Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0004741

Physical Location & Seq

Genomic Coordinates Reverse (-)

12910728 .. 12913744

Gene Structure 3017 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0156900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2718 bp

ATGGCCTCAAGCTCCCAACTAGCATATGCAGCATCAATTCCTTCGTCAGCTCCTCGTTGGAAGTATGATGTGTTTTTAAGTTTTAGGGGTAGAGATACTCGCAAGGGTATTACATTCGAATTATACAATCGACTGCAAAATAGTAGTGGAATTAAAACATTTATGGATGACCAAGACCTTGAAGTAGGGGATGTTATTTCTCCTACTCTCCTTACGGCAATTGAAGAATCAAGGTTTGCAATTGTAGTTCTCTCACTAAACTATGCTTCTTCTCCATGGTGTTTGGTGGAACTTACAAAGATATGTCAATGCATGAAAGACAATAATAGAATTCTGCCACTTTTTTATCACGTCGATCCCTCTGATGTACGATATCAGAAGAGGAGTTTTGAGGAGGCTTTCACTAAGCATGAAATCTCTGGGCGACACAGAGAAGAGGTGCAGCAATGGAGAGATGCTTTGAAGAAAGTGGCCAATTTCTCTGGTTGGCATACACAGAATTATAAAACTGAAAGAGAACTTGTTGCAGCCATTGTGGAATCTATGTGCAGTAAAATACAACCTAGTGAAATTGAGTTTACAATGCCCAAGGGAGATTTTGAAGCATATGAAGCAACAACACAAGCCATGGATAAGGTTATGAAGGCGCTACAAGATGATGAGGTCACTGTCGTAGGAGTCTATGGAATGGGAGGTGTCGGAAAGACGACCATGGTGGAACATGTCGGTGCACAAGCCTGCAATACTGGGCTTTTTGATCATGTTATTATGGCCCTTGTATCCCAAAGCCCTGACTTCAGTAAAATTCAAGGCACATTGGCAGATCTGTTGGAATTGAAATTAGAGGGGGAGACAGAAGTTGGAAGAGCTCGTAGATTACAGAAGGAGATAATTAGTAGAAATAAGATTCTTATAATCTTGGACGACATTTGGGAGATGATAGACTTGTCAAGAATAGGAATTCCTAGCTATGACCAGCTCCAAAGACGCAATTCCAAAGTCCTTCTCACCACAAGGAGATTTAATGTTTGTCATTCCATGGAGAGCCAGTCAAGCATCCCTCTCAATATCTTATCAGAAGAAGATTCTTGGAAATTGTTTGTGAAGAAAGCAAGAAAGTCTTTTGAAAATTCGACTAATTTCTATGATATTGCAAGGAAGGTAGCAAGAGAATGTGCTGGTCTACCAGTTGCGTTGATAGCAGTTGCGAGGGCACTTGGAGATAAAGATTTGGATGAATGGAAGGAAGCAGCTCGACGACTGAAGGCTTCTCAACCTGTCCACCCTGAAGATGGGAGAGTTGTGTTGAAATGTATAAAATTAAGCTATGATTACTTGAGATCTGATGATGCCAGATCATGCTTCTTACTTTGCTGCCTATTCCCAGAGGATTATGATATCCCAATTGAGGACTTGCTGGGGTATGGGTTCGGGAAAGGATTATTTCAACATTGCAACACATTGCAAGAAGCCAGAGCCACTGCTTATTCAGAGGTCAGGAACCTTAAAGCTTCTAGCTTGCTTTTGGCGGGTAAATATGACGAACAGGTTAGGATGCATGATGTCATTCGGGATATGGCCATACTAATTTCGTTCTCTGAAGACGGCCAACATTTTTTTGTCAAAGCTGGTTGTGAACTAAAGAATTGGCCAAAGATCAATACACAGAACGGCTACTCTGCAATCTCACTGATGTGGAATGAAATCCGCAAGCTACCCGAAGAGTTGCTTAAGAAGCTTGAGATTCTTAGTATGAAAGAATATCCTCTCACAGAATTGTCGAGAGAAATAGGACGTTTGACCAATCTAAGGAAGTTGGATGTCAGTTTTGATAGTTCCCGGTTAGGAGGTATTGTCACAATTCCATCTGAAGTTATATCAAAGTTACGTAGATTGGAAGAACTGTACATGCTGTACTGTGGATTTTGGTATTGGGGGAGTAAAGTTAAGGGAGAAGAAGGAACTAATATTGGCTTTGATGAGATAACTGGCTTATCATACTTGAACATATTGACGGTTTGCATATCTGATGCAGAATGCATCCCTAAAACTGTTGAGTTGGATCCAAATTGGGTGTACTTTGATATATGTATCAGCAGAGGCAGAAGAATGGTACCTAGCCAGTCTCATTATGGTCATAATTTAAGATCTTTGATTCTTGACAAACCCATCAATACCTTACCTTATTGGTTTGTCAACGTGGTGACAAAGAAATCGGAGAAGCTAGAGTATGAAGACTGCAGGGATTTGAATAACATTCTTGTGGAATATGACCATGGGATGTTACATGGACTGAAGCATCTCTCTGTAAGTGGTCCTTGTAAGAAGTTGCAAGAGTTGATGAACACGATAACATGGGTTCCAAATAAACCTGTGTTCGAGAACTTGGAGGAGTTGCACCTGCATAGACTGGATTGCCTGAAGGAGTTATGTGTTGGTGAATTACTACCTGGGTCTCTAAGCAACTTGAAGGTATTATATGTCTCTGGTTGTTGTTATTTGGGGAATGTACTTTTACCATCAAAATTGTTACAGAGACTACCAAATCTGGAGAAACTAATATGTCATGCTATGGCTAGCATGAAATATGTGTTTGGATGTGAAGGGTTTGAGGCAGAACAATCAAATTTAAGAGAGATGAAGTTGTTGAATCTGGAGGCAGTAAGAAGCATATGTAATGTTCCAGCTCGATCCACCTACAATGTTCCAGACTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006790 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016226 GO:0022607 GO:0031163 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0051186 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ HSCB_C

Protein Analysis

905

Amino Acids

103.09

Weight (kDa)

6.17

Isoelectric Point (pI)

50.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIR	PF01582	21 - 188	1.8e-49	TIR domain
TIR_2	PF13676	24 - 120	6e-14	TIR domain
NB-ARC	PF00931	207 - 372	3.2e-32	NB-ARC domain
LRR_RPS2	PF23247	796 - 894	3.2e-11	Plant disease resistance protein RPS2-like, leucine-rich repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004741)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06410
fragaria_vesca	FvH4_6g20780 FvH4_6g20780 FvH4_6g20780 FvH4_6g20780 FvH4_6g20780
malus_domestica	MD12G1044000.v1.1 MD14G1043000.v1.1
prunus_persica	Prupe.7G091100_v2.0.a1
pyrus_communis	pycom14g03660
rosa_chinensis	RchiOBHm_Chr3g0476751 RchiOBHm_Chr3g0476781
rosa_laevigata	RLG00000023752 RLG00000023754
rosa_multiflora	Rmu_sc0002399.1_g000008 Rmu_sc0008085.1_g000012 Rmu_sc0042226.1_g000001
rosa_roxburghii	Rroxscaffold_6G00405030
rosa_rugosa	Rorug03G0156700 Rorug03G0156800 Rorug03G0156900
rosa_samantha	Rh3AG206900 Rh3AG207100 Rh3BG239500 Rh3BG239600 Rh3CG233400 Rh3CG233500 Rh3DG233300
rosa_wichuraiana	Rw0G002330 Rw3G018830 Rw3G018860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	504, 914
AarI	CACCTGC	1 cut(s)	2409
Acc36I	ACCTGC	1 cut(s)	2409
Acc65I	GGTACC	1 cut(s)	2113
AccB1I	GGYRCC	1 cut(s)	2113
AccI	GTMKAC	1 cut(s)	1183
AciI	CCGC	2 cut(s)	1529, 1708
AclWI	GGATC	4 cut(s)	350, 2057, 2070, 2685
AcoI	YGGCCR	4 cut(s)	471, 1578, 1606, 1649
AcsI	RAATTY	5 cut(s)	330, 804, 960, 1129, 2626
AcuI	CTGAAG	7 cut(s)	781, 1283, 1308, 1620, 1890, 2315, 2441
AfaI	GTAC	6 cut(s)	369, 1907, 1916, 2078, 2115, 2511
AfiI	CCNNNNNNNGG	3 cut(s)	1292, 1408, 1809
AflII	CTTAAG	1 cut(s)	1730
AflIII	ACRYGT	1 cut(s)	721
AjiI	CACGTC	1 cut(s)	352
AjnI	CCWGG	1 cut(s)	2449
AleI	CACNNNNGTG	1 cut(s)	1693
Alw21I	GWGCWC	2 cut(s)	733, 871
Alw26I	GTCTC	5 cut(s)	845, 2130, 2460, 2488, 2530
Alw44I	GTGCAC	1 cut(s)	729
AlwI	GGATC	4 cut(s)	350, 2057, 2070, 2685
AoxI	GGCC	6 cut(s)	3, 471, 771, 1578, 1606, 1649
ApaLI	GTGCAC	1 cut(s)	729
ApeKI	GCWGC	5 cut(s)	29, 442, 527, 1250, 1374
ApoI	RAATTY	5 cut(s)	330, 804, 960, 1129, 2626
Asp718I	GGTACC	1 cut(s)	2113
AspLEI	GCGC	1 cut(s)	649
AspS9I	GGNCC	2 cut(s)	772, 2315
AsuC2I	CCSGG	1 cut(s)	1840
AsuHPI	GGTGA	3 cut(s)	1000, 2215, 2450
AsuII	TTCGAA	1 cut(s)	117
AsuNHI	GCTAGC	1 cut(s)	2576
AvaII	GGWCC	1 cut(s)	2315
BaeGI	GKGCMC	2 cut(s)	733, 1216
BalI	TGGCCA	3 cut(s)	473, 1580, 1651
BamHI	GGATCC	1 cut(s)	2062
BanI	GGYRCC	1 cut(s)	2113
BanII	GRGCYC	1 cut(s)	871
BbsI	GAAGAC	2 cut(s)	1608, 2241
Bbv12I	GWGCWC	2 cut(s)	733, 871
BbvI	GCAGC	5 cut(s)	41, 454, 539, 1262, 1361
BccI	CCATC	4 cut(s)	1286, 1873, 2177, 2527
BceAI	ACGGC	3 cut(s)	231, 1621, 1687
BciT130I	CCWGG	1 cut(s)	2451
BciVI	GTATCC	1 cut(s)	790
BclI	TGATCA	1 cut(s)	757
BcnI	CCSGG	1 cut(s)	1840
BcoDI	GTCTC	5 cut(s)	845, 2130, 2460, 2488, 2530
BfaI	CTAG	7 cut(s)	20, 564, 966, 1515, 2118, 2225, 2577
BfmI	CTRYAG	1 cut(s)	2239
BfoI	RGCGCY	1 cut(s)	650
BfrI	CTTAAG	1 cut(s)	1730
BfuAI	ACCTGC	1 cut(s)	2409
BfuI	GTATCC	1 cut(s)	790
BglII	AGATCT	3 cut(s)	823, 1340, 2147
BisI	GCNGC	5 cut(s)	30, 443, 528, 1251, 1375
BlsI	GCNGC	5 cut(s)	31, 444, 529, 1252, 1376
Bme1390I	CCNGG	2 cut(s)	1840, 2451
Bme18I	GGWCC	1 cut(s)	2315
BmgBI	CACGTC	1 cut(s)	352
BmgT120I	GGNCC	2 cut(s)	772, 2315
BmiI	GGNNCC	4 cut(s)	1502, 2064, 2115, 2361
BmrFI	CCNGG	2 cut(s)	1840, 2451
BmrI	ACTGGG	1 cut(s)	756
BmsI	GCATC	8 cut(s)	41, 445, 1065, 1339, 1545, 2020, 2049, 2308
BmtI	GCTAGC	1 cut(s)	2580
BmuI	ACTGGG	1 cut(s)	756
BpiI	GAAGAC	2 cut(s)	1608, 2241
BpmI	CTGGAG	2 cut(s)	2570, 2675
Bpu14I	TTCGAA	1 cut(s)	117
BpuEI	CTTGAG	2 cut(s)	1357, 1760
BpuMI	CCSGG	1 cut(s)	1840
BsaAI	YACGTR	1 cut(s)	1889
BsaI	GGTCTC	1 cut(s)	2460
BsaJI	CCNNGG	7 cut(s)	275, 588, 627, 711, 1038, 2275, 2450
BsaXI	ACNNNNNCTCC	4 cut(s)	1034, 1064, 1839, 1869
Bsc4I	CCNNNNNNNGG	3 cut(s)	1292, 1408, 1809
Bse1I	ACTGG	6 cut(s)	751, 1048, 1187, 1993, 2122, 2415
Bse3DI	GCAATG	3 cut(s)	452, 1450, 1460
BseBI	CCWGG	1 cut(s)	2451
BseDI	CCNNGG	7 cut(s)	275, 588, 627, 711, 1038, 2275, 2450
BseGI	GGATG	9 cut(s)	172, 196, 1056, 1240, 1560, 1825, 2040, 2286, 2603
BseLI	CCNNNNNNNGG	3 cut(s)	1292, 1408, 1809
BseMI	GCAATG	3 cut(s)	452, 1450, 1460
BseNI	ACTGG	6 cut(s)	751, 1048, 1187, 1993, 2122, 2415
BseRI	GAGGAG	4 cut(s)	42, 397, 407, 2405
BseSI	GKGCMC	2 cut(s)	733, 1216
BseXI	GCAGC	5 cut(s)	41, 454, 539, 1262, 1361
BseYI	CCCAGC	1 cut(s)	1417
BsgI	GTGCAG	2 cut(s)	461, 568
BshFI	GGCC	6 cut(s)	5, 473, 773, 1580, 1608, 1651
BshNI	GGYRCC	1 cut(s)	2113
BsiHKAI	GWGCWC	2 cut(s)	733, 871
BsiSI	CCGG	1 cut(s)	1840
BslI	CCNNNNNNNGG	3 cut(s)	1292, 1408, 1809
BsmAI	GTCTC	5 cut(s)	845, 2130, 2460, 2488, 2530
BsmI	GAATGC	1 cut(s)	2042
BsnI	GGCC	6 cut(s)	5, 473, 773, 1580, 1608, 1651
Bso31I	GGTCTC	1 cut(s)	2460
Bsp119I	TTCGAA	1 cut(s)	117
Bsp1286I	GDGCHC	3 cut(s)	733, 871, 1216
Bsp1407I	TGTACA	1 cut(s)	1905
Bsp143I	GATC	9 cut(s)	355, 757, 823, 1340, 1355, 1656, 2062, 2147, 2690
Bsp19I	CCATGG	5 cut(s)	275, 627, 711, 1038, 2275
BspACI	CCGC	2 cut(s)	1529, 1708
BspANI	GGCC	6 cut(s)	5, 473, 773, 1580, 1608, 1651
BspLI	GGNNCC	4 cut(s)	1502, 2064, 2115, 2361
BspMAI	CTGCAG	1 cut(s)	2243
BspMI	ACCTGC	1 cut(s)	2409
BspOI	GCTAGC	1 cut(s)	2580
BspPI	GGATC	4 cut(s)	350, 2057, 2070, 2685
BspQI	GCTCTTC	1 cut(s)	859
BspT104I	TTCGAA	1 cut(s)	117
BspT107I	GGYRCC	1 cut(s)	2113
BspTI	CTTAAG	1 cut(s)	1730
BspTNI	GGTCTC	1 cut(s)	2460
BsrDI	GCAATG	3 cut(s)	452, 1450, 1460
BsrGI	TGTACA	1 cut(s)	1905
BsrI	ACTGG	6 cut(s)	751, 1048, 1187, 1993, 2122, 2415
BssECI	CCNNGG	7 cut(s)	275, 588, 627, 711, 1038, 2275, 2450
BssMI	GATC	9 cut(s)	355, 757, 823, 1340, 1355, 1656, 2062, 2147, 2690
BssT1I	CCWWGG	6 cut(s)	275, 588, 627, 711, 1038, 2275
Bst2UI	CCWGG	1 cut(s)	2451
Bst4CI	ACNGT	5 cut(s)	670, 1905, 1919, 2017, 2053
Bst6I	CTCTTC	4 cut(s)	374, 429, 859, 1716
BstAFI	CTTAAG	1 cut(s)	1730
BstAUI	TGTACA	1 cut(s)	1905
BstBAI	YACGTR	1 cut(s)	1889
BstBI	TTCGAA	1 cut(s)	117
BstC8I	GCNNGC	4 cut(s)	739, 1520, 1712, 2578
BstDEI	CTNAG	4 cut(s)	405, 1748, 1808, 2459
BstDSI	CCRYGG	5 cut(s)	275, 627, 711, 1038, 2275
BstF5I	GGATG	9 cut(s)	172, 196, 1056, 1240, 1560, 1825, 2040, 2286, 2603
BstH2I	RGCGCY	1 cut(s)	650
BstHHI	GCGC	1 cut(s)	649
BstKTI	GATC	9 cut(s)	358, 760, 826, 1343, 1358, 1659, 2065, 2150, 2693
BstMAI	GTCTC	5 cut(s)	845, 2130, 2460, 2488, 2530
BstMBI	GATC	9 cut(s)	355, 757, 823, 1340, 1355, 1656, 2062, 2147, 2690
BstMWI	GCNNNNNNNGC	5 cut(s)	29, 611, 1053, 1199, 1735
BstNI	CCWGG	1 cut(s)	2451
BstNSI	RCATGY	2 cut(s)	725, 1912
BstSCI	CCNGG	2 cut(s)	1838, 2449
BstSFI	CTRYAG	1 cut(s)	2239
BstSLI	GKGCMC	2 cut(s)	733, 1216
BstSNI	TACGTA	1 cut(s)	1889
BstV1I	GCAGC	5 cut(s)	41, 454, 539, 1262, 1361
BstV2I	GAAGAC	2 cut(s)	1608, 2241
BstX2I	RGATCY	4 cut(s)	823, 1340, 2062, 2147
BstYI	RGATCY	4 cut(s)	823, 1340, 2062, 2147
BsuI	GTATCC	1 cut(s)	790
BsuRI	GGCC	6 cut(s)	5, 473, 773, 1580, 1608, 1651
BtgI	CCRYGG	5 cut(s)	275, 627, 711, 1038, 2275
BtrI	CACGTC	1 cut(s)	352
BtsCI	GGATG	9 cut(s)	172, 196, 1056, 1240, 1560, 1825, 2040, 2286, 2603
BtsI	GCAGTG	1 cut(s)	1479
BtsIMutI	CAGTG	3 cut(s)	666, 1479, 1688
BveI	ACCTGC	1 cut(s)	2409
Cac8I	GCNNGC	4 cut(s)	739, 1520, 1712, 2578
CfoI	GCGC	1 cut(s)	649
Cfr13I	GGNCC	2 cut(s)	772, 2315
CseI	GACGC	1 cut(s)	996
Csp6I	GTAC	6 cut(s)	368, 1906, 1915, 2077, 2114, 2510
CviQI	GTAC	6 cut(s)	368, 1906, 1915, 2077, 2114, 2510
DdeI	CTNAG	4 cut(s)	405, 1748, 1808, 2459
DpnI	GATC	9 cut(s)	357, 759, 825, 1342, 1357, 1658, 2064, 2149, 2692
DpnII	GATC	9 cut(s)	355, 757, 823, 1340, 1355, 1656, 2062, 2147, 2690
EaeI	YGGCCR	4 cut(s)	471, 1578, 1606, 1649
Eam1104I	CTCTTC	4 cut(s)	374, 429, 859, 1716
EarI	CTCTTC	4 cut(s)	374, 429, 859, 1716
Ecl136II	GAGCTC	1 cut(s)	869
Eco105I	TACGTA	1 cut(s)	1889
Eco130I	CCWWGG	6 cut(s)	275, 588, 627, 711, 1038, 2275
Eco24I	GRGCYC	1 cut(s)	871
Eco31I	GGTCTC	1 cut(s)	2460
Eco32I	GATATC	2 cut(s)	374, 1399
Eco47I	GGWCC	1 cut(s)	2315
Eco53kI	GAGCTC	1 cut(s)	869
Eco57I	CTGAAG	7 cut(s)	781, 1283, 1308, 1620, 1890, 2315, 2441
EcoICRI	GAGCTC	1 cut(s)	869
EcoRI	GAATTC	2 cut(s)	330, 960
EcoRII	CCWGG	1 cut(s)	2449
EcoRV	GATATC	2 cut(s)	374, 1399
EcoT14I	CCWWGG	6 cut(s)	275, 588, 627, 711, 1038, 2275
EcoT22I	ATGCAT	3 cut(s)	314, 1560, 2042
EcoT38I	GRGCYC	1 cut(s)	871
ErhI	CCWWGG	6 cut(s)	275, 588, 627, 711, 1038, 2275
FalI	AAGNNNNNCTT	6 cut(s)	1105, 1137, 1713, 1745, 2302, 2334
FauI	CCCGC	1 cut(s)	1522
FauNDI	CATATG	3 cut(s)	25, 607, 2672
FbaI	TGATCA	1 cut(s)	757
FblI	GTMKAC	1 cut(s)	1183
Fnu4HI	GCNGC	5 cut(s)	30, 443, 528, 1251, 1375
FokI	GGATG	9 cut(s)	179, 203, 1043, 1247, 1567, 1832, 2027, 2293, 2610
FriOI	GRGCYC	1 cut(s)	871
Fsp4HI	GCNGC	5 cut(s)	30, 443, 528, 1251, 1375
FspBI	CTAG	7 cut(s)	20, 564, 966, 1515, 2118, 2225, 2577
GlaI	GCGC	1 cut(s)	648
GluI	GCNGC	5 cut(s)	30, 443, 528, 1251, 1375
GsaI	CCCAGC	1 cut(s)	1421
GsuI	CTGGAG	2 cut(s)	2570, 2675
HaeII	RGCGCY	1 cut(s)	650
HaeIII	GGCC	6 cut(s)	5, 473, 773, 1580, 1608, 1651
HapII	CCGG	1 cut(s)	1840
HgaI	GACGC	1 cut(s)	996
HhaI	GCGC	1 cut(s)	649
Hin6I	GCGC	1 cut(s)	647
HinP1I	GCGC	1 cut(s)	647
HincII	GTYRAC	1 cut(s)	2197
HindII	GTYRAC	1 cut(s)	2197
HindIII	AAGCTT	2 cut(s)	1509, 1736
HinfI	GANTC	9 cut(s)	227, 539, 678, 907, 1085, 1744, 2155, 2650, 2711
HpaII	CCGG	1 cut(s)	1840
HphI	GGTGA	3 cut(s)	1000, 2215, 2450
Hpy166II	GTNNAC	7 cut(s)	579, 731, 1184, 1282, 1637, 2077, 2197
Hpy8I	GTNNAC	7 cut(s)	579, 731, 1184, 1282, 1637, 2077, 2197
Hpy99I	CGWCG	2 cut(s)	356, 1260
HpyCH4III	ACNGT	5 cut(s)	670, 1905, 1919, 2017, 2053
HpyCH4IV	ACGT	4 cut(s)	351, 1795, 1888, 2199
HpyF10VI	GCNNNNNNNGC	5 cut(s)	29, 611, 1053, 1199, 1735
HpyF3I	CTNAG	4 cut(s)	405, 1748, 1808, 2459
HpySE526I	ACGT	4 cut(s)	351, 1795, 1888, 2199
HspAI	GCGC	1 cut(s)	647
KpnI	GGTACC	1 cut(s)	2117
Ksp22I	TGATCA	1 cut(s)	757
Kzo9I	GATC	9 cut(s)	355, 757, 823, 1340, 1355, 1656, 2062, 2147, 2690
LguI	GCTCTTC	1 cut(s)	859
LmnI	GCTCC	3 cut(s)	17, 55, 984
Lsp1109I	GCAGC	5 cut(s)	41, 454, 539, 1262, 1361
LweI	GCATC	8 cut(s)	41, 445, 1065, 1339, 1545, 2020, 2049, 2308
MaeI	CTAG	7 cut(s)	20, 564, 966, 1515, 2118, 2225, 2577
MaeII	ACGT	4 cut(s)	351, 1795, 1888, 2199
MaeIII	GTNAC	6 cut(s)	664, 1855, 1884, 2203, 2283, 2529
MalI	GATC	9 cut(s)	357, 759, 825, 1342, 1357, 1658, 2064, 2149, 2692
MboI	GATC	9 cut(s)	355, 757, 823, 1340, 1355, 1656, 2062, 2147, 2690
MfeI	CAATTG	3 cut(s)	219, 240, 1404
MflI	RGATCY	4 cut(s)	823, 1340, 2062, 2147
MhlI	GDGCHC	3 cut(s)	733, 871, 1216
MlsI	TGGCCA	3 cut(s)	473, 1580, 1651
MluNI	TGGCCA	3 cut(s)	473, 1580, 1651
MlyI	GAGTC	2 cut(s)	687, 2705
MmeI	TCCRAC	6 cut(s)	38, 679, 810, 841, 1797, 2040
Mox20I	TGGCCA	3 cut(s)	473, 1580, 1651
Mph1103I	ATGCAT	3 cut(s)	314, 1560, 2042
MscI	TGGCCA	3 cut(s)	473, 1580, 1651
MslI	CAYNNNNRTG	3 cut(s)	726, 1693, 2261
Msp20I	TGGCCA	3 cut(s)	473, 1580, 1651
MspCI	CTTAAG	1 cut(s)	1730
MspI	CCGG	1 cut(s)	1840
MspR9I	CCNGG	2 cut(s)	1840, 2451
MunI	CAATTG	3 cut(s)	219, 240, 1404
Mva1269I	GAATGC	1 cut(s)	2042
MvaI	CCWGG	1 cut(s)	2451
MwoI	GCNNNNNNNGC	5 cut(s)	29, 611, 1053, 1199, 1735
NciI	CCSGG	1 cut(s)	1840
NcoI	CCATGG	5 cut(s)	275, 627, 711, 1038, 2275
NdeI	CATATG	3 cut(s)	25, 607, 2672
NdeII	GATC	9 cut(s)	355, 757, 823, 1340, 1355, 1656, 2062, 2147, 2690
NheI	GCTAGC	1 cut(s)	2576
NlaIV	GGNNCC	4 cut(s)	1502, 2064, 2115, 2361
NmuCI	GTSAC	3 cut(s)	664, 1855, 2203
NsiI	ATGCAT	3 cut(s)	314, 1560, 2042
NspI	RCATGY	2 cut(s)	725, 1912
NspV	TTCGAA	1 cut(s)	117
OliI	CACNNNNGTG	1 cut(s)	1693
PaqCI	CACCTGC	1 cut(s)	2409
PciI	ACATGT	1 cut(s)	721
PciSI	GCTCTTC	1 cut(s)	859
PctI	GAATGC	1 cut(s)	2042
PfeI	GAWTC	7 cut(s)	227, 539, 907, 1085, 1744, 2155, 2650
PkrI	GCNGC	5 cut(s)	31, 444, 529, 1252, 1376
PleI	GAGTC	2 cut(s)	686, 2705
PpsI	GAGTC	2 cut(s)	686, 2705
Ppu21I	YACGTR	1 cut(s)	1889
PscI	ACATGT	1 cut(s)	721
PsiI	TTATAA	2 cut(s)	504, 914
Psp124BI	GAGCTC	1 cut(s)	871
Psp6I	CCWGG	1 cut(s)	2449
PspFI	CCCAGC	1 cut(s)	1417
PspGI	CCWGG	1 cut(s)	2449
PspN4I	GGNNCC	4 cut(s)	1502, 2064, 2115, 2361
PspPI	GGNCC	2 cut(s)	772, 2315
PstI	CTGCAG	1 cut(s)	2243
PsuI	RGATCY	4 cut(s)	823, 1340, 2062, 2147
RsaI	GTAC	6 cut(s)	369, 1907, 1916, 2078, 2115, 2511
RsaNI	GTAC	6 cut(s)	368, 1906, 1915, 2077, 2114, 2510
RseI	CAYNNNNRTG	3 cut(s)	726, 1693, 2261
SacI	GAGCTC	1 cut(s)	871
SapI	GCTCTTC	1 cut(s)	859
SatI	GCNGC	5 cut(s)	30, 443, 528, 1251, 1375
Sau3AI	GATC	9 cut(s)	355, 757, 823, 1340, 1355, 1656, 2062, 2147, 2690
Sau96I	GGNCC	2 cut(s)	772, 2315
SchI	GAGTC	2 cut(s)	687, 2705
ScrFI	CCNGG	2 cut(s)	1840, 2451
SduI	GDGCHC	3 cut(s)	733, 871, 1216
SfaNI	GCATC	8 cut(s)	41, 445, 1065, 1339, 1545, 2020, 2049, 2308
SfcI	CTRYAG	1 cut(s)	2239
SfuI	TTCGAA	1 cut(s)	117
SinI	GGWCC	1 cut(s)	2315
SmiMI	CAYNNNNRTG	3 cut(s)	726, 1693, 2261
SmlI	CTYRAG	4 cut(s)	7, 1336, 1730, 1739
SmoI	CTYRAG	4 cut(s)	7, 1336, 1730, 1739
SnaBI	TACGTA	1 cut(s)	1889
SsiI	CCGC	2 cut(s)	1529, 1708
SspI	AATATT	1 cut(s)	1969
SspMI	CTAG	7 cut(s)	20, 564, 966, 1515, 2118, 2225, 2577
SstI	GAGCTC	1 cut(s)	871
StyD4I	CCNGG	2 cut(s)	1838, 2449
StyI	CCWWGG	6 cut(s)	275, 588, 627, 711, 1038, 2275
TaaI	ACNGT	5 cut(s)	670, 1905, 1919, 2017, 2053
TaiI	ACGT	4 cut(s)	354, 1798, 1891, 2202
TaqI	TCGA	8 cut(s)	117, 130, 354, 1133, 1255, 1781, 2379, 2689
TatI	WGTACW	4 cut(s)	1905, 1914, 2076, 2509
TfiI	GAWTC	7 cut(s)	227, 539, 907, 1085, 1744, 2155, 2650
TscAI	CASTG	3 cut(s)	673, 1486, 1695
TseFI	GTSAC	3 cut(s)	664, 1855, 2203
TseI	GCWGC	5 cut(s)	29, 442, 527, 1250, 1374
Tsp45I	GTSAC	3 cut(s)	664, 1855, 2203
TspRI	CASTG	3 cut(s)	673, 1486, 1695
Vha464I	CTTAAG	1 cut(s)	1730
VneI	GTGCAC	1 cut(s)	729
VpaK11BI	GGWCC	1 cut(s)	2315
XapI	RAATTY	5 cut(s)	330, 804, 960, 1129, 2626
XceI	RCATGY	2 cut(s)	725, 1912
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1289, 2129
XmiI	GTMKAC	1 cut(s)	1183
XspI	CTAG	7 cut(s)	20, 564, 966, 1515, 2118, 2225, 2577
Zsp2I	ATGCAT	3 cut(s)	314, 1560, 2042

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.