Rorug03G0221300

Ribosomal protein L7Ae/L30e/S12e/Gadd45 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0013569
Physical Location & Seq
Reverse (-)
20190064 .. 20192253
2190 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0221300.1

Sequence Viewer

Length: 2190 bp
ATGGGTAAAAATATGGAGCTACCTATACCCAGAGAGGTGAAGAAGATATGGGACGTGTGGAATCTGCGGGGCTGTATTCTCTTAAGTCTCTCACTGCAACTTTCTCTGCTCTTGGCATCATTTCGGAAAAAATGCAGAAGCAAATTGCTACGAGGACTCATCTGGTCTGCGTATTTGCTCGCCGACTGGATTGCTGCTGTTGCAATAGGGATAATCACCAAATCCCAAGTTGACATTTGCGACTCGAAGGGCAACAAAGACCTTTTGGCATTCTGGGCTTCCTTTCTTCTACTCCATCTTGGCGGCCCTGATACCATTACCTCTTTTGCTCTTGAGGACAACGAGTTCTGGGTTAGGCACTTGGTTGGACTAATTGTTCAAGTTCTTGCAGCTGCTTATTGTTTCTACCTGACACTTGTTGATAACAAGTTCTGGGTTCCGACGGTGCTAGTCTTTGTTGTTGGAACAATCAAGTTTGGGGAGAGAACTTGTGCTCTGTATCTTGCAAGTGTAGACCATTTTGGGGAGACTGTATTGCCAAAGCCGGTCGCTGGACCTGACTATGAAGAAACTGTACAAATCCACACTTCAATGAGGTCAGTTGAAGTCCTTATAACACAAGTAGTGGTGCCAATCAAGCCATATATTGGGGATGCACATAAAGAATCTTTAAATGACATGCAATTGCTGCAAGAAGCGTATTACCTCTTTGAGAGCTTCAAAAGACTCATTGTTGGCTTCCTTCTCAGCTCCAAAGACCGAGAACTGAGTCGAGCTTTCTTCCTTAAAAGAACCTATACTAGCGCTTTTCAGTTGATAGAGTACGAGCTCAGCTTCATGTATGAGGTTCTTCACACCAAGGTTATTGTGGTGCGTTGCAAAATTGGGTACACCCTCCGCTTAGTAAGCTTCTGTGCAACCATTGTTGCCTTGGTGTTCTTCTTTTCAGTTGAAAAGAAAGAGTTTGCTAAGTTTGACATTGATCTTACTTATGCTTTGTTTAGTGGAGCCATTTTCCTGGACATCATATCTGTCTTTACGCTAATCTTCTCTGACTGGACCCTCATTGCCTTCAACAACACTAACATTTGGAGCAGATTTATTGCTGCTGTAATAATGAAAGGAGGAAGGTGGTCTGGATCGGTATCCCAATACAATATGATAAAGAATTGCCTGGATGAGCGTCCAGAATGTGTCTTTACTCTTGCCGGTTATCTGGGTGTTGGGGGAATTCTGGGCAGAATCAAAATTGTCTACTATTCGTCCTCGGAAGCAGTCACTGAAGAGCTCAAGTACTTTATCTTCAAGCAGCTGAGGTTAAAATCTTTGAAAGCAAACAACAGAAGGGATGGAATGGAGGCATGTTCACAAAGAGGTGACTGGGCTCTGCTGCTGAATTCAAACTATCAGGACCTCAAATGGAGCATTGGGGATTATCAATATGCGGAAAGTGTTCTTCTCTGGCACATTGCAACAGAACTCTACTATGCCGAAAGTGGAACCAAGCAATGTCCTCATAGTTATGGTAAACAAGCAACACAAAGGGCATGTGATAGTGACGATCAACTAACACTTTGCGATGCTTGTGAAAGTAACGCTTGGCGTAGTATTTGCAAACTTCTTTCAGATTATCTGTTTTATCTTCTGGTGATGCAGCATCCAATGATGGCCCCAGTTTTGGGGAATTGGCATATAGTGTTCCAGGACACTTGTGCAGAGGCCAAGAGATTCTTTCGCAAGCATTCAGTGAAAGATCATACGAATGCCTGTGAAGAGATTACTGGTGTGAAAGCCAAATACAGATCGGCGACTATGAAGGGAAGTAAAAGCAAATCTGTGCTGTTTGATGCATGTATGCTTGCAGAACAGCTTAAGGAGTCGAAGGCAGAACAGCTTAAGGAGTCGAAGGCAGAACAGCTTAAGGAGTCGAAGGCAGAACAGCTTAAGGAGTCGAAGGCAGAACAGCTTAAGGAGTCGAAGGCAGACCCATGGGAGCTAATGAGCCGGGTGTGGGTGGAATTATTGTCCTATGCTTCCATTAAATGTAGACCGATTGTACATGCTCAGCAACCAAGTAGGGGTGGAGAACTGATCACTTTCACTTGGCTACTGATGAATCACCTGGGCTTGGGAACACAATTCTACGAGCTCGAAAACCAAGCTGGAACAAAATGGGTGGCAGATAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ribosomal_L7Ae

Protein Analysis

729

Amino Acids

83.14

Weight (kDa)

8.33

Isoelectric Point (pI)

33.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4220 PF13968 55 - 389 2.8e-91 Domain of unknown function (DUF4220)
DUF594 PF04578 657 - 710 9.9e-19 Protein of unknown function, DUF594
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013569)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G01790
fragaria_vesca FvH4_1g26230 FvH4_1g26230 FvH4_1g26230
malus_domestica MD09G1290400.v1.1 MD17G1285100.v1.1
prunus_persica Prupe.3G002600_v2.0.a1
pyrus_communis pycom09g19840
rosa_chinensis RchiOBHm_Chr3g0485771
rosa_laevigata RLG00000023126
rosa_multiflora Rmu_sc0012870.1_g000001
rosa_roxburghii Rroxscaffold_6G00396320
rosa_rugosa Rorug03G0221300
rosa_samantha Rh3AG270600 Rh3BG306100 Rh3CG304500 Rh3DG300600
rosa_wichuraiana Rw3G024100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 614
AccB1I GGYRCC 1 cut(s) 628
AccB7I CCANNNNNTGG 1 cut(s) 647
AccI GTMKAC 3 cut(s) 513, 1254, 2047
AciI CCGC 4 cut(s) 67, 303, 898, 1445
AclWI GGATC 1 cut(s) 1147
AcsI RAATTY 2 cut(s) 1230, 1396
AcuI CTGAAG 1 cut(s) 1302
AfaI GTAC 5 cut(s) 576, 824, 890, 1295, 2058
AfeI AGCGCT 1 cut(s) 805
AfiI CCNNNNNNNGG 8 cut(s) 523, 551, 647, 1678, 1679, 2011, 2078, 2128
AflII CTTAAG 6 cut(s) 82, 1871, 1895, 1919, 1943, 1967
AflIII ACRYGT 1 cut(s) 54
AgsI TTSAA 9 cut(s) 380, 591, 605, 721, 953, 1075, 1306, 1330, 1401
AjiI CACGTC 1 cut(s) 55
AjnI CCWGG 4 cut(s) 1017, 1173, 1701, 2121
AloI GAACNNNNNNTCC 4 cut(s) 329, 360, 361, 392
Alw21I GWGCWC 4 cut(s) 496, 831, 1290, 2151
Alw26I GTCTC 2 cut(s) 92, 521
AlwI GGATC 1 cut(s) 1147
AlwNI CAGNNNCTG 1 cut(s) 1280
Aor51HI AGCGCT 1 cut(s) 805
AoxI GGCC 3 cut(s) 304, 1668, 1719
ApeKI GCWGC 8 cut(s) 194, 389, 392, 688, 1106, 1309, 1390, 1654
ApoI RAATTY 2 cut(s) 1230, 1396
Asp700I GAANNNNTTC 1 cut(s) 1452
AspLEI GCGC 1 cut(s) 806
AspS9I GGNCC 5 cut(s) 305, 554, 1059, 1411, 1669
AsuC2I CCSGG 1 cut(s) 2006
AsuHPI GGTGA 5 cut(s) 49, 208, 1388, 1660, 2111
AvaII GGWCC 3 cut(s) 554, 1059, 1411
BanI GGYRCC 1 cut(s) 628
BanII GRGCYC 4 cut(s) 831, 1290, 1387, 2151
BarI GAAGNNNNNNTAC 4 cut(s) 558, 590, 1286, 1318
Bbv12I GWGCWC 4 cut(s) 496, 831, 1290, 2151
BbvCI CCTCAGC 1 cut(s) 1313
BbvI GCAGC 8 cut(s) 181, 379, 401, 675, 1093, 1321, 1377, 1666
BccI CCATC 3 cut(s) 303, 1343, 1660
BcgI CGANNNNNNTGC 2 cut(s) 173, 207
BciT130I CCWGG 4 cut(s) 1019, 1175, 1703, 2123
BciVI GTATCC 1 cut(s) 1156
BclI TGATCA 1 cut(s) 2091
BcnI CCSGG 1 cut(s) 2006
BcoDI GTCTC 2 cut(s) 92, 521
BfaI CTAG 2 cut(s) 449, 801
BfoI RGCGCY 1 cut(s) 807
BfrI CTTAAG 6 cut(s) 82, 1871, 1895, 1919, 1943, 1967
BfuI GTATCC 1 cut(s) 1156
BisI GCNGC 9 cut(s) 195, 304, 390, 393, 689, 1107, 1310, 1391, 1655
BlpI GCTNAGC 2 cut(s) 830, 2064
BlsI GCNGC 9 cut(s) 196, 305, 391, 394, 690, 1108, 1311, 1392, 1656
BmcAI AGTACT 1 cut(s) 1295
Bme1390I CCNGG 5 cut(s) 1019, 1175, 1703, 2006, 2123
Bme18I GGWCC 3 cut(s) 554, 1059, 1411
BmgBI CACGTC 1 cut(s) 55
BmgT120I GGNCC 5 cut(s) 305, 554, 1059, 1411, 1669
BmiI GGNNCC 6 cut(s) 438, 630, 1009, 1061, 1501, 1671
BmrFI CCNGG 5 cut(s) 1019, 1175, 1703, 2006, 2123
BmrI ACTGGG 2 cut(s) 1390, 1667
BmsI GCATC 6 cut(s) 125, 643, 1570, 1641, 1666, 1837
BmuI ACTGGG 2 cut(s) 1390, 1667
Bpu10I CCTNAGC 1 cut(s) 1313
Bpu1102I GCTNAGC 2 cut(s) 830, 2064
BpuEI CTTGAG 2 cut(s) 353, 1274
BpuMI CCSGG 1 cut(s) 2006
BsaBI GATNNNNATC 1 cut(s) 1144
BsaJI CCNNGG 5 cut(s) 858, 930, 1266, 1988, 2122
Bsc4I CCNNNNNNNGG 8 cut(s) 523, 551, 647, 1678, 1679, 2011, 2078, 2128
Bse118I RCCGGY 2 cut(s) 544, 1208
Bse1I ACTGG 5 cut(s) 191, 1061, 1385, 1673, 1786
Bse3DI GCAATG 3 cut(s) 1065, 1467, 1514
Bse8I GATNNNNATC 1 cut(s) 1144
BseBI CCWGG 4 cut(s) 1019, 1175, 1703, 2123
BseDI CCNNGG 5 cut(s) 858, 930, 1266, 1988, 2122
BseGI GGATG 4 cut(s) 658, 1183, 1354, 1657
BseJI GATNNNNATC 1 cut(s) 1144
BseLI CCNNNNNNNGG 8 cut(s) 523, 551, 647, 1678, 1679, 2011, 2078, 2128
BseMI GCAATG 3 cut(s) 1065, 1467, 1514
BseMII CTCAG 5 cut(s) 758, 760, 844, 1304, 2078
BseNI ACTGG 5 cut(s) 191, 1061, 1385, 1673, 1786
BseXI GCAGC 8 cut(s) 181, 379, 401, 675, 1093, 1321, 1377, 1666
BsgI GTGCAG 1 cut(s) 1734
Bsh1285I CGRYCG 1 cut(s) 549
BshFI GGCC 3 cut(s) 306, 1670, 1721
BshNI GGYRCC 1 cut(s) 628
BsiEI CGRYCG 1 cut(s) 549
BsiHKAI GWGCWC 4 cut(s) 496, 831, 1290, 2151
BsiSI CCGG 3 cut(s) 545, 1209, 2005
BslFI GGGAC 1 cut(s) 65
BslI CCNNNNNNNGG 8 cut(s) 523, 551, 647, 1678, 1679, 2011, 2078, 2128
BsmAI GTCTC 2 cut(s) 92, 521
BsmFI GGGAC 1 cut(s) 65
BsmI GAATGC 3 cut(s) 269, 1741, 1768
BsnI GGCC 3 cut(s) 306, 1670, 1721
Bsp1286I GDGCHC 5 cut(s) 496, 831, 1290, 1387, 2151
Bsp1407I TGTACA 2 cut(s) 574, 2056
Bsp143I GATC 6 cut(s) 982, 1139, 1561, 1753, 1802, 2091
Bsp1720I GCTNAGC 2 cut(s) 830, 2064
Bsp19I CCATGG 1 cut(s) 1988
BspACI CCGC 4 cut(s) 67, 303, 898, 1445
BspANI GGCC 3 cut(s) 306, 1670, 1721
BspCNI CTCAG 5 cut(s) 759, 759, 843, 1305, 2077
BspLI GGNNCC 6 cut(s) 438, 630, 1009, 1061, 1501, 1671
BspPI GGATC 1 cut(s) 1147
BspQI GCTCTTC 1 cut(s) 1278
BspT107I GGYRCC 1 cut(s) 628
BspTI CTTAAG 6 cut(s) 82, 1871, 1895, 1919, 1943, 1967
BsrDI GCAATG 3 cut(s) 1065, 1467, 1514
BsrFI RCCGGY 2 cut(s) 544, 1208
BsrGI TGTACA 2 cut(s) 574, 2056
BsrI ACTGG 5 cut(s) 191, 1061, 1385, 1673, 1786
BssAI RCCGGY 2 cut(s) 544, 1208
BssECI CCNNGG 5 cut(s) 858, 930, 1266, 1988, 2122
BssMI GATC 6 cut(s) 982, 1139, 1561, 1753, 1802, 2091
BssT1I CCWWGG 3 cut(s) 858, 930, 1988
Bst2UI CCWGG 4 cut(s) 1019, 1175, 1703, 2123
Bst4CI ACNGT 3 cut(s) 445, 532, 574
Bst6I CTCTTC 2 cut(s) 1278, 1767
BstAFI CTTAAG 6 cut(s) 82, 1871, 1895, 1919, 1943, 1967
BstAPI GCANNNNNTGC 1 cut(s) 688
BstAUI TGTACA 2 cut(s) 574, 2056
BstC8I GCNNGC 3 cut(s) 180, 1739, 1860
BstDEI CTNAG 7 cut(s) 746, 767, 830, 901, 969, 1313, 2064
BstDSI CCRYGG 1 cut(s) 1988
BstF5I GGATG 4 cut(s) 658, 1183, 1354, 1657
BstH2I RGCGCY 1 cut(s) 807
BstHHI GCGC 1 cut(s) 806
BstKTI GATC 6 cut(s) 985, 1142, 1564, 1756, 1805, 2094
BstMAI GTCTC 2 cut(s) 92, 521
BstMBI GATC 6 cut(s) 982, 1139, 1561, 1753, 1802, 2091
BstMCI CGRYCG 1 cut(s) 549
BstMWI GCNNNNNNNGC 5 cut(s) 200, 275, 637, 688, 906
BstNI CCWGG 4 cut(s) 1019, 1175, 1703, 2123
BstNSI RCATGY 5 cut(s) 682, 1365, 1551, 1854, 2063
BstSCI CCNGG 5 cut(s) 1017, 1173, 1701, 2004, 2121
BstV1I GCAGC 8 cut(s) 181, 379, 401, 675, 1093, 1321, 1377, 1666
BstXI CCANNNNNNTGG 1 cut(s) 1018
BsuI GTATCC 1 cut(s) 1156
BsuRI GGCC 3 cut(s) 306, 1670, 1721
BtgI CCRYGG 1 cut(s) 1988
BtgZI GCGATG 1 cut(s) 1593
BtrI CACGTC 1 cut(s) 55
BtsCI GGATG 4 cut(s) 658, 1183, 1354, 1657
BtsI GCAGTG 1 cut(s) 92
BtsIMutI CAGTG 3 cut(s) 92, 1278, 1752
Cac8I GCNNGC 3 cut(s) 180, 1739, 1860
CaiI CAGNNNCTG 1 cut(s) 1280
CfoI GCGC 1 cut(s) 806
Cfr10I RCCGGY 2 cut(s) 544, 1208
Cfr13I GGNCC 5 cut(s) 305, 554, 1059, 1411, 1669
CseI GACGC 1 cut(s) 1172
Csp6I GTAC 5 cut(s) 575, 823, 889, 1294, 2057
CspCI CAANNNNNGTGG 1 cut(s) 2157
CviAII CATG 7 cut(s) 679, 838, 1362, 1548, 1851, 1989, 2060
CviQI GTAC 5 cut(s) 575, 823, 889, 1294, 2057
DdeI CTNAG 7 cut(s) 746, 767, 830, 901, 969, 1313, 2064
DpnI GATC 6 cut(s) 984, 1141, 1563, 1755, 1804, 2093
DpnII GATC 6 cut(s) 982, 1139, 1561, 1753, 1802, 2091
DraI TTTAAA 1 cut(s) 672
Eam1104I CTCTTC 2 cut(s) 1278, 1767
EarI CTCTTC 2 cut(s) 1278, 1767
Ecl136II GAGCTC 3 cut(s) 829, 1288, 2149
Eco130I CCWWGG 3 cut(s) 858, 930, 1988
Eco24I GRGCYC 4 cut(s) 831, 1290, 1387, 2151
Eco47I GGWCC 3 cut(s) 554, 1059, 1411
Eco47III AGCGCT 1 cut(s) 805
Eco53kI GAGCTC 3 cut(s) 829, 1288, 2149
Eco57I CTGAAG 1 cut(s) 1302
EcoICRI GAGCTC 3 cut(s) 829, 1288, 2149
EcoO109I RGGNCCY 1 cut(s) 1411
EcoRI GAATTC 2 cut(s) 1230, 1396
EcoRII CCWGG 4 cut(s) 1017, 1173, 1701, 2121
EcoT14I CCWWGG 3 cut(s) 858, 930, 1988
EcoT22I ATGCAT 1 cut(s) 1852
EcoT38I GRGCYC 4 cut(s) 831, 1290, 1387, 2151
ErhI CCWWGG 3 cut(s) 858, 930, 1988
FaeI CATG 7 cut(s) 682, 841, 1365, 1551, 1854, 1992, 2063
FalI AAGNNNNNCTT 4 cut(s) 1582, 1614, 1715, 1747
FaqI GGGAC 1 cut(s) 65
FatI CATG 7 cut(s) 678, 837, 1361, 1547, 1850, 1988, 2059
FauI CCCGC 1 cut(s) 60
FbaI TGATCA 1 cut(s) 2091
FblI GTMKAC 3 cut(s) 513, 1254, 2047
Fnu4HI GCNGC 9 cut(s) 195, 304, 390, 393, 689, 1107, 1310, 1391, 1655
FokI GGATG 4 cut(s) 665, 1190, 1361, 1644
FriOI GRGCYC 4 cut(s) 831, 1290, 1387, 2151
Fsp4HI GCNGC 9 cut(s) 195, 304, 390, 393, 689, 1107, 1310, 1391, 1655
FspBI CTAG 2 cut(s) 449, 801
GlaI GCGC 1 cut(s) 805
GluI GCNGC 9 cut(s) 195, 304, 390, 393, 689, 1107, 1310, 1391, 1655
HaeII RGCGCY 1 cut(s) 807
HaeIII GGCC 3 cut(s) 306, 1670, 1721
HapII CCGG 3 cut(s) 545, 1209, 2005
HgaI GACGC 1 cut(s) 1172
HhaI GCGC 1 cut(s) 806
Hin1II CATG 7 cut(s) 682, 841, 1365, 1551, 1854, 1992, 2063
Hin6I GCGC 1 cut(s) 804
HinP1I GCGC 1 cut(s) 804
HincII GTYRAC 1 cut(s) 232
HindII GTYRAC 1 cut(s) 232
HindIII AAGCTT 1 cut(s) 907
HpaII CCGG 3 cut(s) 545, 1209, 2005
HphI GGTGA 5 cut(s) 49, 208, 1388, 1660, 2111
Hpy166II GTNNAC 7 cut(s) 232, 514, 891, 1255, 1367, 1529, 2048
Hpy188I TCNGA 5 cut(s) 126, 441, 1054, 1270, 1627
Hpy188III TCNNGA 4 cut(s) 332, 1137, 1187, 1409
Hpy8I GTNNAC 7 cut(s) 232, 514, 891, 1255, 1367, 1529, 2048
Hpy99I CGWCG 1 cut(s) 445
HpyCH4III ACNGT 3 cut(s) 445, 532, 574
HpyCH4IV ACGT 1 cut(s) 54
HpyF10VI GCNNNNNNNGC 5 cut(s) 200, 275, 637, 688, 906
HpyF3I CTNAG 7 cut(s) 746, 767, 830, 901, 969, 1313, 2064
HpySE526I ACGT 1 cut(s) 54
Hsp92II CATG 7 cut(s) 682, 841, 1365, 1551, 1854, 1992, 2063
HspAI GCGC 1 cut(s) 804
Ksp22I TGATCA 1 cut(s) 2091
Kzo9I GATC 6 cut(s) 982, 1139, 1561, 1753, 1802, 2091
LguI GCTCTTC 1 cut(s) 1278
LmnI GCTCC 6 cut(s) 16, 755, 1007, 1092, 1422, 1993
Lsp1109I GCAGC 8 cut(s) 181, 379, 401, 675, 1093, 1321, 1377, 1666
LweI GCATC 6 cut(s) 125, 643, 1570, 1641, 1666, 1837
MaeI CTAG 2 cut(s) 449, 801
MaeII ACGT 1 cut(s) 54
MaeIII GTNAC 4 cut(s) 1276, 1376, 1556, 1592
MalI GATC 6 cut(s) 984, 1141, 1563, 1755, 1804, 2093
MboI GATC 6 cut(s) 982, 1139, 1561, 1753, 1802, 2091
MfeI CAATTG 1 cut(s) 683
MhlI GDGCHC 5 cut(s) 496, 831, 1290, 1387, 2151
MlyI GAGTC 9 cut(s) 150, 236, 720, 778, 1886, 1910, 1934, 1958, 1982
MmeI TCCRAC 3 cut(s) 346, 442, 464
Mph1103I ATGCAT 1 cut(s) 1852
MroXI GAANNNNTTC 1 cut(s) 1452
MslI CAYNNNNRTG 3 cut(s) 590, 1521, 1761
MspA1I CMGCKG 2 cut(s) 392, 1312
MspCI CTTAAG 6 cut(s) 82, 1871, 1895, 1919, 1943, 1967
MspI CCGG 3 cut(s) 545, 1209, 2005
MspR9I CCNGG 5 cut(s) 1019, 1175, 1703, 2006, 2123
MunI CAATTG 1 cut(s) 683
Mva1269I GAATGC 3 cut(s) 269, 1741, 1768
MvaI CCWGG 4 cut(s) 1019, 1175, 1703, 2123
MwoI GCNNNNNNNGC 5 cut(s) 200, 275, 637, 688, 906
NciI CCSGG 1 cut(s) 2006
NcoI CCATGG 1 cut(s) 1988
NdeII GATC 6 cut(s) 982, 1139, 1561, 1753, 1802, 2091
NlaIII CATG 7 cut(s) 682, 841, 1365, 1551, 1854, 1992, 2063
NlaIV GGNNCC 6 cut(s) 438, 630, 1009, 1061, 1501, 1671
NmuCI GTSAC 3 cut(s) 1276, 1376, 1556
NsiI ATGCAT 1 cut(s) 1852
NspI RCATGY 5 cut(s) 682, 1365, 1551, 1854, 2063
PciSI GCTCTTC 1 cut(s) 1278
PctI GAATGC 3 cut(s) 269, 1741, 1768
PdmI GAANNNNTTC 1 cut(s) 1452
PfeI GAWTC 5 cut(s) 61, 665, 1242, 1728, 2116
PflMI CCANNNNNTGG 1 cut(s) 647
PfoI TCCNGGA 2 cut(s) 1017, 1701
PkrI GCNGC 9 cut(s) 196, 305, 391, 394, 690, 1108, 1311, 1392, 1656
PleI GAGTC 9 cut(s) 150, 236, 720, 777, 1885, 1909, 1933, 1957, 1981
PpsI GAGTC 9 cut(s) 150, 236, 720, 777, 1885, 1909, 1933, 1957, 1981
PpuMI RGGWCCY 1 cut(s) 1411
PsiI TTATAA 1 cut(s) 614
Psp124BI GAGCTC 3 cut(s) 831, 1290, 2151
Psp5II RGGWCCY 1 cut(s) 1411
Psp6I CCWGG 4 cut(s) 1017, 1173, 1701, 2121
PspGI CCWGG 4 cut(s) 1017, 1173, 1701, 2121
PspN4I GGNNCC 6 cut(s) 438, 630, 1009, 1061, 1501, 1671
PspPI GGNCC 5 cut(s) 305, 554, 1059, 1411, 1669
PspPPI RGGWCCY 1 cut(s) 1411
PstNI CAGNNNCTG 1 cut(s) 1280
PvuII CAGCTG 2 cut(s) 392, 1312
RsaI GTAC 5 cut(s) 576, 824, 890, 1295, 2058
RsaNI GTAC 5 cut(s) 575, 823, 889, 1294, 2057
RseI CAYNNNNRTG 3 cut(s) 590, 1521, 1761
SacI GAGCTC 3 cut(s) 831, 1290, 2151
SapI GCTCTTC 1 cut(s) 1278
SatI GCNGC 9 cut(s) 195, 304, 390, 393, 689, 1107, 1310, 1391, 1655
Sau3AI GATC 6 cut(s) 982, 1139, 1561, 1753, 1802, 2091
Sau96I GGNCC 5 cut(s) 305, 554, 1059, 1411, 1669
ScaI AGTACT 1 cut(s) 1295
SchI GAGTC 9 cut(s) 150, 236, 720, 778, 1886, 1910, 1934, 1958, 1982
ScrFI CCNGG 5 cut(s) 1019, 1175, 1703, 2006, 2123
SduI GDGCHC 5 cut(s) 496, 831, 1290, 1387, 2151
SfaNI GCATC 6 cut(s) 125, 643, 1570, 1641, 1666, 1837
SinI GGWCC 3 cut(s) 554, 1059, 1411
SmiMI CAYNNNNRTG 3 cut(s) 590, 1521, 1761
SmlI CTYRAG 8 cut(s) 82, 332, 1289, 1871, 1895, 1919, 1943, 1967
SmoI CTYRAG 8 cut(s) 82, 332, 1289, 1871, 1895, 1919, 1943, 1967
SsiI CCGC 4 cut(s) 67, 303, 898, 1445
SspMI CTAG 2 cut(s) 449, 801
SstI GAGCTC 3 cut(s) 831, 1290, 2151
StyD4I CCNGG 5 cut(s) 1017, 1173, 1701, 2004, 2121
StyI CCWWGG 3 cut(s) 858, 930, 1988
TaaI ACNGT 3 cut(s) 445, 532, 574
TaiI ACGT 1 cut(s) 57
TaqI TCGA 8 cut(s) 245, 772, 1880, 1904, 1928, 1952, 1976, 2151
TaqII GACCGA 2 cut(s) 774, 2065
TatI WGTACW 3 cut(s) 574, 1293, 2056
TauI GCSGC 1 cut(s) 306
TfiI GAWTC 5 cut(s) 61, 665, 1242, 1728, 2116
TscAI CASTG 3 cut(s) 99, 1285, 1752
TseFI GTSAC 3 cut(s) 1276, 1376, 1556
TseI GCWGC 8 cut(s) 194, 389, 392, 688, 1106, 1309, 1390, 1654
Tsp45I GTSAC 3 cut(s) 1276, 1376, 1556
TspDTI ATGAA 5 cut(s) 579, 826, 1133, 1829, 2129
TspRI CASTG 3 cut(s) 99, 1285, 1752
Van91I CCANNNNNTGG 1 cut(s) 647
Vha464I CTTAAG 6 cut(s) 82, 1871, 1895, 1919, 1943, 1967
VpaK11BI GGWCC 3 cut(s) 554, 1059, 1411
XapI RAATTY 2 cut(s) 1230, 1396
XceI RCATGY 5 cut(s) 682, 1365, 1551, 1854, 2063
XcmI CCANNNNNNNNNTGG 2 cut(s) 865, 928
XmiI GTMKAC 3 cut(s) 513, 1254, 2047
XmnI GAANNNNTTC 1 cut(s) 1452
XspI CTAG 2 cut(s) 449, 801
ZrmI AGTACT 1 cut(s) 1295
Zsp2I ATGCAT 1 cut(s) 1852
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.