Exosome complex
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G07750 AT3G07750 |
| fragaria_vesca | FvH4_6g40740 |
| malus_domestica | MD09G1125700.v1.1 MD17G1115700.v1.1 |
| prunus_persica | Prupe.3G198900_v2.0.a1 Prupe.3G198900_v2.0.a1 Prupe.6G340200_v2.0.a1 Prupe.6G340200_v2.0.a1 Prupe.6G340200_v2.0.a1 Prupe.6G340200_v2.0.a1 |
| pyrus_communis | pycom09g04920 pycom17g10690 |
| rosa_chinensis | RchiOBHm_Chr2g0156191 RchiOBHm_Chr4g0385201 |
| rosa_laevigata | RLG00000010249 RLG00000020894 |
| rosa_multiflora | Rmu_sc0003086.1_g000002 Rmu_sc0008734.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00093160 Rroxscaffold_5G00333100 |
| rosa_rugosa | Rorug02G0452100 Rorug02G0452200 Rorug02G0452300 Rorug02G0452300 Rorug02G0452400 |
| rosa_samantha | Rh2AG518900 Rh2BG530300 Rh2CG503900 Rh2DG539300 Rh4CG003700 |
| rosa_wichuraiana | Rw2G042740 Rw4G000580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 87 |
| AfaI | GTAC | 2 cut(s) | 5, 23 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 155 |
| AjnI | CCWGG | 1 cut(s) | 153 |
| AluBI | AGCT | 1 cut(s) | 146 |
| AluI | AGCT | 1 cut(s) | 146 |
| Alw21I | GWGCWC | 1 cut(s) | 148 |
| ApeKI | GCWGC | 1 cut(s) | 119 |
| BanII | GRGCYC | 1 cut(s) | 148 |
| BbsI | GAAGAC | 1 cut(s) | 54 |
| Bbv12I | GWGCWC | 1 cut(s) | 148 |
| BbvI | GCAGC | 1 cut(s) | 106 |
| BccI | CCATC | 1 cut(s) | 212 |
| BciT130I | CCWGG | 1 cut(s) | 155 |
| BfaI | CTAG | 2 cut(s) | 54, 244 |
| BisI | GCNGC | 1 cut(s) | 120 |
| BlsI | GCNGC | 1 cut(s) | 121 |
| BmcAI | AGTACT | 1 cut(s) | 23 |
| Bme1390I | CCNGG | 1 cut(s) | 155 |
| BmrFI | CCNGG | 1 cut(s) | 155 |
| BmrI | ACTGGG | 1 cut(s) | 168 |
| BmuI | ACTGGG | 1 cut(s) | 168 |
| BpiI | GAAGAC | 1 cut(s) | 54 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 8, 40 |
| BsaJI | CCNNGG | 1 cut(s) | 154 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 155 |
| Bse1I | ACTGG | 1 cut(s) | 174 |
| BseBI | CCWGG | 1 cut(s) | 155 |
| BseDI | CCNNGG | 1 cut(s) | 154 |
| BseGI | GGATG | 2 cut(s) | 26, 223 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 155 |
| BseNI | ACTGG | 1 cut(s) | 174 |
| BseRI | GAGGAG | 1 cut(s) | 53 |
| BseXI | GCAGC | 1 cut(s) | 106 |
| BsiHKAI | GWGCWC | 1 cut(s) | 148 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 155 |
| Bsp1286I | GDGCHC | 1 cut(s) | 148 |
| Bsp1407I | TGTACA | 1 cut(s) | 3 |
| BspACI | CCGC | 1 cut(s) | 87 |
| BsrGI | TGTACA | 1 cut(s) | 3 |
| BsrI | ACTGG | 1 cut(s) | 174 |
| BssECI | CCNNGG | 1 cut(s) | 154 |
| Bst2UI | CCWGG | 1 cut(s) | 155 |
| Bst4CI | ACNGT | 2 cut(s) | 110, 191 |
| BstAUI | TGTACA | 1 cut(s) | 3 |
| BstC8I | GCNNGC | 1 cut(s) | 241 |
| BstF5I | GGATG | 2 cut(s) | 26, 223 |
| BstNI | CCWGG | 1 cut(s) | 155 |
| BstSCI | CCNGG | 1 cut(s) | 153 |
| BstV1I | GCAGC | 1 cut(s) | 106 |
| BstV2I | GAAGAC | 1 cut(s) | 54 |
| BtsCI | GGATG | 2 cut(s) | 26, 223 |
| BtsIMutI | CAGTG | 1 cut(s) | 6 |
| Cac8I | GCNNGC | 1 cut(s) | 241 |
| Csp6I | GTAC | 2 cut(s) | 4, 22 |
| CviJI | RGCY | 2 cut(s) | 146, 186 |
| CviKI_1 | RGCY | 2 cut(s) | 146, 186 |
| CviQI | GTAC | 2 cut(s) | 4, 22 |
| Ecl136II | GAGCTC | 1 cut(s) | 146 |
| Eco24I | GRGCYC | 1 cut(s) | 148 |
| Eco53kI | GAGCTC | 1 cut(s) | 146 |
| EcoICRI | GAGCTC | 1 cut(s) | 146 |
| EcoRII | CCWGG | 1 cut(s) | 153 |
| EcoT38I | GRGCYC | 1 cut(s) | 148 |
| FaiI | YATR | 3 cut(s) | 180, 194, 231 |
| Fnu4HI | GCNGC | 1 cut(s) | 120 |
| FokI | GGATG | 2 cut(s) | 13, 230 |
| FriOI | GRGCYC | 1 cut(s) | 148 |
| Fsp4HI | GCNGC | 1 cut(s) | 120 |
| FspBI | CTAG | 2 cut(s) | 54, 244 |
| GluI | GCNGC | 1 cut(s) | 120 |
| HinfI | GANTC | 1 cut(s) | 50 |
| Hpy166II | GTNNAC | 1 cut(s) | 6 |
| Hpy8I | GTNNAC | 1 cut(s) | 6 |
| HpyAV | CCTTC | 1 cut(s) | 28 |
| HpyCH4III | ACNGT | 2 cut(s) | 110, 191 |
| HpyCH4V | TGCA | 1 cut(s) | 65 |
| LmnI | GCTCC | 2 cut(s) | 16, 151 |
| LpnPI | CCDG | 4 cut(s) | 140, 167, 187, 196 |
| Lsp1109I | GCAGC | 1 cut(s) | 106 |
| MaeI | CTAG | 2 cut(s) | 54, 244 |
| MaeIII | GTNAC | 2 cut(s) | 110, 128 |
| MboII | GAAGA | 1 cut(s) | 59 |
| MhlI | GDGCHC | 1 cut(s) | 148 |
| MlyI | GAGTC | 1 cut(s) | 44 |
| MmeI | TCCRAC | 3 cut(s) | 54, 162, 195 |
| MnlI | CCTC | 3 cut(s) | 31, 175, 216 |
| MspR9I | CCNGG | 1 cut(s) | 155 |
| MvaI | CCWGG | 1 cut(s) | 155 |
| NmuCI | GTSAC | 1 cut(s) | 128 |
| PkrI | GCNGC | 1 cut(s) | 121 |
| PleI | GAGTC | 1 cut(s) | 44 |
| PpsI | GAGTC | 1 cut(s) | 44 |
| Psp124BI | GAGCTC | 1 cut(s) | 148 |
| Psp6I | CCWGG | 1 cut(s) | 153 |
| PspGI | CCWGG | 1 cut(s) | 153 |
| RsaI | GTAC | 2 cut(s) | 5, 23 |
| RsaNI | GTAC | 2 cut(s) | 4, 22 |
| SacI | GAGCTC | 1 cut(s) | 148 |
| SatI | GCNGC | 1 cut(s) | 120 |
| ScaI | AGTACT | 1 cut(s) | 23 |
| SchI | GAGTC | 1 cut(s) | 44 |
| ScrFI | CCNGG | 1 cut(s) | 155 |
| SduI | GDGCHC | 1 cut(s) | 148 |
| SetI | ASST | 2 cut(s) | 148, 227 |
| SgeI | CNNG | 7 cut(s) | 43, 66, 74, 166, 167, 186, 223 |
| SsiI | CCGC | 1 cut(s) | 87 |
| SspI | AATATT | 1 cut(s) | 198 |
| SspMI | CTAG | 2 cut(s) | 54, 244 |
| SstI | GAGCTC | 1 cut(s) | 148 |
| StyD4I | CCNGG | 1 cut(s) | 153 |
| TaaI | ACNGT | 2 cut(s) | 110, 191 |
| TatI | WGTACW | 2 cut(s) | 3, 21 |
| TscAI | CASTG | 1 cut(s) | 13 |
| TseFI | GTSAC | 1 cut(s) | 128 |
| TseI | GCWGC | 1 cut(s) | 119 |
| Tsp45I | GTSAC | 1 cut(s) | 128 |
| TspGWI | ACGGA | 2 cut(s) | 29, 50 |
| TspRI | CASTG | 1 cut(s) | 13 |
| XspI | CTAG | 2 cut(s) | 54, 244 |
| ZrmI | AGTACT | 1 cut(s) | 23 |