCAGCCTAACACCTCCACTTCTTCCCGTTCTGCCCCTGTCGAAGAGCCAGAGTACCTCGCGCGCTACTTAGTCGTCAAGCACTCGTGGCGCGGCCGCTACAAGCGGATTCTCTGCCTCTCGAGCGCCTCCATCGTCACCTTGGACCCGTCCACCCTCGCCGTCACGAACTCGTACGTCGTCGCGTCGGATTTCGACACCGCCGCGCCGATCATCGGCCGCGACGAGAGCTCCAGTGAGTTCAATTTGAGTGTTCGGACTGACGGCAGGGGGAAGTTCAAGTCGGTGAAGTTCTCGTCCAGGTATAGGGCGAGCATACTGACCGAGCTGCATAGGATTAGGGGCAACCGGCTGGGGGTAGTAGCGGAATTTCCAGTGCTTCATCTCCGGCGACGGACTGGCGAGTGGGTTCCTTTTAAACTAAAAGTTACTTATGTTGGGGTTGAACTTATTGATTTAAAATGCGGAGACCTCCGCTGGTGCTTGGATTTTAGAGATTTTCATTCCCCTGCCATTATTTCCCTTTTCGATGCTTATGGGAAGAAAGGCATTGAAGGAGGTTTTATTCTTTGTCCTTCATATGGAAGAAAATCGAAAGCTTTTCAAGCTGCTTCTGGAACAACAAATTCTGCTATCATTGCTAATTTGACTAAAACAGCAAAATCTATGGTCGGGGTGTCACTAAATGTGGAAACTTCTCAGTCTCTCACTATAGCAGAGTATATAAAGCGAAGAGCAAAAGAAGCAGTTGGAGCAGATGAAACTCCATGCGGAGGTTGGTCTGTGACAAGATTGCGCTCTGCTGCTCGTGGAACTCTAAATGTTCCAGGATTGAATTTGAGCGTTGGCCCAAAAGGTGGACTTGGGGAGCATGGTGATGCTGTATCTCGTCAATTGATTCTCACAAAAGTTTCACTTGTTGAAAGACGCCCAGAGAACTATGAAGCTGTCATCGTTCGACCTTTATCTGCAGTAAATGCCCTTGTTCGATTTACTGAGGAGCCTCAGATGTTTGCAATTGAGTTCAATGATGGATGCCCCATCCATGTATATGCAAGCACCTCTCGTGATAGCTTACTTGCGGCAGTTCGTGATCTGTTGCAAACAGAAGGTCAATGTGCTTTGGCTGTGTTACCAAGACTGACGATGCCTGGCCATCGCATTGATCCACCTTGCGGTAGAGTTAATTTACAATTTGGACTACAACGGCCTATTGCAGATATGGAGAGTGCATCCATGCATTTGAAGCACTTAGCAGCAGCTGCCAAAGATGCAGTTTCTGAAGGTGGTTCCATTCCTGGATCAAGAGCTAAGCTCTGGCGCAGAATAAGAGAGTTCAATGCATGCATACCATATACTGGAGTCCCTCCTAACATAGAATTACCTGAGGTGACTTTGATGGCTTTAATAACAATGCTTCCAGCTACGCCAAATCTTCCTCCAGAGTCCCCTTCCTTGCCACCCCCTTCACCTAAAGCAGCTGCAACAGTCATGGGCTTTATTGCATGTTTACGTAGATTGTTGGCTTCAAGAACTGCAGCTTCACATGTCATGTCTTTTCCTGCTGCTGTTGGAAGAATAATGGGCTTACTCAGAAATGGTTCAGAGGGTGTAGCCGCTGAAGCTGCAGGCCTTATTGCAGTTCTTATTGGTGGTGGTCCTGGGGATACAAATATATTGACAGATTCTAAAGGTGAGCATTATGCCACAATCATGCACACAAAGTCAGTGTTGTTTGCGCAACAAGGTTATGTCATTATACTTGCCAATAGACTGAAGCCTATGTCTGTATCACCACTATTATCAATGGCCGTTGTTGAGGTTCTTGAGGCAATGATATGTGATCCACATGGTGAGACAACACAGTACCCAGTGTTTGTTGAACTATTACGCCAAGTAGCTGGTTTGAAACGTCGTTTGTTTGCATTGTTTGGACATCCTGCTGAAAGTGTTCGGGAAACAGTGGCTGTGATTATGCGTACAATTGCTGAAGAAGATGCAATTGCAGCAGAGTCCATGCGCGATGCTGCATTGCGTGATGGTGCTTTGTTGAGGCATTTATTGCATGCGTTCTTCCTTCCGGCTGGTGAGCGACGTGAGGTTAGTCGACAGCTTGTTGCTCTTTGGGCAGATTCGTATCAACCCGCTCTGGATTTATTGTCTAGAGTTCTGCCTCCTGGACTTGTTGCTTATTTGCACACAAAATCTGATGGAGTTCTATCAGAAGAGTCTAATCAAGAAGTTTCCTTGACCAGTAGAAGACAGAGACGCTTACTTCAACAGAGGAGAGGCCGTACCGGAAGAGGAGCAACATCCCAGGAGCATTCCTTGCCTTCTGTAAACAATTATGATGTGAATGACCCCATGACACAGACAAGTGGTGATGTCTCGAAAGTGTCAAATAACTATCAAAGATCTGCAATGGATCCAAATTCTGGACAGGCTCCGACCATTCAATCTTCTGGTGCTCAAACCGGTGAAAACTTGACTGGTGAAGTATCCTCTACTGGGGCTCCGCAAAGCAATAATACATCTATTGTGGCTTCAGCTGATGCTCCATCAACAGGTGTTCATGCTTCATTGGCAGCAAATACTGCAATCTCAACAGATTCTGACTCCAATGTTGCTGGTTTCCATAATACGGGTCTCCCTGCCCCTGCTCAGGTTGTTGTGGAAAACACTCCTGTGGGATCCGGTAGGCTTCTGTGTAATTGGCCTGAATTCTGGCGAGCATTTAGCCTTGATCATAATCGTGCAGATTTGATCTGGAATGAGCGTACCAGGCAAGAGTTAAGGGAGGCCTTGCAGGCTGAGGTTCATAAGTTAGATGTTGAGAAGGAGCGTACAGAAGATATTGTTCCAAGAGGTTCTACAGTAGAGATGGCTGGGCAAGATAGTGTGCCGCAGATATCTTGGAACTACTCTGAGTTCTCTGTCGGATATCCTAGTTTGTCTAAAGAAGTTTGTGTGGGTCAGTATTATCTCCGCTTGCTGCTTGAGAGTGGCAGTGGTGGCAGGGCACAAGAATTTCCACTGCGTGATCCTGTTGCCTTCTTTAGAGCACTCTATCATCGTTTCTTATGTGATGCAGACATAGGGCTTACAGTAGATGGTGCTGTTCCGGATGAAATGGGTGCATCTGATGATTGGTGCGACATGGGAAGACTAGATGGTTTTGGAGGTGGAGGGGGATTTTCAGTTAGGGAGCTTTGTGCAAGAGCAATGACAATTGTATATGAACAGCATTACAAAACAGTAGGTCCCTTTGAGGGTACTGCTCACATTACAGTTCTGTTGGACAGGACAGATGATAGGGCTTTGAGGCACCGCCTTCTGTTGCTTTTGAAGGCTTTAATGAAGGTGTTATCAAATGTGGAGGCTTGCGTCTTGGTTGGAGGATGTGTGCTAGGTGTTGACATGCTGACAGCTGTTCATGAAGCTTCTGAAAGGACGGCTATTCCTTTGCAATCCAACTTGATTGCTGCTACTGCCTTCATGGAACCGCTCAAGGAATGGATGTTTTTTGACAAGGAAGGAGCACAAGTTGGACCTGTTGAAAAGGATGCAATAAGAAGATTCTGGTCCAAGAAGGCAATTGATTGGACAACAAAGTGCTGGGCTTCTGGGATGCTAGACTGGAAGAGGTTACGTGATATTCGTGAACTTCGTTGGGCGCTAGCTGTTCGGGTTCCTGTTCTCACGCCAGCTCAGGTTGGGGAGGCGGCATTGTCCATATTGCATAGCATGGTATCTGCACATTCTGATTTAGATGATGCTGGAGAAATAGTTACCCCAACTCCTAGAGTAAAAAGGATATTGTCAAGTCCGCGTTGTCTTCCGCATATTGCTCAGGCCATGCTTTCTGGAGAACCAAGTATTGTAGAGAGTGCTGCTGCATTACTGAAGGCTGTTGTTACCAGAAATCCGAAGGCCATGATTCGTCTATACAGCACAGGCGCATTTTATTTTTCCCTGGCATATCCTGGATCAAATCTCCTTTCAATTGCCCAACTCTTTTCAGTGACTCATGTTCACCAAGCATTTCATGGTGGCGAAGATGCTGCAGTTTCCTCTTCCTTACCTCTGGCGAAACGCAGTGTATTGGGTGGGCTTCTTCCTGAATCTTTGCTGTATGTATTAGAGCGTAGTGGTCCAGGTGCATTTGCAGCTGCAATGGTATCTGATTCTGATACTCCAGAGATTATATGGACTCACAAGATGCGAGCAGATAATCTGATACGTCAGGTTTTGCAGCATCTTGGTGACTTTCCCCAGAAATTGTCACAGCACTGCCATTGTCTATATGAGTATGCTCCTATGCCGCCAGTGACATACCCAGAGCTAAGAGATGAAATGTGGTGTCACCGTTATTACCTCCGCAACTTATGTGATGAGATTAGATTTCCAAATTGGCCAATTGTTGAACATGTTGAGTTTCTACAGTCATTACTGGTAATGTGGCGTGAGGAACTTACAAGAAGACCGATGGATCTTTCTGAGGAAGAAGCTTGCAAAATATTAGAGATTTCCTTGGAAGATGTGTCAAGTGATGATGCCAATATGAAACGTTCTGTTGAGATGGTTGAGGATACGTCTAGCATATCCAAGCAGATTGAGAATATTGATGAAGAAAAGCTCAAGCGACAATATAGAAAACTTGCCATGAGATACCATCCAGACAAAAATCCTGAAGGAAGGGATAAGTTTCTTGCTGTACAGAAAGCTTATGAGCGCCTGCAGGCCACTATGCAAGGCTTGCAAGGCCCTCAGGCTTGGCGGTTGTTGCTTTTATTGAAAGGGCAATGCATCTTGTACAGAAGATATGGAGATATATTGGAACCGTTTAAATATGCTGGGTATCCGATGTTGCTCAGTGCAGTTACTGTGGACAAGGATGATAACAATTTTCTTTCCTTAGAGAGAGCACCTCTCCTTGTTGCAGCATCAGAGCTTATTTGGCTTACGTGTGCATCTTCTTCATTGAATGGTGAAGAGCTTGTGAGGGATGGTGGCATACAACTTCTTGGAAATCTTCTTTCCCGTTGCATGTGTGTAGTTCAGCCAACTACTCCTGCAAGTGAACCATCTGCCATAATTGTTACAAATGTTATGCGCACCTTCTGTGTTTTGAGTCAATTTGAGAGTGCCTGGGCAGAGATACTTGAATATTCTGGACTAGTTGATGATATTGTGCACTGCACTGAGCTGGAGCTTGTACCTGCTGCTGTAGATGCTGCCCTCCAGACTATTGCCCATGTTTCTGTGTCTACTCAATTGCAAGATGCCTTGCTTAAGGCTGGTGTCTTATGGTACCTTTTGCCCGTGCTGCTTCAGTATGACTCTACTGCAGAGGAATCTGATACAACAGAATCACATGGTGTTGGTGCTAGCGTACAGATTGCCAAAAATATGCATGCTATACGTGCATCACAGGCGCTATCAAGGCTTAGTGGTTTGTGTAGTAATGAGAGTTCAACACCTTATAATCAGACTGCAGCTGATGCTCTCAGAGCTTTGTTGACTCCAAAACTTGCCAGTATGTTAAAAGATCAAGCTCCTAAAGACCTACTGTCAAAATTAAACAATAACTTGGAGTCTCCAGAGATTATCTGGAACTCTTCCACCCGAGCAGAACTACTGAAGTTTGTGGATCAGCAACGTGCAAGTCAGGGTCCAGACGGCTCATATGACCTGAAAGATTCGCATATGTTTGTGTACAAGGCACTGTCAAAAGAACTTTATGTTGGCAATGTTTACTTGAGGGTGTATAACAATCAGCCCGATTTTGATATTAGTGAACCAGAGGCTTTCTGTGTCGCTTTAATTGATTTTATATCATATCTAGTACACAATCAATGTTCTCAAGATTCAGAAGTTCACGATGAGCCAAATCAGGATGGCTCATCCCTTGAAACATCTGAGCATCCTAATGATATGGCTATTAGATCAGTGGATGAACTTAGTGCTCCAGTTGAAGATTTGACAGTATCCAACGGCAAAGTGGCAGACAAAGAAGAATCTAAAGTGGTCAAAAACCTTAAGTTTGCATTGAATTCACTCAAGAACATACTGACAAGCAGTCCAAATTTGGCGTCAATTTTTTCTACTAAAGACAAGCTTTTACCTCTTTTTGAATGCTTCTCTGTGCCTGTTGCACCAGAAAGTAACATACCTCAACTTTGCCTGAGTGTGTTGTCACTCTTGACAACATATGCTCCCTGCTTGGAGGCTATGGTTGCAGATGGATCTAGCCTTCTCCTTTTATTGCAAATGCTTCACTCAGCCCCAAGTTGTCGTGAGGGGGTTCTTCATGTTCTATATGCTCTGGCAAGCACACCAGAGCTTGCTTGGGCAGCTGCCAAGCATGGAGGAGTGGTCTACATTCTTGAGCTTCTCTTGCCTTTGCAGGAAGAAATTTCCTTGCAGCAAAGAGCAGCTGCAGCCTCTTTATTGGGGAAGCTTGTTGGGCAGCCAATGCATGGGCCAAGAGTTGCTATAACGCTAGCAAGGTTTCTTCCTGATGGCTTGGTATCAGTTATTAGGGATGGACCTGGTGAAGCTGTTGTAATTGCCCTTGAACAGACTACTGAGACTCCAGAACTTGTATGGACACCAGCGATGGCTACTTCTCTGTCTGCACAAATCGCGACGATGGCAGCAGATCTATACCAAGAACAAATGAAAGGCCGTGTTGTTGACTGGGACGTACCTGAGCAGGCATCTGGGCAGCAAGAAATGAGAGATGAGCCGCAGGTTGGTGGAATATATATTAGGTTATTCTTAAAAGATCCTAAATTCCCTCTCAGAAATCCAAAGAGGTTCTTGGAAGGACTGCTAGATCAGTATTTGACATCCATTGCCGCCACACATTATGAAACACAAGCTGTCGACCCTGAACTTCCTTTGCTCCTGTCTGCTGCTTTGGTTTCATTATTGCGAGTACATCCTGCCCTTGCAGATCATGTTGGATACCTTGGATATGTGCCCAAACTAGTGGCTGCTGTGGCTTATGAAGGAAGACGAGAAACAATGGCATCGGGGGAGGTGAACAATGGAAACTATGTGGACAGAGCAGAGGAGTCTGATGATACACAGCCTGCCCAAACTCCCCAAGAACGTGTGCGCCTCAGTTGTCTGCGTGTTCTACATCAATTGGCAGCTAGCACCACATGTGCTGAAGCTATGGCAGCAACTAGTGTAGGAACACCTCAGGTCGTTCCTCTTCTAATGAAAGCTATAGGATGGCAAGGTGGAAGCATACTAGCTCTGGAGACCCTAAAGCGTGTTGTTGTTGCTGGAAACCGAGCTAGGGATGCACTCGTTGCACAAGGACTTAAGGTTGGTCTTGTTGAAGTACTTCTTGGCCTTCTTGATTGGAGAGCTGGGGGAAGGAATGGACTTTGCTCTCAGATGAAGTGGAATGAATCTGAAGCATCTATTGGCAGAGTGCTAGCAATTGAGGTTTTGCATGCATTCGCGACGGAGGGGGCCCACTGTACTAAAGTGCGGGACTTATTGAATTCCTCAGATGTTTGGAGTGCTTATAAAGATCAGAAACATGATCTTTTCCTTCCTTCAAGTGCTCAATCTGCTGCCGCTGGAATTGCTGGGCTAATAGAAAATTCATCATCAAGACTCACTTATGCCATTACAGCTCCTCCACCACAACCCTCTACATCGAGACCTCCTGCGTCAACTACATTTGAATCAAATGGAAGATATGATCAGCTATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
QLQ WRC

Protein Analysis

2579

Amino Acids

281.99

Weight (kDa)

5.83

Isoelectric Point (pI)

46.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RME-8_N PF19432 23 - 246 7e-22 DNAJ protein RME-8 N-terminal
RME-8_N PF19432 292 - 746 6.7e-56 DNAJ protein RME-8 N-terminal
RME-8_N PF19432 904 - 1002 1.4e-24 DNAJ protein RME-8 N-terminal
GYF_2 PF14237 1175 - 1223 1.8e-12 GYF domain 2
DnaJ PF00226 1541 - 1581 4.1e-10 DnaJ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 5487, 7548
Acc16I TGCGCA 2 cut(s) 1743, 5117
Acc36I ACCTGC 2 cut(s) 5230, 6745
Acc65I GGTACC 1 cut(s) 5313
AccB1I GGYRCC 2 cut(s) 3327, 5313
AccB7I CCANNNNNTGG 4 cut(s) 860, 1361, 2438, 6482
AccBSI CCGCTC 2 cut(s) 2150, 3508
AccI GTMKAC 4 cut(s) 2110, 5270, 6381, 6891
AccIII TCCGGA 1 cut(s) 3124
AclI AACGTT 1 cut(s) 4570
AcoI YGGCCR 5 cut(s) 97, 220, 1156, 1812, 4415
AcyI GRCGYC 2 cut(s) 931, 6095
AdeI CACNNNGTG 3 cut(s) 1856, 3041, 5381
AflII CTTAAG 3 cut(s) 5294, 6041, 7337
AflIII ACRYGT 5 cut(s) 1549, 4429, 4967, 7120, 7172
AgeI ACCGGT 1 cut(s) 2477
AhdI GACNNNNNGTC 2 cut(s) 5572, 6081
AhlI ACTAGT 3 cut(s) 5179, 6994, 7196
AjiI CACGTC 1 cut(s) 2099
AjuI GAANNNNNNNTTGG 6 cut(s) 5730, 5762, 7347, 7379, 7425, 7457
AleI CACNNNNGTG 1 cut(s) 2687
Alw21I GWGCWC 8 cut(s) 236, 2473, 3067, 3544, 4930, 5199, 5971, 7588
Alw44I GTGCAC 1 cut(s) 5195
AlwNI CAGNNNCTG 5 cut(s) 1265, 1283, 1970, 2615, 4886
Ama87I CYCGRG 2 cut(s) 124, 5628
Aor13HI TCCGGA 1 cut(s) 3124
ApaI GGGCCC 1 cut(s) 7495
ApaLI GTGCAC 1 cut(s) 5195
ArsI GACNNNNNNTTYG 4 cut(s) 1099, 1131, 6080, 6112
AsiGI ACCGGT 1 cut(s) 2477
Asp700I GAANNNNTTC 3 cut(s) 1603, 1953, 7359
Asp718I GGTACC 1 cut(s) 5313
AsuNHI GCTAGC 5 cut(s) 3679, 5390, 6505, 7163, 7453
AvaI CYCGRG 2 cut(s) 124, 5628
AvaII GGWCC 9 cut(s) 4, 148, 1661, 3263, 3551, 3585, 4154, 5675, 6551
AxyI CCTNAGG 3 cut(s) 1389, 4770, 7212
BaeGI GKGCMC 4 cut(s) 3025, 5199, 6990, 7495
BalI TGGCCA 2 cut(s) 1158, 4417
BamHI GGATCC 2 cut(s) 2428, 2693
BanI GGYRCC 2 cut(s) 3327, 5313
BanII GRGCYC 3 cut(s) 236, 2518, 7495
BauI CACGAG 3 cut(s) 88, 810, 1068
BbsI GAAGAC 5 cut(s) 2269, 3172, 3830, 4489, 7027
Bbv12I GWGCWC 8 cut(s) 236, 2473, 3067, 3544, 4930, 5199, 5971, 7588
BbvCI CCTCAGC 1 cut(s) 2814
BceAI ACGGC 9 cut(s) 149, 283, 1226, 1799, 2280, 3471, 5698, 6013, 6675
BcgI CGANNNNNNTGC 2 cut(s) 4046, 4080
BciVI GTATCC 6 cut(s) 1663, 2512, 4585, 4872, 6001, 6965
BclI TGATCA 2 cut(s) 2746, 7726
BcuI ACTAGT 3 cut(s) 5179, 6994, 7196
BfoI RGCGCY 4 cut(s) 132, 3680, 4738, 5441
BfrI CTTAAG 3 cut(s) 5294, 6041, 7337
BfuAI ACCTGC 2 cut(s) 5230, 6745
BfuI GTATCC 6 cut(s) 1663, 2512, 4585, 4872, 6001, 6965
BglI GCCNNNNNGGC 1 cut(s) 2810
BglII AGATCT 2 cut(s) 2417, 6664
BlpI GCTNAGC 1 cut(s) 1314
BmcAI AGTACT 1 cut(s) 7359
Bme18I GGWCC 9 cut(s) 4, 148, 1661, 3263, 3551, 3585, 4154, 5675, 6551
BmeRI GACNNNNNGTC 2 cut(s) 5572, 6081
BmeT110I CYCGRG 2 cut(s) 124, 5628
BmgBI CACGTC 1 cut(s) 2099
BmrI ACTGGG 3 cut(s) 1868, 2520, 6712
BmtI GCTAGC 5 cut(s) 3683, 5394, 6509, 7167, 7457
BmuI ACTGGG 3 cut(s) 1868, 2520, 6712
BpiI GAAGAC 5 cut(s) 2269, 3172, 3830, 4489, 7027
BplI GAGNNNNNCTC 6 cut(s) 1302, 1334, 4915, 4947, 4917, 4949
Bpu10I CCTNAGC 5 cut(s) 2664, 2814, 3711, 3852, 6714
Bpu1102I GCTNAGC 1 cut(s) 1314
BpuEI CTTGAG 8 cut(s) 1850, 3020, 3494, 4625, 5782, 5850, 6047, 6410
BsaAI YACGTR 4 cut(s) 1517, 3653, 4968, 5426
BsaBI GATNNNNATC 2 cut(s) 2139, 2751
BsaHI GRCGYC 2 cut(s) 931, 6095
BsaI GGTCTC 4 cut(s) 465, 2654, 7268, 7678
BsaJI CCNNGG 7 cut(s) 144, 1664, 2319, 3975, 4533, 5151, 6976
BsaWI WCCGGW 4 cut(s) 2300, 2477, 2696, 3124
Bse118I RCCGGY 2 cut(s) 351, 2477
Bse21I CCTNAGG 3 cut(s) 1389, 4770, 7212
Bse3DI GCAATG 9 cut(s) 639, 1842, 2033, 2430, 3231, 4182, 4811, 5758, 6858
Bse8I GATNNNNATC 2 cut(s) 2139, 2751
BseAI TCCGGA 1 cut(s) 3124
BseDI CCNNGG 7 cut(s) 144, 1664, 2319, 3975, 4533, 5151, 6976
BseJI GATNNNNATC 2 cut(s) 2139, 2751
BseMI GCAATG 9 cut(s) 639, 1842, 2033, 2430, 3231, 4182, 4811, 5758, 6858
BsePI GCGCGC 1 cut(s) 65
BseRI GAGGAG 6 cut(s) 1016, 2302, 2322, 6387, 7094, 7650
BseSI GKGCMC 4 cut(s) 3025, 5199, 6990, 7495
BseX3I CGGCCG 2 cut(s) 97, 220
BseYI CCCAGC 6 cut(s) 355, 2888, 3618, 4856, 7385, 7610
BsgI GTGCAG 5 cut(s) 2778, 3741, 4899, 5185, 6624
Bsh1285I CGRYCG 2 cut(s) 100, 223
BshNI GGYRCC 2 cut(s) 3327, 5313
BshTI ACCGGT 1 cut(s) 2477
BsiEI CGRYCG 2 cut(s) 100, 223
BsiHKAI GWGCWC 8 cut(s) 236, 2473, 3067, 3544, 4930, 5199, 5971, 7588
BsiHKCI CYCGRG 2 cut(s) 124, 5628
BsiSI CCGG 7 cut(s) 352, 391, 2084, 2301, 2478, 2697, 3125
BsiWI CGTACG 1 cut(s) 177
BslFI GGGAC 5 cut(s) 1352, 1435, 3249, 6719, 7526
BsmBI CGTCTC 1 cut(s) 2263
BsmFI GGGAC 5 cut(s) 1352, 1435, 3249, 6719, 7526
BsmI GAATGC 3 cut(s) 2326, 6143, 7475
Bso31I GGTCTC 4 cut(s) 465, 2654, 7268, 7678
BsoBI CYCGRG 2 cut(s) 124, 5628
Bsp120I GGGCCC 1 cut(s) 7491
Bsp13I TCCGGA 1 cut(s) 3124
Bsp1407I TGTACA 3 cut(s) 4717, 4815, 5718
Bsp1720I GCTNAGC 1 cut(s) 1314
Bsp68I TCGCGA 2 cut(s) 6650, 7481
BspEI TCCGGA 1 cut(s) 3124
BspHI TCATGA 1 cut(s) 3436
BspMAI CTGCAG 8 cut(s) 976, 1543, 1633, 4069, 4743, 5353, 5500, 6445
BspMI ACCTGC 2 cut(s) 5230, 6745
BspOI GCTAGC 5 cut(s) 3683, 5394, 6509, 7167, 7457
BspQI GCTCTTC 3 cut(s) 42, 730, 4989
BspT107I GGYRCC 2 cut(s) 3327, 5313
BspTI CTTAAG 3 cut(s) 5294, 6041, 7337
BspTNI GGTCTC 4 cut(s) 465, 2654, 7268, 7678
BsrBI CCGCTC 2 cut(s) 2150, 3508
BsrDI GCAATG 9 cut(s) 639, 1842, 2033, 2430, 3231, 4182, 4811, 5758, 6858
BsrFI RCCGGY 2 cut(s) 351, 2477
BsrGI TGTACA 3 cut(s) 4717, 4815, 5718
BssAI RCCGGY 2 cut(s) 351, 2477
BssECI CCNNGG 7 cut(s) 144, 1664, 2319, 3975, 4533, 5151, 6976
BssHII GCGCGC 1 cut(s) 65
BssNI GRCGYC 2 cut(s) 931, 6095
BssSI CACGAG 3 cut(s) 88, 810, 1068
BssT1I CCWWGG 3 cut(s) 144, 4533, 6976
Bst2BI CACGAG 3 cut(s) 88, 810, 1068
Bst6I CTCTTC 9 cut(s) 42, 730, 2223, 2299, 3638, 4081, 4989, 5626, 7230
BstACI GRCGYC 2 cut(s) 931, 6095
BstAFI CTTAAG 3 cut(s) 5294, 6041, 7337
BstAPI GCANNNNNTGC 9 cut(s) 980, 1265, 2065, 2332, 2597, 4759, 5504, 6478, 7325
BstAUI TGTACA 3 cut(s) 4717, 4815, 5718
BstBAI YACGTR 4 cut(s) 1517, 3653, 4968, 5426
BstH2I RGCGCY 4 cut(s) 132, 3680, 4738, 5441
BstMCI CGRYCG 2 cut(s) 100, 223
BstSLI GKGCMC 4 cut(s) 3025, 5199, 6990, 7495
BstSNI TACGTA 1 cut(s) 1517
BstV2I GAAGAC 5 cut(s) 2269, 3172, 3830, 4489, 7027
BstX2I RGATCY 7 cut(s) 2417, 2428, 2693, 4492, 6248, 6664, 6790
BstXI CCANNNNNNTGG 2 cut(s) 1904, 6997
BstYI RGATCY 7 cut(s) 2417, 2428, 2693, 4492, 6248, 6664, 6790
BstZI CGGCCG 2 cut(s) 97, 220
Bsu36I CCTNAGG 3 cut(s) 1389, 4770, 7212
BsuI GTATCC 6 cut(s) 1663, 2512, 4585, 4872, 6001, 6965
BtgZI GCGATG 3 cut(s) 1145, 2040, 6635
BtrI CACGTC 1 cut(s) 2099
BtsI GCAGTG 5 cut(s) 3016, 3035, 4105, 4291, 5197
BtuMI TCGCGA 2 cut(s) 6650, 7481
BveI ACCTGC 2 cut(s) 5230, 6745
CaiI CAGNNNCTG 5 cut(s) 1265, 1283, 1970, 2615, 4886
CciI TCATGA 1 cut(s) 3436
CciNI GCGGCCGC 1 cut(s) 97
Cfr10I RCCGGY 2 cut(s) 351, 2477
CseI GACGC 6 cut(s) 177, 939, 2280, 3376, 6084, 7683
CsiI ACCWGGT 1 cut(s) 6553
CspAI ACCGGT 1 cut(s) 2477
DraI TTTAAA 3 cut(s) 421, 462, 4849
DraIII CACNNNGTG 3 cut(s) 1856, 3041, 5381
DriI GACNNNNNGTC 2 cut(s) 5572, 6081
EaeI YGGCCR 5 cut(s) 97, 220, 1156, 1812, 4415
EagI CGGCCG 2 cut(s) 97, 220
Eam1104I CTCTTC 9 cut(s) 42, 730, 2223, 2299, 3638, 4081, 4989, 5626, 7230
Eam1105I GACNNNNNGTC 2 cut(s) 5572, 6081
EarI CTCTTC 9 cut(s) 42, 730, 2223, 2299, 3638, 4081, 4989, 5626, 7230
Ecl136II GAGCTC 1 cut(s) 234
EclXI CGGCCG 2 cut(s) 97, 220
Eco105I TACGTA 1 cut(s) 1517
Eco130I CCWWGG 3 cut(s) 144, 4533, 6976
Eco147I AGGCCT 2 cut(s) 1635, 2804
Eco24I GRGCYC 3 cut(s) 236, 2518, 7495
Eco31I GGTCTC 4 cut(s) 465, 2654, 7268, 7678
Eco32I GATATC 2 cut(s) 2913, 2945
Eco47I GGWCC 9 cut(s) 4, 148, 1661, 3263, 3551, 3585, 4154, 5675, 6551
Eco52I CGGCCG 2 cut(s) 97, 220
Eco53kI GAGCTC 1 cut(s) 234
Eco81I CCTNAGG 3 cut(s) 1389, 4770, 7212
Eco88I CYCGRG 2 cut(s) 124, 5628
EcoICRI GAGCTC 1 cut(s) 234
EcoO109I RGGNCCY 3 cut(s) 3263, 4766, 7491
EcoRI GAATTC 3 cut(s) 2723, 6055, 7522
EcoRV GATATC 2 cut(s) 2913, 2945
EcoT14I CCWWGG 3 cut(s) 144, 4533, 6976
EcoT22I ATGCAT 7 cut(s) 1245, 1348, 1352, 4811, 5418, 6483, 7477
EcoT38I GRGCYC 3 cut(s) 236, 2518, 7495
ErhI CCWWGG 3 cut(s) 144, 4533, 6976
Esp3I CGTCTC 1 cut(s) 2263
FaqI GGGAC 5 cut(s) 1352, 1435, 3249, 6719, 7526
FauI CCCGC 2 cut(s) 2155, 7503
FauNDI CATATG 4 cut(s) 583, 5689, 5709, 6214
FbaI TGATCA 2 cut(s) 2746, 7726
FblI GTMKAC 4 cut(s) 2110, 5270, 6381, 6891
FriOI GRGCYC 3 cut(s) 236, 2518, 7495
FspAI RTGCGCAY 1 cut(s) 5117
FspI TGCGCA 2 cut(s) 1743, 5117
GsaI CCCAGC 6 cut(s) 359, 2892, 3622, 4860, 7389, 7614
HaeII RGCGCY 4 cut(s) 132, 3680, 4738, 5441
HapII CCGG 7 cut(s) 352, 391, 2084, 2301, 2478, 2697, 3125
HgaI GACGC 6 cut(s) 177, 939, 2280, 3376, 6084, 7683
Hin1I GRCGYC 2 cut(s) 931, 6095
HincII GTYRAC 6 cut(s) 2111, 3418, 5523, 6700, 6892, 7698
HindII GTYRAC 6 cut(s) 2111, 3418, 5523, 6700, 6892, 7698
HindIII AAGCTT 6 cut(s) 600, 3441, 4509, 4725, 6119, 6461
HpaII CCGG 7 cut(s) 352, 391, 2084, 2301, 2478, 2697, 3125
Hpy99I CGWCG 9 cut(s) 185, 188, 193, 230, 399, 1920, 2100, 6655, 7486
Hsp92I GRCGYC 2 cut(s) 931, 6095
Kpn2I TCCGGA 1 cut(s) 3124
KpnI GGTACC 1 cut(s) 5317
Ksp22I TGATCA 2 cut(s) 2746, 7726
LguI GCTCTTC 3 cut(s) 42, 730, 4989
MabI ACCWGGT 1 cut(s) 6553
MbiI CCGCTC 2 cut(s) 2150, 3508
MflI RGATCY 7 cut(s) 2417, 2428, 2693, 4492, 6248, 6664, 6790
MlsI TGGCCA 2 cut(s) 1158, 4417
MluNI TGGCCA 2 cut(s) 1158, 4417
Mox20I TGGCCA 2 cut(s) 1158, 4417
Mph1103I ATGCAT 7 cut(s) 1245, 1348, 1352, 4811, 5418, 6483, 7477
MroI TCCGGA 1 cut(s) 3124
MroXI GAANNNNTTC 3 cut(s) 1603, 1953, 7359
MscI TGGCCA 2 cut(s) 1158, 4417
MslI CAYNNNNRTG 7 cut(s) 879, 1053, 1715, 2687, 2754, 4263, 5931
Msp20I TGGCCA 2 cut(s) 1158, 4417
MspCI CTTAAG 3 cut(s) 5294, 6041, 7337
MspI CCGG 7 cut(s) 352, 391, 2084, 2301, 2478, 2697, 3125
Mva1269I GAATGC 3 cut(s) 2326, 6143, 7475
NdeI CATATG 4 cut(s) 583, 5689, 5709, 6214
NheI GCTAGC 5 cut(s) 3679, 5390, 6505, 7163, 7453
NotI GCGGCCGC 1 cut(s) 97
NruI TCGCGA 2 cut(s) 6650, 7481
NsbI TGCGCA 2 cut(s) 1743, 5117
NsiI ATGCAT 7 cut(s) 1245, 1348, 1352, 4811, 5418, 6483, 7477
OliI CACNNNNGTG 1 cut(s) 2687
PaeI GCATGC 4 cut(s) 1350, 2072, 5420, 7475
PaeR7I CTCGAG 1 cut(s) 124
PagI TCATGA 1 cut(s) 3436
PauI GCGCGC 1 cut(s) 65
PceI AGGCCT 2 cut(s) 1635, 2804
PciI ACATGT 3 cut(s) 1549, 4429, 7172
PciSI GCTCTTC 3 cut(s) 42, 730, 4989
PcsI WCGNNNNNNNCGW 3 cut(s) 225, 3658, 3667
PctI GAATGC 3 cut(s) 2326, 6143, 7475
PdmI GAANNNNTTC 3 cut(s) 1603, 1953, 7359
Pfl23II CGTACG 1 cut(s) 177
PflMI CCANNNNNTGG 4 cut(s) 860, 1361, 2438, 6482
PfoI TCCNGGA 4 cut(s) 829, 1300, 2179, 3985
PinAI ACCGGT 1 cut(s) 2477
Ppu21I YACGTR 4 cut(s) 1517, 3653, 4968, 5426
PpuMI RGGWCCY 1 cut(s) 3263
PscI ACATGT 3 cut(s) 1549, 4429, 7172
PsiI TTATAA 2 cut(s) 5487, 7548
Psp124BI GAGCTC 1 cut(s) 236
Psp1406I AACGTT 1 cut(s) 4570
Psp5II RGGWCCY 1 cut(s) 3263
PspFI CCCAGC 6 cut(s) 355, 2888, 3618, 4856, 7385, 7610
PspLI CGTACG 1 cut(s) 177
PspOMI GGGCCC 1 cut(s) 7491
PspPPI RGGWCCY 1 cut(s) 3263
PsrI GAACNNNNNNTAC 2 cut(s) 5458, 5490
PstI CTGCAG 8 cut(s) 976, 1543, 1633, 4069, 4743, 5353, 5500, 6445
PstNI CAGNNNCTG 5 cut(s) 1265, 1283, 1970, 2615, 4886
PsuI RGATCY 7 cut(s) 2417, 2428, 2693, 4492, 6248, 6664, 6790
PteI GCGCGC 1 cut(s) 65
PvuII CAGCTG 8 cut(s) 1265, 1484, 2552, 3431, 4172, 5501, 6359, 6440
RruI TCGCGA 2 cut(s) 6650, 7481
RseI CAYNNNNRTG 7 cut(s) 879, 1053, 1715, 2687, 2754, 4263, 5931
SacI GAGCTC 1 cut(s) 236
SalI GTCGAC 2 cut(s) 2109, 6890
SapI GCTCTTC 3 cut(s) 42, 730, 4989
SbfI CCTGCAGG 1 cut(s) 4743
ScaI AGTACT 1 cut(s) 7359
SdaI CCTGCAGG 1 cut(s) 4743
SexAI ACCWGGT 1 cut(s) 6553
Sfr274I CTCGAG 1 cut(s) 124
SinI GGWCC 9 cut(s) 4, 148, 1661, 3263, 3551, 3585, 4154, 5675, 6551
SlaI CTCGAG 1 cut(s) 124
SmiMI CAYNNNNRTG 7 cut(s) 879, 1053, 1715, 2687, 2754, 4263, 5931
SnaBI TACGTA 1 cut(s) 1517
SpeI ACTAGT 3 cut(s) 5179, 6994, 7196
SphI GCATGC 4 cut(s) 1350, 2072, 5420, 7475
Sse8387I CCTGCAGG 1 cut(s) 4743
SseBI AGGCCT 2 cut(s) 1635, 2804
SspI AATATT 3 cut(s) 4521, 4624, 5171
SstI GAGCTC 1 cut(s) 236
StuI AGGCCT 2 cut(s) 1635, 2804
StyI CCWWGG 3 cut(s) 144, 4533, 6976
TaqII GACCGA 2 cut(s) 341, 4501
TatI WGTACW 7 cut(s) 4717, 4815, 5718, 5848, 6943, 7357, 7499
TspGWI ACGGA 2 cut(s) 412, 7499
Van91I CCANNNNNTGG 4 cut(s) 860, 1361, 2438, 6482
Vha464I CTTAAG 3 cut(s) 5294, 6041, 7337
VneI GTGCAC 1 cut(s) 5195
VpaK11BI GGWCC 9 cut(s) 4, 148, 1661, 3263, 3551, 3585, 4154, 5675, 6551
XbaI TCTAGA 1 cut(s) 2165
XcmI CCANNNNNNNNNTGG 8 cut(s) 142, 777, 4046, 4206, 5610, 6001, 6348, 6606
XhoI CTCGAG 1 cut(s) 124
XmiI GTMKAC 4 cut(s) 2110, 5270, 6381, 6891
XmnI GAANNNNTTC 3 cut(s) 1603, 1953, 7359
ZrmI AGTACT 1 cut(s) 7359
Zsp2I ATGCAT 7 cut(s) 1245, 1348, 1352, 4811, 5418, 6483, 7477
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.