Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0008213

Physical Location & Seq

Genomic Coordinates Forward (+)

66661762 .. 66663915

Gene Structure 2154 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0537100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGCATGGGAAGATCCCAACCTTGAAGATATCGTTGATTCAGATATTCCGTGCACACTTGTGGCAGAAGATTCATGAAAGTGTTGTGATGGATCTTTGTCAGGTTTTGGATCAGGAGTTGGATGCTTTGGAAATTGAGACTGTGCAGAAGGAAACCATACATCCCAGGAAGAGTTACAAAATGAACAACTCTTGTGCAGACATTCTCCTTTTTTCTGTTCATAAATGGCAAATGTCGAAACTTAGTCTTGTGGCTGAGCCGAAGGATGAGTATGATAAAAAAACAAGCAACAAGTACTGGATAGACGTGCAGCTCCGTTGGGGGGATTATGATTCTCATGATATTGAACGTTACACCCGGGCAAAGTTTATGGACTATACAACTGATAACATGTCTATCTATCCTTCTCCGACGGGAGTGATGATTGGTATTGATTTAGCCTATAATGTGCATTCTGCATTTGGTAACTGGTTTCCCGGATCAAAACCACTGATTCAACAGGCAATGAACAAGATCATGAAGTCAAATCCGGCTTTATATGTGTTGAGGGAGCGCATAAGGAAAGGATTGCAGTTGTATTCCTCTGAGCCTACAGAGCCATATTTGTCTTCCCAAAACTATGGGGAGCTCTTCAGCAATCAAATTAAATGGTTTGTTGACGATACAAATGTGTATCGTGTTACAATGCACAAGACTTTTGACGGAAATCTTGTTACAAAACCCATCAATGGTGCTATCTTCATGTTCAATCCAGGGACTGGGCAGCTGTTCTTGAAGGTTATCCACACAAGTGTGTCGGCAGGACAGAAGCGACTTGGGCAGTTGGCTAAATGGAAAACTGCAGAAGAAGTTGCTGCTCTTGTGCGTTCTCTACCTGTTGAAGAACAGCCAAAGCAAATTATTGTGACTCGTAAGGGAATGCTCGACCCATTGGAGGTTCATTTGCTGGATTTTCCCAACATAGTCATAAAAGGAAGTGAGCTACAGCTTCCTTTTCAGGTTTGCTTGAAAATTAAGAAGTTGAATGATCTGGTACTAAAGGCTACTGAGCCACAGATGGTTCTTTTTAATGTTTACGATGATTGGTTGAAGAGTGTTTCATCATACAGTGCATTCTCTCGGCTCATTCTGATTCTTCGGGCACTACATGTGAACAGAGACAAGGCAAGTATGTTGTTGAAGCCTGACCGAACAGTCATTAGTGAGCCACACCACATTTGGCCTTCTCTTTCTGATGAGCAATGGATGAAGGTTGAGCGTGCTCTAACAGATCTCATACTGTCAGACTATGCGAAAAAGAATAATGTGAGTACTTCAGCCCTCACACAGTCTGAAATTCGTGATATAATACTTGGAGCAGAGATTACTCCACCTTCTCAACAGAGGCAAGAGATAGCAGAGATTGAGAAACAGGCTAAAGGAGTTAGTCAGCTGACAGCAGTCACCACGAGGACCACAAACGTGCATGGAGATGAGCTTATTTCCACCACTACGAGTCAATATGAGCAAGCTGCATTCAGGTCCAAAACTGATTGGCGTGTGAGAGCAATATCAGCTACAAATCTACATCTTCGTGTCAACCATATTTATGTGAGTTCAGAAGATACAAAGGAAACAGGCTACACTTACATCATGCCAATGAACATTTTGAAAAAGTTTATCTGTGTTGCTGATCTGAGGACACAAGTTGCTGGTTACTTGTATGGTATAAGCCCACCTGACAACCCTCAGGTTAAGGAAATTCGCTGCATTGTGATGCCACCACAGCGGGGCACCCACCAGCAAGTTCATCTTCCATCAGCTCTTCCTGAGCATGATTTCCTCAATTATTTGGAACCTCTGGGATGGATGCACACCCAGCCAAATGAGCTACCTCAGCTTTCTCCTCAGGATCTCACCACTCATGCTAATATGTTGGAGAATGGCAAGCAATGGGATAGGGAGAAATGCATTATTATGACCTGCGCTTTTACTCCAGGTTCCTGCTCGTTAACTGCATATAAACTTACTCCTTCTGGTTATGAGTGGGGATGTTGTTCTAATAAGAACAGCGGAAGAAACAATAATCCACTAGATGGATACCTTCCAACTCATTATGAGAAGGTCCAGATGCTTCTCAGTGTATCGCTTCCTTGGTTTCTACATGGTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0005911 GO:0009506 GO:0012505 GO:0016020 GO:0019899 GO:0019900 GO:0019901 GO:0030054 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043424 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0055044 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Band_7

Protein Analysis

717

Amino Acids

81.92

Weight (kDa)

8.14

Isoelectric Point (pI)

42.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U6-snRNA_bdg	PF10596	1 - 39	2.4e-16	U6-snRNA interacting domain of PrP8
PRP8_domainIV	PF12134	199 - 428	1.3e-123	PRP8 domain IV core
JAB	PF01398	541 - 637	2.5e-11	JAB1/Mov34/MPN/PAD-1 ubiquitin protease
PROCT	PF08084	651 - 708	2e-13	PROCT (NUC072) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0008213)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62740
malus_domestica	MD09G1046900.v1.1 MD09G1047000.v1.1
prunus_persica	Prupe.3G271900_v2.0.a1 Prupe.3G271900_v2.0.a1 Prupe.3G271900_v2.0.a1
pyrus_communis	pycom111g03740 pycom111g03760
rosa_chinensis	RchiOBHm_Chr2g0169121 RchiOBHm_Chr2g0169141
rosa_laevigata	RLG00000021837
rosa_multiflora	Rmu_sc0006812.1_g000002
rosa_roxburghii	Rroxscaffold_2G00082400 Rroxscaffold_2G00082420
rosa_rugosa	Rorug02G0537100 Rorug02G0537500
rosa_samantha	Rh2AG609000 Rh2BG621900 Rh2CG590600 Rh2CG590800 Rh2DG632500
rosa_wichuraiana	Rw2G050500 Rw2G050520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1193
Acc36I	ACCTGC	1 cut(s)	1970
AccB1I	GGYRCC	1 cut(s)	1772
AccB7I	CCANNNNNTGG	2 cut(s)	758, 2075
AciI	CCGC	2 cut(s)	1768, 2052
AclI	AACGTT	1 cut(s)	349
AclWI	GGATC	5 cut(s)	7, 99, 117, 487, 1899
AcsI	RAATTY	2 cut(s)	1335, 1740
AcuI	CTGAAG	2 cut(s)	616, 1299
AfaI	GTAC	3 cut(s)	296, 1035, 1312
AfiI	CCNNNNNNNGG	6 cut(s)	322, 728, 758, 934, 1769, 2075
AflIII	ACRYGT	2 cut(s)	390, 1147
AjiI	CACGTC	1 cut(s)	307
AjnI	CCWGG	3 cut(s)	164, 751, 1975
AleI	CACNNNNGTG	4 cut(s)	58, 789, 791, 1460
Alw21I	GWGCWC	3 cut(s)	55, 630, 1264
Alw26I	GTCTC	2 cut(s)	131, 1152
Alw44I	GTGCAC	1 cut(s)	51
AlwI	GGATC	5 cut(s)	7, 99, 117, 487, 1899
AlwNI	CAGNNNCTG	1 cut(s)	758
Ama87I	CYCGRG	1 cut(s)	357
AoxI	GGCC	1 cut(s)	1220
ApaLI	GTGCAC	1 cut(s)	51
ApeKI	GCWGC	5 cut(s)	310, 763, 854, 1511, 1746
ApoI	RAATTY	2 cut(s)	1335, 1740
AspLEI	GCGC	2 cut(s)	555, 1967
AspS9I	GGNCC	3 cut(s)	1452, 1521, 2104
AsuC2I	CCSGG	3 cut(s)	358, 359, 477
AsuHPI	GGTGA	2 cut(s)	1435, 1888
AvaI	CYCGRG	1 cut(s)	357
AvaII	GGWCC	3 cut(s)	1452, 1521, 2104
AxyI	CCTNAGG	2 cut(s)	1728, 1887
BaeGI	GKGCMC	3 cut(s)	55, 1144, 1775
BaeI	ACNNNNGTAYC	2 cut(s)	654, 687
BanI	GGYRCC	1 cut(s)	1772
BanII	GRGCYC	1 cut(s)	630
BauI	CACGAG	1 cut(s)	1447
BbsI	GAAGAC	1 cut(s)	600
Bbv12I	GWGCWC	3 cut(s)	55, 630, 1264
BbvCI	CCTCAGC	1 cut(s)	1875
BbvI	GCAGC	5 cut(s)	322, 775, 841, 1498, 1733
BccI	CCATC	6 cut(s)	82, 731, 1051, 1804, 1839, 2069
BciT130I	CCWGG	3 cut(s)	166, 753, 1977
BciVI	GTATCC	1 cut(s)	2072
BcnI	CCSGG	3 cut(s)	358, 359, 477
BcoDI	GTCTC	2 cut(s)	131, 1152
BfaI	CTAG	1 cut(s)	2072
BfmI	CTRYAG	3 cut(s)	591, 840, 983
BfuAI	ACCTGC	1 cut(s)	1970
BfuI	GTATCC	1 cut(s)	2072
BglII	AGATCT	1 cut(s)	1270
BisI	GCNGC	5 cut(s)	311, 764, 855, 1512, 1747
BlpI	GCTNAGC	1 cut(s)	255
BlsI	GCNGC	5 cut(s)	312, 765, 856, 1513, 1748
BmcAI	AGTACT	2 cut(s)	296, 1312
Bme1390I	CCNGG	6 cut(s)	166, 358, 359, 477, 753, 1977
Bme18I	GGWCC	3 cut(s)	1452, 1521, 2104
BmeT110I	CYCGRG	1 cut(s)	357
BmgBI	CACGTC	1 cut(s)	307
BmgT120I	GGNCC	3 cut(s)	1452, 1521, 2104
BmiI	GGNNCC	4 cut(s)	1774, 1836, 1981, 2149
BmrFI	CCNGG	6 cut(s)	166, 358, 359, 477, 753, 1977
BmrI	ACTGGG	1 cut(s)	768
BmsI	GCATC	4 cut(s)	112, 1746, 1839, 2100
BmuI	ACTGGG	1 cut(s)	768
BoxI	GACNNNNGTC	1 cut(s)	1439
BpiI	GAAGAC	1 cut(s)	600
BpmI	CTGGAG	1 cut(s)	1959
Bpu10I	CCTNAGC	2 cut(s)	1809, 1875
Bpu1102I	GCTNAGC	1 cut(s)	255
BpuMI	CCSGG	3 cut(s)	358, 359, 477
BsaJI	CCNNGG	4 cut(s)	164, 357, 752, 2132
Bsc4I	CCNNNNNNNGG	6 cut(s)	322, 728, 758, 934, 1769, 2075
Bse1I	ACTGG	3 cut(s)	302, 473, 763
Bse21I	CCTNAGG	2 cut(s)	1728, 1887
Bse3DI	GCAATG	3 cut(s)	510, 1247, 1937
BseBI	CCWGG	3 cut(s)	166, 753, 1977
BseDI	CCNNGG	4 cut(s)	164, 357, 752, 2132
BseGI	GGATG	7 cut(s)	127, 160, 271, 1251, 1850, 1854, 2036
BseLI	CCNNNNNNNGG	6 cut(s)	322, 728, 758, 934, 1769, 2075
BseMI	GCAATG	3 cut(s)	510, 1247, 1937
BseMII	CTCAG	9 cut(s)	246, 576, 1038, 1667, 1742, 1800, 1889, 1901, 2131
BseNI	ACTGG	3 cut(s)	302, 473, 763
BseRI	GAGGAG	1 cut(s)	1875
BseSI	GKGCMC	3 cut(s)	55, 1144, 1775
BseXI	GCAGC	5 cut(s)	322, 775, 841, 1498, 1733
BseYI	CCCAGC	1 cut(s)	1857
BsgI	GTGCAG	3 cut(s)	164, 216, 329
BshFI	GGCC	1 cut(s)	1222
BshNI	GGYRCC	1 cut(s)	1772
BsiHKAI	GWGCWC	3 cut(s)	55, 630, 1264
BsiHKCI	CYCGRG	1 cut(s)	357
BsiSI	CCGG	3 cut(s)	358, 477, 530
BslFI	GGGAC	1 cut(s)	769
BslI	CCNNNNNNNGG	6 cut(s)	322, 728, 758, 934, 1769, 2075
BsmAI	GTCTC	2 cut(s)	131, 1152
BsmFI	GGGAC	1 cut(s)	769
BsmI	GAATGC	4 cut(s)	451, 924, 1112, 1514
BsnI	GGCC	1 cut(s)	1222
BsoBI	CYCGRG	1 cut(s)	357
Bsp1286I	GDGCHC	5 cut(s)	55, 630, 1144, 1264, 1775
Bsp143I	GATC	9 cut(s)	12, 91, 109, 479, 513, 1027, 1270, 1672, 1891
Bsp1720I	GCTNAGC	1 cut(s)	255
BspACI	CCGC	2 cut(s)	1768, 2052
BspANI	GGCC	1 cut(s)	1222
BspCNI	CTCAG	9 cut(s)	247, 577, 1039, 1668, 1741, 1801, 1888, 1900, 2130
BspHI	TCATGA	3 cut(s)	73, 337, 516
BspLI	GGNNCC	4 cut(s)	1774, 1836, 1981, 2149
BspMAI	CTGCAG	1 cut(s)	844
BspMI	ACCTGC	1 cut(s)	1970
BspPI	GGATC	5 cut(s)	7, 99, 117, 487, 1899
BspQI	GCTCTTC	2 cut(s)	635, 1809
BspT107I	GGYRCC	1 cut(s)	1772
BsrDI	GCAATG	3 cut(s)	510, 1247, 1937
BsrI	ACTGG	3 cut(s)	302, 473, 763
BssECI	CCNNGG	4 cut(s)	164, 357, 752, 2132
BssMI	GATC	9 cut(s)	12, 91, 109, 479, 513, 1027, 1270, 1672, 1891
BssSI	CACGAG	1 cut(s)	1447
BssT1I	CCWWGG	1 cut(s)	2132
Bst2BI	CACGAG	1 cut(s)	1447
Bst2UI	CCWGG	3 cut(s)	166, 753, 1977
Bst4CI	ACNGT	5 cut(s)	142, 1109, 1195, 1281, 1329
Bst6I	CTCTTC	4 cut(s)	164, 635, 1085, 1809
BstC8I	GCNNGC	3 cut(s)	1260, 1509, 1928
BstF5I	GGATG	7 cut(s)	127, 160, 271, 1251, 1850, 1854, 2036
BstHHI	GCGC	2 cut(s)	555, 1967
BstKTI	GATC	9 cut(s)	15, 94, 112, 482, 516, 1030, 1273, 1675, 1894
BstMAI	GTCTC	2 cut(s)	131, 1152
BstMBI	GATC	9 cut(s)	12, 91, 109, 479, 513, 1027, 1270, 1672, 1891
BstMWI	GCNNNNNNNGC	7 cut(s)	595, 817, 1553, 1765, 1858, 1867, 1876
BstNI	CCWGG	3 cut(s)	166, 753, 1977
BstNSI	RCATGY	2 cut(s)	394, 1151
BstPAI	GACNNNNGTC	1 cut(s)	1439
BstSCI	CCNGG	6 cut(s)	164, 356, 357, 475, 751, 1975
BstSFI	CTRYAG	3 cut(s)	591, 840, 983
BstSLI	GKGCMC	3 cut(s)	55, 1144, 1775
BstV1I	GCAGC	5 cut(s)	322, 775, 841, 1498, 1733
BstV2I	GAAGAC	1 cut(s)	600
BstX2I	RGATCY	4 cut(s)	12, 91, 1270, 1891
BstXI	CCANNNNNNTGG	1 cut(s)	620
BstYI	RGATCY	4 cut(s)	12, 91, 1270, 1891
Bsu36I	CCTNAGG	2 cut(s)	1728, 1887
BsuI	GTATCC	1 cut(s)	2072
BsuRI	GGCC	1 cut(s)	1222
BtrI	CACGTC	1 cut(s)	307
BtsCI	GGATG	7 cut(s)	127, 160, 271, 1251, 1850, 1854, 2036
BtsIMutI	CAGTG	3 cut(s)	488, 1114, 2125
BveI	ACCTGC	1 cut(s)	1970
Cac8I	GCNNGC	3 cut(s)	1260, 1509, 1928
CaiI	CAGNNNCTG	1 cut(s)	758
CciI	TCATGA	3 cut(s)	73, 337, 516
CfoI	GCGC	2 cut(s)	555, 1967
Cfr13I	GGNCC	3 cut(s)	1452, 1521, 2104
Cfr9I	CCCGGG	1 cut(s)	357
Csp6I	GTAC	3 cut(s)	295, 1034, 1311
CviQI	GTAC	3 cut(s)	295, 1034, 1311
DpnI	GATC	9 cut(s)	14, 93, 111, 481, 515, 1029, 1272, 1674, 1893
DpnII	GATC	9 cut(s)	12, 91, 109, 479, 513, 1027, 1270, 1672, 1891
DrdI	GACNNNNNNGTC	1 cut(s)	1193
DseDI	GACNNNNNNGTC	1 cut(s)	1193
Eam1104I	CTCTTC	4 cut(s)	164, 635, 1085, 1809
EarI	CTCTTC	4 cut(s)	164, 635, 1085, 1809
Ecl136II	GAGCTC	1 cut(s)	628
Eco130I	CCWWGG	1 cut(s)	2132
Eco24I	GRGCYC	1 cut(s)	630
Eco32I	GATATC	1 cut(s)	30
Eco47I	GGWCC	3 cut(s)	1452, 1521, 2104
Eco53kI	GAGCTC	1 cut(s)	628
Eco57I	CTGAAG	2 cut(s)	616, 1299
Eco81I	CCTNAGG	2 cut(s)	1728, 1887
Eco88I	CYCGRG	1 cut(s)	357
EcoICRI	GAGCTC	1 cut(s)	628
EcoRII	CCWGG	3 cut(s)	164, 751, 1975
EcoRV	GATATC	1 cut(s)	30
EcoT14I	CCWWGG	1 cut(s)	2132
EcoT22I	ATGCAT	2 cut(s)	6, 1952
EcoT38I	GRGCYC	1 cut(s)	630
ErhI	CCWWGG	1 cut(s)	2132
FalI	AAGNNNNNCTT	2 cut(s)	1776, 1808
FaqI	GGGAC	1 cut(s)	769
FauI	CCCGC	1 cut(s)	1761
Fnu4HI	GCNGC	5 cut(s)	311, 764, 855, 1512, 1747
FokI	GGATG	7 cut(s)	134, 147, 278, 1258, 1857, 1861, 2043
FriOI	GRGCYC	1 cut(s)	630
Fsp4HI	GCNGC	5 cut(s)	311, 764, 855, 1512, 1747
FspBI	CTAG	1 cut(s)	2072
GlaI	GCGC	2 cut(s)	554, 1966
GluI	GCNGC	5 cut(s)	311, 764, 855, 1512, 1747
GsaI	CCCAGC	1 cut(s)	1861
GsuI	CTGGAG	1 cut(s)	1959
HaeIII	GGCC	1 cut(s)	1222
HapII	CCGG	3 cut(s)	358, 477, 530
HhaI	GCGC	2 cut(s)	555, 1967
Hin6I	GCGC	2 cut(s)	553, 1965
HinP1I	GCGC	2 cut(s)	553, 1965
HincII	GTYRAC	3 cut(s)	658, 1579, 1992
HindII	GTYRAC	3 cut(s)	658, 1579, 1992
HinfI	GANTC	7 cut(s)	37, 70, 332, 493, 907, 1132, 1495
HpaI	GTTAAC	1 cut(s)	1992
HpaII	CCGG	3 cut(s)	358, 477, 530
HphI	GGTGA	2 cut(s)	1435, 1888
Hpy166II	GTNNAC	6 cut(s)	53, 658, 1075, 1153, 1579, 1992
Hpy188I	TCNGA	9 cut(s)	42, 411, 586, 1131, 1234, 1285, 1333, 1600, 1677
Hpy8I	GTNNAC	6 cut(s)	53, 658, 1075, 1153, 1579, 1992
Hpy99I	CGWCG	1 cut(s)	415
HpyCH4III	ACNGT	5 cut(s)	142, 1109, 1195, 1281, 1329
HpyCH4IV	ACGT	3 cut(s)	306, 349, 1461
HpyF10VI	GCNNNNNNNGC	7 cut(s)	595, 817, 1553, 1765, 1858, 1867, 1876
HpySE526I	ACGT	3 cut(s)	306, 349, 1461
HspAI	GCGC	2 cut(s)	553, 1965
KspAI	GTTAAC	1 cut(s)	1992
Kzo9I	GATC	9 cut(s)	12, 91, 109, 479, 513, 1027, 1270, 1672, 1891
LguI	GCTCTTC	2 cut(s)	635, 1809
LmnI	GCTCC	4 cut(s)	318, 550, 625, 1355
Lsp1109I	GCAGC	5 cut(s)	322, 775, 841, 1498, 1733
LweI	GCATC	4 cut(s)	112, 1746, 1839, 2100
MaeI	CTAG	1 cut(s)	2072
MaeII	ACGT	3 cut(s)	306, 349, 1461
MaeIII	GTNAC	8 cut(s)	173, 350, 464, 679, 712, 904, 1441, 1694
MalI	GATC	9 cut(s)	14, 93, 111, 481, 515, 1029, 1272, 1674, 1893
MboI	GATC	9 cut(s)	12, 91, 109, 479, 513, 1027, 1270, 1672, 1891
MflI	RGATCY	4 cut(s)	12, 91, 1270, 1891
MhlI	GDGCHC	5 cut(s)	55, 630, 1144, 1264, 1775
MluCI	AATT	7 cut(s)	132, 642, 897, 1011, 1335, 1740, 1825
MlyI	GAGTC	2 cut(s)	901, 1504
MmeI	TCCRAC	4 cut(s)	99, 434, 1896, 2111
Mph1103I	ATGCAT	2 cut(s)	6, 1952
MseI	TTAA	5 cut(s)	645, 1014, 1068, 1734, 1991
MspA1I	CMGCKG	4 cut(s)	766, 1432, 1768, 2052
MspI	CCGG	3 cut(s)	358, 477, 530
MspR9I	CCNGG	6 cut(s)	166, 358, 359, 477, 753, 1977
Mva1269I	GAATGC	4 cut(s)	451, 924, 1112, 1514
MvaI	CCWGG	3 cut(s)	166, 753, 1977
MwoI	GCNNNNNNNGC	7 cut(s)	595, 817, 1553, 1765, 1858, 1867, 1876
NciI	CCSGG	3 cut(s)	358, 359, 477
NdeII	GATC	9 cut(s)	12, 91, 109, 479, 513, 1027, 1270, 1672, 1891
NlaIV	GGNNCC	4 cut(s)	1774, 1836, 1981, 2149
NmeAIII	GCCGAG	1 cut(s)	1099
NmuCI	GTSAC	2 cut(s)	904, 1441
NsiI	ATGCAT	2 cut(s)	6, 1952
NspI	RCATGY	2 cut(s)	394, 1151
OliI	CACNNNNGTG	4 cut(s)	58, 789, 791, 1460
PagI	TCATGA	3 cut(s)	73, 337, 516
PciI	ACATGT	2 cut(s)	390, 1147
PciSI	GCTCTTC	2 cut(s)	635, 1809
PctI	GAATGC	4 cut(s)	451, 924, 1112, 1514
PfeI	GAWTC	5 cut(s)	37, 70, 332, 493, 1132
PflMI	CCANNNNNTGG	2 cut(s)	758, 2075
PfoI	TCCNGGA	1 cut(s)	475
PkrI	GCNGC	5 cut(s)	312, 765, 856, 1513, 1748
PleI	GAGTC	2 cut(s)	901, 1503
PpsI	GAGTC	2 cut(s)	901, 1503
PscI	ACATGT	2 cut(s)	390, 1147
PshAI	GACNNNNGTC	1 cut(s)	1439
Psp124BI	GAGCTC	1 cut(s)	630
Psp1406I	AACGTT	1 cut(s)	349
Psp6I	CCWGG	3 cut(s)	164, 751, 1975
PspFI	CCCAGC	1 cut(s)	1857
PspGI	CCWGG	3 cut(s)	164, 751, 1975
PspN4I	GGNNCC	4 cut(s)	1774, 1836, 1981, 2149
PspPI	GGNCC	3 cut(s)	1452, 1521, 2104
PstI	CTGCAG	1 cut(s)	844
PstNI	CAGNNNCTG	1 cut(s)	758
PsuI	RGATCY	4 cut(s)	12, 91, 1270, 1891
PvuII	CAGCTG	2 cut(s)	766, 1432
RsaI	GTAC	3 cut(s)	296, 1035, 1312
RsaNI	GTAC	3 cut(s)	295, 1034, 1311
SacI	GAGCTC	1 cut(s)	630
SapI	GCTCTTC	2 cut(s)	635, 1809
SaqAI	TTAA	5 cut(s)	645, 1014, 1068, 1734, 1991
SatI	GCNGC	5 cut(s)	311, 764, 855, 1512, 1747
Sau3AI	GATC	9 cut(s)	12, 91, 109, 479, 513, 1027, 1270, 1672, 1891
Sau96I	GGNCC	3 cut(s)	1452, 1521, 2104
ScaI	AGTACT	2 cut(s)	296, 1312
SchI	GAGTC	2 cut(s)	901, 1504
ScrFI	CCNGG	6 cut(s)	166, 358, 359, 477, 753, 1977
SduI	GDGCHC	5 cut(s)	55, 630, 1144, 1264, 1775
SfaNI	GCATC	4 cut(s)	112, 1746, 1839, 2100
SfcI	CTRYAG	3 cut(s)	591, 840, 983
SinI	GGWCC	3 cut(s)	1452, 1521, 2104
SmaI	CCCGGG	1 cut(s)	359
Sse9I	AATT	7 cut(s)	132, 642, 897, 1011, 1335, 1740, 1825
SsiI	CCGC	2 cut(s)	1768, 2052
SspMI	CTAG	1 cut(s)	2072
SstI	GAGCTC	1 cut(s)	630
StyD4I	CCNGG	6 cut(s)	164, 356, 357, 475, 751, 1975
StyI	CCWWGG	1 cut(s)	2132
TaaI	ACNGT	5 cut(s)	142, 1109, 1195, 1281, 1329
TaiI	ACGT	3 cut(s)	309, 352, 1464
TaqI	TCGA	2 cut(s)	236, 924
TaqII	GACCGA	1 cut(s)	1203
TasI	AATT	7 cut(s)	132, 642, 897, 1011, 1335, 1740, 1825
TatI	WGTACW	2 cut(s)	294, 1310
TfiI	GAWTC	5 cut(s)	37, 70, 332, 493, 1132
Tru1I	TTAA	5 cut(s)	645, 1014, 1068, 1734, 1991
Tru9I	TTAA	5 cut(s)	645, 1014, 1068, 1734, 1991
TscAI	CASTG	3 cut(s)	495, 1114, 2125
TseFI	GTSAC	2 cut(s)	904, 1441
TseI	GCWGC	5 cut(s)	310, 763, 854, 1511, 1746
Tsp45I	GTSAC	2 cut(s)	904, 1441
TspGWI	ACGGA	3 cut(s)	38, 305, 717
TspMI	CCCGGG	1 cut(s)	357
TspRI	CASTG	3 cut(s)	495, 1114, 2125
Van91I	CCANNNNNTGG	2 cut(s)	758, 2075
VneI	GTGCAC	1 cut(s)	51
VpaK11BI	GGWCC	3 cut(s)	1452, 1521, 2104
XapI	RAATTY	2 cut(s)	1335, 1740
XceI	RCATGY	2 cut(s)	394, 1151
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1215
XmaI	CCCGGG	1 cut(s)	357
XspI	CTAG	1 cut(s)	2072
ZrmI	AGTACT	2 cut(s)	296, 1312
Zsp2I	ATGCAT	2 cut(s)	6, 1952

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.