Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002893

Physical Location & Seq

Genomic Coordinates Reverse (-)

19375628 .. 19425973

Gene Structure 50346 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0214600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2535 bp

ATGGCAGGCTCTAAAAATGCGTCAAAGAAGAAGCAAAAGCGCGGTATCGACTTCAAGAAAATAAAGCGGAAGATTGGCAGAAAATTGCCACCAGCACAGAATGTTACAAATACTGAGATTAAATCTAAAGCAATTGTTCTCCCCGAGCAGAGTGTGGCATCCGAGAAGGCAGGATTAGCAGTGAACAAGAAAGGCTTGACTTTGAAAGAGCTTCTTCAACAAACATCTCATTACAGCTCAAAAGTCCGTAAAGACGCATTGTTGGGAATTAAGGATTTATTCCTTAAGCATCCAGAAGAGTTGAGGTTGCATAAGTACGCTGTTATTGAAAAATTGCGTGAACGGATTGGTGATGATGATAGACTAGTTCGAGAAACGCTGTATCAACTTTTCAAGTCAGTGATTTTCCCTGGATTTAAGGAGGATAATCAAGAGCTTTTTGTTTCCTTGATGATGGCCTATATATTTAATTCAATGACACATTTAGCAATTGATGTTCGACTGATGGCTTTCAAATTTTTGGAGCTTGTTATCCAGTACTATCCACCTTCCTTTTTCTTATATGCTGAAAAGATTCTTCAAAACTTTGAGGATATTTTGCGAAAGAACCAGTTTTATTTAGAGGACAAGAGCAAGCTGAAGAATGCTCTTTCTGGGTTGGAGCAATGCTTGTTACTGCTTCCATGTAACAAGAAAGAAGTTGGCTCATGTGAACAGAATGATGCTGGACAAGGGATGCTGCATGCTTTTGACCCTGATGTGCCTGCAGAATCTACTGGGTTTTCTCTCATCATCCCAAAACTAAAAGACCTTGTGCCAGTTCTAGTCAATTGTTTCCAAGATTTTATTCCTGCAGTACAGACTGGTGCACATCTTGATGTGCAATCATTTGATTGTATGGTGTCTATACTTCACAGTATAAATCATGCAGTCCGGTTCTTTGTTTATATGATTGATGAGGGTACGTCAGAATCACGACCTTCTGATGGGGAGCTTGATGTGGCTATGTTGGGTGGAACTATCTCCATGACGCTGATGAAGAAGTTACTTGTTCTGTTTCCCCTGAACATGAGAAATCAACTTTCTGAGAAGGATGATGTTAAATATTTTGTCCTGGACAGTGTGATGACAGAAATATTTCTGCACTTAAGCAAATGGATCTGCCCTCCCGGTGTTCTGTTGGAGAAATTTTTAGAATTTCTAGAGAATGCGCTGCTTGGAAAGATTTGTAGTAATAGACGCTCTGGTAAAGCAATCCAGGAGAAGCATTTAATTTCACTTCTTCCTTTTGTACCGAAACTTGTTTCGCAAGTGGCAAATGACTGGAAGTCTCGTCTTCTTCAGGCTTTTACTAAGGCATTCAAGGATTGCAATCCTGTGTCATCTTTAAAATTAGCTTGTCTTTCCACAATGGAGGAGATGGTTGTTCCTAGACAAGGCATGCTGTACCTGGATCCAAGGGATCCCGAGATATTATACTTTCAGATTGCCTGGATAAGAGAGCTTCCCATGTTGCTAATCCTGCTGGGTGATAAGAACACGTCCCACTCCCAGGTTGTGTTACACCTTTTACTTCGCCTGGGACAGCGTGCTTTCATGAACTATTCCTTTGCATTGGAATATGACAACATGCAATTCTCACTGCAAGAATTTTTCTGCATATATCAAGATGATGGTCCAGAATTGGAACAGTATGTAATAATTCGAGTCATAGAGATCCTGCATTCAGCTTATAAATCTGGACATATTCAAATTGCGGATCACATTAGTTTCTTCATCACTTTGCTCTCCCGCTTCAGAGTTTTGCCAGAAAATGTTAATGCTGTTATGGAGAGAGATGTGAATATCTCAAATCGGGGGACTTTTAAATCAATCACTGGCATTGTTTGCTCGTGTCTGTCACAGATGGGCGATAGTTCTCTTGTTTTTAAAATACTAGAAAAAATGGTACTAGATCAAATGTTGCAAAACCTTCCGCTAGACAATGTCTGTGCTATGCTTAGGATGCTTATTGCACTGGACTCTGAAGAGACAATAATTTCTGAACAAGCTTTTGTAAGCTTAGTCAAAATCCTTCCGCGATATCTTATTGACATTGTGCATTGCATTGCTGAAGATGATGGGAAGGCCTCTGGTTCCCTTTCCTCGAGTGCATGCTGTTATTATCTTGTTCCTTGCTTTTTCTTATTTGTTAAAAGTCACAGACTTCTGGGTCTTGTGTTGAAGACGTTGGGGTCATGGATAAATGAAAGTTTGTCAATTTTACCTTGCGATCATACCCACTATGAAACAGACATTTCAAGCAGGGTAGAAGCAATCATTTCAGTTCTTCTCTTGTTGCATAAGGATGACAAAATTTGGCAAATTATGTCTTCATTCAAGGCAGAGATTGACTGTATTTTGCAAAGCATCATCTCTATACAGTCCTCAGAGGAAATCAGCATGACCCTTCAAGAAAAGCACAAATTGAAATGTGCACATGATAGACTAAAGAACGCCACAAGTGCATTGCATGCTGAGATGCAGTCAGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

844

Amino Acids

95.97

Weight (kDa)

6.91

Isoelectric Point (pI)

43.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ipi1_N	PF12333	145 - 212	2.8e-08	Rix1 complex component involved in 60S ribosome maturation
TPR_TEX10	PF25781	624 - 812	7.4e-07	TEX10-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002893)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23610 AT5G23610
fragaria_vesca	FvH4_1g25830
malus_domestica	MD00G1096200.v1.1 MD15G1140600.v1.1
prunus_persica	Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1 Prupe.4G287900_v2.0.a1
pyrus_communis	pycom15g12710 pycom520g01260
rosa_chinensis	RchiOBHm_Chr3g0484951
rosa_laevigata	RLG00000023182
rosa_multiflora	Rmu_co8424235.1_g000001 Rmu_sc0002724.1_g000038
rosa_roxburghii	Rroxscaffold_6G00397310
rosa_rugosa	Rorug03G0214600
rosa_samantha	Rh3AG265100 Rh3BG300600 Rh3CG298400 Rh3DG294300
rosa_wichuraiana	Rw3G023680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1734
AasI	GACNNNNNNGTC	2 cut(s)	2211, 2233
AccII	CGCG	2 cut(s)	42, 2080
AciI	CCGC	6 cut(s)	42, 67, 1757, 1792, 1976, 2078
AclWI	GGATC	7 cut(s)	1166, 1448, 1457, 1461, 1470, 1711, 1767
AcsI	RAATTY	5 cut(s)	515, 1187, 1196, 1649, 2355
AcuI	CTGAAG	5 cut(s)	659, 1325, 1780, 2046, 2133
AfaI	GTAC	7 cut(s)	317, 539, 858, 964, 1293, 1448, 1950
AfiI	CCNNNNNNNGG	3 cut(s)	986, 1436, 1552
AflII	CTTAAG	2 cut(s)	284, 1147
AflIII	ACRYGT	1 cut(s)	1539
AhdI	GACNNNNNGTC	1 cut(s)	1327
AhlI	ACTAGT	1 cut(s)	364
AjiI	CACGTC	1 cut(s)	1542
AjnI	CCWGG	7 cut(s)	409, 1113, 1257, 1449, 1490, 1551, 1578
AjuI	GAANNNNNNNTTGG	2 cut(s)	831, 863
Alw21I	GWGCWC	2 cut(s)	871, 2479
Alw26I	GTCTC	2 cut(s)	1335, 2024
Alw44I	GTGCAC	2 cut(s)	867, 2475
AlwI	GGATC	7 cut(s)	1166, 1448, 1457, 1461, 1470, 1711, 1767
Ama87I	CYCGRG	3 cut(s)	143, 1466, 2146
AoxI	GGCC	2 cut(s)	456, 2127
ApaLI	GTGCAC	2 cut(s)	867, 2475
ApeKI	GCWGC	2 cut(s)	739, 1213
ApoI	RAATTY	5 cut(s)	515, 1187, 1196, 1649, 2355
Asp700I	GAANNNNTTC	2 cut(s)	573, 1137
AspLEI	GCGC	2 cut(s)	42, 1213
AspS9I	GGNCC	1 cut(s)	1676
AsuC2I	CCSGG	1 cut(s)	1170
AsuHPI	GGTGA	2 cut(s)	362, 1541
AvaI	CYCGRG	3 cut(s)	143, 1466, 2146
AvaII	GGWCC	1 cut(s)	1676
BaeGI	GKGCMC	2 cut(s)	871, 2479
BamHI	GGATCC	2 cut(s)	1453, 1462
BauI	CACGAG	1 cut(s)	1891
BbsI	GAAGAC	3 cut(s)	1328, 2231, 2364
Bbv12I	GWGCWC	2 cut(s)	871, 2479
BbvI	GCAGC	2 cut(s)	726, 1200
BccI	CCATC	7 cut(s)	448, 499, 980, 1414, 1667, 1900, 2114
BciT130I	CCWGG	7 cut(s)	411, 1115, 1259, 1451, 1492, 1553, 1580
BcnI	CCSGG	1 cut(s)	1170
BcoDI	GTCTC	2 cut(s)	1335, 2024
BcuI	ACTAGT	1 cut(s)	364
BfaI	CTAG	8 cut(s)	365, 824, 1202, 1431, 1937, 1952, 1979, 2533
BfmI	CTRYAG	2 cut(s)	765, 852
BfrI	CTTAAG	2 cut(s)	284, 1147
BisI	GCNGC	2 cut(s)	740, 1214
BlsI	GCNGC	2 cut(s)	741, 1215
BmcAI	AGTACT	1 cut(s)	539
Bme1390I	CCNGG	8 cut(s)	411, 1115, 1170, 1259, 1451, 1492, 1553, 1580
Bme18I	GGWCC	1 cut(s)	1676
BmeRI	GACNNNNNGTC	1 cut(s)	1327
BmeT110I	CYCGRG	3 cut(s)	143, 1466, 2146
BmgBI	CACGTC	1 cut(s)	1542
BmgT120I	GGNCC	1 cut(s)	1676
BmiI	GGNNCC	3 cut(s)	1455, 1464, 2137
BmrFI	CCNGG	8 cut(s)	411, 1115, 1170, 1259, 1451, 1492, 1553, 1580
BmrI	ACTGGG	1 cut(s)	786
BmsI	GCATC	7 cut(s)	167, 298, 712, 726, 1995, 2418, 2511
BmuI	ACTGGG	1 cut(s)	786
BpiI	GAAGAC	3 cut(s)	1328, 2231, 2364
Bpu10I	CCTNAGC	1 cut(s)	2000
BpuMI	CCSGG	1 cut(s)	1170
BsaBI	GATNNNNATC	1 cut(s)	1371
BsaJI	CCNNGG	4 cut(s)	409, 1457, 1551, 1579
BsaWI	WCCGGW	1 cut(s)	933
Bsc4I	CCNNNNNNNGG	3 cut(s)	986, 1436, 1552
Bse1I	ACTGG	8 cut(s)	535, 610, 781, 818, 868, 1328, 1882, 2022
Bse3DI	GCAATG	4 cut(s)	671, 2101, 2106, 2507
Bse8I	GATNNNNATC	1 cut(s)	1371
BseBI	CCWGG	7 cut(s)	411, 1115, 1259, 1451, 1492, 1553, 1580
BseDI	CCNNGG	4 cut(s)	409, 1457, 1551, 1579
BseGI	GGATG	7 cut(s)	158, 289, 741, 792, 1099, 2010, 2353
BseJI	GATNNNNATC	1 cut(s)	1371
BseLI	CCNNNNNNNGG	3 cut(s)	986, 1436, 1552
BseMI	GCAATG	4 cut(s)	671, 2101, 2106, 2507
BseMII	CTCAG	4 cut(s)	105, 1077, 2442, 2508
BseNI	ACTGG	8 cut(s)	535, 610, 781, 818, 868, 1328, 1882, 2022
BseRI	GAGGAG	1 cut(s)	1430
BseSI	GKGCMC	2 cut(s)	871, 2479
BseXI	GCAGC	2 cut(s)	726, 1200
BseYI	CCCAGC	1 cut(s)	1525
BsgI	GTGCAG	1 cut(s)	1127
Bsh1236I	CGCG	2 cut(s)	42, 2080
BshFI	GGCC	2 cut(s)	458, 2129
BsiHKAI	GWGCWC	2 cut(s)	871, 2479
BsiHKCI	CYCGRG	3 cut(s)	143, 1466, 2146
BsiSI	CCGG	2 cut(s)	934, 1170
BslFI	GGGAC	3 cut(s)	1528, 1596, 1873
BslI	CCNNNNNNNGG	3 cut(s)	986, 1436, 1552
BsmAI	GTCTC	2 cut(s)	1335, 2024
BsmFI	GGGAC	3 cut(s)	1528, 1596, 1873
BsmI	GAATGC	4 cut(s)	649, 1213, 1358, 1723
BsnI	GGCC	2 cut(s)	458, 2129
BsoBI	CYCGRG	3 cut(s)	143, 1466, 2146
Bsp1286I	GDGCHC	2 cut(s)	871, 2479
Bsp143I	GATC	7 cut(s)	1158, 1453, 1462, 1716, 1759, 1954, 2272
BspACI	CCGC	6 cut(s)	42, 67, 1757, 1792, 1976, 2078
BspANI	GGCC	2 cut(s)	458, 2129
BspCNI	CTCAG	4 cut(s)	106, 1078, 2441, 2509
BspFNI	CGCG	2 cut(s)	42, 2080
BspHI	TCATGA	1 cut(s)	1596
BspLI	GGNNCC	3 cut(s)	1455, 1464, 2137
BspMAI	CTGCAG	2 cut(s)	769, 856
BspPI	GGATC	7 cut(s)	1166, 1448, 1457, 1461, 1470, 1711, 1767
BspTI	CTTAAG	2 cut(s)	284, 1147
BsrDI	GCAATG	4 cut(s)	671, 2101, 2106, 2507
BsrI	ACTGG	8 cut(s)	535, 610, 781, 818, 868, 1328, 1882, 2022
BssECI	CCNNGG	4 cut(s)	409, 1457, 1551, 1579
BssMI	GATC	7 cut(s)	1158, 1453, 1462, 1716, 1759, 1954, 2272
BssSI	CACGAG	1 cut(s)	1891
BssT1I	CCWWGG	1 cut(s)	1457
Bst2BI	CACGAG	1 cut(s)	1891
Bst2UI	CCWGG	7 cut(s)	411, 1115, 1259, 1451, 1492, 1553, 1580
Bst4CI	ACNGT	5 cut(s)	917, 1121, 1692, 2396, 2424
Bst6I	CTCTTC	2 cut(s)	291, 2022
BstAFI	CTTAAG	2 cut(s)	284, 1147
BstAPI	GCANNNNNTGC	2 cut(s)	1887, 2513
BstC8I	GCNNGC	8 cut(s)	7, 635, 744, 765, 1442, 1590, 2155, 2514
BstDEI	CTNAG	7 cut(s)	114, 1086, 1353, 2000, 2062, 2428, 2517
BstENI	CCTNNNNNAGG	1 cut(s)	1434
BstF5I	GGATG	7 cut(s)	158, 289, 741, 792, 1099, 2010, 2353
BstFNI	CGCG	2 cut(s)	42, 2080
BstHHI	GCGC	2 cut(s)	42, 1213
BstKTI	GATC	7 cut(s)	1161, 1456, 1465, 1719, 1762, 1957, 2275
BstMAI	GTCTC	2 cut(s)	1335, 2024
BstMBI	GATC	7 cut(s)	1158, 1453, 1462, 1716, 1759, 1954, 2272
BstMWI	GCNNNNNNNGC	6 cut(s)	176, 1522, 1887, 2005, 2504, 2513
BstNI	CCWGG	7 cut(s)	411, 1115, 1259, 1451, 1492, 1553, 1580
BstNSI	RCATGY	5 cut(s)	746, 1444, 1633, 2157, 2516
BstSCI	CCNGG	8 cut(s)	409, 1113, 1168, 1257, 1449, 1490, 1551, 1578
BstSFI	CTRYAG	2 cut(s)	765, 852
BstSLI	GKGCMC	2 cut(s)	871, 2479
BstUI	CGCG	2 cut(s)	42, 2080
BstV1I	GCAGC	2 cut(s)	726, 1200
BstV2I	GAAGAC	3 cut(s)	1328, 2231, 2364
BstX2I	RGATCY	4 cut(s)	1158, 1453, 1462, 1716
BstYI	RGATCY	4 cut(s)	1158, 1453, 1462, 1716
BsuRI	GGCC	2 cut(s)	458, 2129
BtrI	CACGTC	1 cut(s)	1542
BtsCI	GGATG	7 cut(s)	158, 289, 741, 792, 1099, 2010, 2353
BtsI	GCAGTG	2 cut(s)	186, 1640
BtsIMutI	CAGTG	6 cut(s)	186, 405, 1126, 1640, 1875, 2015
Cac8I	GCNNGC	8 cut(s)	7, 635, 744, 765, 1442, 1590, 2155, 2514
CciI	TCATGA	1 cut(s)	1596
CfoI	GCGC	2 cut(s)	42, 1213
Cfr13I	GGNCC	1 cut(s)	1676
CseI	GACGC	4 cut(s)	9, 263, 1039, 1248
Csp6I	GTAC	7 cut(s)	316, 538, 857, 963, 1292, 1447, 1949
CviQI	GTAC	7 cut(s)	316, 538, 857, 963, 1292, 1447, 1949
DdeI	CTNAG	7 cut(s)	114, 1086, 1353, 2000, 2062, 2428, 2517
DpnI	GATC	7 cut(s)	1160, 1455, 1464, 1718, 1761, 1956, 2274
DpnII	GATC	7 cut(s)	1158, 1453, 1462, 1716, 1759, 1954, 2272
DraI	TTTAAA	3 cut(s)	1389, 1867, 1930
DrdI	GACNNNNNNGTC	2 cut(s)	2211, 2233
DriI	GACNNNNNGTC	1 cut(s)	1327
DseDI	GACNNNNNNGTC	2 cut(s)	2211, 2233
Eam1104I	CTCTTC	2 cut(s)	291, 2022
Eam1105I	GACNNNNNGTC	1 cut(s)	1327
EarI	CTCTTC	2 cut(s)	291, 2022
Eco130I	CCWWGG	1 cut(s)	1457
Eco147I	AGGCCT	1 cut(s)	2129
Eco32I	GATATC	1 cut(s)	2084
Eco47I	GGWCC	1 cut(s)	1676
Eco57I	CTGAAG	5 cut(s)	659, 1325, 1780, 2046, 2133
Eco88I	CYCGRG	3 cut(s)	143, 1466, 2146
EcoNI	CCTNNNNNAGG	1 cut(s)	1434
EcoRII	CCWGG	7 cut(s)	409, 1113, 1257, 1449, 1490, 1551, 1578
EcoRV	GATATC	1 cut(s)	2084
EcoT14I	CCWWGG	1 cut(s)	1457
ErhI	CCWWGG	1 cut(s)	1457
FalI	AAGNNNNNCTT	4 cut(s)	179, 211, 198, 230
FaqI	GGGAC	3 cut(s)	1528, 1596, 1873
FauI	CCCGC	1 cut(s)	1799
Fnu4HI	GCNGC	2 cut(s)	740, 1214
FokI	GGATG	7 cut(s)	145, 276, 748, 779, 1106, 2017, 2360
Fsp4HI	GCNGC	2 cut(s)	740, 1214
FspBI	CTAG	8 cut(s)	365, 824, 1202, 1431, 1937, 1952, 1979, 2533
GlaI	GCGC	2 cut(s)	41, 1212
GluI	GCNGC	2 cut(s)	740, 1214
GsaI	CCCAGC	1 cut(s)	1529
HaeIII	GGCC	2 cut(s)	458, 2129
HapII	CCGG	2 cut(s)	934, 1170
HgaI	GACGC	4 cut(s)	9, 263, 1039, 1248
HhaI	GCGC	2 cut(s)	42, 1213
Hin6I	GCGC	2 cut(s)	40, 1211
HinP1I	GCGC	2 cut(s)	40, 1211
HindIII	AAGCTT	2 cut(s)	2049, 2059
HinfI	GANTC	5 cut(s)	574, 770, 971, 1707, 2021
HpaII	CCGG	2 cut(s)	934, 1170
HphI	GGTGA	2 cut(s)	362, 1541
Hpy166II	GTNNAC	5 cut(s)	184, 341, 713, 869, 2477
Hpy188I	TCNGA	9 cut(s)	163, 970, 985, 1087, 1485, 1799, 2026, 2044, 2431
Hpy8I	GTNNAC	5 cut(s)	184, 341, 713, 869, 2477
HpyAV	CCTTC	8 cut(s)	160, 558, 990, 1084, 1982, 2084, 2119, 2459
HpyCH4III	ACNGT	5 cut(s)	917, 1121, 1692, 2396, 2424
HpyCH4IV	ACGT	3 cut(s)	965, 1541, 2228
HpyF10VI	GCNNNNNNNGC	6 cut(s)	176, 1522, 1887, 2005, 2504, 2513
HpyF3I	CTNAG	7 cut(s)	114, 1086, 1353, 2000, 2062, 2428, 2517
HpySE526I	ACGT	3 cut(s)	965, 1541, 2228
HspAI	GCGC	2 cut(s)	40, 1211
Kzo9I	GATC	7 cut(s)	1158, 1453, 1462, 1716, 1759, 1954, 2272
LmnI	GCTCC	3 cut(s)	523, 661, 991
Lsp1109I	GCAGC	2 cut(s)	726, 1200
LweI	GCATC	7 cut(s)	167, 298, 712, 726, 1995, 2418, 2511
MaeI	CTAG	8 cut(s)	365, 824, 1202, 1431, 1937, 1952, 1979, 2533
MaeII	ACGT	3 cut(s)	965, 1541, 2228
MaeIII	GTNAC	7 cut(s)	103, 672, 686, 1044, 1560, 1899, 2198
MalI	GATC	7 cut(s)	1160, 1455, 1464, 1718, 1761, 1956, 2274
MboI	GATC	7 cut(s)	1158, 1453, 1462, 1716, 1759, 1954, 2272
MfeI	CAATTG	3 cut(s)	132, 489, 829
MflI	RGATCY	4 cut(s)	1158, 1453, 1462, 1716
MhlI	GDGCHC	2 cut(s)	871, 2479
MlyI	GAGTC	2 cut(s)	1716, 2015
MmeI	TCCRAC	2 cut(s)	639, 1161
MroXI	GAANNNNTTC	2 cut(s)	573, 1137
MslI	CAYNNNNRTG	2 cut(s)	876, 2346
MspCI	CTTAAG	2 cut(s)	284, 1147
MspI	CCGG	2 cut(s)	934, 1170
MspR9I	CCNGG	8 cut(s)	411, 1115, 1170, 1259, 1451, 1492, 1553, 1580
MunI	CAATTG	3 cut(s)	132, 489, 829
Mva1269I	GAATGC	4 cut(s)	649, 1213, 1358, 1723
MvaI	CCWGG	7 cut(s)	411, 1115, 1259, 1451, 1492, 1553, 1580
MvnI	CGCG	2 cut(s)	42, 2080
MwoI	GCNNNNNNNGC	6 cut(s)	176, 1522, 1887, 2005, 2504, 2513
NciI	CCSGG	1 cut(s)	1170
NdeII	GATC	7 cut(s)	1158, 1453, 1462, 1716, 1759, 1954, 2272
NlaIV	GGNNCC	3 cut(s)	1455, 1464, 2137
NmuCI	GTSAC	2 cut(s)	1899, 2198
NspI	RCATGY	5 cut(s)	746, 1444, 1633, 2157, 2516
PaeI	GCATGC	4 cut(s)	746, 1444, 2157, 2516
PaeR7I	CTCGAG	1 cut(s)	2146
PagI	TCATGA	1 cut(s)	1596
PceI	AGGCCT	1 cut(s)	2129
PctI	GAATGC	4 cut(s)	649, 1213, 1358, 1723
PdmI	GAANNNNTTC	2 cut(s)	573, 1137
PfeI	GAWTC	3 cut(s)	574, 770, 971
PflFI	GACNNNGTC	1 cut(s)	1985
PfoI	TCCNGGA	2 cut(s)	1113, 1257
PkrI	GCNGC	2 cut(s)	741, 1215
PleI	GAGTC	2 cut(s)	1715, 2015
PpsI	GAGTC	2 cut(s)	1715, 2015
PsiI	TTATAA	1 cut(s)	1734
Psp6I	CCWGG	7 cut(s)	409, 1113, 1257, 1449, 1490, 1551, 1578
PspFI	CCCAGC	1 cut(s)	1525
PspGI	CCWGG	7 cut(s)	409, 1113, 1257, 1449, 1490, 1551, 1578
PspN4I	GGNNCC	3 cut(s)	1455, 1464, 2137
PspPI	GGNCC	1 cut(s)	1676
PspXI	VCTCGAGB	1 cut(s)	2146
PstI	CTGCAG	2 cut(s)	769, 856
PsuI	RGATCY	4 cut(s)	1158, 1453, 1462, 1716
PsyI	GACNNNGTC	1 cut(s)	1985
RsaI	GTAC	7 cut(s)	317, 539, 858, 964, 1293, 1448, 1950
RsaNI	GTAC	7 cut(s)	316, 538, 857, 963, 1292, 1447, 1949
RseI	CAYNNNNRTG	2 cut(s)	876, 2346
SatI	GCNGC	2 cut(s)	740, 1214
Sau3AI	GATC	7 cut(s)	1158, 1453, 1462, 1716, 1759, 1954, 2272
Sau96I	GGNCC	1 cut(s)	1676
ScaI	AGTACT	1 cut(s)	539
SchI	GAGTC	2 cut(s)	1716, 2015
ScrFI	CCNGG	8 cut(s)	411, 1115, 1170, 1259, 1451, 1492, 1553, 1580
SduI	GDGCHC	2 cut(s)	871, 2479
SfaNI	GCATC	7 cut(s)	167, 298, 712, 726, 1995, 2418, 2511
SfcI	CTRYAG	2 cut(s)	765, 852
Sfr274I	CTCGAG	1 cut(s)	2146
SinI	GGWCC	1 cut(s)	1676
SlaI	CTCGAG	1 cut(s)	2146
SmiMI	CAYNNNNRTG	2 cut(s)	876, 2346
SmlI	CTYRAG	3 cut(s)	284, 1147, 2146
SmoI	CTYRAG	3 cut(s)	284, 1147, 2146
SpeI	ACTAGT	1 cut(s)	364
SphI	GCATGC	4 cut(s)	746, 1444, 2157, 2516
SseBI	AGGCCT	1 cut(s)	2129
SsiI	CCGC	6 cut(s)	42, 67, 1757, 1792, 1976, 2078
SspI	AATATT	2 cut(s)	1106, 1137
SspMI	CTAG	8 cut(s)	365, 824, 1202, 1431, 1937, 1952, 1979, 2533
StuI	AGGCCT	1 cut(s)	2129
StyD4I	CCNGG	8 cut(s)	409, 1113, 1168, 1257, 1449, 1490, 1551, 1578
StyI	CCWWGG	1 cut(s)	1457
TaaI	ACNGT	5 cut(s)	917, 1121, 1692, 2396, 2424
TaiI	ACGT	3 cut(s)	968, 1544, 2231
TaqI	TCGA	5 cut(s)	48, 370, 499, 1705, 2147
TatI	WGTACW	2 cut(s)	537, 856
TfiI	GAWTC	3 cut(s)	574, 770, 971
TscAI	CASTG	6 cut(s)	186, 405, 1126, 1647, 1882, 2022
TseFI	GTSAC	2 cut(s)	1899, 2198
TseI	GCWGC	2 cut(s)	739, 1213
Tsp45I	GTSAC	2 cut(s)	1899, 2198
TspDTI	ATGAA	7 cut(s)	1052, 1585, 1613, 1765, 2262, 2301, 2364
TspGWI	ACGGA	2 cut(s)	236, 358
TspRI	CASTG	6 cut(s)	186, 405, 1126, 1647, 1882, 2022
Tth111I	GACNNNGTC	1 cut(s)	1985
Vha464I	CTTAAG	2 cut(s)	284, 1147
VneI	GTGCAC	2 cut(s)	867, 2475
VpaK11BI	GGWCC	1 cut(s)	1676
XagI	CCTNNNNNAGG	1 cut(s)	1434
XapI	RAATTY	5 cut(s)	515, 1187, 1196, 1649, 2355
XbaI	TCTAGA	1 cut(s)	1201
XceI	RCATGY	5 cut(s)	746, 1444, 1633, 2157, 2516
XhoI	CTCGAG	1 cut(s)	2146
XmnI	GAANNNNTTC	2 cut(s)	573, 1137
XspI	CTAG	8 cut(s)	365, 824, 1202, 1431, 1937, 1952, 1979, 2533
ZrmI	AGTACT	1 cut(s)	539

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.