Rorug03G0079200

Belongs to the cyclin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0010288
Physical Location & Seq
Forward (+)
6201722 .. 6204758
3037 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0079200.1

Sequence Viewer

Length: 2364 bp
ATGTCCTCTTCAAAGTTCAAACCTTTAGCTATGAACTTGGCTAGAATGACCATAAACTTGTCAATTTTAGAAACCCAGTTGCCAAAATGCAAGAATCTCAAGCAGTTCAATCAAATACTATCTCAGATGATCCTCACTGGTTTCATTAGGGACACATATGCTGCAAGTAGAGTTCTCAAGTTCTCCACTGACTCTTCTTTCAGTGACATTGATTTGTCATTAAGAATTTTCAACCACATTGAGAACTCAAATGGGTTCATTTGGAACACTATGATGAAAGCTTATGTACAAAGAAACTGTCCCCAAAAGACTTTGAGTCTTTACAAATTGATGTTGGGTAAGAATGGGGATAGAGATAATTATACATACCCAATCCTAGTTCAAGCTTGTGCTATGAGAGCATCAGAGTTTGAAGGGAAACAGATGCATAGTCATATATTGAAGTTTGGGTTTGGTTCAGATGTGTATGTGCAGAACACATTGATCAACATGTACTCTGTTTGTGACAATATGAGGGATGCACGCAATGTGTTTGATGAAATGCCTGTGTTGGATTCGGTGGCGTGGAATTCGATATTGGCAGGGTATGTTAGGGTGGGGGATGTGGAGCAGGCAAAGTGTATATTTGAGCAGATGCCAGTGAGGAACACGATTGCTTCGAATTCTATGATTGTGTTGTTTGGTAAAAGAGGTTGTGTGACTGAGGCTCAGCATTTGTTTGATGAACTGCCTGAGAAGGATATGGTTTCGTGGAGCGCGCTGATTTCTTGTTTCGAGCAAAATGAGATGTATGAGGAGGCTTTGGATATGTTTGTGAAAATGGTTGCTAATGGAGTTATGGTGGATGAGGTTGTGGTGGTTAGTGTGCTTTCGGCATGTGCACATTTGTCAGCTGTCCACACAGGGAAGTTGATCCATGGCTTAGTTGTGAAGATTGGAATTGAAAGTTATGTTAATCTTCAAAATGCGTTTATTCACATGTATTCGAGTTGTGGGGAGATAATGATTGCGGAGAAACTGTTCAATGCAGCCTACAACCTGGATCAGATATCTTGGAACTCAATGATATCGGGGTACTTGAGATGTGGTTTAGTTGAAGCTGCTAAGACATTATTTGATTCCATGCCTGAGAAGGATGTAGTGTCTTGGAGTGCAATGATATCAGGCTATGCTCAGCATGACCGGTTTTCAGAAACTTTGGCATTGTTCCAGGAGATGCAGCTGTGTGGAATTAGGCCCGATGAGACCACTTTGGTGAGCGTCATCTCGGCTTGCACTCATTTGGCTGCCCTTGACCTGGGCCAATGGATTCATGCTTATATAAGGAAAAATAGCCTTAAAGTTAATGTCTTTCTTGGGACAACCCTTATTAACATGTACTTGAAATGTGGGTGTGTGGAAAATGCATTGGAGGTTTTCGAGGAGACAGCAGAAAAGGGAGTTTCTACTTGGAATGCTCTTATTCTTGGGTTGGCAATGAATGGGTTGGTGGAGAAGTCGCTTGAAATGTTTGCAAAGATGAAGACAAGGGGTGTGACACCTAATGAAATAACCTTTATGGGAGTTATTGGAGCTTGTCGTCACATGGGCTTGGTAGATGAGGGGCGTCGCCACTTCGATTCCATGATGCAGGAACACAAGATAGAACCCAATGTTAAGCATTACGGATGCATGGTTGATCTTCTTGGACGTGCTGGTATGCTCAAGGAGGCAGAGGACCTCATTGAAAGTATGCCTATGACACCAGATGTTGCTACTTGGGGTGCCTTACTGGGGGCTTGTAAGAAACATGGGGACAATGACAGGGGTGAGAGGATAGGAAGAAAGCTCATTGAGCTCGATCCTAACCATGATGGGTTCCATGTGTTGTTGTCCAATATATGTGCTTCGAAAGGTGATTGGAATGGTGTTCATGAGATTAGGGGAATAATGATGCAACATGGGGTGGTAAAGACCCCAGGTTGTAGCATGATCGAAGCAGATGGTGTAGTTCATGAATTTCTAGCAGGAGATAAGAAACACCCTCGAATGAAAGAGATTGAGGTTATGCTAGATGAAATGGCTCAGAAATTGAAGAGGGAAGGTTATGCACCAGATACAAATGAAGTATCCTTTGACATTGATGAAGAGGAAAAGGAAACTGTTCTTTTCAGACACAGTGAGAAACTGGCAATTGCCTTTGGGCTAATCGCTATCAGTCCACCATCACCAATACGAATAATAAAGAATTTGCGAATATGTAATGATTGTCACATGGCAGCAAAGTTCGTCTCGAAAGCTTTTGGTCGTGACATTGTGGTGAGGGATAAGCACCGCTTTCACCACTTTAAGCAGGGATCTTGTTCCTGCAATGACTATTGGTAG

Protein Analysis

787

Amino Acids

88.5

Weight (kDa)

6.1

Isoelectric Point (pI)

37.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 86 - 131 1.7e-07 PPR repeat family
PPR_2 PF13041 247 - 295 5.8e-06 PPR repeat family
PPR PF01535 249 - 279 2.1e-06 PPR repeat
PPR PF01535 350 - 379 1.2e-07 PPR repeat
PPR_2 PF13041 378 - 426 7.4e-10 PPR repeat family
PPR PF01535 381 - 411 8.8e-07 PPR repeat
PPR_2 PF13041 480 - 526 3.3e-10 PPR repeat family
PPR PF01535 482 - 512 1.2e-06 PPR repeat
E_motif PF20431 597 - 659 7.4e-14 E motif
Eplus_motif PF20430 664 - 691 5.1e-06 E+ motif
DYW_deaminase PF14432 695 - 787 2.7e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1763
AccII CGCG 1 cut(s) 758
AciI CCGC 2 cut(s) 1010, 2314
AclWI GGATC 5 cut(s) 124, 907, 1050, 1835, 2344
AcsI RAATTY 5 cut(s) 225, 568, 661, 1997, 2227
AcyI GRCGYC 1 cut(s) 1606
AfaI GTAC 4 cut(s) 288, 494, 1076, 1379
AfiI CCNNNNNNNGG 2 cut(s) 1297, 1773
AflIII ACRYGT 3 cut(s) 489, 978, 1374
AgeI ACCGGT 1 cut(s) 1182
AhdI GACNNNNNGTC 1 cut(s) 315
AjiI CACGTC 1 cut(s) 1691
AjnI CCWGG 4 cut(s) 1038, 1209, 1296, 1957
AjuI GAANNNNNNNTTGG 2 cut(s) 560, 592
AleI CACNNNNGTG 1 cut(s) 1253
AloI GAACNNNNNNTCC 2 cut(s) 1004, 1036
Alw21I GWGCWC 2 cut(s) 883, 1839
Alw26I GTCTC 3 cut(s) 1238, 1418, 2275
Alw44I GTGCAC 1 cut(s) 879
AlwI GGATC 5 cut(s) 124, 907, 1050, 1835, 2344
AoxI GGCC 2 cut(s) 1235, 1300
ApaLI GTGCAC 1 cut(s) 879
ApeKI GCWGC 6 cut(s) 161, 1028, 1100, 1219, 1286, 2258
ApoI RAATTY 5 cut(s) 225, 568, 661, 1997, 2227
ArsI GACNNNNNNTTYG 2 cut(s) 283, 315
AsiGI ACCGGT 1 cut(s) 1182
Asp700I GAANNNNTTC 2 cut(s) 1019, 2142
AspLEI GCGC 2 cut(s) 758, 760
AspS9I GGNCC 3 cut(s) 1236, 1300, 1717
AsuHPI GGTGA 6 cut(s) 1267, 1820, 1907, 2199, 2311, 2312
AsuII TTCGAA 2 cut(s) 659, 1889
AvaII GGWCC 1 cut(s) 1717
BaeGI GKGCMC 1 cut(s) 883
BanI GGYRCC 1 cut(s) 1763
BanII GRGCYC 1 cut(s) 1839
BbsI GAAGAC 1 cut(s) 1529
Bbv12I GWGCWC 2 cut(s) 883, 1839
BbvI GCAGC 6 cut(s) 148, 1040, 1087, 1231, 1273, 2270
BccI CCATC 3 cut(s) 1847, 1976, 2212
BciT130I CCWGG 4 cut(s) 1040, 1211, 1298, 1959
BciVI GTATCC 1 cut(s) 2119
BclI TGATCA 1 cut(s) 483
BcoDI GTCTC 3 cut(s) 1238, 1418, 2275
BfaI CTAG 4 cut(s) 42, 377, 2003, 2051
BfuI GTATCC 1 cut(s) 2119
BisI GCNGC 6 cut(s) 162, 1029, 1101, 1220, 1287, 2259
BlpI GCTNAGC 2 cut(s) 708, 1173
BlsI GCNGC 6 cut(s) 163, 1030, 1102, 1221, 1288, 2260
Bme1390I CCNGG 4 cut(s) 1040, 1211, 1298, 1959
Bme18I GGWCC 1 cut(s) 1717
BmeRI GACNNNNNGTC 1 cut(s) 315
BmgBI CACGTC 1 cut(s) 1691
BmgT120I GGNCC 3 cut(s) 1236, 1300, 1717
BmiI GGNNCC 2 cut(s) 1765, 1859
BmrFI CCNGG 4 cut(s) 1040, 1211, 1298, 1959
BmrI ACTGGG 2 cut(s) 70, 1781
BmsI GCATC 8 cut(s) 410, 414, 508, 624, 1206, 1617, 1658, 1923
BmuI ACTGGG 2 cut(s) 70, 1781
BpiI GAAGAC 1 cut(s) 1529
Bpu1102I GCTNAGC 2 cut(s) 708, 1173
Bpu14I TTCGAA 2 cut(s) 659, 1889
BpuEI CTTGAG 4 cut(s) 83, 161, 1099, 1688
BsaHI GRCGYC 1 cut(s) 1606
BsaI GGTCTC 1 cut(s) 1238
BsaJI CCNNGG 3 cut(s) 916, 1297, 1957
BsaWI WCCGGW 1 cut(s) 1182
BsaXI ACNNNNNCTCC 4 cut(s) 825, 855, 1004, 1034
Bsc4I CCNNNNNNNGG 2 cut(s) 1297, 1773
Bse118I RCCGGY 1 cut(s) 1182
Bse1I ACTGG 5 cut(s) 76, 142, 638, 1776, 2172
Bse3DI GCAATG 4 cut(s) 532, 1161, 1482, 2356
BseBI CCWGG 4 cut(s) 1040, 1211, 1298, 1959
BseDI CCNNGG 3 cut(s) 916, 1297, 1957
BseGI GGATG 5 cut(s) 523, 607, 850, 1141, 1673
BseLI CCNNNNNNNGG 2 cut(s) 1297, 1773
BseMI GCAATG 4 cut(s) 532, 1161, 1482, 2356
BseMII CTCAG 7 cut(s) 137, 693, 722, 723, 1119, 1187, 2078
BseNI ACTGG 5 cut(s) 76, 142, 638, 1776, 2172
BsePI GCGCGC 1 cut(s) 756
BseRI GAGGAG 2 cut(s) 809, 1436
BseSI GKGCMC 1 cut(s) 883
BseXI GCAGC 6 cut(s) 148, 1040, 1087, 1231, 1273, 2270
BsgI GTGCAG 1 cut(s) 491
Bsh1236I CGCG 1 cut(s) 758
BshFI GGCC 2 cut(s) 1237, 1302
BshNI GGYRCC 1 cut(s) 1763
BshTI ACCGGT 1 cut(s) 1182
BsiHKAI GWGCWC 2 cut(s) 883, 1839
BsiSI CCGG 1 cut(s) 1183
BslFI GGGAC 4 cut(s) 164, 285, 1372, 1808
BslI CCNNNNNNNGG 2 cut(s) 1297, 1773
BsmAI GTCTC 3 cut(s) 1238, 1418, 2275
BsmBI CGTCTC 1 cut(s) 2275
BsmFI GGGAC 4 cut(s) 164, 285, 1372, 1808
BsmI GAATGC 1 cut(s) 1459
BsnI GGCC 2 cut(s) 1237, 1302
Bso31I GGTCTC 1 cut(s) 1238
Bsp119I TTCGAA 2 cut(s) 659, 1889
Bsp1286I GDGCHC 2 cut(s) 883, 1839
Bsp1407I TGTACA 1 cut(s) 286
Bsp143I GATC 8 cut(s) 129, 483, 912, 1042, 1678, 1840, 1971, 2336
Bsp1720I GCTNAGC 2 cut(s) 708, 1173
Bsp19I CCATGG 1 cut(s) 916
BspACI CCGC 2 cut(s) 1010, 2314
BspANI GGCC 2 cut(s) 1237, 1302
BspCNI CTCAG 7 cut(s) 136, 694, 721, 724, 1120, 1186, 2077
BspFNI CGCG 1 cut(s) 758
BspHI TCATGA 2 cut(s) 1912, 1993
BspLI GGNNCC 2 cut(s) 1765, 1859
BspPI GGATC 5 cut(s) 124, 907, 1050, 1835, 2344
BspT104I TTCGAA 2 cut(s) 659, 1889
BspT107I GGYRCC 1 cut(s) 1763
BspTNI GGTCTC 1 cut(s) 1238
BsrDI GCAATG 4 cut(s) 532, 1161, 1482, 2356
BsrFI RCCGGY 1 cut(s) 1182
BsrGI TGTACA 1 cut(s) 286
BsrI ACTGG 5 cut(s) 76, 142, 638, 1776, 2172
BssAI RCCGGY 1 cut(s) 1182
BssECI CCNNGG 3 cut(s) 916, 1297, 1957
BssHII GCGCGC 1 cut(s) 756
BssMI GATC 8 cut(s) 129, 483, 912, 1042, 1678, 1840, 1971, 2336
BssNI GRCGYC 1 cut(s) 1606
BssT1I CCWWGG 1 cut(s) 916
Bst2UI CCWGG 4 cut(s) 1040, 1211, 1298, 1959
Bst4CI ACNGT 4 cut(s) 299, 1020, 2143, 2159
Bst6I CTCTTC 4 cut(s) 13, 199, 2069, 2121
BstACI GRCGYC 1 cut(s) 1606
BstAUI TGTACA 1 cut(s) 286
BstBI TTCGAA 2 cut(s) 659, 1889
BstC8I GCNNGC 4 cut(s) 523, 612, 758, 1273
BstDEI CTNAG 9 cut(s) 123, 702, 708, 732, 922, 1104, 1128, 1173, 2064
BstDSI CCRYGG 1 cut(s) 916
BstF5I GGATG 5 cut(s) 523, 607, 850, 1141, 1673
BstFNI CGCG 1 cut(s) 758
BstHHI GCGC 2 cut(s) 758, 760
BstKTI GATC 8 cut(s) 132, 486, 915, 1045, 1681, 1843, 1974, 2339
BstMAI GTCTC 3 cut(s) 1238, 1418, 2275
BstMBI GATC 8 cut(s) 129, 483, 912, 1042, 1678, 1840, 1971, 2336
BstMWI GCNNNNNNNGC 2 cut(s) 398, 1834
BstNI CCWGG 4 cut(s) 1040, 1211, 1298, 1959
BstNSI RCATGY 4 cut(s) 493, 879, 982, 1378
BstSCI CCNGG 4 cut(s) 1038, 1209, 1296, 1957
BstSLI GKGCMC 1 cut(s) 883
BstUI CGCG 1 cut(s) 758
BstV1I GCAGC 6 cut(s) 148, 1040, 1087, 1231, 1273, 2270
BstV2I GAAGAC 1 cut(s) 1529
BstX2I RGATCY 1 cut(s) 2336
BstYI RGATCY 1 cut(s) 2336
BsuI GTATCC 1 cut(s) 2119
BsuRI GGCC 2 cut(s) 1237, 1302
BtgI CCRYGG 1 cut(s) 916
BtrI CACGTC 1 cut(s) 1691
BtsCI GGATG 5 cut(s) 523, 607, 850, 1141, 1673
BtsIMutI CAGTG 5 cut(s) 135, 186, 208, 645, 2164
Cac8I GCNNGC 4 cut(s) 523, 612, 758, 1273
CciI TCATGA 2 cut(s) 1912, 1993
CfoI GCGC 2 cut(s) 758, 760
Cfr10I RCCGGY 1 cut(s) 1182
Cfr13I GGNCC 3 cut(s) 1236, 1300, 1717
CseI GACGC 2 cut(s) 1249, 1595
Csp6I GTAC 4 cut(s) 287, 493, 1075, 1378
CspAI ACCGGT 1 cut(s) 1182
CviQI GTAC 4 cut(s) 287, 493, 1075, 1378
DdeI CTNAG 9 cut(s) 123, 702, 708, 732, 922, 1104, 1128, 1173, 2064
DpnI GATC 8 cut(s) 131, 485, 914, 1044, 1680, 1842, 1973, 2338
DpnII GATC 8 cut(s) 129, 483, 912, 1042, 1678, 1840, 1971, 2336
DriI GACNNNNNGTC 1 cut(s) 315
Eam1104I CTCTTC 4 cut(s) 13, 199, 2069, 2121
Eam1105I GACNNNNNGTC 1 cut(s) 315
EarI CTCTTC 4 cut(s) 13, 199, 2069, 2121
Ecl136II GAGCTC 1 cut(s) 1837
Eco130I CCWWGG 1 cut(s) 916
Eco24I GRGCYC 1 cut(s) 1839
Eco31I GGTCTC 1 cut(s) 1238
Eco32I GATATC 3 cut(s) 1050, 1068, 1161
Eco47I GGWCC 1 cut(s) 1717
Eco53kI GAGCTC 1 cut(s) 1837
EcoICRI GAGCTC 1 cut(s) 1837
EcoO109I RGGNCCY 1 cut(s) 1717
EcoRI GAATTC 2 cut(s) 568, 661
EcoRII CCWGG 4 cut(s) 1038, 1209, 1296, 1957
EcoRV GATATC 3 cut(s) 1050, 1068, 1161
EcoT14I CCWWGG 1 cut(s) 916
EcoT22I ATGCAT 3 cut(s) 429, 1408, 1673
EcoT38I GRGCYC 1 cut(s) 1839
ErhI CCWWGG 1 cut(s) 916
Esp3I CGTCTC 1 cut(s) 2275
FalI AAGNNNNNCTT 2 cut(s) 2300, 2332
FaqI GGGAC 4 cut(s) 164, 285, 1372, 1808
FauNDI CATATG 1 cut(s) 157
FbaI TGATCA 1 cut(s) 483
Fnu4HI GCNGC 6 cut(s) 162, 1029, 1101, 1220, 1287, 2259
FokI GGATG 5 cut(s) 530, 614, 857, 1148, 1680
FriOI GRGCYC 1 cut(s) 1839
Fsp4HI GCNGC 6 cut(s) 162, 1029, 1101, 1220, 1287, 2259
FspBI CTAG 4 cut(s) 42, 377, 2003, 2051
GlaI GCGC 2 cut(s) 757, 759
GluI GCNGC 6 cut(s) 162, 1029, 1101, 1220, 1287, 2259
HaeIII GGCC 2 cut(s) 1237, 1302
HapII CCGG 1 cut(s) 1183
HgaI GACGC 2 cut(s) 1249, 1595
HhaI GCGC 2 cut(s) 758, 760
Hin1I GRCGYC 1 cut(s) 1606
Hin6I GCGC 2 cut(s) 756, 758
HinP1I GCGC 2 cut(s) 756, 758
HindIII AAGCTT 3 cut(s) 279, 384, 2277
HinfI GANTC 7 cut(s) 94, 191, 316, 554, 1118, 1309, 1619
HpaII CCGG 1 cut(s) 1183
HphI GGTGA 6 cut(s) 1267, 1820, 1907, 2199, 2311, 2312
Hpy166II GTNNAC 3 cut(s) 881, 898, 2201
Hpy188I TCNGA 7 cut(s) 126, 406, 460, 1047, 1192, 2067, 2153
Hpy188III TCNNGA 4 cut(s) 1913, 1994, 2272, 2288
Hpy8I GTNNAC 3 cut(s) 881, 898, 2201
Hpy99I CGWCG 1 cut(s) 1611
HpyAV CCTTC 4 cut(s) 407, 730, 1126, 2075
HpyCH4III ACNGT 4 cut(s) 299, 1020, 2143, 2159
HpyCH4IV ACGT 1 cut(s) 1690
HpyF10VI GCNNNNNNNGC 2 cut(s) 398, 1834
HpyF3I CTNAG 9 cut(s) 123, 702, 708, 732, 922, 1104, 1128, 1173, 2064
HpySE526I ACGT 1 cut(s) 1690
Hsp92I GRCGYC 1 cut(s) 1606
HspAI GCGC 2 cut(s) 756, 758
Ksp22I TGATCA 1 cut(s) 483
Kzo9I GATC 8 cut(s) 129, 483, 912, 1042, 1678, 1840, 1971, 2336
LmnI GCTCC 3 cut(s) 607, 753, 1571
Lsp1109I GCAGC 6 cut(s) 148, 1040, 1087, 1231, 1273, 2270
LweI GCATC 8 cut(s) 410, 414, 508, 624, 1206, 1617, 1658, 1923
MaeI CTAG 4 cut(s) 42, 377, 2003, 2051
MaeII ACGT 1 cut(s) 1690
MaeIII GTNAC 7 cut(s) 203, 503, 697, 1534, 1580, 2249, 2288
MalI GATC 8 cut(s) 131, 485, 914, 1044, 1680, 1842, 1973, 2338
MboI GATC 8 cut(s) 129, 483, 912, 1042, 1678, 1840, 1971, 2336
MboII GAAGA 8 cut(s) 186, 943, 950, 1534, 1673, 1833, 2086, 2138
MfeI CAATTG 1 cut(s) 2172
MflI RGATCY 1 cut(s) 2336
MhlI GDGCHC 2 cut(s) 883, 1839
MlyI GAGTC 2 cut(s) 185, 325
MmeI TCCRAC 1 cut(s) 531
Mph1103I ATGCAT 3 cut(s) 429, 1408, 1673
MroXI GAANNNNTTC 2 cut(s) 1019, 2142
MseI TTAA 7 cut(s) 221, 954, 1338, 1344, 1371, 1656, 2328
MslI CAYNNNNRTG 3 cut(s) 272, 1253, 2297
MspA1I CMGCKG 2 cut(s) 893, 1222
MspI CCGG 1 cut(s) 1183
MspR9I CCNGG 4 cut(s) 1040, 1211, 1298, 1959
MunI CAATTG 1 cut(s) 2172
Mva1269I GAATGC 1 cut(s) 1459
MvaI CCWGG 4 cut(s) 1040, 1211, 1298, 1959
MvnI CGCG 1 cut(s) 758
MwoI GCNNNNNNNGC 2 cut(s) 398, 1834
NcoI CCATGG 1 cut(s) 916
NdeI CATATG 1 cut(s) 157
NdeII GATC 8 cut(s) 129, 483, 912, 1042, 1678, 1840, 1971, 2336
NlaIV GGNNCC 2 cut(s) 1765, 1859
NmeAIII GCCGAG 1 cut(s) 1247
NmuCI GTSAC 7 cut(s) 203, 503, 697, 1534, 1580, 2249, 2288
NsiI ATGCAT 3 cut(s) 429, 1408, 1673
NspI RCATGY 4 cut(s) 493, 879, 982, 1378
NspV TTCGAA 2 cut(s) 659, 1889
OliI CACNNNNGTG 1 cut(s) 1253
PagI TCATGA 2 cut(s) 1912, 1993
PauI GCGCGC 1 cut(s) 756
PciI ACATGT 3 cut(s) 489, 978, 1374
PcsI WCGNNNNNNNCGW 1 cut(s) 656
PctI GAATGC 1 cut(s) 1459
PdmI GAANNNNTTC 2 cut(s) 1019, 2142
PfeI GAWTC 5 cut(s) 94, 554, 1118, 1309, 1619
PfoI TCCNGGA 1 cut(s) 1209
PinAI ACCGGT 1 cut(s) 1182
PkrI GCNGC 6 cut(s) 163, 1030, 1102, 1221, 1288, 2260
PleI GAGTC 2 cut(s) 185, 324
PpsI GAGTC 2 cut(s) 185, 324
PpuMI RGGWCCY 1 cut(s) 1717
PscI ACATGT 3 cut(s) 489, 978, 1374
Psp124BI GAGCTC 1 cut(s) 1839
Psp5II RGGWCCY 1 cut(s) 1717
Psp6I CCWGG 4 cut(s) 1038, 1209, 1296, 1957
PspGI CCWGG 4 cut(s) 1038, 1209, 1296, 1957
PspN4I GGNNCC 2 cut(s) 1765, 1859
PspPI GGNCC 3 cut(s) 1236, 1300, 1717
PspPPI RGGWCCY 1 cut(s) 1717
PsuI RGATCY 1 cut(s) 2336
PteI GCGCGC 1 cut(s) 756
PvuII CAGCTG 2 cut(s) 893, 1222
RsaI GTAC 4 cut(s) 288, 494, 1076, 1379
RsaNI GTAC 4 cut(s) 287, 493, 1075, 1378
RseI CAYNNNNRTG 3 cut(s) 272, 1253, 2297
SacI GAGCTC 1 cut(s) 1839
SaqAI TTAA 7 cut(s) 221, 954, 1338, 1344, 1371, 1656, 2328
SatI GCNGC 6 cut(s) 162, 1029, 1101, 1220, 1287, 2259
Sau3AI GATC 8 cut(s) 129, 483, 912, 1042, 1678, 1840, 1971, 2336
Sau96I GGNCC 3 cut(s) 1236, 1300, 1717
SchI GAGTC 2 cut(s) 185, 325
ScrFI CCNGG 4 cut(s) 1040, 1211, 1298, 1959
SduI GDGCHC 2 cut(s) 883, 1839
SfaNI GCATC 8 cut(s) 410, 414, 508, 624, 1206, 1617, 1658, 1923
SfuI TTCGAA 2 cut(s) 659, 1889
SinI GGWCC 1 cut(s) 1717
SmiMI CAYNNNNRTG 3 cut(s) 272, 1253, 2297
SmlI CTYRAG 4 cut(s) 98, 176, 1078, 1703
SmoI CTYRAG 4 cut(s) 98, 176, 1078, 1703
SsiI CCGC 2 cut(s) 1010, 2314
SspMI CTAG 4 cut(s) 42, 377, 2003, 2051
SstI GAGCTC 1 cut(s) 1839
StyD4I CCNGG 4 cut(s) 1038, 1209, 1296, 1957
StyI CCWWGG 1 cut(s) 916
TaaI ACNGT 4 cut(s) 299, 1020, 2143, 2159
TaiI ACGT 1 cut(s) 1693
TatI WGTACW 3 cut(s) 286, 492, 1377
TfiI GAWTC 5 cut(s) 94, 554, 1118, 1309, 1619
Tru1I TTAA 7 cut(s) 221, 954, 1338, 1344, 1371, 1656, 2328
Tru9I TTAA 7 cut(s) 221, 954, 1338, 1344, 1371, 1656, 2328
TscAI CASTG 5 cut(s) 142, 193, 208, 645, 2164
TseFI GTSAC 7 cut(s) 203, 503, 697, 1534, 1580, 2249, 2288
TseI GCWGC 6 cut(s) 161, 1028, 1100, 1219, 1286, 2258
Tsp45I GTSAC 7 cut(s) 203, 503, 697, 1534, 1580, 2249, 2288
TspGWI ACGGA 1 cut(s) 1680
TspRI CASTG 5 cut(s) 142, 193, 208, 645, 2164
VneI GTGCAC 1 cut(s) 879
VpaK11BI GGWCC 1 cut(s) 1717
XapI RAATTY 5 cut(s) 225, 568, 661, 1997, 2227
XceI RCATGY 4 cut(s) 493, 879, 982, 1378
XmnI GAANNNNTTC 2 cut(s) 1019, 2142
XspI CTAG 4 cut(s) 42, 377, 2003, 2051
Zsp2I ATGCAT 3 cut(s) 429, 1408, 1673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.