Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002726

Physical Location & Seq

Genomic Coordinates Reverse (-)

6755753 .. 6768666

Gene Structure 12914 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0086800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2421 bp

ATGGTGAGGTTCTTGTGGGTTTGCATTGTAGTAGCATTTTGTTTCAGCAAATGGGTTGATGGGTTTGTGCAGTACAGTCATAGAGGAGATCCCAAAACTGAAATTATAAATAACACACTGATGGTATCGATAACTCTCATTCGAGGAGCTGAGGCCAAAGGAGCAGTCTGCTTGGATGGAACATTGCCTGCTTATTATTTTAACCGTGGACATGGGTCAGGGGCAAATAGTTGGGTCGTTCACTTTCAGGGTGGAGGATGGTGTAGCAACATCTCAGAATGTGTTGCTCGCACAAAAACTCAGTTTGGATCATCAAGATATATGTTACCAGAGACGGGGTTCACTGGAATATTAAGCTTCAAAGCTGAAGAAAATCCAGATTTTTTCAACTGGAATAGAGTACTGATTCCCTCTTGTGATGGTGCTTCTTATTCTGGGGACAGTGAAAATAAGGAAGCACAACTACATTTTAGAGGACAGCGTATATGGTTGGCTTTCATGGAAGAGTTGATGTCATTGGGCATGCGCCATGCCAAGAGGGCTCTTATTTCCGGTTGCTCTGCTGGCGGTCTGACATCTATTTTGCACTGTGATAAGTTTCGTGGCTTATTTAAAAAAAGTACTAAAGTGAAGTGCCTGAGTGATGCTGGATTTTTCCCTGACGAGGTCGATATTTCTGGTGAACCTACATTCAGGAATTTTTTTAGTGGTGTAGTAAGCTTGCAGGGGGTGAAAAAAAATCTGCCACGCTTTTGTACTAGACACCTTGACCCTACTTCGTGCTTCTTCCCTCAGAACTTAATCTCCGGAATCAAAACACCACTATTTATACTCAATTCAGCATATGACATATATCAGTTTTACGCCATTTTAGTTCCAGCATCAACAGATCCCAATGGTTTGTGGGATAATTGCAAAATAAACCTTACAAATTGTTCTCCATCTCAGTTACAAATAATGAAAGGATACAGGAATCAAATGCTGAATCTACTAAAACCAATCTCCAAGTCTAAACAAAATGGGATGTCTGTAACTTCATGTTATGCGCATTGTCAAGCTCAGTATCAAGTGATGTGGCATGCTGATAACTCTACACTTATTGGAACCAAGACAATCTCACAATCTGTCGGAGATTGGTATTTTGATCGGGCAGAAGTTAAGGTGTATGATGAAGGCGTGATGGAACGAAGCGAGTCGAGTAAAGGTGTGCAGTGGTGCGCGGCAGCAGGGGCTGCAGTGGCAGCGAGTTGCAGGTGTGCTGCAGGGGCAGCAGGGGGTGCAGGGGCTACGGGCGCGAACCATGAAGGAGATCCCAAGACTGAAATCATTAATAACACTCTGATGGTATCACTAACCCTCATTCAAGGAGCTGATGTCAAAGGAGCAGTCTGCTTGGATGGAACATTACCTGCTTATTATTTTCATCGGGGACACGGGTCAGGGAAAAAGAGTTGGCTCGTTCACTTTCAGGGAGGAGGATGGTGTGGCAACGTCACGGACTGTGTTGCTCGCAAGAAAACGCAGCTCGGATCATCAAATTTCATGCTACCAGAGACAGGATTCACCGGAATACTAAGCTATAAAGCTGAAGAAAATCCAGATTTCTTCAACTGGAATAGAGTAATGCTTCCCTCTTGTGACGGTGCTTCTTTTTCTGGGGACAGTGAAAATAAGGAAGAACAACTGCAATTTAGAGGACATCGCATTTGGTTGGCTGCAATGGAAAAATTGATGTCATTGGGCATGCGCCACGCCAAGAAGGCTCTTATTTCTGGTTGCTCTGCTGGAGGTCTGACATCTATTTTGCACTGTGATAAGTTCCGGGGATTATTTCAAAGAAATACTAAAGTGAAGTGCCTCAGTGATGCTGGATTTTTCCTTGACTCGGTTGACATATCTGGTGCACCAACATTCAGGAATTTTTTCAGTAATGTTGTAAGCTTGCAGGGGGTGAAAGAAAATCTGCCACACTTTTGTACTAGTCGCCTCGATCCTACTTCGTGCTTCTTCCCTCAGAACTTACTCGCCGGCATTAAAACCCCGCTGTTTATACTTAACTCAGCATATGATTCTTTTCAGTTCCAATTCAGCTTAGTTCCAGCATCAGCTGATCCCAACGGCTTATGGAACAGTTGCAAATTAAACGTTACCAACTGTTCCCCAACTCAGTTGCATATTCTGCAAGGATTCAGGAGTCAAATGCTACAGGCACTAAAGCCATTCTCAAAGTCTAATCAAAATGGGATGTTTATAGATTCATGCTATGCACACTGTCAGTCTCAGTTTCAGCTAACGTGGTATGCTGCCAATTCTACAATCATTGGAAACAAGAGAATCTCGCAGTCCGTCGGAGATTGGTATTTCGACCGTGCAGAAGTTAAGGTCGTTGATAAAAGTTGCCACCATTTGGTTCCCCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04144 ko04152 ko04530 ko04972 map04144 map04152 map04530 map04972

Pfam Domains

Protein Families

Ras

Protein Analysis

806

Amino Acids

88.95

Weight (kDa)

8.67

Isoelectric Point (pI)

37.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAE	PF03283	38 - 390	6.4e-148	Pectinacetylesterase
PAE	PF03283	445 - 800	3.8e-153	Pectinacetylesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002726)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46060 AT3G46060 AT3G46060 AT3G53610 AT3G53610 AT3G53610 AT5G59840
fragaria_vesca	FvH4_6g14360 FvH4_6g14360 FvH4_7g21670 FvH4_7g21670 FvH4_7g21670
malus_domestica	MD04G1120500.v1.1 MD12G1137800.v1.1
prunus_persica	Prupe.2G230200_v2.0.a1 Prupe.2G230200_v2.0.a1 Prupe.6G249800_v2.0.a1 Prupe.6G249800_v2.0.a1 Prupe.6G249800_v2.0.a1
pyrus_communis	pycom01g14960 pycom04g10960 pycom07g18160 pycom12g13170
rosa_chinensis	RchiOBHm_Chr1g0365911 RchiOBHm_Chr3g0467421
rosa_multiflora	Rmu_sc0012351.1_g000013
rosa_roxburghii	Rroxscaffold_4G00290740 Rroxscaffold_6G00413690
rosa_rugosa	Rorug01G0325500 Rorug01G0325600 Rorug03G0086800
rosa_samantha	Rh1AG334400 Rh1CG311800 Rh1DG327500 Rh3BG156900 Rh3CG156800 Rh3DG157700
rosa_wichuraiana	Rw1G029680 Rw3G012840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	107
AarI	CACCTGC	1 cut(s)	1242
Acc16I	TGCGCA	1 cut(s)	1047
Acc36I	ACCTGC	2 cut(s)	1242, 1417
AccB7I	CCANNNNNTGG	1 cut(s)	2407
AccII	CGCG	2 cut(s)	1220, 1295
AccIII	TCCGGA	1 cut(s)	806
AciI	CCGC	3 cut(s)	567, 1220, 2042
AclI	AACGTT	1 cut(s)	2145
AclWI	GGATC	7 cut(s)	83, 316, 884, 1304, 1537, 1985, 2105
AcsI	RAATTY	3 cut(s)	697, 1537, 1918
AcuI	CTGAAG	2 cut(s)	387, 1608
AfaI	GTAC	5 cut(s)	74, 402, 622, 757, 1978
AfiI	CCNNNNNNNGG	5 cut(s)	335, 664, 1556, 1885, 2407
AgsI	TTSAA	5 cut(s)	361, 388, 1364, 1609, 1835
AhlI	ACTAGT	1 cut(s)	1979
AloI	GAACNNNNNNTCC	2 cut(s)	788, 820
Alw21I	GWGCWC	1 cut(s)	1906
Alw26I	GTCTC	3 cut(s)	326, 1547, 2283
Alw44I	GTGCAC	1 cut(s)	1902
AlwI	GGATC	7 cut(s)	83, 316, 884, 1304, 1537, 1985, 2105
AlwNI	CAGNNNCTG	1 cut(s)	1232
Aor13HI	TCCGGA	1 cut(s)	806
AoxI	GGCC	1 cut(s)	153
ApaLI	GTGCAC	1 cut(s)	1902
ApeKI	GCWGC	8 cut(s)	1223, 1232, 1241, 1259, 1268, 1522, 1715, 2303
ApoI	RAATTY	3 cut(s)	697, 1537, 1918
AseI	ATTAAT	1 cut(s)	1329
Asp700I	GAANNNNTTC	1 cut(s)	1922
AspLEI	GCGC	5 cut(s)	528, 1048, 1220, 1295, 1749
AsuC2I	CCSGG	1 cut(s)	1823
AsuHPI	GGTGA	5 cut(s)	16, 692, 742, 1555, 1963
BaeGI	GKGCMC	1 cut(s)	1906
BanII	GRGCYC	1 cut(s)	544
BarI	GAAGNNNNNNTAC	2 cut(s)	447, 479
Bbv12I	GWGCWC	1 cut(s)	1906
BbvCI	CCTCAGC	1 cut(s)	150
BbvI	GCAGC	8 cut(s)	1219, 1235, 1246, 1253, 1280, 1534, 1702, 2290
BceAI	ACGGC	1 cut(s)	2134
BciVI	GTATCC	1 cut(s)	959
BcnI	CCSGG	1 cut(s)	1823
BcoDI	GTCTC	3 cut(s)	326, 1547, 2283
BcuI	ACTAGT	1 cut(s)	1979
BfaI	CTAG	2 cut(s)	759, 1980
BfmI	CTRYAG	3 cut(s)	1233, 1260, 2204
BfuAI	ACCTGC	2 cut(s)	1242, 1417
BfuI	GTATCC	1 cut(s)	959
BglI	GCCNNNNNGGC	2 cut(s)	539, 1760
BisI	GCNGC	9 cut(s)	1221, 1224, 1233, 1242, 1260, 1269, 1523, 1716, 2304
BlsI	GCNGC	9 cut(s)	1222, 1225, 1234, 1243, 1261, 1270, 1524, 1717, 2305
BmcAI	AGTACT	2 cut(s)	402, 622
Bme1390I	CCNGG	1 cut(s)	1823
BmiI	GGNNCC	2 cut(s)	1105, 2412
BmrFI	CCNGG	1 cut(s)	1823
BmsI	GCATC	4 cut(s)	634, 890, 1855, 2111
BoxI	GACNNNNGTC	2 cut(s)	214, 1435
BpmI	CTGGAG	1 cut(s)	1806
Bpu10I	CCTNAGC	1 cut(s)	150
BpuMI	CCSGG	1 cut(s)	1823
Bsa29I	ATCGAT	1 cut(s)	128
BsaJI	CCNNGG	2 cut(s)	205, 1822
BsaWI	WCCGGW	3 cut(s)	551, 806, 1565
BsaXI	ACNNNNNCTCC	4 cut(s)	788, 818, 1359, 1389
Bsc4I	CCNNNNNNNGG	5 cut(s)	335, 664, 1556, 1885, 2407
Bse118I	RCCGGY	1 cut(s)	2027
Bse1I	ACTGG	3 cut(s)	349, 395, 1616
Bse3DI	GCAATG	2 cut(s)	182, 1725
BseAI	TCCGGA	1 cut(s)	806
BseCI	ATCGAT	1 cut(s)	128
BseDI	CCNNGG	2 cut(s)	205, 1822
BseGI	GGATG	6 cut(s)	181, 263, 1029, 1402, 1484, 2250
BseLI	CCNNNNNNNGG	5 cut(s)	335, 664, 1556, 1885, 2407
BseMI	GCAATG	2 cut(s)	182, 1725
BseNI	ACTGG	3 cut(s)	349, 395, 1616
BseRI	GAGGAG	3 cut(s)	99, 159, 1488
BseSI	GKGCMC	1 cut(s)	1906
BseXI	GCAGC	8 cut(s)	1219, 1235, 1246, 1253, 1280, 1534, 1702, 2290
BsgI	GTGCAG	4 cut(s)	89, 1229, 1299, 2391
Bsh1236I	CGCG	2 cut(s)	1220, 1295
Bsh1285I	CGRYCG	1 cut(s)	2368
BshFI	GGCC	1 cut(s)	155
BshVI	ATCGAT	1 cut(s)	128
BsiEI	CGRYCG	1 cut(s)	2368
BsiHKAI	GWGCWC	1 cut(s)	1906
BsiSI	CCGG	5 cut(s)	552, 807, 1566, 1822, 2028
BslFI	GGGAC	3 cut(s)	452, 1443, 1673
BslI	CCNNNNNNNGG	5 cut(s)	335, 664, 1556, 1885, 2407
BsmAI	GTCTC	3 cut(s)	326, 1547, 2283
BsmBI	CGTCTC	1 cut(s)	326
BsmFI	GGGAC	3 cut(s)	452, 1443, 1673
BsnI	GGCC	1 cut(s)	155
Bsp1286I	GDGCHC	2 cut(s)	544, 1906
Bsp13I	TCCGGA	1 cut(s)	806
Bsp143I	GATC	8 cut(s)	88, 308, 889, 1144, 1309, 1529, 1990, 2110
BspACI	CCGC	3 cut(s)	567, 1220, 2042
BspANI	GGCC	1 cut(s)	155
BspDI	ATCGAT	1 cut(s)	128
BspEI	TCCGGA	1 cut(s)	806
BspFNI	CGCG	2 cut(s)	1220, 1295
BspLI	GGNNCC	2 cut(s)	1105, 2412
BspMAI	CTGCAG	2 cut(s)	1237, 1264
BspMI	ACCTGC	2 cut(s)	1242, 1417
BspPI	GGATC	7 cut(s)	83, 316, 884, 1304, 1537, 1985, 2105
BsrDI	GCAATG	2 cut(s)	182, 1725
BsrFI	RCCGGY	1 cut(s)	2027
BsrI	ACTGG	3 cut(s)	349, 395, 1616
BssAI	RCCGGY	1 cut(s)	2027
BssECI	CCNNGG	2 cut(s)	205, 1822
BssMI	GATC	8 cut(s)	88, 308, 889, 1144, 1309, 1529, 1990, 2110
Bst6I	CTCTTC	1 cut(s)	498
BstAPI	GCANNNNNTGC	3 cut(s)	1232, 1277, 2179
BstDSI	CCRYGG	1 cut(s)	205
BstF5I	GGATG	6 cut(s)	181, 263, 1029, 1402, 1484, 2250
BstFNI	CGCG	2 cut(s)	1220, 1295
BstHHI	GCGC	5 cut(s)	528, 1048, 1220, 1295, 1749
BstKTI	GATC	8 cut(s)	91, 311, 892, 1147, 1312, 1532, 1993, 2113
BstMAI	GTCTC	3 cut(s)	326, 1547, 2283
BstMBI	GATC	8 cut(s)	88, 308, 889, 1144, 1309, 1529, 1990, 2110
BstMCI	CGRYCG	1 cut(s)	2368
BstNSI	RCATGY	3 cut(s)	526, 1082, 1747
BstPAI	GACNNNNGTC	2 cut(s)	214, 1435
BstSCI	CCNGG	1 cut(s)	1821
BstSFI	CTRYAG	3 cut(s)	1233, 1260, 2204
BstSLI	GKGCMC	1 cut(s)	1906
BstUI	CGCG	2 cut(s)	1220, 1295
BstV1I	GCAGC	8 cut(s)	1219, 1235, 1246, 1253, 1280, 1534, 1702, 2290
BstX2I	RGATCY	3 cut(s)	88, 889, 1309
BstYI	RGATCY	3 cut(s)	88, 889, 1309
Bsu15I	ATCGAT	1 cut(s)	128
BsuI	GTATCC	1 cut(s)	959
BsuRI	GGCC	1 cut(s)	155
BsuTUI	ATCGAT	1 cut(s)	128
BtgI	CCRYGG	1 cut(s)	205
BtgZI	GCGATG	1 cut(s)	1685
BtsCI	GGATG	6 cut(s)	181, 263, 1029, 1402, 1484, 2250
BtsI	GCAGTG	2 cut(s)	1217, 1242
BveI	ACCTGC	2 cut(s)	1242, 1417
CaiI	CAGNNNCTG	1 cut(s)	1232
CfoI	GCGC	5 cut(s)	528, 1048, 1220, 1295, 1749
Cfr10I	RCCGGY	1 cut(s)	2027
ClaI	ATCGAT	1 cut(s)	128
Csp6I	GTAC	5 cut(s)	73, 401, 621, 756, 1977
CspCI	CAANNNNNGTGG	2 cut(s)	1055, 1090
CviQI	GTAC	5 cut(s)	73, 401, 621, 756, 1977
DpnI	GATC	8 cut(s)	90, 310, 891, 1146, 1311, 1531, 1992, 2112
DpnII	GATC	8 cut(s)	88, 308, 889, 1144, 1309, 1529, 1990, 2110
DraI	TTTAAA	1 cut(s)	613
Eam1104I	CTCTTC	1 cut(s)	498
EarI	CTCTTC	1 cut(s)	498
Eco24I	GRGCYC	1 cut(s)	544
Eco57I	CTGAAG	2 cut(s)	387, 1608
EcoT38I	GRGCYC	1 cut(s)	544
Esp3I	CGTCTC	1 cut(s)	326
FaqI	GGGAC	3 cut(s)	452, 1443, 1673
FauI	CCCGC	1 cut(s)	2049
FauNDI	CATATG	2 cut(s)	844, 2065
Fnu4HI	GCNGC	9 cut(s)	1221, 1224, 1233, 1242, 1260, 1269, 1523, 1716, 2304
FokI	GGATG	6 cut(s)	188, 270, 1036, 1409, 1491, 2257
FriOI	GRGCYC	1 cut(s)	544
Fsp4HI	GCNGC	9 cut(s)	1221, 1224, 1233, 1242, 1260, 1269, 1523, 1716, 2304
FspAI	RTGCGCAY	1 cut(s)	1047
FspBI	CTAG	2 cut(s)	759, 1980
FspI	TGCGCA	1 cut(s)	1047
GlaI	GCGC	5 cut(s)	527, 1047, 1219, 1294, 1748
GluI	GCNGC	9 cut(s)	1221, 1224, 1233, 1242, 1260, 1269, 1523, 1716, 2304
GsuI	CTGGAG	1 cut(s)	1806
HaeIII	GGCC	1 cut(s)	155
HapII	CCGG	5 cut(s)	552, 807, 1566, 1822, 2028
HhaI	GCGC	5 cut(s)	528, 1048, 1220, 1295, 1749
Hin6I	GCGC	5 cut(s)	526, 1046, 1218, 1293, 1747
HinP1I	GCGC	5 cut(s)	526, 1046, 1218, 1293, 1747
HincII	GTYRAC	1 cut(s)	1891
HindII	GTYRAC	1 cut(s)	1891
HindIII	AAGCTT	3 cut(s)	355, 718, 1939
HpaII	CCGG	5 cut(s)	552, 807, 1566, 1822, 2028
HphI	GGTGA	5 cut(s)	16, 692, 742, 1555, 1963
Hpy166II	GTNNAC	7 cut(s)	209, 241, 342, 683, 1462, 1891, 1904
Hpy188I	TCNGA	9 cut(s)	277, 573, 795, 1130, 1341, 1529, 1794, 2016, 2351
Hpy188III	TCNNGA	7 cut(s)	315, 377, 694, 807, 1598, 1915, 2191
Hpy8I	GTNNAC	7 cut(s)	209, 241, 342, 683, 1462, 1891, 1904
Hpy99I	CGWCG	1 cut(s)	2351
HpyAV	CCTTC	3 cut(s)	1166, 1298, 1753
HpyCH4IV	ACGT	3 cut(s)	1491, 2145, 2294
HpySE526I	ACGT	3 cut(s)	1491, 2145, 2294
HspAI	GCGC	5 cut(s)	526, 1046, 1218, 1293, 1747
Kpn2I	TCCGGA	1 cut(s)	806
KroI	GCCGGC	1 cut(s)	2027
KroNI	GCCGGC	1 cut(s)	2029
Kzo9I	GATC	8 cut(s)	88, 308, 889, 1144, 1309, 1529, 1990, 2110
LmnI	GCTCC	4 cut(s)	146, 161, 1367, 1382
Lsp1109I	GCAGC	8 cut(s)	1219, 1235, 1246, 1253, 1280, 1534, 1702, 2290
LweI	GCATC	4 cut(s)	634, 890, 1855, 2111
MaeI	CTAG	2 cut(s)	759, 1980
MaeII	ACGT	3 cut(s)	1491, 2145, 2294
MaeIII	GTNAC	6 cut(s)	324, 948, 1030, 1492, 1637, 2146
MalI	GATC	8 cut(s)	90, 310, 891, 1146, 1311, 1531, 1992, 2112
MboI	GATC	8 cut(s)	88, 308, 889, 1144, 1309, 1529, 1990, 2110
MboII	GAAGA	7 cut(s)	380, 515, 778, 1597, 1601, 1688, 1999
MflI	RGATCY	3 cut(s)	88, 889, 1309
MhlI	GDGCHC	2 cut(s)	544, 1906
MlyI	GAGTC	3 cut(s)	1202, 1877, 2203
MmeI	TCCRAC	2 cut(s)	1108, 2329
MroI	TCCGGA	1 cut(s)	806
MroNI	GCCGGC	1 cut(s)	2027
MroXI	GAANNNNTTC	1 cut(s)	1922
MslI	CAYNNNNRTG	2 cut(s)	119, 1340
MspA1I	CMGCKG	2 cut(s)	2044, 2108
MspI	CCGG	5 cut(s)	552, 807, 1566, 1822, 2028
MspR9I	CCNGG	1 cut(s)	1823
MvnI	CGCG	2 cut(s)	1220, 1295
NaeI	GCCGGC	1 cut(s)	2029
NciI	CCSGG	1 cut(s)	1823
NdeI	CATATG	2 cut(s)	844, 2065
NdeII	GATC	8 cut(s)	88, 308, 889, 1144, 1309, 1529, 1990, 2110
NgoMIV	GCCGGC	1 cut(s)	2027
NlaIV	GGNNCC	2 cut(s)	1105, 2412
NmuCI	GTSAC	2 cut(s)	1492, 1637
NsbI	TGCGCA	1 cut(s)	1047
NspI	RCATGY	3 cut(s)	526, 1082, 1747
PaeI	GCATGC	3 cut(s)	526, 1082, 1747
PaqCI	CACCTGC	1 cut(s)	1242
PdiI	GCCGGC	1 cut(s)	2029
PdmI	GAANNNNTTC	1 cut(s)	1922
PfeI	GAWTC	9 cut(s)	406, 810, 973, 985, 1560, 2069, 2187, 2255, 2334
PflFI	GACNNNGTC	1 cut(s)	665
PflMI	CCANNNNNTGG	1 cut(s)	2407
PkrI	GCNGC	9 cut(s)	1222, 1225, 1234, 1243, 1261, 1270, 1524, 1717, 2305
PleI	GAGTC	3 cut(s)	1201, 1877, 2202
PpsI	GAGTC	3 cut(s)	1201, 1877, 2202
PshAI	GACNNNNGTC	2 cut(s)	214, 1435
PshBI	ATTAAT	1 cut(s)	1329
PsiI	TTATAA	1 cut(s)	107
Psp1406I	AACGTT	1 cut(s)	2145
PspN4I	GGNNCC	2 cut(s)	1105, 2412
PstI	CTGCAG	2 cut(s)	1237, 1264
PstNI	CAGNNNCTG	1 cut(s)	1232
PsuI	RGATCY	3 cut(s)	88, 889, 1309
PsyI	GACNNNGTC	1 cut(s)	665
PvuII	CAGCTG	1 cut(s)	2108
RsaI	GTAC	5 cut(s)	74, 402, 622, 757, 1978
RsaNI	GTAC	5 cut(s)	73, 401, 621, 756, 1977
RseI	CAYNNNNRTG	2 cut(s)	119, 1340
SatI	GCNGC	9 cut(s)	1221, 1224, 1233, 1242, 1260, 1269, 1523, 1716, 2304
Sau3AI	GATC	8 cut(s)	88, 308, 889, 1144, 1309, 1529, 1990, 2110
ScaI	AGTACT	2 cut(s)	402, 622
SchI	GAGTC	3 cut(s)	1202, 1877, 2203
ScrFI	CCNGG	1 cut(s)	1823
SduI	GDGCHC	2 cut(s)	544, 1906
SfaNI	GCATC	4 cut(s)	634, 890, 1855, 2111
SfcI	CTRYAG	3 cut(s)	1233, 1260, 2204
SmiMI	CAYNNNNRTG	2 cut(s)	119, 1340
SpeI	ACTAGT	1 cut(s)	1979
SphI	GCATGC	3 cut(s)	526, 1082, 1747
SsiI	CCGC	3 cut(s)	567, 1220, 2042
SspI	AATATT	1 cut(s)	351
SspMI	CTAG	2 cut(s)	759, 1980
StyD4I	CCNGG	1 cut(s)	1821
TaiI	ACGT	3 cut(s)	1494, 2148, 2297
TaqI	TCGA	6 cut(s)	128, 142, 669, 1196, 1989, 2364
TatI	WGTACW	5 cut(s)	72, 400, 620, 755, 1976
TauI	GCSGC	1 cut(s)	1223
TfiI	GAWTC	9 cut(s)	406, 810, 973, 985, 1560, 2069, 2187, 2255, 2334
TseFI	GTSAC	2 cut(s)	1492, 1637
TseI	GCWGC	8 cut(s)	1223, 1232, 1241, 1259, 1268, 1522, 1715, 2303
Tsp45I	GTSAC	2 cut(s)	1492, 1637
TspDTI	ATGAA	8 cut(s)	487, 974, 1026, 1185, 1317, 1412, 1531, 2247
TspGWI	ACGGA	2 cut(s)	1511, 2335
Tth111I	GACNNNGTC	1 cut(s)	665
Van91I	CCANNNNNTGG	1 cut(s)	2407
VneI	GTGCAC	1 cut(s)	1902
VspI	ATTAAT	1 cut(s)	1329
XapI	RAATTY	3 cut(s)	697, 1537, 1918
XceI	RCATGY	3 cut(s)	526, 1082, 1747
XmnI	GAANNNNTTC	1 cut(s)	1922
XspI	CTAG	2 cut(s)	759, 1980
ZrmI	AGTACT	2 cut(s)	402, 622

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.