Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0007818

Physical Location & Seq

Genomic Coordinates Forward (+)

31936442 .. 31937839

Gene Structure 1398 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0302400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGGAAGGTTCAAGGAGTACCATGATCCGACTCAACCACTCAAATTGGATTACATGGAAGCTGAGAATGGAGGATATTTTCTATTGCAAAGATTTGCATGAGCCAATCGAAGGAGAGGAGGCCAAGCCAGAAGGGACATCAAATGAGAATTGGAAAAAGATGAACCGCAAAGCCATCGGTCATATCCGCGAATGGGTGGATGATAGTGTATTCCACCATGTGTCCAATGAAACCAACGCACATGAATTGTGGTTGAAGTTGGAGTCCTTGTTTGAGAAGAAGACCGCTGCCAAGAAAGCATTTCTAATCAAGGAGCTCGTAAACATGAAATATAAAGATGGTGTTAGAGTGATCGAGCACCTCAACAACTTCCAAAGTACAATCAATCAATTGGCCACGATGGACATGAAGGTTGATGATGAGTTGCAAGCCTTGTTGCTATTGGGATCGTTGCCGGATAATTGGGAGACCTTTGTTGTAACCGTAAGTAATTCTGCTCCAAATGGTGTATTGTCTATGGATAATGTTAAAAGTAACATGTTGAATGAAGAAACTAGAAAAAAATCTTCAAGCTCCGACAATAGCCAAGTCTTTGTGGCGGAGAATAGAGGAAGGAGCAAAAGCAGAGGTCCCAAAGGCCATGGAAGGAGTGTGAGCAGATCGAGGACAAAATTCAATGGAAAATGCCATCATTGTGGTGTTTTTGGCCACATGAAGAAGAATTGCAACGAGTTGAAGAAGGATCCAAAGGAGAGTCAAGATGGCAATAGTCATCAACCGAAGGATGACACAAAAAACACTGCAGCTTCCGTGTCTCATGATGAGTGTGAGTTCCTTTGTCTTGAAGGTGAATGTCTACATGTTGATGACTGTCCTGGTGTTGCATGGGTTGTTGATTCCGGAGCCTCTTTCCATGCCACTCCACACTTGGAGTACTTTACATACAAAGGTGGTGACTTTGGGATTGTGAAGATGGGCAACGATGGCTACTCCAAGATTTCAGGAATTGGAGATATTTTTTTTGAGACCGATTTAGGCAACAAGCTTATGTTGAAAGATGTTAGACATGTTCCGGGTCTACGTCTCAATTTGATGTCAACCGGTGTGCTTGACCGACAAGGGTTTCATTGGGCAACTTGGGAGAAGTTGTGCATCCCCAAGTCTGAAGGAGGCCTAGGTTTCTGTGATATGCATCTTTTCAACAAAGCTTTGTTGGCTAAACAAGGGTGGCGGTTGATGAGGAGGCCTGAGTCAGTGCTAGCTCAGGTTCTACGCGCTCTGTACTTTCCTGACAATGATTTCTTGAATGTCGAATTGAAGAAAGGGGCGTCCTATACATGGCCTAGCATTTTGGTTGGCAGGGATTTACTTAAGAAGGGCCTGAGGTTCCAGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000229 GO:0003674 GO:0003756 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0006139 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009295 GO:0009314 GO:0009408 GO:0009416 GO:0009507 GO:0009508 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009657 GO:0009658 GO:0009889 GO:0009941 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016020 GO:0016043 GO:0016070 GO:0016853 GO:0016860 GO:0016864 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0032774 GO:0034357 GO:0034641 GO:0034645 GO:0034654 GO:0042644 GO:0042646 GO:0042651 GO:0042793 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0055035 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:0140096 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PG_binding_1

Protein Analysis

465

Amino Acids

52.75

Weight (kDa)

8.21

Isoelectric Point (pI)

32.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Retrotran_gag_2	PF14223	26 - 191	1.2e-39	gag-polypeptide of LTR copia-type
Pol_BBD	PF22936	296 - 375	2.8e-19	Pol polyprotein, beta-barrel domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007818)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13670 AT4G13670 AT4G13670 AT4G13670
fragaria_vesca	FvH4_4g00470 FvH4_4g00470
malus_domestica	MD04G1005000.v1.1
prunus_persica	Prupe.1G004900_v2.0.a1 Prupe.3G076100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0385901
rosa_laevigata	RLG00000010204
rosa_multiflora	Rmu_co7989456.1_g000001 Rmu_sc0007400.1_g000001 Rmu_sc0008728.1_g000006
rosa_roxburghii	Rroxscaffold_5G00333490
rosa_rugosa	Rorug03G0302300 Rorug03G0302400 Rorug03G0302500
rosa_samantha	Rh4AG007100 Rh4BG004700 Rh4BG004800 Rh4CG007700 Rh4DG006700
rosa_wichuraiana	Rw4G000340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	856, 1078
AccII	CGCG	2 cut(s)	189, 1275
AccIII	TCCGGA	1 cut(s)	899
AciI	CCGC	5 cut(s)	166, 187, 285, 599, 1231
AclWI	GGATC	4 cut(s)	19, 454, 737, 750
AcoI	YGGCCR	2 cut(s)	393, 706
AcsI	RAATTY	1 cut(s)	671
AcuI	CTGAAG	1 cut(s)	1185
AcyI	GRCGYC	1 cut(s)	1328
AdeI	CACNNNGTG	1 cut(s)	220
AfaI	GTAC	4 cut(s)	19, 379, 935, 1283
AfiI	CCNNNNNNNGG	3 cut(s)	110, 193, 1338
AflII	CTTAAG	1 cut(s)	1370
AflIII	ACRYGT	3 cut(s)	537, 859, 1066
AgeI	ACCGGT	1 cut(s)	1100
AjnI	CCWGG	1 cut(s)	874
AluBI	AGCT	7 cut(s)	61, 316, 573, 806, 1045, 1208, 1262
AluI	AGCT	7 cut(s)	61, 316, 573, 806, 1045, 1208, 1262
Alw21I	GWGCWC	2 cut(s)	318, 360
Alw26I	GTCTC	4 cut(s)	461, 819, 1019, 1088
AlwI	GGATC	4 cut(s)	19, 454, 737, 750
Aor13HI	TCCGGA	1 cut(s)	899
AoxI	GGCC	8 cut(s)	120, 393, 637, 706, 1171, 1244, 1340, 1378
ApeKI	GCWGC	2 cut(s)	287, 803
ApoI	RAATTY	1 cut(s)	671
AsiGI	ACCGGT	1 cut(s)	1100
AspA2I	CCTAGG	1 cut(s)	1174
AspLEI	GCGC	1 cut(s)	1277
AspS9I	GGNCC	2 cut(s)	629, 1378
AsuC2I	CCSGG	1 cut(s)	1074
AsuHPI	GGTGA	2 cut(s)	860, 965
AsuNHI	GCTAGC	1 cut(s)	1258
AvaII	GGWCC	1 cut(s)	629
AvrII	CCTAGG	1 cut(s)	1174
AxyI	CCTNAGG	1 cut(s)	1382
BalI	TGGCCA	2 cut(s)	395, 708
BamHI	GGATCC	1 cut(s)	742
BanII	GRGCYC	1 cut(s)	318
BbsI	GAAGAC	1 cut(s)	287
Bbv12I	GWGCWC	2 cut(s)	318, 360
BbvI	GCAGC	2 cut(s)	274, 815
BccI	CCATC	7 cut(s)	182, 332, 394, 696, 755, 967, 977
BcgI	CGANNNNNNTGC	2 cut(s)	157, 191
BciT130I	CCWGG	1 cut(s)	876
BcnI	CCSGG	1 cut(s)	1074
BcoDI	GTCTC	4 cut(s)	461, 819, 1019, 1088
BfaI	CTAG	4 cut(s)	555, 1175, 1259, 1344
BfmI	CTRYAG	1 cut(s)	801
BfrI	CTTAAG	1 cut(s)	1370
BisI	GCNGC	2 cut(s)	288, 804
BlnI	CCTAGG	1 cut(s)	1174
BlsI	GCNGC	2 cut(s)	289, 805
BmcAI	AGTACT	1 cut(s)	935
Bme1390I	CCNGG	2 cut(s)	876, 1074
Bme18I	GGWCC	1 cut(s)	629
BmgT120I	GGNCC	2 cut(s)	629, 1378
BmiI	GGNNCC	4 cut(s)	631, 744, 904, 1388
BmrFI	CCNGG	2 cut(s)	876, 1074
BmsI	GCATC	2 cut(s)	1161, 1201
BmtI	GCTAGC	1 cut(s)	1262
BpiI	GAAGAC	1 cut(s)	287
Bpu10I	CCTNAGC	1 cut(s)	1263
BpuMI	CCSGG	1 cut(s)	1074
BsaBI	GATNNNNATC	1 cut(s)	1191
BsaHI	GRCGYC	1 cut(s)	1328
BsaI	GGTCTC	2 cut(s)	461, 1019
BsaJI	CCNNGG	2 cut(s)	640, 1174
BsaWI	WCCGGW	2 cut(s)	899, 1100
BsaXI	ACNNNNNCTCC	4 cut(s)	254, 284, 1133, 1163
Bsc4I	CCNNNNNNNGG	3 cut(s)	110, 193, 1338
Bse118I	RCCGGY	1 cut(s)	1100
Bse21I	CCTNAGG	1 cut(s)	1382
Bse8I	GATNNNNATC	1 cut(s)	1191
BseAI	TCCGGA	1 cut(s)	899
BseBI	CCWGG	1 cut(s)	876
BseDI	CCNNGG	2 cut(s)	640, 1174
BseGI	GGATG	3 cut(s)	205, 790, 1152
BseJI	GATNNNNATC	1 cut(s)	1191
BseLI	CCNNNNNNNGG	3 cut(s)	110, 193, 1338
BseMII	CTCAG	4 cut(s)	53, 1239, 1277, 1373
BseRI	GAGGAG	2 cut(s)	131, 1255
BseXI	GCAGC	2 cut(s)	274, 815
Bsh1236I	CGCG	2 cut(s)	189, 1275
BshFI	GGCC	8 cut(s)	122, 395, 639, 708, 1173, 1246, 1342, 1380
BshTI	ACCGGT	1 cut(s)	1100
BsiHKAI	GWGCWC	2 cut(s)	318, 360
BsiSI	CCGG	4 cut(s)	455, 900, 1073, 1101
BslFI	GGGAC	2 cut(s)	148, 615
BslI	CCNNNNNNNGG	3 cut(s)	110, 193, 1338
BsmAI	GTCTC	4 cut(s)	461, 819, 1019, 1088
BsmBI	CGTCTC	1 cut(s)	1088
BsmFI	GGGAC	2 cut(s)	148, 615
BsnI	GGCC	8 cut(s)	122, 395, 639, 708, 1173, 1246, 1342, 1380
Bso31I	GGTCTC	2 cut(s)	461, 1019
Bsp1286I	GDGCHC	2 cut(s)	318, 360
Bsp13I	TCCGGA	1 cut(s)	899
Bsp143I	GATC	5 cut(s)	24, 351, 446, 659, 742
Bsp19I	CCATGG	1 cut(s)	640
BspACI	CCGC	5 cut(s)	166, 187, 285, 599, 1231
BspANI	GGCC	8 cut(s)	122, 395, 639, 708, 1173, 1246, 1342, 1380
BspCNI	CTCAG	4 cut(s)	54, 1240, 1276, 1374
BspEI	TCCGGA	1 cut(s)	899
BspFNI	CGCG	2 cut(s)	189, 1275
BspHI	TCATGA	1 cut(s)	817
BspLI	GGNNCC	4 cut(s)	631, 744, 904, 1388
BspMAI	CTGCAG	1 cut(s)	805
BspOI	GCTAGC	1 cut(s)	1262
BspPI	GGATC	4 cut(s)	19, 454, 737, 750
BspTI	CTTAAG	1 cut(s)	1370
BspTNI	GGTCTC	2 cut(s)	461, 1019
BsrFI	RCCGGY	1 cut(s)	1100
BssAI	RCCGGY	1 cut(s)	1100
BssECI	CCNNGG	2 cut(s)	640, 1174
BssMI	GATC	5 cut(s)	24, 351, 446, 659, 742
BssNI	GRCGYC	1 cut(s)	1328
BssT1I	CCWWGG	2 cut(s)	640, 1174
Bst2UI	CCWGG	1 cut(s)	876
Bst4CI	ACNGT	2 cut(s)	484, 872
BstACI	GRCGYC	1 cut(s)	1328
BstAFI	CTTAAG	1 cut(s)	1370
BstC8I	GCNNGC	2 cut(s)	429, 1260
BstDEI	CTNAG	4 cut(s)	62, 1248, 1263, 1382
BstDSI	CCRYGG	1 cut(s)	640
BstF5I	GGATG	3 cut(s)	205, 790, 1152
BstFNI	CGCG	2 cut(s)	189, 1275
BstHHI	GCGC	1 cut(s)	1277
BstKTI	GATC	5 cut(s)	27, 354, 449, 662, 745
BstMAI	GTCTC	4 cut(s)	461, 819, 1019, 1088
BstMBI	GATC	5 cut(s)	24, 351, 446, 659, 742
BstMWI	GCNNNNNNNGC	3 cut(s)	296, 984, 1214
BstNI	CCWGG	1 cut(s)	876
BstNSI	RCATGY	3 cut(s)	541, 863, 1070
BstSCI	CCNGG	2 cut(s)	874, 1072
BstSFI	CTRYAG	1 cut(s)	801
BstUI	CGCG	2 cut(s)	189, 1275
BstV1I	GCAGC	2 cut(s)	274, 815
BstV2I	GAAGAC	1 cut(s)	287
BstX2I	RGATCY	1 cut(s)	742
BstXI	CCANNNNNNTGG	1 cut(s)	695
BstYI	RGATCY	1 cut(s)	742
Bsu36I	CCTNAGG	1 cut(s)	1382
BsuRI	GGCC	8 cut(s)	122, 395, 639, 708, 1173, 1246, 1342, 1380
BtgI	CCRYGG	1 cut(s)	640
BtsCI	GGATG	3 cut(s)	205, 790, 1152
BtsI	GCAGTG	1 cut(s)	798
BtsIMutI	CAGTG	2 cut(s)	798, 1260
Cac8I	GCNNGC	2 cut(s)	429, 1260
CciI	TCATGA	1 cut(s)	817
CfoI	GCGC	1 cut(s)	1277
Cfr10I	RCCGGY	1 cut(s)	1100
Cfr13I	GGNCC	2 cut(s)	629, 1378
CseI	GACGC	1 cut(s)	1317
Csp6I	GTAC	4 cut(s)	18, 378, 934, 1282
CspAI	ACCGGT	1 cut(s)	1100
CspCI	CAANNNNNGTGG	2 cut(s)	26, 61
CviQI	GTAC	4 cut(s)	18, 378, 934, 1282
DdeI	CTNAG	4 cut(s)	62, 1248, 1263, 1382
DpnI	GATC	5 cut(s)	26, 353, 448, 661, 744
DpnII	GATC	5 cut(s)	24, 351, 446, 659, 742
DraIII	CACNNNGTG	1 cut(s)	220
EaeI	YGGCCR	2 cut(s)	393, 706
EciI	GGCGGA	1 cut(s)	614
Ecl136II	GAGCTC	1 cut(s)	316
Eco130I	CCWWGG	2 cut(s)	640, 1174
Eco147I	AGGCCT	2 cut(s)	1173, 1246
Eco24I	GRGCYC	1 cut(s)	318
Eco31I	GGTCTC	2 cut(s)	461, 1019
Eco47I	GGWCC	1 cut(s)	629
Eco53kI	GAGCTC	1 cut(s)	316
Eco57I	CTGAAG	1 cut(s)	1185
Eco81I	CCTNAGG	1 cut(s)	1382
EcoICRI	GAGCTC	1 cut(s)	316
EcoO109I	RGGNCCY	2 cut(s)	629, 1378
EcoRII	CCWGG	1 cut(s)	874
EcoT14I	CCWWGG	2 cut(s)	640, 1174
EcoT22I	ATGCAT	1 cut(s)	1194
EcoT38I	GRGCYC	1 cut(s)	318
ErhI	CCWWGG	2 cut(s)	640, 1174
Esp3I	CGTCTC	1 cut(s)	1088
FaqI	GGGAC	2 cut(s)	148, 615
FblI	GTMKAC	2 cut(s)	856, 1078
Fnu4HI	GCNGC	2 cut(s)	288, 804
FokI	GGATG	3 cut(s)	212, 797, 1139
FriOI	GRGCYC	1 cut(s)	318
Fsp4HI	GCNGC	2 cut(s)	288, 804
FspBI	CTAG	4 cut(s)	555, 1175, 1259, 1344
GlaI	GCGC	1 cut(s)	1276
GluI	GCNGC	2 cut(s)	288, 804
HaeIII	GGCC	8 cut(s)	122, 395, 639, 708, 1173, 1246, 1342, 1380
HapII	CCGG	4 cut(s)	455, 900, 1073, 1101
HgaI	GACGC	1 cut(s)	1317
HhaI	GCGC	1 cut(s)	1277
Hin1I	GRCGYC	1 cut(s)	1328
Hin6I	GCGC	1 cut(s)	1275
HinP1I	GCGC	1 cut(s)	1275
HincII	GTYRAC	1 cut(s)	1098
HindII	GTYRAC	1 cut(s)	1098
HindIII	AAGCTT	2 cut(s)	1043, 1206
HinfI	GANTC	5 cut(s)	30, 263, 754, 896, 1250
HpaII	CCGG	4 cut(s)	455, 900, 1073, 1101
HphI	GGTGA	2 cut(s)	860, 965
Hpy166II	GTNNAC	4 cut(s)	322, 857, 1079, 1098
Hpy188I	TCNGA	3 cut(s)	29, 577, 1165
Hpy188III	TCNNGA	8 cut(s)	758, 818, 842, 900, 1002, 1289, 1303, 1390
Hpy8I	GTNNAC	4 cut(s)	322, 857, 1079, 1098
HpyCH4III	ACNGT	2 cut(s)	484, 872
HpyCH4IV	ACGT	1 cut(s)	1081
HpyCH4V	TGCA	8 cut(s)	87, 97, 427, 726, 803, 884, 1152, 1192
HpyF10VI	GCNNNNNNNGC	3 cut(s)	296, 984, 1214
HpyF3I	CTNAG	4 cut(s)	62, 1248, 1263, 1382
HpySE526I	ACGT	1 cut(s)	1081
Hsp92I	GRCGYC	1 cut(s)	1328
HspAI	GCGC	1 cut(s)	1275
Kpn2I	TCCGGA	1 cut(s)	899
Kzo9I	GATC	5 cut(s)	24, 351, 446, 659, 742
LmnI	GCTCC	5 cut(s)	313, 502, 578, 615, 902
Lsp1109I	GCAGC	2 cut(s)	274, 815
LweI	GCATC	2 cut(s)	1161, 1201
MaeI	CTAG	4 cut(s)	555, 1175, 1259, 1344
MaeII	ACGT	1 cut(s)	1081
MaeIII	GTNAC	3 cut(s)	478, 533, 953
MalI	GATC	5 cut(s)	26, 353, 448, 661, 744
MboI	GATC	5 cut(s)	24, 351, 446, 659, 742
MboII	GAAGA	9 cut(s)	289, 292, 558, 560, 727, 730, 748, 982, 1330
MfeI	CAATTG	1 cut(s)	389
MflI	RGATCY	1 cut(s)	742
MhlI	GDGCHC	2 cut(s)	318, 360
MlsI	TGGCCA	2 cut(s)	395, 708
MluNI	TGGCCA	2 cut(s)	395, 708
MlyI	GAGTC	4 cut(s)	24, 272, 763, 1259
MmeI	TCCRAC	3 cut(s)	52, 240, 600
Mox20I	TGGCCA	2 cut(s)	395, 708
Mph1103I	ATGCAT	1 cut(s)	1194
MroI	TCCGGA	1 cut(s)	899
MscI	TGGCCA	2 cut(s)	395, 708
MseI	TTAA	2 cut(s)	528, 1371
MslI	CAYNNNNRTG	3 cut(s)	693, 696, 864
Msp20I	TGGCCA	2 cut(s)	395, 708
MspA1I	CMGCKG	1 cut(s)	287
MspCI	CTTAAG	1 cut(s)	1370
MspI	CCGG	4 cut(s)	455, 900, 1073, 1101
MspR9I	CCNGG	2 cut(s)	876, 1074
MunI	CAATTG	1 cut(s)	389
MvaI	CCWGG	1 cut(s)	876
MvnI	CGCG	2 cut(s)	189, 1275
MwoI	GCNNNNNNNGC	3 cut(s)	296, 984, 1214
NciI	CCSGG	1 cut(s)	1074
NcoI	CCATGG	1 cut(s)	640
NdeII	GATC	5 cut(s)	24, 351, 446, 659, 742
NheI	GCTAGC	1 cut(s)	1258
NlaIV	GGNNCC	4 cut(s)	631, 744, 904, 1388
NmuCI	GTSAC	1 cut(s)	953
NsiI	ATGCAT	1 cut(s)	1194
NspI	RCATGY	3 cut(s)	541, 863, 1070
PagI	TCATGA	1 cut(s)	817
PceI	AGGCCT	2 cut(s)	1173, 1246
PciI	ACATGT	3 cut(s)	537, 859, 1066
PfeI	GAWTC	1 cut(s)	896
PinAI	ACCGGT	1 cut(s)	1100
PkrI	GCNGC	2 cut(s)	289, 805
PleI	GAGTC	4 cut(s)	24, 271, 762, 1258
PpsI	GAGTC	4 cut(s)	24, 271, 762, 1258
PpuMI	RGGWCCY	1 cut(s)	629
PscI	ACATGT	3 cut(s)	537, 859, 1066
Psp124BI	GAGCTC	1 cut(s)	318
Psp5II	RGGWCCY	1 cut(s)	629
Psp6I	CCWGG	1 cut(s)	874
PspGI	CCWGG	1 cut(s)	874
PspN4I	GGNNCC	4 cut(s)	631, 744, 904, 1388
PspPI	GGNCC	2 cut(s)	629, 1378
PspPPI	RGGWCCY	1 cut(s)	629
PstI	CTGCAG	1 cut(s)	805
PsuI	RGATCY	1 cut(s)	742
RsaI	GTAC	4 cut(s)	19, 379, 935, 1283
RsaNI	GTAC	4 cut(s)	18, 378, 934, 1282
RseI	CAYNNNNRTG	3 cut(s)	693, 696, 864
SacI	GAGCTC	1 cut(s)	318
SaqAI	TTAA	2 cut(s)	528, 1371
SatI	GCNGC	2 cut(s)	288, 804
Sau3AI	GATC	5 cut(s)	24, 351, 446, 659, 742
Sau96I	GGNCC	2 cut(s)	629, 1378
ScaI	AGTACT	1 cut(s)	935
SchI	GAGTC	4 cut(s)	24, 272, 763, 1259
ScrFI	CCNGG	2 cut(s)	876, 1074
SduI	GDGCHC	2 cut(s)	318, 360
SfaNI	GCATC	2 cut(s)	1161, 1201
SfcI	CTRYAG	1 cut(s)	801
SinI	GGWCC	1 cut(s)	629
SmiMI	CAYNNNNRTG	3 cut(s)	693, 696, 864
SmlI	CTYRAG	1 cut(s)	1370
SmoI	CTYRAG	1 cut(s)	1370
SseBI	AGGCCT	2 cut(s)	1173, 1246
SsiI	CCGC	5 cut(s)	166, 187, 285, 599, 1231
SspMI	CTAG	4 cut(s)	555, 1175, 1259, 1344
SstI	GAGCTC	1 cut(s)	318
StuI	AGGCCT	2 cut(s)	1173, 1246
StyD4I	CCNGG	2 cut(s)	874, 1072
StyI	CCWWGG	2 cut(s)	640, 1174
TaaI	ACNGT	2 cut(s)	484, 872
TaiI	ACGT	1 cut(s)	1084
TaqI	TCGA	4 cut(s)	108, 354, 662, 1311
TaqII	GACCGA	3 cut(s)	167, 1043, 1128
TatI	WGTACW	3 cut(s)	377, 933, 1281
TfiI	GAWTC	1 cut(s)	896
Tru1I	TTAA	2 cut(s)	528, 1371
Tru9I	TTAA	2 cut(s)	528, 1371
TscAI	CASTG	2 cut(s)	805, 1260
TseFI	GTSAC	1 cut(s)	953
TseI	GCWGC	2 cut(s)	287, 803
Tsp45I	GTSAC	1 cut(s)	953
TspDTI	ATGAA	8 cut(s)	176, 243, 258, 341, 422, 561, 728, 1115
TspGWI	ACGGA	1 cut(s)	799
TspRI	CASTG	2 cut(s)	805, 1260
Vha464I	CTTAAG	1 cut(s)	1370
VpaK11BI	GGWCC	1 cut(s)	629
XapI	RAATTY	1 cut(s)	671
XceI	RCATGY	3 cut(s)	541, 863, 1070
XcmI	CCANNNNNNNNNTGG	1 cut(s)	925
XmaJI	CCTAGG	1 cut(s)	1174
XmiI	GTMKAC	2 cut(s)	856, 1078
XspI	CTAG	4 cut(s)	555, 1175, 1259, 1344
ZrmI	AGTACT	1 cut(s)	935
Zsp2I	ATGCAT	1 cut(s)	1194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.