Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003754

Physical Location & Seq

Genomic Coordinates Reverse (-)

61148336 .. 61155740

Gene Structure 7405 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0481100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2613 bp

ATGACACTGGAAGTTGCAGAGTTCCTCCGGCACAAGTTCTTGAAGTCCATTCAAGATGCAGAGTCTGAATTATCAGGTTTTGTGTACATCTCCCACTTCAAAGAAATCAAAGAAATCAAACGCTTCGTGGAAGAGATACAGATAATCCCGGAGATCAAAATCACTCTCGGCTCCGGCGACGACCTCTACCACAAGACCGTGTCTTTGCTCTACGAGCTCAACGACGCGTTGGCAGAATCCCGAGTATTGGCCAACGTGTGCAAGCAGCAAAATAAGAAGCTCTTTTTCTTGTTGCACCCCTTGTTGAACTACTCTATCCGAAAGATGAAGAAACGACTCAACCAAATGAAACGCAAGTTTGCGGCTTTGGTCGAAGAGGAGAAAATGTATTCCACACTTGTAATTTGTGATCAGACGAGTCTAGACGGTGAGCCGGGAACTGAAATGGATGATGACCGTACGAGTCAAATCGGCGGCGCAGAAACGAGCATAGTCGGTGCTGATGAGCAGGCGGAGAAGATTGAGGGCTTGCTGTGTGGCGGTGCTACGGCAATTGGGATAGTCGGCATTGCTGGCGTAGGTAAGACCACTCTAGTGCACCAGGTTTTGAATAGGCAGAGAGTGAGGGATGAGTTTTCTCCTATAATTTTGTTATGCTTATCGGACAAAGAAAAATATGAATTTACTAATAGCATCGGCATTAGCATTGTGAGACGCATTCTTGATAAGTTGGGGGCTGTAGCTAGTGGCAATGGTGCCATAGACAATCTCAATGACGCCATAGTGGAGGAGGAGGAGAGAGATATTTCTGGCCTCGGACTTGAGAGGCTCTTGGCAAGGCTTAACCGGCTTTTATCTGGTAAAAGATATTTGATTGTGTTGGATGATGTGTGGCACATTAGCGAATTTTATTCGGATTTAGGTTGTACCTTTCAGGATCGGTTGTCTTATGGATTGCCTAAGGGTAGTGGTGGTGCTGTTGTTGTCACCACTAGGATACCAGGAGTTGCTGAACACATGGTTGGCAGAAATAACTTGATTACCGTTGAGCCTTTGGACACAGAAAGCTGCTGGCGTATATTTATGGAGACTATCAAGGATAATAAGGAAGTTTTAAACATTTCAACTCATGAAACTTTGGACAAGATTAAAAATGAAATTAAGGACCAATGTTACGGTCTACCAGTGGCTGCTAAGGAGCTCGCAGGAATCATTCCCAAACGGATTCGTGAGATAGAGTCCAACCGCTTCTTGAAGGAGATGTACATTCCTGATGAATTGCTTCAGCCTGATTTGGATGTCGAACCTGCTGTCCATATACCAAAATTCCCAGTATTGGTGTTTATTGATATGAAAAATATGAACAATAAACAGCTTGGAGAAAAACTCCTTGACAAATTTCGCTATCATCTTAATAAAAAGCAGGTTTTTGCTGTTTTGGAAGAGAAGTCTGATACCAAGAAAAAAGTAAAGGCACATAACCCTGAGAGGGTGCTAAAGGATGTTTATGGCACTTTAGAAAAGCTTAAGCGTAAAGGATATGGTTTTGCTGATGAAATTCAAAAGACAATGACGGTTATAATTGTTGGTGGTGATTCTGTGGCTAACTGGATTTTGGGAGTTATCTGTGATCTAAAATTGCCGGAGTTACCCTCCATTGCTCCAATTCCGCTGCAAACCATTCCTCCTATTGGTGGTAGCATCTCAAGTTCCTTTGGATGGAGGAGCATTTCTCCTGATGATCCAGTGAAATTGTCCCTGCAGCTAGATGTACAATATGCGAAAAAAATGAAAACTGACAGCTGGCATATTCTCGTTTGGATGAAAACCAATAAAAGTTCTACAGCTAATCAACAAATACCTCATTCTTTGCATCTATGTCATCCTGTTCACGAACCGGATATGCAAAATGCGGATAATCTCAAATTGGTTGGAGGGTTTTGGAACTACTTCAGATTGGAAGTTGATGCTCTCCGACAATATGGAAATCGCTGCTTTCATCCTACTGAAAGGACATTATCATCAGTTGCAAATATAAAGGTTATGAAACAACTTGATCAGTGGGATAAACTTGATATTACTAGCGGCATCAGGTCAATCCTTTGTTTTAACTTGTCTAGACCGCAAATTGTGAAGCAAGATCGGAAAGAGAGATACCTGTTTCCGTCTTTCATAGATGATGGACATCTTCAAATTATTGGTTACAGAGAAGTTTTCTTTCCTCTGTTTCCTCTTAGTGAAGGTTCCATTCACCTTGGCCAGGTACGGGGAATTTGTTTCGAGTTTATTGATGGTGAAGAAGAGGTTGCGAACATGACAATTGATGGAACACCATGGGAGAATATCCCACTTGATGGTACTGGTATCACTGTGATTGAAATCACTCATCACTGTCAAGTCAACATTCTCGCCAATCCATATTGCGATTCCCCACCGAAAAGTATCCACGATCAGGTGGTGATGAATGATGCTTCTGAAAATGATGATGAGAACAATGCTAAAGATTACTCTGAACGACATAAGAAGTTTGGTGCTGCAAGCACTTTCAAACTTACCTGTGCTGATGAAGGACATGAAACCTATGGTGAAGCAAGCACTTCCAACGTCCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS

Protein Analysis

870

Amino Acids

98.17

Weight (kDa)

5.77

Isoelectric Point (pI)

39.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_16	PF13191	165 - 310	1.1e-06	AAA ATPase domain
NB-ARC	PF00931	170 - 368	1.2e-21	NB-ARC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003754)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32295 AT2G32295
fragaria_vesca	FvH4_6g43560 FvH4_6g43560 FvH4_6g43560 FvH4_6g43560 FvH4_6g43560 FvH4_6g43560 FvH4_6g43560 FvH4_6g43560 FvH4_6g43560 FvH4_6g43560 FvH4_6g43560
malus_domestica	MD09G1104800.v1.1 MD17G1092500.v1.1
prunus_persica	Prupe.3G220700_v2.0.a1 Prupe.3G220700_v2.0.a1 Prupe.3G220700_v2.0.a1 Prupe.3G220700_v2.0.a1 Prupe.3G220700_v2.0.a1
pyrus_communis	pycom09g02790 pycom17g09010
rosa_chinensis	RchiOBHm_Chr2g0160141
rosa_laevigata	RLG00000021199
rosa_multiflora	Rmu_sc0002023.1_g000002
rosa_roxburghii	Rroxscaffold_2G00090020
rosa_rugosa	Rorug02G0481100 Rorug02G0481200 Rorug02G0481300
rosa_samantha	Rh2AG547200 Rh2BG560500 Rh2CG530900 Rh2DG569200
rosa_wichuraiana	Rw2G045250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1580
Acc36I	ACCTGC	2 cut(s)	1315, 1414
AccB1I	GGYRCC	1 cut(s)	755
AccB7I	CCANNNNNTGG	1 cut(s)	2354
AccI	GTMKAC	1 cut(s)	1180
AccII	CGCG	1 cut(s)	227
AciI	CCGC	9 cut(s)	362, 474, 512, 540, 1246, 1670, 1913, 2085, 2123
AclWI	GGATC	2 cut(s)	945, 1736
AcoI	YGGCCR	2 cut(s)	249, 2257
AcsI	RAATTY	6 cut(s)	680, 905, 1325, 1397, 1557, 2271
AcuI	CTGAAG	2 cut(s)	1268, 1936
AcyI	GRCGYC	1 cut(s)	777
AfaI	GTAC	7 cut(s)	86, 460, 928, 1265, 1773, 2265, 2359
AflII	CTTAAG	1 cut(s)	1526
AflIII	ACRYGT	2 cut(s)	225, 255
AjnI	CCWGG	3 cut(s)	600, 1000, 2259
AjuI	GAANNNNNNNTTGG	2 cut(s)	1005, 1037
AleI	CACNNNNGTG	1 cut(s)	593
AloI	GAACNNNNNNTCC	2 cut(s)	1296, 1328
Alw21I	GWGCWC	3 cut(s)	219, 600, 1203
Alw26I	GTCTC	2 cut(s)	706, 1082
Alw44I	GTGCAC	1 cut(s)	596
AlwI	GGATC	2 cut(s)	945, 1736
AlwNI	CAGNNNCTG	2 cut(s)	65, 1190
Ama87I	CYCGRG	1 cut(s)	240
AoxI	GGCC	3 cut(s)	249, 811, 2257
ApaLI	GTGCAC	1 cut(s)	596
ApeKI	GCWGC	7 cut(s)	265, 1068, 1190, 1672, 1762, 1992, 2534
ApoI	RAATTY	6 cut(s)	680, 905, 1325, 1397, 1557, 2271
ArsI	GACNNNNNNTTYG	4 cut(s)	187, 219, 1296, 1328
Asp700I	GAANNNNTTC	2 cut(s)	1281, 1949
AspLEI	GCGC	1 cut(s)	479
AspS9I	GGNCC	1 cut(s)	1165
AsuC2I	CCSGG	2 cut(s)	149, 435
AsuHPI	GGTGA	7 cut(s)	440, 979, 1604, 2243, 2306, 2470, 2597
AvaI	CYCGRG	1 cut(s)	240
AvaII	GGWCC	1 cut(s)	1165
AxyI	CCTNAGG	1 cut(s)	960
BaeGI	GKGCMC	1 cut(s)	600
BalI	TGGCCA	2 cut(s)	251, 2259
BanI	GGYRCC	1 cut(s)	755
BanII	GRGCYC	2 cut(s)	219, 1203
BarI	GAAGNNNNNNTAC	2 cut(s)	1247, 1279
Bbv12I	GWGCWC	3 cut(s)	219, 600, 1203
BbvI	GCAGC	7 cut(s)	277, 1055, 1177, 1659, 1774, 1979, 2521
BccI	CCATC	5 cut(s)	1713, 2174, 2285, 2318, 2348
BceAI	ACGGC	1 cut(s)	564
BciT130I	CCWGG	3 cut(s)	602, 1002, 2261
BciVI	GTATCC	2 cut(s)	990, 2453
BclI	TGATCA	2 cut(s)	409, 2056
BcnI	CCSGG	2 cut(s)	149, 435
BcoDI	GTCTC	2 cut(s)	706, 1082
BfaI	CTAG	7 cut(s)	422, 593, 744, 993, 1766, 2082, 2118
BfmI	CTRYAG	3 cut(s)	738, 1760, 1842
BfrI	CTTAAG	1 cut(s)	1526
BfuAI	ACCTGC	2 cut(s)	1315, 1414
BfuI	GTATCC	2 cut(s)	990, 2453
Bme1390I	CCNGG	5 cut(s)	149, 435, 602, 1002, 2261
Bme18I	GGWCC	1 cut(s)	1165
BmeT110I	CYCGRG	1 cut(s)	240
BmgT120I	GGNCC	1 cut(s)	1165
BmiI	GGNNCC	3 cut(s)	172, 757, 2245
BmrFI	CCNGG	5 cut(s)	149, 435, 602, 1002, 2261
BmrI	ACTGGG	1 cut(s)	1325
BmsI	GCATC	7 cut(s)	46, 702, 1710, 1882, 1957, 2097, 2458
BmuI	ACTGGG	1 cut(s)	1325
BplI	GAGNNNNNCTC	6 cut(s)	1371, 1403, 1637, 1669, 1717, 1749
Bpu10I	CCTNAGC	1 cut(s)	1194
BpuEI	CTTGAG	2 cut(s)	842, 1690
BpuMI	CCSGG	2 cut(s)	149, 435
BsaBI	GATNNNNATC	3 cut(s)	158, 2184, 2378
BsaHI	GRCGYC	1 cut(s)	777
BsaJI	CCNNGG	3 cut(s)	814, 2254, 2333
BsaWI	WCCGGW	1 cut(s)	1897
BsaXI	ACNNNNNCTCC	4 cut(s)	371, 401, 1669, 1699
Bse118I	RCCGGY	1 cut(s)	846
Bse1I	ACTGG	6 cut(s)	12, 1184, 1331, 1613, 1745, 2365
Bse21I	CCTNAGG	1 cut(s)	960
Bse3DI	GCAATG	3 cut(s)	567, 757, 1656
Bse8I	GATNNNNATC	3 cut(s)	158, 2184, 2378
BseBI	CCWGG	3 cut(s)	602, 1002, 2261
BseDI	CCNNGG	3 cut(s)	814, 2254, 2333
BseGI	GGATG	9 cut(s)	454, 634, 889, 1303, 1507, 1724, 1827, 1882, 1999
BseJI	GATNNNNATC	3 cut(s)	158, 2184, 2378
BseMI	GCAATG	3 cut(s)	567, 757, 1656
BseMII	CTCAG	1 cut(s)	1476
BseNI	ACTGG	6 cut(s)	12, 1184, 1331, 1613, 1745, 2365
BseRI	GAGGAG	5 cut(s)	392, 803, 806, 809, 1738
BseSI	GKGCMC	1 cut(s)	600
BseXI	GCAGC	7 cut(s)	277, 1055, 1177, 1659, 1774, 1979, 2521
Bsh1236I	CGCG	1 cut(s)	227
BshFI	GGCC	3 cut(s)	251, 813, 2259
BshNI	GGYRCC	1 cut(s)	755
BsiHKAI	GWGCWC	3 cut(s)	219, 600, 1203
BsiHKCI	CYCGRG	1 cut(s)	240
BsiSI	CCGG	7 cut(s)	28, 149, 174, 434, 847, 1643, 1898
BsiWI	CGTACG	1 cut(s)	458
BslFI	GGGAC	1 cut(s)	1741
BsmAI	GTCTC	2 cut(s)	706, 1082
BsmBI	CGTCTC	1 cut(s)	706
BsmFI	GGGAC	1 cut(s)	1741
BsmI	GAATGC	1 cut(s)	717
BsnI	GGCC	3 cut(s)	251, 813, 2259
BsoBI	CYCGRG	1 cut(s)	240
Bsp1286I	GDGCHC	3 cut(s)	219, 600, 1203
Bsp1407I	TGTACA	3 cut(s)	84, 1263, 1771
Bsp143I	GATC	8 cut(s)	153, 409, 937, 1630, 1741, 2056, 2140, 2449
Bsp19I	CCATGG	1 cut(s)	2333
BspACI	CCGC	9 cut(s)	362, 474, 512, 540, 1246, 1670, 1913, 2085, 2123
BspANI	GGCC	3 cut(s)	251, 813, 2259
BspCNI	CTCAG	1 cut(s)	1477
BspFNI	CGCG	1 cut(s)	227
BspHI	TCATGA	1 cut(s)	1129
BspLI	GGNNCC	3 cut(s)	172, 757, 2245
BspMAI	CTGCAG	1 cut(s)	1764
BspMI	ACCTGC	2 cut(s)	1315, 1414
BspPI	GGATC	2 cut(s)	945, 1736
BspT107I	GGYRCC	1 cut(s)	755
BspTI	CTTAAG	1 cut(s)	1526
BsrDI	GCAATG	3 cut(s)	567, 757, 1656
BsrFI	RCCGGY	1 cut(s)	846
BsrGI	TGTACA	3 cut(s)	84, 1263, 1771
BsrI	ACTGG	6 cut(s)	12, 1184, 1331, 1613, 1745, 2365
BssAI	RCCGGY	1 cut(s)	846
BssECI	CCNNGG	3 cut(s)	814, 2254, 2333
BssMI	GATC	8 cut(s)	153, 409, 937, 1630, 1741, 2056, 2140, 2449
BssNI	GRCGYC	1 cut(s)	777
BssT1I	CCWWGG	2 cut(s)	2254, 2333
Bst2UI	CCWGG	3 cut(s)	602, 1002, 2261
Bst4CI	ACNGT	8 cut(s)	199, 428, 458, 1045, 1178, 1576, 2371, 2393
Bst6I	CTCTTC	4 cut(s)	126, 369, 1437, 2295
BstACI	GRCGYC	1 cut(s)	777
BstAFI	CTTAAG	1 cut(s)	1526
BstAUI	TGTACA	3 cut(s)	84, 1263, 1771
BstC8I	GCNNGC	9 cut(s)	263, 510, 530, 574, 1073, 1203, 1805, 2539, 2593
BstDEI	CTNAG	4 cut(s)	960, 1194, 1485, 2234
BstDSI	CCRYGG	1 cut(s)	2333
BstENI	CCTNNNNNAGG	1 cut(s)	2258
BstF5I	GGATG	9 cut(s)	454, 634, 889, 1303, 1507, 1724, 1827, 1882, 1999
BstFNI	CGCG	1 cut(s)	227
BstHHI	GCGC	1 cut(s)	479
BstKTI	GATC	8 cut(s)	156, 412, 940, 1633, 1744, 2059, 2143, 2452
BstMAI	GTCTC	2 cut(s)	706, 1082
BstMBI	GATC	8 cut(s)	153, 409, 937, 1630, 1741, 2056, 2140, 2449
BstMWI	GCNNNNNNNGC	3 cut(s)	214, 573, 847
BstNI	CCWGG	3 cut(s)	602, 1002, 2261
BstSCI	CCNGG	5 cut(s)	147, 433, 600, 1000, 2259
BstSFI	CTRYAG	3 cut(s)	738, 1760, 1842
BstSLI	GKGCMC	1 cut(s)	600
BstUI	CGCG	1 cut(s)	227
BstV1I	GCAGC	7 cut(s)	277, 1055, 1177, 1659, 1774, 1979, 2521
Bsu36I	CCTNAGG	1 cut(s)	960
BsuI	GTATCC	2 cut(s)	990, 2453
BsuRI	GGCC	3 cut(s)	251, 813, 2259
BtgI	CCRYGG	1 cut(s)	2333
BtsCI	GGATG	9 cut(s)	454, 634, 889, 1303, 1507, 1724, 1827, 1882, 1999
BtsIMutI	CAGTG	6 cut(s)	5, 1191, 1752, 2066, 2367, 2389
BveI	ACCTGC	2 cut(s)	1315, 1414
Cac8I	GCNNGC	9 cut(s)	263, 510, 530, 574, 1073, 1203, 1805, 2539, 2593
CaiI	CAGNNNCTG	2 cut(s)	65, 1190
CciI	TCATGA	1 cut(s)	1129
CfoI	GCGC	1 cut(s)	479
Cfr10I	RCCGGY	1 cut(s)	846
Cfr13I	GGNCC	1 cut(s)	1165
CseI	GACGC	3 cut(s)	233, 723, 785
CsiI	ACCWGGT	1 cut(s)	600
Csp6I	GTAC	7 cut(s)	85, 459, 927, 1264, 1772, 2264, 2358
CviAII	CATG	5 cut(s)	1018, 1130, 2314, 2334, 2573
CviQI	GTAC	7 cut(s)	85, 459, 927, 1264, 1772, 2264, 2358
DdeI	CTNAG	4 cut(s)	960, 1194, 1485, 2234
DpnI	GATC	8 cut(s)	155, 411, 939, 1632, 1743, 2058, 2142, 2451
DpnII	GATC	8 cut(s)	153, 409, 937, 1630, 1741, 2056, 2140, 2449
DraI	TTTAAA	1 cut(s)	1116
EaeI	YGGCCR	2 cut(s)	249, 2257
Eam1104I	CTCTTC	4 cut(s)	126, 369, 1437, 2295
EarI	CTCTTC	4 cut(s)	126, 369, 1437, 2295
EciI	GGCGGA	1 cut(s)	527
Ecl136II	GAGCTC	2 cut(s)	217, 1201
Eco130I	CCWWGG	2 cut(s)	2254, 2333
Eco24I	GRGCYC	2 cut(s)	219, 1203
Eco47I	GGWCC	1 cut(s)	1165
Eco53kI	GAGCTC	2 cut(s)	217, 1201
Eco57I	CTGAAG	2 cut(s)	1268, 1936
Eco81I	CCTNAGG	1 cut(s)	960
Eco88I	CYCGRG	1 cut(s)	240
EcoICRI	GAGCTC	2 cut(s)	217, 1201
EcoNI	CCTNNNNNAGG	1 cut(s)	2258
EcoRII	CCWGG	3 cut(s)	600, 1000, 2259
EcoT14I	CCWWGG	2 cut(s)	2254, 2333
EcoT38I	GRGCYC	2 cut(s)	219, 1203
ErhI	CCWWGG	2 cut(s)	2254, 2333
Esp3I	CGTCTC	1 cut(s)	706
FaeI	CATG	5 cut(s)	1021, 1133, 2317, 2337, 2576
FalI	AAGNNNNNCTT	2 cut(s)	266, 298
FaqI	GGGAC	1 cut(s)	1741
FatI	CATG	5 cut(s)	1017, 1129, 2313, 2333, 2572
FbaI	TGATCA	2 cut(s)	409, 2056
FblI	GTMKAC	1 cut(s)	1180
FokI	GGATG	9 cut(s)	461, 641, 896, 1310, 1514, 1731, 1834, 1869, 1986
FriOI	GRGCYC	2 cut(s)	219, 1203
FspBI	CTAG	7 cut(s)	422, 593, 744, 993, 1766, 2082, 2118
GlaI	GCGC	1 cut(s)	478
HaeIII	GGCC	3 cut(s)	251, 813, 2259
HapII	CCGG	7 cut(s)	28, 149, 174, 434, 847, 1643, 1898
HgaI	GACGC	3 cut(s)	233, 723, 785
HhaI	GCGC	1 cut(s)	479
Hin1I	GRCGYC	1 cut(s)	777
Hin1II	CATG	5 cut(s)	1021, 1133, 2317, 2337, 2576
Hin6I	GCGC	1 cut(s)	477
HinP1I	GCGC	1 cut(s)	477
HincII	GTYRAC	1 cut(s)	2401
HindII	GTYRAC	1 cut(s)	2401
HindIII	AAGCTT	1 cut(s)	1523
HpaII	CCGG	7 cut(s)	28, 149, 174, 434, 847, 1643, 1898
HphI	GGTGA	7 cut(s)	440, 979, 1604, 2243, 2306, 2470, 2597
Hpy166II	GTNNAC	5 cut(s)	85, 598, 1181, 1891, 2401
Hpy8I	GTNNAC	5 cut(s)	85, 598, 1181, 1891, 2401
Hpy99I	CGWCG	2 cut(s)	182, 227
HpyAV	CCTTC	3 cut(s)	1249, 2234, 2561
HpyCH4III	ACNGT	8 cut(s)	199, 428, 458, 1045, 1178, 1576, 2371, 2393
HpyCH4IV	ACGT	2 cut(s)	255, 2604
HpyF10VI	GCNNNNNNNGC	3 cut(s)	214, 573, 847
HpyF3I	CTNAG	4 cut(s)	960, 1194, 1485, 2234
HpySE526I	ACGT	2 cut(s)	255, 2604
Hsp92I	GRCGYC	1 cut(s)	777
Hsp92II	CATG	5 cut(s)	1021, 1133, 2317, 2337, 2576
HspAI	GCGC	1 cut(s)	477
Ksp22I	TGATCA	2 cut(s)	409, 2056
Kzo9I	GATC	8 cut(s)	153, 409, 937, 1630, 1741, 2056, 2140, 2449
LmnI	GCTCC	4 cut(s)	176, 1198, 1666, 1725
Lsp1109I	GCAGC	7 cut(s)	277, 1055, 1177, 1659, 1774, 1979, 2521
LweI	GCATC	7 cut(s)	46, 702, 1710, 1882, 1957, 2097, 2458
MabI	ACCWGGT	1 cut(s)	600
MaeI	CTAG	7 cut(s)	422, 593, 744, 993, 1766, 2082, 2118
MaeII	ACGT	2 cut(s)	255, 2604
MaeIII	GTNAC	4 cut(s)	985, 1172, 1647, 2201
MalI	GATC	8 cut(s)	155, 411, 939, 1632, 1743, 2058, 2142, 2451
MboI	GATC	8 cut(s)	153, 409, 937, 1630, 1741, 2056, 2140, 2449
MboII	GAAGA	8 cut(s)	143, 340, 386, 529, 1454, 2180, 2309, 2312
MfeI	CAATTG	2 cut(s)	552, 2319
MhlI	GDGCHC	3 cut(s)	219, 600, 1203
MlsI	TGGCCA	2 cut(s)	251, 2259
MluI	ACGCGT	1 cut(s)	225
MluNI	TGGCCA	2 cut(s)	251, 2259
MlyI	GAGTC	5 cut(s)	71, 330, 427, 472, 1247
MmeI	TCCRAC	4 cut(s)	861, 1266, 1912, 1999
Mox20I	TGGCCA	2 cut(s)	251, 2259
MroXI	GAANNNNTTC	2 cut(s)	1281, 1949
MscI	TGGCCA	2 cut(s)	251, 2259
MseI	TTAA	7 cut(s)	843, 1115, 1149, 1161, 1413, 1527, 2109
MslI	CAYNNNNRTG	1 cut(s)	593
Msp20I	TGGCCA	2 cut(s)	251, 2259
MspA1I	CMGCKG	2 cut(s)	1672, 1803
MspCI	CTTAAG	1 cut(s)	1526
MspI	CCGG	7 cut(s)	28, 149, 174, 434, 847, 1643, 1898
MspR9I	CCNGG	5 cut(s)	149, 435, 602, 1002, 2261
MunI	CAATTG	2 cut(s)	552, 2319
Mva1269I	GAATGC	1 cut(s)	717
MvaI	CCWGG	3 cut(s)	602, 1002, 2261
MvnI	CGCG	1 cut(s)	227
MwoI	GCNNNNNNNGC	3 cut(s)	214, 573, 847
NciI	CCSGG	2 cut(s)	149, 435
NcoI	CCATGG	1 cut(s)	2333
NdeII	GATC	8 cut(s)	153, 409, 937, 1630, 1741, 2056, 2140, 2449
NlaIII	CATG	5 cut(s)	1021, 1133, 2317, 2337, 2576
NlaIV	GGNNCC	3 cut(s)	172, 757, 2245
NmeAIII	GCCGAG	1 cut(s)	147
NmuCI	GTSAC	1 cut(s)	985
OliI	CACNNNNGTG	1 cut(s)	593
PagI	TCATGA	1 cut(s)	1129
PcsI	WCGNNNNNNNCGW	2 cut(s)	174, 219
PctI	GAATGC	1 cut(s)	717
PdmI	GAANNNNTTC	2 cut(s)	1281, 1949
PfeI	GAWTC	5 cut(s)	236, 1209, 1225, 1595, 2426
Pfl23II	CGTACG	1 cut(s)	458
PflFI	GACNNNGTC	1 cut(s)	199
PflMI	CCANNNNNTGG	1 cut(s)	2354
PfoI	TCCNGGA	1 cut(s)	147
PleI	GAGTC	5 cut(s)	70, 330, 426, 471, 1246
PpsI	GAGTC	5 cut(s)	70, 330, 426, 471, 1246
PsiI	TTATAA	1 cut(s)	1580
Psp124BI	GAGCTC	2 cut(s)	219, 1203
Psp6I	CCWGG	3 cut(s)	600, 1000, 2259
PspGI	CCWGG	3 cut(s)	600, 1000, 2259
PspLI	CGTACG	1 cut(s)	458
PspN4I	GGNNCC	3 cut(s)	172, 757, 2245
PspPI	GGNCC	1 cut(s)	1165
PstI	CTGCAG	1 cut(s)	1764
PstNI	CAGNNNCTG	2 cut(s)	65, 1190
PsyI	GACNNNGTC	1 cut(s)	199
PvuII	CAGCTG	1 cut(s)	1803
RsaI	GTAC	7 cut(s)	86, 460, 928, 1265, 1773, 2265, 2359
RsaNI	GTAC	7 cut(s)	85, 459, 927, 1264, 1772, 2264, 2358
RseI	CAYNNNNRTG	1 cut(s)	593
SacI	GAGCTC	2 cut(s)	219, 1203
SaqAI	TTAA	7 cut(s)	843, 1115, 1149, 1161, 1413, 1527, 2109
Sau3AI	GATC	8 cut(s)	153, 409, 937, 1630, 1741, 2056, 2140, 2449
Sau96I	GGNCC	1 cut(s)	1165
SchI	GAGTC	5 cut(s)	71, 330, 427, 472, 1247
ScrFI	CCNGG	5 cut(s)	149, 435, 602, 1002, 2261
SduI	GDGCHC	3 cut(s)	219, 600, 1203
SexAI	ACCWGGT	1 cut(s)	600
SfaNI	GCATC	7 cut(s)	46, 702, 1710, 1882, 1957, 2097, 2458
SfcI	CTRYAG	3 cut(s)	738, 1760, 1842
SinI	GGWCC	1 cut(s)	1165
SmiMI	CAYNNNNRTG	1 cut(s)	593
SmlI	CTYRAG	3 cut(s)	821, 1526, 1705
SmoI	CTYRAG	3 cut(s)	821, 1526, 1705
SsiI	CCGC	9 cut(s)	362, 474, 512, 540, 1246, 1670, 1913, 2085, 2123
SspMI	CTAG	7 cut(s)	422, 593, 744, 993, 1766, 2082, 2118
SstI	GAGCTC	2 cut(s)	219, 1203
StyD4I	CCNGG	5 cut(s)	147, 433, 600, 1000, 2259
StyI	CCWWGG	2 cut(s)	2254, 2333
TaaI	ACNGT	8 cut(s)	199, 428, 458, 1045, 1178, 1576, 2371, 2393
TaiI	ACGT	2 cut(s)	258, 2607
TaqI	TCGA	3 cut(s)	372, 1302, 2280
TatI	WGTACW	3 cut(s)	84, 1263, 1771
TauI	GCSGC	3 cut(s)	365, 477, 2088
TfiI	GAWTC	5 cut(s)	236, 1209, 1225, 1595, 2426
Tru1I	TTAA	7 cut(s)	843, 1115, 1149, 1161, 1413, 1527, 2109
Tru9I	TTAA	7 cut(s)	843, 1115, 1149, 1161, 1413, 1527, 2109
TscAI	CASTG	6 cut(s)	12, 1191, 1752, 2066, 2374, 2396
TseFI	GTSAC	1 cut(s)	985
TseI	GCWGC	7 cut(s)	265, 1068, 1190, 1672, 1762, 1992, 2534
Tsp45I	GTSAC	1 cut(s)	985
TspGWI	ACGGA	2 cut(s)	1237, 2154
TspRI	CASTG	6 cut(s)	12, 1191, 1752, 2066, 2374, 2396
Tth111I	GACNNNGTC	1 cut(s)	199
Van91I	CCANNNNNTGG	1 cut(s)	2354
Vha464I	CTTAAG	1 cut(s)	1526
VneI	GTGCAC	1 cut(s)	596
VpaK11BI	GGWCC	1 cut(s)	1165
XagI	CCTNNNNNAGG	1 cut(s)	2258
XapI	RAATTY	6 cut(s)	680, 905, 1325, 1397, 1557, 2271
XbaI	TCTAGA	2 cut(s)	421, 2117
XmiI	GTMKAC	1 cut(s)	1180
XmnI	GAANNNNTTC	2 cut(s)	1281, 1949
XspI	CTAG	7 cut(s)	422, 593, 744, 993, 1766, 2082, 2118

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.