Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003095

Physical Location & Seq

Genomic Coordinates Forward (+)

49014948 .. 49019951

Gene Structure 5004 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0384300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1668 bp

ATGGACGGGTCACCGGAAACGAATCGGGTTGCCGCCGCCTCATCGCCGGCCCAAGCCTCGTCTCCGGCTGTGCAAGAGTCGCCTTTCTCCTATTTCCTTAGCAATCTCACTCCTATCAATACAGTGAAGAGTGATAGTTATTCACAAAGATTAGTAGGAGCCTTCTTCCCAACGCCACCAGTTGTCTTTACATCTCCCCATATTGATCTGGAGCGCGAAACCAGTTTCTTGGAAAGGAATGATATAGTTGAAGCAGGTTATAAAGAATGTAATACAACTATAGTCCAGAACCCTAGTTTTGAGAAGGAGGTCCAGTTGTGCAGTGCATCAGGGTGTATCGATGAATATTTGGCTGACCCTGCGAAGGTAGACTGTACAAGTTCTGCTGATGTACAGAGCGGTATCAATGCCAGCAAAGAATCCAATACAGAAGTTCATGAGGTTATTGATGGTAGTACAAAGAGTGAACCCCTTACAACATTGAATCAAGCTGAAGTGGATCTGCCTTTACCTTCACTGACACAGATTGAAACCACAATCATTGAGAAGACTGATCAAAATAGTGTAGATCTTGTCACCCGAGCACAAAGCCGTGGGCAGAATACAGCTAAGGTGGTTAGTCAACACCACCGTGGTATACGTAGGCATCTCCAATTTGAGACTGCAGTAGCCCAGAAGAGTTCTAACTTTGGTAACCATCGAAGTCTTTGCAGTCTGACGCATGATACTGACAATTTAAGGTCAGAATCCAAACTAACAAACTTGAAGACTCTAGCTTCTTCTCATTTAGATAGCAAAGGCTCCAGCAGTTCGCAGGGTGTTAGCTGTGACACTTCACAATTGTCTTCCTGCCTCTGTGAGTCAGTTAGATCCAGCCAAATTGGTGGAAACTCTTCCACCTCAGCTCCTATTCGTTCTGGTATTGGTTTACATCTGAATAGCATTACTCGATCTACATCCATGAGCTCAGATGTATTGCCAAGCAGGAAAGCAACTGGTTGTCTGAGTACACCGGACCAGATGTTGGAGCATGACAACAGAAACAACATAGAACATGAGTCAAGTAGTAGCTTTATTTCAGTTGTACCTGGGCAAAATTATTCTTCTGTGGGCAATGATCAGCAAGAAAGTCAAACCGCTGCGCACACTACTTTCACTTTTTATTCTACTGATGGTGTGCCATACCTTCCATGTGATTCTATGCATCAGATACTGGTTGACCAGCACTCAGTTCCTTGTGAGGAGATGAATGCTTCACAGGATGCAAACAAGATCGAGGAATTAAACGAACTGAGCCAAAAAAGGAAAAGGAGAAGAGGTGCAGAGATAAGTGAGGGCTGCAAACGCTGCAACTGTAAGAAGTCTAAATGTTTGAAACTTTATTGTGAGTGCTTTGCAGCTGGAGTATTTTGTTTGGATTCATGTGCATGTGAAAACTGCTACAACAAGCCTGAGTTTGAGGACACTGTTTTTGATGCACGTCAGCAAATTGAATCCCGTAATCCGCTGGCATTTGCTCCCAGAGTTGTGAAGCATGAAATCAACTCTTCGCCTAACATTATGGAAGAAGCAGACTGGACGACCCCATCATCAGCTAGGCACAAGAGAGGTTGCAATTGCAAGAAGTCAAAGTGCCTGAAAAAATACTGTGAATGCTTCCAGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PMD

Protein Analysis

555

Amino Acids

60.83

Weight (kDa)

5.71

Isoelectric Point (pI)

64.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCR	PF03638	448 - 483	2.2e-11	Tesmin/TSO1-like CXC domain, cysteine-rich domain
TCR	PF03638	535 - 554	4.6e-06	Tesmin/TSO1-like CXC domain, cysteine-rich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003095)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25010
fragaria_vesca	FvH4_3g28611 FvH4_6g33711 FvH4_6g33711 FvH4_6g33711
malus_domestica	MD09G1191600.v1.1
prunus_persica	Prupe.3G047800_v2.0.a1 Prupe.4G252400_v2.0.a1
pyrus_communis	pycom09g10810
rosa_chinensis	RchiOBHm_Chr2g0143601 RchiOBHm_Chr5g0052481
rosa_laevigata	RLG00000020050 RLG00000034816
rosa_multiflora	Rmu_sc0002311.1_g000001 Rmu_sc0002412.1_g000002 Rmu_sc0006803.1_g000043
rosa_roxburghii	Rroxscaffold_1G00028360 Rroxscaffold_2G00101610
rosa_rugosa	Rorug02G0384100 Rorug02G0384100 Rorug02G0384200 Rorug02G0384300 Rorug02G0384300 Rorug02G0384400 Rorug02G0384400 Rorug05G0271600 Rorug05G0271700
rosa_samantha	Rh2AG436100 Rh2BG443700 Rh2CG422300 Rh2DG454100 Rh5AG344300 Rh5BG355400 Rh5CG380800 Rh5DG370600
rosa_wichuraiana	Rw2G035540 Rw5G032510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	261
Acc16I	TGCGCA	1 cut(s)	1143
Acc36I	ACCTGC	1 cut(s)	245
AccB7I	CCANNNNNTGG	1 cut(s)	1024
AccBSI	CCGCTC	1 cut(s)	399
AccI	GTMKAC	2 cut(s)	369, 637
AccII	CGCG	1 cut(s)	216
AciI	CCGC	5 cut(s)	33, 36, 399, 1137, 1505
AclWI	GGATC	2 cut(s)	507, 864
AcuI	CTGAAG	1 cut(s)	513
AfaI	GTAC	5 cut(s)	376, 393, 457, 1009, 1086
AfiI	CCNNNNNNNGG	2 cut(s)	364, 1024
AgsI	TTSAA	6 cut(s)	251, 484, 530, 766, 1375, 1493
AjiI	CACGTC	1 cut(s)	1481
AjnI	CCWGG	1 cut(s)	1087
AleI	CACNNNNGTG	1 cut(s)	630
AluBI	AGCT	9 cut(s)	491, 608, 776, 825, 905, 966, 1071, 1400, 1595
AluI	AGCT	9 cut(s)	491, 608, 776, 825, 905, 966, 1071, 1400, 1595
Alw21I	GWGCWC	2 cut(s)	586, 968
Alw26I	GTCTC	2 cut(s)	66, 653
AlwI	GGATC	2 cut(s)	507, 864
AlwNI	CAGNNNCTG	1 cut(s)	1213
Ama87I	CYCGRG	1 cut(s)	579
AoxI	GGCC	1 cut(s)	48
ApeKI	GCWGC	4 cut(s)	1139, 1338, 1347, 1397
ArsI	GACNNNNNNTTYG	2 cut(s)	1454, 1486
Asp700I	GAANNNNTTC	1 cut(s)	892
AspLEI	GCGC	2 cut(s)	216, 1144
AspS9I	GGNCC	3 cut(s)	49, 310, 1015
AsuHPI	GGTGA	2 cut(s)	3, 568
AvaI	CYCGRG	1 cut(s)	579
AvaII	GGWCC	2 cut(s)	310, 1015
BanII	GRGCYC	1 cut(s)	968
BbsI	GAAGAC	3 cut(s)	554, 773, 837
Bbv12I	GWGCWC	2 cut(s)	586, 968
BbvCI	CCTCAGC	1 cut(s)	901
BbvI	GCAGC	4 cut(s)	1126, 1325, 1334, 1409
BccI	CCATC	4 cut(s)	443, 705, 1166, 1594
BceAI	ACGGC	1 cut(s)	576
BcgI	CGANNNNNNTGC	2 cut(s)	690, 724
BciT130I	CCWGG	1 cut(s)	1089
BclI	TGATCA	2 cut(s)	553, 1117
BcoDI	GTCTC	2 cut(s)	66, 653
BfaI	CTAG	3 cut(s)	294, 773, 1596
BfmI	CTRYAG	2 cut(s)	279, 663
BfuAI	ACCTGC	1 cut(s)	245
BglII	AGATCT	1 cut(s)	568
BisI	GCNGC	6 cut(s)	33, 36, 1140, 1339, 1348, 1398
BlsI	GCNGC	6 cut(s)	34, 37, 1141, 1340, 1349, 1399
Bme1390I	CCNGG	1 cut(s)	1089
Bme18I	GGWCC	2 cut(s)	310, 1015
BmeT110I	CYCGRG	1 cut(s)	579
BmgBI	CACGTC	1 cut(s)	1481
BmgT120I	GGNCC	3 cut(s)	49, 310, 1015
BmiI	GGNNCC	2 cut(s)	160, 802
BmrFI	CCNGG	1 cut(s)	1089
BmsI	GCATC	5 cut(s)	335, 655, 1213, 1252, 1465
BpiI	GAAGAC	3 cut(s)	554, 773, 837
BpmI	CTGGAG	3 cut(s)	230, 787, 1422
Bpu10I	CCTNAGC	3 cut(s)	98, 609, 901
Bsa29I	ATCGAT	1 cut(s)	339
BsaAI	YACGTR	1 cut(s)	641
BsaBI	GATNNNNATC	1 cut(s)	955
BsaJI	CCNNGG	3 cut(s)	592, 631, 1088
BsaWI	WCCGGW	2 cut(s)	13, 1012
BsaXI	ACNNNNNCTCC	6 cut(s)	299, 329, 889, 919, 1303, 1333
Bsc4I	CCNNNNNNNGG	2 cut(s)	364, 1024
Bse118I	RCCGGY	1 cut(s)	46
Bse1I	ACTGG	6 cut(s)	179, 222, 313, 1000, 1218, 1580
Bse3DI	GCAATG	1 cut(s)	1120
Bse8I	GATNNNNATC	1 cut(s)	955
BseBI	CCWGG	1 cut(s)	1089
BseCI	ATCGAT	1 cut(s)	339
BseDI	CCNNGG	3 cut(s)	592, 631, 1088
BseGI	GGATG	2 cut(s)	956, 1267
BseJI	GATNNNNATC	1 cut(s)	955
BseLI	CCNNNNNNNGG	2 cut(s)	364, 1024
BseMI	GCAATG	1 cut(s)	1120
BseMII	CTCAG	6 cut(s)	915, 981, 995, 1242, 1283, 1443
BseNI	ACTGG	6 cut(s)	179, 222, 313, 1000, 1218, 1580
BseRI	GAGGAG	1 cut(s)	1256
BseXI	GCAGC	4 cut(s)	1126, 1325, 1334, 1409
BsgI	GTGCAG	2 cut(s)	340, 1341
Bsh1236I	CGCG	1 cut(s)	216
BshFI	GGCC	1 cut(s)	50
BshVI	ATCGAT	1 cut(s)	339
BsiHKAI	GWGCWC	2 cut(s)	586, 968
BsiHKCI	CYCGRG	1 cut(s)	579
BsiSI	CCGG	4 cut(s)	14, 47, 65, 1013
BslI	CCNNNNNNNGG	2 cut(s)	364, 1024
BsmAI	GTCTC	2 cut(s)	66, 653
BsmBI	CGTCTC	1 cut(s)	66
BsmI	GAATGC	2 cut(s)	1255, 1658
BsnI	GGCC	1 cut(s)	50
BsoBI	CYCGRG	1 cut(s)	579
Bsp1286I	GDGCHC	2 cut(s)	586, 968
Bsp1407I	TGTACA	2 cut(s)	374, 391
Bsp143I	GATC	8 cut(s)	205, 499, 553, 568, 869, 950, 1117, 1272
BspACI	CCGC	5 cut(s)	33, 36, 399, 1137, 1505
BspANI	GGCC	1 cut(s)	50
BspCNI	CTCAG	6 cut(s)	914, 980, 996, 1241, 1284, 1444
BspDI	ATCGAT	1 cut(s)	339
BspFNI	CGCG	1 cut(s)	216
BspHI	TCATGA	1 cut(s)	436
BspLI	GGNNCC	2 cut(s)	160, 802
BspMAI	CTGCAG	1 cut(s)	667
BspMI	ACCTGC	1 cut(s)	245
BspPI	GGATC	2 cut(s)	507, 864
BsrBI	CCGCTC	1 cut(s)	399
BsrDI	GCAATG	1 cut(s)	1120
BsrFI	RCCGGY	1 cut(s)	46
BsrGI	TGTACA	2 cut(s)	374, 391
BsrI	ACTGG	6 cut(s)	179, 222, 313, 1000, 1218, 1580
BssAI	RCCGGY	1 cut(s)	46
BssECI	CCNNGG	3 cut(s)	592, 631, 1088
BssMI	GATC	8 cut(s)	205, 499, 553, 568, 869, 950, 1117, 1272
BssNAI	GTATAC	1 cut(s)	638
Bst1107I	GTATAC	1 cut(s)	638
Bst2UI	CCWGG	1 cut(s)	1089
Bst4CI	ACNGT	6 cut(s)	124, 374, 632, 1355, 1468, 1649
Bst6I	CTCTTC	5 cut(s)	122, 671, 898, 1309, 1552
BstAPI	GCANNNNNTGC	1 cut(s)	1347
BstAUI	TGTACA	2 cut(s)	374, 391
BstBAI	YACGTR	1 cut(s)	641
BstC8I	GCNNGC	3 cut(s)	48, 412, 1509
BstDEI	CTNAG	8 cut(s)	98, 609, 901, 967, 1004, 1228, 1292, 1452
BstDSI	CCRYGG	2 cut(s)	592, 631
BstEII	GGTNACC	2 cut(s)	9, 692
BstF5I	GGATG	2 cut(s)	956, 1267
BstFNI	CGCG	1 cut(s)	216
BstHHI	GCGC	2 cut(s)	216, 1144
BstKTI	GATC	8 cut(s)	208, 502, 556, 571, 872, 953, 1120, 1275
BstMAI	GTCTC	2 cut(s)	66, 653
BstMBI	GATC	8 cut(s)	205, 499, 553, 568, 869, 950, 1117, 1272
BstMWI	GCNNNNNNNGC	4 cut(s)	79, 359, 1344, 1347
BstNI	CCWGG	1 cut(s)	1089
BstNSI	RCATGY	1 cut(s)	1431
BstPI	GGTNACC	2 cut(s)	9, 692
BstSCI	CCNGG	1 cut(s)	1087
BstSFI	CTRYAG	2 cut(s)	279, 663
BstSNI	TACGTA	1 cut(s)	641
BstUI	CGCG	1 cut(s)	216
BstV1I	GCAGC	4 cut(s)	1126, 1325, 1334, 1409
BstV2I	GAAGAC	3 cut(s)	554, 773, 837
BstX2I	RGATCY	3 cut(s)	499, 568, 869
BstXI	CCANNNNNNTGG	2 cut(s)	229, 884
BstYI	RGATCY	3 cut(s)	499, 568, 869
BstZ17I	GTATAC	1 cut(s)	638
Bsu15I	ATCGAT	1 cut(s)	339
BsuRI	GGCC	1 cut(s)	50
BsuTUI	ATCGAT	1 cut(s)	339
BtgI	CCRYGG	2 cut(s)	592, 631
BtgZI	GCGATG	1 cut(s)	27
BtrI	CACGTC	1 cut(s)	1481
BtsCI	GGATG	2 cut(s)	956, 1267
BtsI	GCAGTG	1 cut(s)	328
BtsIMutI	CAGTG	4 cut(s)	129, 328, 515, 1464
BveI	ACCTGC	1 cut(s)	245
Cac8I	GCNNGC	3 cut(s)	48, 412, 1509
CaiI	CAGNNNCTG	1 cut(s)	1213
CciI	TCATGA	1 cut(s)	436
CfoI	GCGC	2 cut(s)	216, 1144
Cfr10I	RCCGGY	1 cut(s)	46
Cfr13I	GGNCC	3 cut(s)	49, 310, 1015
ClaI	ATCGAT	1 cut(s)	339
CseI	GACGC	1 cut(s)	727
Csp6I	GTAC	5 cut(s)	375, 392, 456, 1008, 1085
CspCI	CAANNNNNGTGG	2 cut(s)	523, 558
CviAII	CATG	9 cut(s)	437, 722, 961, 1031, 1055, 1191, 1422, 1428, 1535
CviQI	GTAC	5 cut(s)	375, 392, 456, 1008, 1085
DdeI	CTNAG	8 cut(s)	98, 609, 901, 967, 1004, 1228, 1292, 1452
DpnI	GATC	8 cut(s)	207, 501, 555, 570, 871, 952, 1119, 1274
DpnII	GATC	8 cut(s)	205, 499, 553, 568, 869, 950, 1117, 1272
Eam1104I	CTCTTC	5 cut(s)	122, 671, 898, 1309, 1552
EarI	CTCTTC	5 cut(s)	122, 671, 898, 1309, 1552
Ecl136II	GAGCTC	1 cut(s)	966
Eco105I	TACGTA	1 cut(s)	641
Eco24I	GRGCYC	1 cut(s)	968
Eco47I	GGWCC	2 cut(s)	310, 1015
Eco53kI	GAGCTC	1 cut(s)	966
Eco57I	CTGAAG	1 cut(s)	513
Eco88I	CYCGRG	1 cut(s)	579
Eco91I	GGTNACC	2 cut(s)	9, 692
EcoICRI	GAGCTC	1 cut(s)	966
EcoO65I	GGTNACC	2 cut(s)	9, 692
EcoRII	CCWGG	1 cut(s)	1087
EcoT22I	ATGCAT	1 cut(s)	1206
EcoT38I	GRGCYC	1 cut(s)	968
Esp3I	CGTCTC	1 cut(s)	66
FaeI	CATG	9 cut(s)	440, 725, 964, 1034, 1058, 1194, 1425, 1431, 1538
FatI	CATG	9 cut(s)	436, 721, 960, 1030, 1054, 1190, 1421, 1427, 1534
FbaI	TGATCA	2 cut(s)	553, 1117
FblI	GTMKAC	2 cut(s)	369, 637
Fnu4HI	GCNGC	6 cut(s)	33, 36, 1140, 1339, 1348, 1398
FokI	GGATG	2 cut(s)	943, 1274
FriOI	GRGCYC	1 cut(s)	968
Fsp4HI	GCNGC	6 cut(s)	33, 36, 1140, 1339, 1348, 1398
FspBI	CTAG	3 cut(s)	294, 773, 1596
FspI	TGCGCA	1 cut(s)	1143
GlaI	GCGC	2 cut(s)	215, 1143
GluI	GCNGC	6 cut(s)	33, 36, 1140, 1339, 1348, 1398
GsuI	CTGGAG	3 cut(s)	230, 787, 1422
HaeIII	GGCC	1 cut(s)	50
HapII	CCGG	4 cut(s)	14, 47, 65, 1013
HgaI	GACGC	1 cut(s)	727
HhaI	GCGC	2 cut(s)	216, 1144
Hin1II	CATG	9 cut(s)	440, 725, 964, 1034, 1058, 1194, 1425, 1431, 1538
Hin6I	GCGC	2 cut(s)	214, 1142
HinP1I	GCGC	2 cut(s)	214, 1142
HincII	GTYRAC	2 cut(s)	623, 1219
HindII	GTYRAC	2 cut(s)	623, 1219
HpaII	CCGG	4 cut(s)	14, 47, 65, 1013
HphI	GGTGA	2 cut(s)	3, 568
Hpy166II	GTNNAC	7 cut(s)	370, 467, 623, 638, 929, 1010, 1219
Hpy188I	TCNGA	6 cut(s)	717, 745, 936, 970, 1005, 1209
Hpy188III	TCNNGA	4 cut(s)	209, 286, 437, 1660
Hpy8I	GTNNAC	7 cut(s)	370, 467, 623, 638, 929, 1010, 1219
HpyAV	CCTTC	5 cut(s)	172, 298, 358, 522, 1196
HpyCH4III	ACNGT	6 cut(s)	124, 374, 632, 1355, 1468, 1649
HpyCH4IV	ACGT	2 cut(s)	640, 1480
HpyF10VI	GCNNNNNNNGC	4 cut(s)	79, 359, 1344, 1347
HpyF3I	CTNAG	8 cut(s)	98, 609, 901, 967, 1004, 1228, 1292, 1452
HpySE526I	ACGT	2 cut(s)	640, 1480
Hsp92II	CATG	9 cut(s)	440, 725, 964, 1034, 1058, 1194, 1425, 1431, 1538
HspAI	GCGC	2 cut(s)	214, 1142
KroI	GCCGGC	1 cut(s)	46
KroNI	GCCGGC	1 cut(s)	48
Ksp22I	TGATCA	2 cut(s)	553, 1117
Kzo9I	GATC	8 cut(s)	205, 499, 553, 568, 869, 950, 1117, 1272
LmnI	GCTCC	6 cut(s)	158, 211, 806, 910, 1027, 1522
Lsp1109I	GCAGC	4 cut(s)	1126, 1325, 1334, 1409
LweI	GCATC	5 cut(s)	335, 655, 1213, 1252, 1465
MaeI	CTAG	3 cut(s)	294, 773, 1596
MaeII	ACGT	2 cut(s)	640, 1480
MaeIII	GTNAC	4 cut(s)	9, 574, 692, 827
MalI	GATC	8 cut(s)	207, 501, 555, 570, 871, 952, 1119, 1274
MbiI	CCGCTC	1 cut(s)	399
MboI	GATC	8 cut(s)	205, 499, 553, 568, 869, 950, 1117, 1272
MfeI	CAATTG	2 cut(s)	839, 1615
MflI	RGATCY	3 cut(s)	499, 568, 869
MhlI	GDGCHC	2 cut(s)	586, 968
MluCI	AATT	8 cut(s)	653, 733, 839, 879, 1096, 1280, 1488, 1615
MlyI	GAGTC	4 cut(s)	86, 763, 869, 1067
MmeI	TCCRAC	1 cut(s)	1005
Mph1103I	ATGCAT	1 cut(s)	1206
MroNI	GCCGGC	1 cut(s)	46
MroXI	GAANNNNTTC	1 cut(s)	892
MseI	TTAA	2 cut(s)	737, 1283
MslI	CAYNNNNRTG	3 cut(s)	331, 630, 1426
MspA1I	CMGCKG	3 cut(s)	1139, 1400, 1507
MspI	CCGG	4 cut(s)	14, 47, 65, 1013
MspR9I	CCNGG	1 cut(s)	1089
MunI	CAATTG	2 cut(s)	839, 1615
Mva1269I	GAATGC	2 cut(s)	1255, 1658
MvaI	CCWGG	1 cut(s)	1089
MvnI	CGCG	1 cut(s)	216
MwoI	GCNNNNNNNGC	4 cut(s)	79, 359, 1344, 1347
NaeI	GCCGGC	1 cut(s)	48
NdeII	GATC	8 cut(s)	205, 499, 553, 568, 869, 950, 1117, 1272
NgoMIV	GCCGGC	1 cut(s)	46
NlaIII	CATG	9 cut(s)	440, 725, 964, 1034, 1058, 1194, 1425, 1431, 1538
NlaIV	GGNNCC	2 cut(s)	160, 802
NmuCI	GTSAC	3 cut(s)	9, 574, 827
NsbI	TGCGCA	1 cut(s)	1143
NsiI	ATGCAT	1 cut(s)	1206
NspI	RCATGY	1 cut(s)	1431
OliI	CACNNNNGTG	1 cut(s)	630
PagI	TCATGA	1 cut(s)	436
PctI	GAATGC	2 cut(s)	1255, 1658
PdiI	GCCGGC	1 cut(s)	48
PdmI	GAANNNNTTC	1 cut(s)	892
PfeI	GAWTC	7 cut(s)	22, 419, 484, 746, 1196, 1418, 1493
PflMI	CCANNNNNTGG	1 cut(s)	1024
PkrI	GCNGC	6 cut(s)	34, 37, 1141, 1340, 1349, 1399
PleI	GAGTC	4 cut(s)	85, 763, 868, 1066
PpsI	GAGTC	4 cut(s)	85, 763, 868, 1066
Ppu21I	YACGTR	1 cut(s)	641
PsiI	TTATAA	1 cut(s)	261
Psp124BI	GAGCTC	1 cut(s)	968
Psp6I	CCWGG	1 cut(s)	1087
PspEI	GGTNACC	2 cut(s)	9, 692
PspGI	CCWGG	1 cut(s)	1087
PspN4I	GGNNCC	2 cut(s)	160, 802
PspPI	GGNCC	3 cut(s)	49, 310, 1015
PstI	CTGCAG	1 cut(s)	667
PstNI	CAGNNNCTG	1 cut(s)	1213
PsuI	RGATCY	3 cut(s)	499, 568, 869
PvuII	CAGCTG	1 cut(s)	1400
RsaI	GTAC	5 cut(s)	376, 393, 457, 1009, 1086
RsaNI	GTAC	5 cut(s)	375, 392, 456, 1008, 1085
RseI	CAYNNNNRTG	3 cut(s)	331, 630, 1426
SacI	GAGCTC	1 cut(s)	968
SaqAI	TTAA	2 cut(s)	737, 1283
SatI	GCNGC	6 cut(s)	33, 36, 1140, 1339, 1348, 1398
Sau3AI	GATC	8 cut(s)	205, 499, 553, 568, 869, 950, 1117, 1272
Sau96I	GGNCC	3 cut(s)	49, 310, 1015
SchI	GAGTC	4 cut(s)	86, 763, 869, 1067
ScrFI	CCNGG	1 cut(s)	1089
SduI	GDGCHC	2 cut(s)	586, 968
SfaNI	GCATC	5 cut(s)	335, 655, 1213, 1252, 1465
SfcI	CTRYAG	2 cut(s)	279, 663
SinI	GGWCC	2 cut(s)	310, 1015
SmiMI	CAYNNNNRTG	3 cut(s)	331, 630, 1426
SnaBI	TACGTA	1 cut(s)	641
Sse9I	AATT	8 cut(s)	653, 733, 839, 879, 1096, 1280, 1488, 1615
SsiI	CCGC	5 cut(s)	33, 36, 399, 1137, 1505
SspI	AATATT	1 cut(s)	347
SspMI	CTAG	3 cut(s)	294, 773, 1596
SstI	GAGCTC	1 cut(s)	968
StyD4I	CCNGG	1 cut(s)	1087
TaaI	ACNGT	6 cut(s)	124, 374, 632, 1355, 1468, 1649
TaiI	ACGT	2 cut(s)	643, 1483
TaqI	TCGA	4 cut(s)	339, 700, 949, 1275
TasI	AATT	8 cut(s)	653, 733, 839, 879, 1096, 1280, 1488, 1615
TatI	WGTACW	4 cut(s)	374, 391, 455, 1007
TauI	GCSGC	2 cut(s)	35, 38
TfiI	GAWTC	7 cut(s)	22, 419, 484, 746, 1196, 1418, 1493
Tru1I	TTAA	2 cut(s)	737, 1283
Tru9I	TTAA	2 cut(s)	737, 1283
TscAI	CASTG	4 cut(s)	129, 328, 522, 1471
TseFI	GTSAC	3 cut(s)	9, 574, 827
TseI	GCWGC	4 cut(s)	1139, 1338, 1347, 1397
Tsp45I	GTSAC	3 cut(s)	9, 574, 827
TspDTI	ATGAA	5 cut(s)	357, 425, 1262, 1410, 1551
TspRI	CASTG	4 cut(s)	129, 328, 522, 1471
Van91I	CCANNNNNTGG	1 cut(s)	1024
VpaK11BI	GGWCC	2 cut(s)	310, 1015
XceI	RCATGY	1 cut(s)	1431
XmiI	GTMKAC	2 cut(s)	369, 637
XmnI	GAANNNNTTC	1 cut(s)	892
XspI	CTAG	3 cut(s)	294, 773, 1596
Zsp2I	ATGCAT	1 cut(s)	1206

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.