RING-H2 finger protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G20823 AT1G76410 |
| fragaria_vesca | FvH4_1g10140 |
| malus_domestica | MD02G1113400.v1.1 MD06G1005400.v1.1 MD15G1228600.v1.1 |
| prunus_persica | Prupe.5G006700_v2.0.a1 Prupe.7G185500_v2.0.a1 |
| pyrus_communis | pycom02g08840 |
| rosa_chinensis | RchiOBHm_Chr2g0096911 |
| rosa_laevigata | RLG00000016682 |
| rosa_multiflora | Rmu_sc0033632.1_g000003 Rmu_ssc0000215.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00145160 |
| rosa_rugosa | Rorug02G0061800 |
| rosa_samantha | Rh2AG109800 Rh2BG111700 Rh2CG113800 Rh2DG112900 |
| rosa_wichuraiana | Rw2G008480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2822 |
| AccB1I | GGYRCC | 1 cut(s) | 1834 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 801 |
| AccI | GTMKAC | 1 cut(s) | 1417 |
| AccII | CGCG | 2 cut(s) | 109, 1908 |
| AciI | CCGC | 4 cut(s) | 109, 746, 1066, 2875 |
| AclWI | GGATC | 9 cut(s) | 51, 1458, 1520, 1712, 1727, 2099, 2366, 2772, 2785 |
| AcsI | RAATTY | 7 cut(s) | 144, 995, 1349, 1747, 2064, 2570, 2832 |
| AcuI | CTGAAG | 2 cut(s) | 357, 2636 |
| AcyI | GRCGYC | 1 cut(s) | 123 |
| AfaI | GTAC | 6 cut(s) | 884, 1024, 1823, 1957, 2186, 2276 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 83, 493, 494, 801, 906, 1831, 2411, 2675 |
| AflIII | ACRYGT | 1 cut(s) | 1336 |
| AjnI | CCWGG | 3 cut(s) | 634, 1570, 2194 |
| AleI | CACNNNNGTG | 1 cut(s) | 2208 |
| Alw21I | GWGCWC | 3 cut(s) | 1169, 2487, 2721 |
| Alw26I | GTCTC | 6 cut(s) | 320, 470, 596, 633, 785, 1874 |
| AlwI | GGATC | 9 cut(s) | 51, 1458, 1520, 1712, 1727, 2099, 2366, 2772, 2785 |
| Ama87I | CYCGRG | 2 cut(s) | 493, 1584 |
| AoxI | GGCC | 4 cut(s) | 305, 1259, 1627, 2229 |
| ApeKI | GCWGC | 4 cut(s) | 13, 31, 1910, 2540 |
| ApoI | RAATTY | 7 cut(s) | 144, 995, 1349, 1747, 2064, 2570, 2832 |
| AseI | ATTAAT | 1 cut(s) | 2636 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1050 |
| AspLEI | GCGC | 1 cut(s) | 1910 |
| AspS9I | GGNCC | 6 cut(s) | 249, 647, 926, 1259, 2300, 2872 |
| AsuC2I | CCSGG | 2 cut(s) | 494, 495 |
| AsuHPI | GGTGA | 9 cut(s) | 335, 485, 510, 611, 827, 1003, 1128, 2222, 2357 |
| AsuNHI | GCTAGC | 1 cut(s) | 1271 |
| AvaI | CYCGRG | 2 cut(s) | 493, 1584 |
| AvaII | GGWCC | 5 cut(s) | 249, 647, 926, 2300, 2872 |
| AxyI | CCTNAGG | 2 cut(s) | 468, 2868 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1805, 1838 |
| BamHI | GGATCC | 1 cut(s) | 2777 |
| BanI | GGYRCC | 1 cut(s) | 1834 |
| BanII | GRGCYC | 3 cut(s) | 1169, 2487, 2721 |
| BauI | CACGAG | 1 cut(s) | 1884 |
| BbsI | GAAGAC | 4 cut(s) | 222, 2510, 2820, 2862 |
| Bbv12I | GWGCWC | 3 cut(s) | 1169, 2487, 2721 |
| BbvCI | CCTCAGC | 1 cut(s) | 2373 |
| BbvI | GCAGC | 4 cut(s) | 25, 43, 1922, 2552 |
| BceAI | ACGGC | 3 cut(s) | 100, 320, 1614 |
| BciT130I | CCWGG | 3 cut(s) | 636, 1572, 2196 |
| BclI | TGATCA | 2 cut(s) | 198, 310 |
| BcnI | CCSGG | 2 cut(s) | 494, 495 |
| BcoDI | GTCTC | 6 cut(s) | 320, 470, 596, 633, 785, 1874 |
| BfmI | CTRYAG | 1 cut(s) | 956 |
| BglII | AGATCT | 2 cut(s) | 1232, 2819 |
| BisI | GCNGC | 5 cut(s) | 14, 32, 1067, 1911, 2541 |
| BlsI | GCNGC | 5 cut(s) | 15, 33, 1068, 1912, 2542 |
| BmcAI | AGTACT | 2 cut(s) | 884, 1957 |
| Bme1390I | CCNGG | 5 cut(s) | 494, 495, 636, 1572, 2196 |
| Bme18I | GGWCC | 5 cut(s) | 249, 647, 926, 2300, 2872 |
| BmeT110I | CYCGRG | 2 cut(s) | 493, 1584 |
| BmgT120I | GGNCC | 6 cut(s) | 249, 647, 926, 1259, 2300, 2872 |
| BmiI | GGNNCC | 7 cut(s) | 251, 593, 927, 928, 1015, 1836, 2779 |
| BmrFI | CCNGG | 5 cut(s) | 494, 495, 636, 1572, 2196 |
| BmrI | ACTGGG | 2 cut(s) | 614, 1266 |
| BmsI | GCATC | 7 cut(s) | 96, 113, 430, 452, 1162, 1209, 2653 |
| BmtI | GCTAGC | 1 cut(s) | 1275 |
| BmuI | ACTGGG | 2 cut(s) | 614, 1266 |
| BpiI | GAAGAC | 4 cut(s) | 222, 2510, 2820, 2862 |
| BpmI | CTGGAG | 3 cut(s) | 657, 735, 1775 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2373 |
| BpuEI | CTTGAG | 4 cut(s) | 303, 372, 1562, 2347 |
| BpuMI | CCSGG | 2 cut(s) | 494, 495 |
| Bsa29I | ATCGAT | 1 cut(s) | 1944 |
| BsaAI | YACGTR | 1 cut(s) | 133 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1441, 2346 |
| BsaHI | GRCGYC | 1 cut(s) | 123 |
| BsaI | GGTCTC | 2 cut(s) | 633, 785 |
| BsaJI | CCNNGG | 9 cut(s) | 492, 493, 494, 595, 643, 900, 1003, 1825, 2405 |
| BsaWI | WCCGGW | 1 cut(s) | 2187 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 83, 493, 494, 801, 906, 1831, 2411, 2675 |
| Bse1I | ACTGG | 9 cut(s) | 334, 456, 620, 880, 1017, 1261, 1758, 2360, 2555 |
| Bse21I | CCTNAGG | 2 cut(s) | 468, 2868 |
| Bse3DI | GCAATG | 2 cut(s) | 514, 2272 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1441, 2346 |
| BseBI | CCWGG | 3 cut(s) | 636, 1572, 2196 |
| BseCI | ATCGAT | 1 cut(s) | 1944 |
| BseDI | CCNNGG | 9 cut(s) | 492, 493, 494, 595, 643, 900, 1003, 1825, 2405 |
| BseGI | GGATG | 5 cut(s) | 488, 631, 910, 2473, 2559 |
| BseJI | GATNNNNATC | 2 cut(s) | 1441, 2346 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 83, 493, 494, 801, 906, 1831, 2411, 2675 |
| BseMI | GCAATG | 2 cut(s) | 514, 2272 |
| BseMII | CTCAG | 7 cut(s) | 269, 476, 482, 1437, 1461, 2387, 2859 |
| BseNI | ACTGG | 9 cut(s) | 334, 456, 620, 880, 1017, 1261, 1758, 2360, 2555 |
| BseXI | GCAGC | 4 cut(s) | 25, 43, 1922, 2552 |
| BsgI | GTGCAG | 3 cut(s) | 32, 50, 285 |
| Bsh1236I | CGCG | 2 cut(s) | 109, 1908 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1694 |
| BshFI | GGCC | 4 cut(s) | 307, 1261, 1629, 2231 |
| BshNI | GGYRCC | 1 cut(s) | 1834 |
| BshVI | ATCGAT | 1 cut(s) | 1944 |
| BsiEI | CGRYCG | 1 cut(s) | 1694 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1169, 2487, 2721 |
| BsiHKCI | CYCGRG | 2 cut(s) | 493, 1584 |
| BsiSI | CCGG | 2 cut(s) | 494, 2188 |
| BslFI | GGGAC | 5 cut(s) | 246, 511, 912, 1530, 2110 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 83, 493, 494, 801, 906, 1831, 2411, 2675 |
| BsmAI | GTCTC | 6 cut(s) | 320, 470, 596, 633, 785, 1874 |
| BsmFI | GGGAC | 5 cut(s) | 246, 511, 912, 1530, 2110 |
| BsmI | GAATGC | 2 cut(s) | 1050, 1913 |
| BsnI | GGCC | 4 cut(s) | 307, 1261, 1629, 2231 |
| Bso31I | GGTCTC | 2 cut(s) | 633, 785 |
| BsoBI | CYCGRG | 2 cut(s) | 493, 1584 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1169, 2487, 2721 |
| Bsp19I | CCATGG | 2 cut(s) | 643, 1825 |
| BspACI | CCGC | 4 cut(s) | 109, 746, 1066, 2875 |
| BspANI | GGCC | 4 cut(s) | 307, 1261, 1629, 2231 |
| BspCNI | CTCAG | 7 cut(s) | 268, 475, 481, 1438, 1462, 2386, 2860 |
| BspDI | ATCGAT | 1 cut(s) | 1944 |
| BspFNI | CGCG | 2 cut(s) | 109, 1908 |
| BspHI | TCATGA | 1 cut(s) | 195 |
| BspLI | GGNNCC | 7 cut(s) | 251, 593, 927, 928, 1015, 1836, 2779 |
| BspOI | GCTAGC | 1 cut(s) | 1275 |
| BspPI | GGATC | 9 cut(s) | 51, 1458, 1520, 1712, 1727, 2099, 2366, 2772, 2785 |
| BspT107I | GGYRCC | 1 cut(s) | 1834 |
| BspTNI | GGTCTC | 2 cut(s) | 633, 785 |
| BsrDI | GCAATG | 2 cut(s) | 514, 2272 |
| BsrI | ACTGG | 9 cut(s) | 334, 456, 620, 880, 1017, 1261, 1758, 2360, 2555 |
| BssECI | CCNNGG | 9 cut(s) | 492, 493, 494, 595, 643, 900, 1003, 1825, 2405 |
| BssNAI | GTATAC | 1 cut(s) | 1418 |
| BssNI | GRCGYC | 1 cut(s) | 123 |
| BssSI | CACGAG | 1 cut(s) | 1884 |
| BssT1I | CCWWGG | 4 cut(s) | 643, 1003, 1825, 2405 |
| Bst1107I | GTATAC | 1 cut(s) | 1418 |
| Bst2BI | CACGAG | 1 cut(s) | 1884 |
| Bst2UI | CCWGG | 3 cut(s) | 636, 1572, 2196 |
| Bst6I | CTCTTC | 2 cut(s) | 286, 1872 |
| BstACI | GRCGYC | 1 cut(s) | 123 |
| BstBAI | YACGTR | 1 cut(s) | 133 |
| BstC8I | GCNNGC | 7 cut(s) | 11, 102, 116, 807, 1248, 1273, 1480 |
| BstDSI | CCRYGG | 3 cut(s) | 643, 900, 1825 |
| BstF5I | GGATG | 5 cut(s) | 488, 631, 910, 2473, 2559 |
| BstFNI | CGCG | 2 cut(s) | 109, 1908 |
| BstHHI | GCGC | 1 cut(s) | 1910 |
| BstMAI | GTCTC | 6 cut(s) | 320, 470, 596, 633, 785, 1874 |
| BstMCI | CGRYCG | 1 cut(s) | 1694 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 37, 106, 115, 1905, 2663 |
| BstNI | CCWGG | 3 cut(s) | 636, 1572, 2196 |
| BstNSI | RCATGY | 3 cut(s) | 809, 1250, 1340 |
| BstSCI | CCNGG | 5 cut(s) | 492, 493, 634, 1570, 2194 |
| BstSFI | CTRYAG | 1 cut(s) | 956 |
| BstUI | CGCG | 2 cut(s) | 109, 1908 |
| BstV1I | GCAGC | 4 cut(s) | 25, 43, 1922, 2552 |
| BstV2I | GAAGAC | 4 cut(s) | 222, 2510, 2820, 2862 |
| BstX2I | RGATCY | 7 cut(s) | 1232, 1450, 1717, 1732, 2358, 2777, 2819 |
| BstYI | RGATCY | 7 cut(s) | 1232, 1450, 1717, 1732, 2358, 2777, 2819 |
| BstZ17I | GTATAC | 1 cut(s) | 1418 |
| Bsu15I | ATCGAT | 1 cut(s) | 1944 |
| Bsu36I | CCTNAGG | 2 cut(s) | 468, 2868 |
| BsuRI | GGCC | 4 cut(s) | 307, 1261, 1629, 2231 |
| BsuTUI | ATCGAT | 1 cut(s) | 1944 |
| BtgI | CCRYGG | 3 cut(s) | 643, 900, 1825 |
| BtgZI | GCGATG | 2 cut(s) | 90, 1389 |
| BtsCI | GGATG | 5 cut(s) | 488, 631, 910, 2473, 2559 |
| BtsI | GCAGTG | 2 cut(s) | 1182, 2535 |
| BtsIMutI | CAGTG | 8 cut(s) | 341, 507, 1024, 1182, 1254, 1749, 1751, 2535 |
| Cac8I | GCNNGC | 7 cut(s) | 11, 102, 116, 807, 1248, 1273, 1480 |
| CciI | TCATGA | 1 cut(s) | 195 |
| CfoI | GCGC | 1 cut(s) | 1910 |
| Cfr13I | GGNCC | 6 cut(s) | 249, 647, 926, 1259, 2300, 2872 |
| Cfr9I | CCCGGG | 1 cut(s) | 493 |
| ClaI | ATCGAT | 1 cut(s) | 1944 |
| CseI | GACGC | 1 cut(s) | 131 |
| Csp6I | GTAC | 6 cut(s) | 883, 1023, 1822, 1956, 2185, 2275 |
| CviQI | GTAC | 6 cut(s) | 883, 1023, 1822, 1956, 2185, 2275 |
| DraI | TTTAAA | 1 cut(s) | 2392 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2822 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2822 |
| Eam1104I | CTCTTC | 2 cut(s) | 286, 1872 |
| EarI | CTCTTC | 2 cut(s) | 286, 1872 |
| Ecl136II | GAGCTC | 3 cut(s) | 1167, 2485, 2719 |
| Eco130I | CCWWGG | 4 cut(s) | 643, 1003, 1825, 2405 |
| Eco24I | GRGCYC | 3 cut(s) | 1169, 2487, 2721 |
| Eco31I | GGTCTC | 2 cut(s) | 633, 785 |
| Eco47I | GGWCC | 5 cut(s) | 249, 647, 926, 2300, 2872 |
| Eco53kI | GAGCTC | 3 cut(s) | 1167, 2485, 2719 |
| Eco57I | CTGAAG | 2 cut(s) | 357, 2636 |
| Eco81I | CCTNAGG | 2 cut(s) | 468, 2868 |
| Eco88I | CYCGRG | 2 cut(s) | 493, 1584 |
| EcoICRI | GAGCTC | 3 cut(s) | 1167, 2485, 2719 |
| EcoO109I | RGGNCCY | 1 cut(s) | 926 |
| EcoRI | GAATTC | 2 cut(s) | 1349, 1747 |
| EcoRII | CCWGG | 3 cut(s) | 634, 1570, 2194 |
| EcoT14I | CCWWGG | 4 cut(s) | 643, 1003, 1825, 2405 |
| EcoT22I | ATGCAT | 2 cut(s) | 445, 1224 |
| EcoT38I | GRGCYC | 3 cut(s) | 1169, 2487, 2721 |
| ErhI | CCWWGG | 4 cut(s) | 643, 1003, 1825, 2405 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 914, 946, 1038, 1070, 2389, 2421 |
| FaqI | GGGAC | 5 cut(s) | 246, 511, 912, 1530, 2110 |
| FauNDI | CATATG | 1 cut(s) | 2002 |
| FbaI | TGATCA | 2 cut(s) | 198, 310 |
| FblI | GTMKAC | 1 cut(s) | 1417 |
| Fnu4HI | GCNGC | 5 cut(s) | 14, 32, 1067, 1911, 2541 |
| FokI | GGATG | 5 cut(s) | 475, 618, 917, 2480, 2566 |
| FriOI | GRGCYC | 3 cut(s) | 1169, 2487, 2721 |
| Fsp4HI | GCNGC | 5 cut(s) | 14, 32, 1067, 1911, 2541 |
| GlaI | GCGC | 1 cut(s) | 1909 |
| GluI | GCNGC | 5 cut(s) | 14, 32, 1067, 1911, 2541 |
| GsuI | CTGGAG | 3 cut(s) | 657, 735, 1775 |
| HaeIII | GGCC | 4 cut(s) | 307, 1261, 1629, 2231 |
| HapII | CCGG | 2 cut(s) | 494, 2188 |
| HgaI | GACGC | 1 cut(s) | 131 |
| HhaI | GCGC | 1 cut(s) | 1910 |
| Hin1I | GRCGYC | 1 cut(s) | 123 |
| Hin6I | GCGC | 1 cut(s) | 1908 |
| HinP1I | GCGC | 1 cut(s) | 1908 |
| HindIII | AAGCTT | 3 cut(s) | 98, 390, 1869 |
| HpaII | CCGG | 2 cut(s) | 494, 2188 |
| HphI | GGTGA | 9 cut(s) | 335, 485, 510, 611, 827, 1003, 1128, 2222, 2357 |
| Hpy166II | GTNNAC | 6 cut(s) | 1418, 1775, 2185, 2201, 2303, 2402 |
| Hpy8I | GTNNAC | 6 cut(s) | 1418, 1775, 2185, 2201, 2303, 2402 |
| Hpy99I | CGWCG | 3 cut(s) | 86, 846, 2864 |
| HpyAV | CCTTC | 9 cut(s) | 393, 538, 543, 940, 1004, 1040, 1220, 2611, 2701 |
| HpyCH4IV | ACGT | 4 cut(s) | 132, 1790, 2305, 2862 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 37, 106, 115, 1905, 2663 |
| HpySE526I | ACGT | 4 cut(s) | 132, 1790, 2305, 2862 |
| Hsp92I | GRCGYC | 1 cut(s) | 123 |
| HspAI | GCGC | 1 cut(s) | 1908 |
| KflI | GGGWCCC | 1 cut(s) | 926 |
| Ksp22I | TGATCA | 2 cut(s) | 198, 310 |
| LmnI | GCTCC | 6 cut(s) | 111, 205, 562, 759, 1164, 2724 |
| Lsp1109I | GCAGC | 4 cut(s) | 25, 43, 1922, 2552 |
| LweI | GCATC | 7 cut(s) | 96, 113, 430, 452, 1162, 1209, 2653 |
| MaeII | ACGT | 4 cut(s) | 132, 1790, 2305, 2862 |
| MaeIII | GTNAC | 7 cut(s) | 607, 911, 1097, 1148, 1312, 1332, 1857 |
| MflI | RGATCY | 7 cut(s) | 1232, 1450, 1717, 1732, 2358, 2777, 2819 |
| MhlI | GDGCHC | 3 cut(s) | 1169, 2487, 2721 |
| MlyI | GAGTC | 6 cut(s) | 17, 268, 472, 1388, 1876, 2572 |
| MmeI | TCCRAC | 2 cut(s) | 1636, 2132 |
| Mph1103I | ATGCAT | 2 cut(s) | 445, 1224 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1050 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1425, 2208 |
| MspA1I | CMGCKG | 1 cut(s) | 2102 |
| MspI | CCGG | 2 cut(s) | 494, 2188 |
| MspR9I | CCNGG | 5 cut(s) | 494, 495, 636, 1572, 2196 |
| MssI | GTTTAAAC | 1 cut(s) | 2392 |
| Mva1269I | GAATGC | 2 cut(s) | 1050, 1913 |
| MvaI | CCWGG | 3 cut(s) | 636, 1572, 2196 |
| MvnI | CGCG | 2 cut(s) | 109, 1908 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 37, 106, 115, 1905, 2663 |
| NciI | CCSGG | 2 cut(s) | 494, 495 |
| NcoI | CCATGG | 2 cut(s) | 643, 1825 |
| NdeI | CATATG | 1 cut(s) | 2002 |
| NheI | GCTAGC | 1 cut(s) | 1271 |
| NlaIV | GGNNCC | 7 cut(s) | 251, 593, 927, 928, 1015, 1836, 2779 |
| NmuCI | GTSAC | 2 cut(s) | 607, 1332 |
| NsiI | ATGCAT | 2 cut(s) | 445, 1224 |
| NspI | RCATGY | 3 cut(s) | 809, 1250, 1340 |
| OliI | CACNNNNGTG | 1 cut(s) | 2208 |
| PaeI | GCATGC | 2 cut(s) | 809, 1250 |
| PagI | TCATGA | 1 cut(s) | 195 |
| PciI | ACATGT | 1 cut(s) | 1336 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 129, 1509, 1796 |
| PctI | GAATGC | 2 cut(s) | 1050, 1913 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1050 |
| PfeI | GAWTC | 9 cut(s) | 183, 218, 863, 1552, 1687, 2078, 2191, 2252, 2750 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 801 |
| PfoI | TCCNGGA | 1 cut(s) | 634 |
| PkrI | GCNGC | 5 cut(s) | 15, 33, 1068, 1912, 2542 |
| PleI | GAGTC | 6 cut(s) | 17, 267, 472, 1387, 1876, 2572 |
| PmeI | GTTTAAAC | 1 cut(s) | 2392 |
| PpsI | GAGTC | 6 cut(s) | 17, 267, 472, 1387, 1876, 2572 |
| Ppu21I | YACGTR | 1 cut(s) | 133 |
| PpuMI | RGGWCCY | 1 cut(s) | 926 |
| PscI | ACATGT | 1 cut(s) | 1336 |
| PshBI | ATTAAT | 1 cut(s) | 2636 |
| Psp124BI | GAGCTC | 3 cut(s) | 1169, 2487, 2721 |
| Psp5II | RGGWCCY | 1 cut(s) | 926 |
| Psp6I | CCWGG | 3 cut(s) | 634, 1570, 2194 |
| PspGI | CCWGG | 3 cut(s) | 634, 1570, 2194 |
| PspN4I | GGNNCC | 7 cut(s) | 251, 593, 927, 928, 1015, 1836, 2779 |
| PspPI | GGNCC | 6 cut(s) | 249, 647, 926, 1259, 2300, 2872 |
| PspPPI | RGGWCCY | 1 cut(s) | 926 |
| PsuI | RGATCY | 7 cut(s) | 1232, 1450, 1717, 1732, 2358, 2777, 2819 |
| PvuII | CAGCTG | 1 cut(s) | 2102 |
| RsaI | GTAC | 6 cut(s) | 884, 1024, 1823, 1957, 2186, 2276 |
| RsaNI | GTAC | 6 cut(s) | 883, 1023, 1822, 1956, 2185, 2275 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1425, 2208 |
| SacI | GAGCTC | 3 cut(s) | 1169, 2487, 2721 |
| SatI | GCNGC | 5 cut(s) | 14, 32, 1067, 1911, 2541 |
| Sau96I | GGNCC | 6 cut(s) | 249, 647, 926, 1259, 2300, 2872 |
| ScaI | AGTACT | 2 cut(s) | 884, 1957 |
| SchI | GAGTC | 6 cut(s) | 17, 268, 472, 1388, 1876, 2572 |
| ScrFI | CCNGG | 5 cut(s) | 494, 495, 636, 1572, 2196 |
| SduI | GDGCHC | 3 cut(s) | 1169, 2487, 2721 |
| SfaNI | GCATC | 7 cut(s) | 96, 113, 430, 452, 1162, 1209, 2653 |
| SfcI | CTRYAG | 1 cut(s) | 956 |
| SinI | GGWCC | 5 cut(s) | 249, 647, 926, 2300, 2872 |
| SmaI | CCCGGG | 1 cut(s) | 495 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1425, 2208 |
| SmlI | CTYRAG | 4 cut(s) | 318, 387, 1541, 2362 |
| SmoI | CTYRAG | 4 cut(s) | 318, 387, 1541, 2362 |
| SphI | GCATGC | 2 cut(s) | 809, 1250 |
| SsiI | CCGC | 4 cut(s) | 109, 746, 1066, 2875 |
| SstI | GAGCTC | 3 cut(s) | 1169, 2487, 2721 |
| StyD4I | CCNGG | 5 cut(s) | 492, 493, 634, 1570, 2194 |
| StyI | CCWWGG | 4 cut(s) | 643, 1003, 1825, 2405 |
| TaiI | ACGT | 4 cut(s) | 135, 1793, 2308, 2865 |
| TaqII | GACCGA | 1 cut(s) | 855 |
| TatI | WGTACW | 2 cut(s) | 882, 1955 |
| TauI | GCSGC | 1 cut(s) | 1069 |
| TfiI | GAWTC | 9 cut(s) | 183, 218, 863, 1552, 1687, 2078, 2191, 2252, 2750 |
| TscAI | CASTG | 8 cut(s) | 341, 507, 1024, 1182, 1261, 1749, 1758, 2535 |
| TseFI | GTSAC | 2 cut(s) | 607, 1332 |
| TseI | GCWGC | 4 cut(s) | 13, 31, 1910, 2540 |
| Tsp45I | GTSAC | 2 cut(s) | 607, 1332 |
| TspGWI | ACGGA | 3 cut(s) | 889, 1079, 2299 |
| TspMI | CCCGGG | 1 cut(s) | 493 |
| TspRI | CASTG | 8 cut(s) | 341, 507, 1024, 1182, 1261, 1749, 1758, 2535 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 801 |
| VpaK11BI | GGWCC | 5 cut(s) | 249, 647, 926, 2300, 2872 |
| VspI | ATTAAT | 1 cut(s) | 2636 |
| XapI | RAATTY | 7 cut(s) | 144, 995, 1349, 1747, 2064, 2570, 2832 |
| XbaI | TCTAGA | 1 cut(s) | 2473 |
| XceI | RCATGY | 3 cut(s) | 809, 1250, 1340 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2403, 2435 |
| XmaI | CCCGGG | 1 cut(s) | 493 |
| XmiI | GTMKAC | 1 cut(s) | 1417 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1050 |
| ZrmI | AGTACT | 2 cut(s) | 884, 1957 |
| Zsp2I | ATGCAT | 2 cut(s) | 445, 1224 |