Rorug04G0011600

membrane protein At1g06890-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0007221
Physical Location & Seq
Forward (+)
1937297 .. 1945084
7788 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0011600.1

Sequence Viewer

Length: 3000 bp
ATGGCGACCTTAGTGAGCTCGGCAGGTGGTCTACTTGCCATGCTGAACGAGCCCCGTCCGGAGCTAAAGCTCTACGCTTTGTCCAACCTCAACAAATTGGTTGATGGGTTTTGGCCCGAGATCTCCACCAGCGTCCCCATCATAGAAAGTTTGTATGAAGATGAAGAGTTTGGTCAGCATCAAAGACAACTGGCTGCATTGCTTGTTTCAAAGGTTTTCTACTATTTGGGTGAACTTAATGACTCACTGTCCTACGCCCTTGGAGCTGGATCCTTATTTGACGTGTCAGAAGATTCTTATTATATTCATACTCTTCTTGCTAAAGCTATAGATGAGTATGCCAGTCTTAAGTCTAAGGCAGCAGAATCAAATGCTGAAGCAGCAAATGTGGATCCTAGGTTGGAGGCTATCGTGGAGAGAATGCTGAATAAGTGTATCCTGGATGGGAAATATCAACAAGCTATGGGGATTGCAATTGAATGTCGAAGACTGGATAAACTTGAGGAAGCAATCATAAAGAGTGATAATGTTCAAGGAACCCTGTCATATTGCATCAATGTCTCTCATTCATATATTAATCTTAGAGAATACAGACGTGAGGTGCTTCGTCTTCTTGTCAGAGTGTATCAAAAGCTGCCTTCTCCAGATTACTTGAGCATTTGTCAGTGTCTCATGTTCTTGGATGAACCAGAAGGTGTTGCAACCATATTGGAGAAGCTCCTGCGCTCTGAAAACAAGGAAGATGCACTTTTGGCATTTCAAATAGCCTTTGACCTTGTTGAGAATGAGCACCAAGCTTTTCTCTTAAATGTAAGAAATCGCCTTCCAGCTCCCAAGACTAAAACCTCAGAGCCAGTGCAACCAGAATCCAGTGAAGCTGCACAAAATGAAGGTTCTGCTCCAGGGGATGTTCAAATGACAGATGGAAGTTCTACTACCAGTGTGACTGTGCCTGAAGATCCAAGTGAAGTGATGTATTCCGAGAGACTGACAAAAATCAAAGGAATTTTGTCCGGAGAGACGTCGATAAAGTTGACCTTACAATTTCTGTACAGCCATAACAAGTCCGATCTGCTTATTCTGAAGACAATAAAGCAGTCTGTTGAGATGAGAAATAGTGTATGCCATAGTGCAACAATTTATGCTAATGCAATTATGCACGCTGGAACAACTGTGGATACATTTCTGAGGGAGAATCTGGACTGGTTAAGCAGAGCCACTAATTGGGCAAAATTCAGTGCAACAGCGGGGCTAGGTGTTATTCACAGAGGCCACTTGCAGCAGGGAAGATCTCTGATGGCACCTTACTTGCCTCAGGGTGGGGCTGGTGGTGGTGGAAGTCCGTACTCGGAAGGTGGTGCTCTGTATGCTCTGGGACTCATTCATGCCAACCATGGCGAGGGCATCAAACAGTTCCTTCGTGATAGCCTACGCAGTACTAATGTGGAGGTTATTCAACATGGGGCGTGCTTGGGTCTTGGCTTGTCAGCTTTAGGAACTGCTGATGAAGAGATTTATGATGACATTAAAAGTGTGCTGTATACTGACAGTGCCGTTGCTGGTGAAGCAGCTGGTATTAGTATGGGTTTACTCATGGTTGGAACTGCAAGTGAGAAGGCTAGTGAAATGCTTGCATATGCACATGAGACACAACATGAAAAGATCATCAGAGGGTTGGCATTGGGGATTGCCCTGACGGTATATGGAAGAGAAGAGGAAGCAGACACGCTAATTGAACAGATGACAAGAGATCAAGACCCCATATTGCGTTATGGTGGTATGTATGCATTGGCATTGGCCTATAGCGGGACAGCAAACAACAAAGCTATTCGCCAGCTGCTGCATTTTGCTGTGTCAGATGTGAGTGATGATGTTAGGAGAACTGCTGTTCTAGCCCTTGGTTTTGTCTTGTACTCTGAGCCAGAGCAGACGCCTCGTATTGTCTCCCTGCTATCTGAGTCCTACAACCCACATGTTCGATATGGTGCTGCTCTTGCAGTAGGAATTTCGTGTGCTGGTACTGGCTTGAGTGAGGCCATATCTTTGTTAGAGCCTCTGACTTCAGATGTTGTTGATTTTGTGCGCCAAGGTGCCCTCATTGCAATGGCTATGGTCATGGTCCAGATTAGTGAAGCTAGTGATTCTCGTGTTGGAGCTTTTAGGCGGCAATTGGAGAAAATAATTCTTGATAAGCATGAGGATACCATGAGCAAAATGGGAGCAATCTTGGCCTCTGGAATTCTTGACGCCGGCGGAAGGAATGTGACAATAAGACTACTTTCCAAGACAAAACATGATAAAGTCACTGCAGTGGTTGGCCTTGCTGTTTTCAGCCAATTTTGGTACTGGTATCCCCTCATATATTTTTTGAGCTTGGCATTCTCACCAACAGCTTTTATAGGACTGAACTATGACCTGAAAGTTCCGAAGTTTCAGTTCCTGTCATATGCAAAACCTTCTCTGTTTGAATATCCTAAACCGACCACTGTGGCAACCACTACATCGGCCGTGAAACTCCCCACTGCTGTTCTGTCAACATCAGCAAAGGCCACCAAAGCTAGGGCCAAGAAAGAAGCTGCAGATCAGAAGGCCAATCCTGAAAAGACAAATCCTGGGGGAGAGACATCTTCAGGAAAGGGAAAATCTTCTAGTGAGAAAGATGGGGATTCAATGCAGGTTGATAGCTCAACAGAGAAGAAATCAGAACCTGAACTGGCTTTTGAGTTTTTGACCAACCCAGCTAGGGTGGTTCCTGCTCAGGAGGAATACATTAAGTTTCTGGAAGAGAGCAGATATGTGCCTGTCAAGCTAGCACCATCAGGATTTGTTCTCTTGAGAGACCAAAGACCTACTGAACCAGAAGTGCTCTCACTTACGGATACACCCTCTTCTACAGCGTCACCTGCTGGTGGATCAGCAACTGGACAGCCAGGATCTGCATCGGCCATGGCAGTTGATGAAGAACCTCAACCTCCTCAGCCTTTTGAGTACACCGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPT

Protein Analysis

999

Amino Acids

108.65

Weight (kDa)

5.23

Isoelectric Point (pI)

44.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPN2_N PF21505 7 - 354 6.1e-90 26S proteasome subunit RPN2, N-terminal domain
PC_rep PF01851 488 - 521 8.2e-06 Proteasome/cyclosome repeat
HEAT_2 PF13646 611 - 703 2e-11 HEAT repeats
PC_rep PF01851 662 - 695 2.8e-06 Proteasome/cyclosome repeat
RPN2_C PF18004 797 - 955 9.2e-44 26S proteasome regulatory subunit RPN2 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 14, 2911
AatII GACGTC 1 cut(s) 1025
Acc36I ACCTGC 3 cut(s) 14, 2665, 2911
AccB1I GGYRCC 2 cut(s) 1300, 2090
AccB7I CCANNNNNTGG 1 cut(s) 1224
AccI GTMKAC 2 cut(s) 31, 1541
AccIII TCCGGA 2 cut(s) 58, 1013
AciI CCGC 4 cut(s) 1247, 1806, 2164, 2253
AclWI GGATC 7 cut(s) 264, 277, 386, 399, 953, 2920, 2941
AcoI YGGCCR 2 cut(s) 2505, 2943
AcsI RAATTY 4 cut(s) 1005, 1232, 2004, 2238
AcuI CTGAAG 5 cut(s) 396, 975, 1103, 2046, 2613
AcyI GRCGYC 3 cut(s) 1022, 1931, 2247
AdeI CACNNNGTG 1 cut(s) 2997
AfaI GTAC 7 cut(s) 1052, 1346, 1438, 1913, 2020, 2345, 2990
AfiI CCNNNNNNNGG 8 cut(s) 1224, 1319, 1399, 1806, 2256, 2559, 2743, 2909
AflII CTTAAG 1 cut(s) 347
AflIII ACRYGT 2 cut(s) 282, 1972
AgsI TTSAA 9 cut(s) 210, 479, 533, 761, 914, 1457, 1736, 2468, 2670
AhdI GACNNNNNGTC 1 cut(s) 247
AjiI CACGTC 2 cut(s) 283, 596
AjnI CCWGG 4 cut(s) 438, 901, 2611, 2929
AleI CACNNNNGTG 1 cut(s) 2309
Alw21I GWGCWC 4 cut(s) 20, 792, 1363, 2868
Alw26I GTCTC 8 cut(s) 565, 674, 979, 1013, 1640, 1948, 2615, 2832
AlwI GGATC 7 cut(s) 264, 277, 386, 399, 953, 2920, 2941
AlwNI CAGNNNCTG 5 cut(s) 1840, 2440, 2708, 2921, 2936
Ama87I CYCGRG 1 cut(s) 116
Aor13HI TCCGGA 2 cut(s) 58, 1013
ApoI RAATTY 4 cut(s) 1005, 1232, 2004, 2238
AseI ATTAAT 1 cut(s) 576
Asp700I GAANNNNTTC 1 cut(s) 2644
AspA2I CCTAGG 1 cut(s) 395
AspLEI GCGC 2 cut(s) 726, 2085
AspS9I GGNCC 3 cut(s) 114, 2119, 2562
AsuHPI GGTGA 4 cut(s) 242, 1574, 2376, 2892
AsuNHI GCTAGC 1 cut(s) 2809
AvaI CYCGRG 1 cut(s) 116
AvaII GGWCC 1 cut(s) 2119
AvrII CCTAGG 1 cut(s) 395
AxyI CCTNAGG 1 cut(s) 1314
BaeGI GKGCMC 1 cut(s) 2095
BamHI GGATCC 2 cut(s) 269, 391
BanI GGYRCC 2 cut(s) 1300, 2090
BanII GRGCYC 2 cut(s) 20, 54
BarI GAAGNNNNNNTAC 2 cut(s) 919, 951
BauI CACGAG 1 cut(s) 2145
BbsI GAAGAC 3 cut(s) 493, 602, 1091
Bbv12I GWGCWC 4 cut(s) 20, 792, 1363, 2868
BbvCI CCTCAGC 1 cut(s) 2976
BccI CCATC 7 cut(s) 98, 146, 437, 917, 1291, 2654, 2824
BceAI ACGGC 2 cut(s) 1538, 2492
BcgI CGANNNNNNTGC 2 cut(s) 1916, 1950
BciT130I CCWGG 4 cut(s) 440, 903, 2613, 2931
BciVI GTATCC 5 cut(s) 446, 1171, 2194, 2361, 2872
BcoDI GTCTC 8 cut(s) 565, 674, 979, 1013, 1640, 1948, 2615, 2832
BfaI CTAG 9 cut(s) 396, 1253, 1620, 1892, 2136, 2559, 2649, 2742, 2810
BfmI CTRYAG 5 cut(s) 327, 1801, 2307, 2577, 2892
BfrI CTTAAG 1 cut(s) 347
BfuAI ACCTGC 3 cut(s) 14, 2665, 2911
BfuI GTATCC 5 cut(s) 446, 1171, 2194, 2361, 2872
BglII AGATCT 2 cut(s) 120, 1289
BlnI CCTAGG 1 cut(s) 395
BmcAI AGTACT 1 cut(s) 1438
Bme1390I CCNGG 4 cut(s) 440, 903, 2613, 2931
Bme18I GGWCC 1 cut(s) 2119
BmeRI GACNNNNNGTC 1 cut(s) 247
BmeT110I CYCGRG 1 cut(s) 116
BmgBI CACGTC 2 cut(s) 283, 596
BmgT120I GGNCC 3 cut(s) 114, 2119, 2562
BmiI GGNNCC 6 cut(s) 271, 393, 538, 1302, 2092, 2751
BmrFI CCNGG 4 cut(s) 440, 903, 2613, 2931
BmsI GCATC 5 cut(s) 187, 561, 733, 1413, 2948
BmtI GCTAGC 1 cut(s) 2813
BpiI GAAGAC 3 cut(s) 493, 602, 1091
BpmI CTGGAG 2 cut(s) 627, 885
Bpu10I CCTNAGC 2 cut(s) 2757, 2976
BpuEI CTTGAG 4 cut(s) 521, 673, 2047, 2854
BsaBI GATNNNNATC 1 cut(s) 2938
BsaHI GRCGYC 3 cut(s) 1022, 1931, 2247
BsaI GGTCTC 1 cut(s) 2832
BsaJI CCNNGG 8 cut(s) 259, 395, 902, 1393, 1897, 2086, 2612, 2946
BsaWI WCCGGW 2 cut(s) 58, 1013
Bsc4I CCNNNNNNNGG 8 cut(s) 1224, 1319, 1399, 1806, 2256, 2559, 2743, 2909
Bse118I RCCGGY 1 cut(s) 2249
Bse21I CCTNAGG 1 cut(s) 1314
Bse3DI GCAATG 3 cut(s) 197, 2097, 2109
Bse8I GATNNNNATC 1 cut(s) 2938
BseAI TCCGGA 2 cut(s) 58, 1013
BseBI CCWGG 4 cut(s) 440, 903, 2613, 2931
BseDI CCNNGG 8 cut(s) 259, 395, 902, 1393, 1897, 2086, 2612, 2946
BseGI GGATG 3 cut(s) 448, 688, 913
BseJI GATNNNNATC 1 cut(s) 2938
BseLI CCNNNNNNNGG 8 cut(s) 1224, 1319, 1399, 1806, 2256, 2559, 2743, 2909
BseMI GCAATG 3 cut(s) 197, 2097, 2109
BseMII CTCAG 7 cut(s) 861, 1178, 1328, 1908, 1947, 2771, 2990
BseRI GAGGAG 1 cut(s) 2964
BseSI GKGCMC 1 cut(s) 2095
BseX3I CGGCCG 1 cut(s) 2505
BseYI CCCAGC 1 cut(s) 2737
BsgI GTGCAG 1 cut(s) 864
Bsh1285I CGRYCG 1 cut(s) 2508
BshNI GGYRCC 2 cut(s) 1300, 2090
BsiEI CGRYCG 1 cut(s) 2508
BsiHKAI GWGCWC 4 cut(s) 20, 792, 1363, 2868
BsiHKCI CYCGRG 1 cut(s) 116
BsiSI CCGG 3 cut(s) 59, 1014, 2250
BslFI GGGAC 3 cut(s) 119, 1389, 1822
BslI CCNNNNNNNGG 8 cut(s) 1224, 1319, 1399, 1806, 2256, 2559, 2743, 2909
BsmAI GTCTC 8 cut(s) 565, 674, 979, 1013, 1640, 1948, 2615, 2832
BsmBI CGTCTC 1 cut(s) 1013
BsmFI GGGAC 3 cut(s) 119, 1389, 1822
BsmI GAATGC 2 cut(s) 426, 2378
Bso31I GGTCTC 1 cut(s) 2832
BsoBI CYCGRG 1 cut(s) 116
Bsp1286I GDGCHC 6 cut(s) 20, 54, 792, 1363, 2095, 2868
Bsp13I TCCGGA 2 cut(s) 58, 1013
Bsp1407I TGTACA 1 cut(s) 1050
Bsp19I CCATGG 2 cut(s) 1393, 2946
BspACI CCGC 4 cut(s) 1247, 1806, 2164, 2253
BspCNI CTCAG 7 cut(s) 860, 1179, 1327, 1909, 1948, 2770, 2989
BspEI TCCGGA 2 cut(s) 58, 1013
BspLI GGNNCC 6 cut(s) 271, 393, 538, 1302, 2092, 2751
BspMAI CTGCAG 2 cut(s) 2311, 2581
BspMI ACCTGC 3 cut(s) 14, 2665, 2911
BspOI GCTAGC 1 cut(s) 2813
BspPI GGATC 7 cut(s) 264, 277, 386, 399, 953, 2920, 2941
BspT107I GGYRCC 2 cut(s) 1300, 2090
BspTI CTTAAG 1 cut(s) 347
BspTNI GGTCTC 1 cut(s) 2832
BsrDI GCAATG 3 cut(s) 197, 2097, 2109
BsrFI RCCGGY 1 cut(s) 2249
BsrGI TGTACA 1 cut(s) 1050
BssAI RCCGGY 1 cut(s) 2249
BssECI CCNNGG 8 cut(s) 259, 395, 902, 1393, 1897, 2086, 2612, 2946
BssNAI GTATAC 1 cut(s) 1542
BssNI GRCGYC 3 cut(s) 1022, 1931, 2247
BssSI CACGAG 1 cut(s) 2145
BssT1I CCWWGG 6 cut(s) 259, 395, 1393, 1897, 2086, 2946
Bst1107I GTATAC 1 cut(s) 1542
Bst2BI CACGAG 1 cut(s) 2145
Bst2UI CCWGG 4 cut(s) 440, 903, 2613, 2931
Bst4CI ACNGT 8 cut(s) 249, 949, 1174, 1413, 1550, 1699, 2488, 2995
Bst6I CTCTTC 7 cut(s) 159, 318, 1503, 1702, 1707, 2778, 2893
BstACI GRCGYC 3 cut(s) 1022, 1931, 2247
BstAFI CTTAAG 1 cut(s) 347
BstAUI TGTACA 1 cut(s) 1050
BstC8I GCNNGC 6 cut(s) 1161, 1468, 1632, 1835, 2251, 2811
BstDSI CCRYGG 2 cut(s) 1393, 2946
BstF5I GGATG 3 cut(s) 448, 688, 913
BstHHI GCGC 2 cut(s) 726, 2085
BstMAI GTCTC 8 cut(s) 565, 674, 979, 1013, 1640, 1948, 2615, 2832
BstMCI CGRYCG 1 cut(s) 2508
BstNI CCWGG 4 cut(s) 440, 903, 2613, 2931
BstNSI RCATGY 1 cut(s) 1976
BstSCI CCNGG 4 cut(s) 438, 901, 2611, 2929
BstSFI CTRYAG 5 cut(s) 327, 1801, 2307, 2577, 2892
BstSLI GKGCMC 1 cut(s) 2095
BstV2I GAAGAC 3 cut(s) 493, 602, 1091
BstX2I RGATCY 6 cut(s) 120, 269, 391, 958, 1289, 2933
BstYI RGATCY 6 cut(s) 120, 269, 391, 958, 1289, 2933
BstZ17I GTATAC 1 cut(s) 1542
BstZI CGGCCG 1 cut(s) 2505
Bsu36I CCTNAGG 1 cut(s) 1314
BsuI GTATCC 5 cut(s) 446, 1171, 2194, 2361, 2872
BtgI CCRYGG 2 cut(s) 1393, 2946
BtrI CACGTC 2 cut(s) 283, 596
BtsCI GGATG 3 cut(s) 448, 688, 913
BtsI GCAGTG 3 cut(s) 2304, 2316, 2520
BveI ACCTGC 3 cut(s) 14, 2665, 2911
Cac8I GCNNGC 6 cut(s) 1161, 1468, 1632, 1835, 2251, 2811
CaiI CAGNNNCTG 5 cut(s) 1840, 2440, 2708, 2921, 2936
CfoI GCGC 2 cut(s) 726, 2085
Cfr10I RCCGGY 1 cut(s) 2249
Cfr13I GGNCC 3 cut(s) 114, 2119, 2562
CseI GACGC 4 cut(s) 121, 1939, 2255, 2886
Csp6I GTAC 7 cut(s) 1051, 1345, 1437, 1912, 2019, 2344, 2989
CviQI GTAC 7 cut(s) 1051, 1345, 1437, 1912, 2019, 2344, 2989
DraIII CACNNNGTG 1 cut(s) 2997
DriI GACNNNNNGTC 1 cut(s) 247
EaeI YGGCCR 2 cut(s) 2505, 2943
EagI CGGCCG 1 cut(s) 2505
Eam1104I CTCTTC 7 cut(s) 159, 318, 1503, 1702, 1707, 2778, 2893
Eam1105I GACNNNNNGTC 1 cut(s) 247
EarI CTCTTC 7 cut(s) 159, 318, 1503, 1702, 1707, 2778, 2893
EciI GGCGGA 1 cut(s) 2268
Ecl136II GAGCTC 1 cut(s) 18
EclXI CGGCCG 1 cut(s) 2505
Eco130I CCWWGG 6 cut(s) 259, 395, 1393, 1897, 2086, 2946
Eco24I GRGCYC 2 cut(s) 20, 54
Eco31I GGTCTC 1 cut(s) 2832
Eco47I GGWCC 1 cut(s) 2119
Eco52I CGGCCG 1 cut(s) 2505
Eco53kI GAGCTC 1 cut(s) 18
Eco57I CTGAAG 5 cut(s) 396, 975, 1103, 2046, 2613
Eco81I CCTNAGG 1 cut(s) 1314
Eco88I CYCGRG 1 cut(s) 116
EcoICRI GAGCTC 1 cut(s) 18
EcoRI GAATTC 1 cut(s) 2238
EcoRII CCWGG 4 cut(s) 438, 901, 2611, 2929
EcoT14I CCWWGG 6 cut(s) 259, 395, 1393, 1897, 2086, 2946
EcoT22I ATGCAT 1 cut(s) 1789
EcoT38I GRGCYC 2 cut(s) 20, 54
ErhI CCWWGG 6 cut(s) 259, 395, 1393, 1897, 2086, 2946
Esp3I CGTCTC 1 cut(s) 1013
FalI AAGNNNNNCTT 4 cut(s) 732, 764, 1022, 1054
FaqI GGGAC 3 cut(s) 119, 1389, 1822
FauI CCCGC 2 cut(s) 1240, 1799
FauNDI CATATG 2 cut(s) 1636, 2446
FblI GTMKAC 2 cut(s) 31, 1541
FokI GGATG 3 cut(s) 455, 695, 920
FriOI GRGCYC 2 cut(s) 20, 54
FspBI CTAG 9 cut(s) 396, 1253, 1620, 1892, 2136, 2559, 2649, 2742, 2810
GlaI GCGC 2 cut(s) 725, 2084
GsaI CCCAGC 1 cut(s) 2741
GsuI CTGGAG 2 cut(s) 627, 885
HapII CCGG 3 cut(s) 59, 1014, 2250
HgaI GACGC 4 cut(s) 121, 1939, 2255, 2886
HhaI GCGC 2 cut(s) 726, 2085
Hin1I GRCGYC 3 cut(s) 1022, 1931, 2247
Hin6I GCGC 2 cut(s) 724, 2083
HinP1I GCGC 2 cut(s) 724, 2083
HincII GTYRAC 2 cut(s) 1035, 2535
HindII GTYRAC 2 cut(s) 1035, 2535
HindIII AAGCTT 1 cut(s) 795
HinfI GANTC 9 cut(s) 242, 293, 365, 866, 1195, 1377, 1958, 2141, 2666
HpaII CCGG 3 cut(s) 59, 1014, 2250
HphI GGTGA 4 cut(s) 242, 1574, 2376, 2892
Hpy166II GTNNAC 7 cut(s) 32, 233, 1035, 1542, 1589, 2535, 2991
Hpy8I GTNNAC 7 cut(s) 32, 233, 1035, 1542, 1589, 2535, 2991
Hpy99I CGWCG 1 cut(s) 1027
HpyCH4III ACNGT 8 cut(s) 249, 949, 1174, 1413, 1550, 1699, 2488, 2995
HpyCH4IV ACGT 3 cut(s) 282, 595, 1022
HpySE526I ACGT 3 cut(s) 282, 595, 1022
Hsp92I GRCGYC 3 cut(s) 1022, 1931, 2247
HspAI GCGC 2 cut(s) 724, 2083
Kpn2I TCCGGA 2 cut(s) 58, 1013
KroI GCCGGC 1 cut(s) 2249
KroNI GCCGGC 1 cut(s) 2251
LmnI GCTCC 7 cut(s) 61, 263, 723, 835, 904, 2153, 2219
LweI GCATC 5 cut(s) 187, 561, 733, 1413, 2948
MaeI CTAG 9 cut(s) 396, 1253, 1620, 1892, 2136, 2559, 2649, 2742, 2810
MaeII ACGT 3 cut(s) 282, 595, 1022
MaeIII GTNAC 4 cut(s) 943, 2263, 2302, 2898
MfeI CAATTG 2 cut(s) 474, 2168
MflI RGATCY 6 cut(s) 120, 269, 391, 958, 1289, 2933
MhlI GDGCHC 6 cut(s) 20, 54, 792, 1363, 2095, 2868
MlyI GAGTC 3 cut(s) 236, 1371, 1967
MmeI TCCRAC 4 cut(s) 108, 381, 1579, 2131
Mph1103I ATGCAT 1 cut(s) 1789
MreI CGCCGGCG 1 cut(s) 2249
MroI TCCGGA 2 cut(s) 58, 1013
MroNI GCCGGC 1 cut(s) 2249
MroXI GAANNNNTTC 1 cut(s) 2644
MseI TTAA 7 cut(s) 237, 348, 576, 806, 1208, 1527, 2772
MslI CAYNNNNRTG 2 cut(s) 2102, 2309
MspA1I CMGCKG 3 cut(s) 1247, 1571, 1837
MspCI CTTAAG 1 cut(s) 347
MspI CCGG 3 cut(s) 59, 1014, 2250
MspR9I CCNGG 4 cut(s) 440, 903, 2613, 2931
MunI CAATTG 2 cut(s) 474, 2168
Mva1269I GAATGC 2 cut(s) 426, 2378
MvaI CCWGG 4 cut(s) 440, 903, 2613, 2931
NaeI GCCGGC 1 cut(s) 2251
NcoI CCATGG 2 cut(s) 1393, 2946
NdeI CATATG 2 cut(s) 1636, 2446
NgoMIV GCCGGC 1 cut(s) 2249
NheI GCTAGC 1 cut(s) 2809
NlaIV GGNNCC 6 cut(s) 271, 393, 538, 1302, 2092, 2751
NmuCI GTSAC 4 cut(s) 943, 2263, 2302, 2898
NsiI ATGCAT 1 cut(s) 1789
NspI RCATGY 1 cut(s) 1976
OliI CACNNNNGTG 1 cut(s) 2309
PaqCI CACCTGC 2 cut(s) 14, 2911
PciI ACATGT 1 cut(s) 1972
PctI GAATGC 2 cut(s) 426, 2378
PdiI GCCGGC 1 cut(s) 2251
PdmI GAANNNNTTC 1 cut(s) 2644
PfeI GAWTC 6 cut(s) 293, 365, 866, 1195, 2141, 2666
PflMI CCANNNNNTGG 1 cut(s) 1224
PfoI TCCNGGA 1 cut(s) 438
PleI GAGTC 3 cut(s) 236, 1371, 1966
PpsI GAGTC 3 cut(s) 236, 1371, 1966
PscI ACATGT 1 cut(s) 1972
PshBI ATTAAT 1 cut(s) 576
Psp124BI GAGCTC 1 cut(s) 20
Psp6I CCWGG 4 cut(s) 438, 901, 2611, 2929
PspFI CCCAGC 1 cut(s) 2737
PspGI CCWGG 4 cut(s) 438, 901, 2611, 2929
PspN4I GGNNCC 6 cut(s) 271, 393, 538, 1302, 2092, 2751
PspPI GGNCC 3 cut(s) 114, 2119, 2562
PstI CTGCAG 2 cut(s) 2311, 2581
PstNI CAGNNNCTG 5 cut(s) 1840, 2440, 2708, 2921, 2936
PsuI RGATCY 6 cut(s) 120, 269, 391, 958, 1289, 2933
PvuII CAGCTG 2 cut(s) 1571, 1837
RsaI GTAC 7 cut(s) 1052, 1346, 1438, 1913, 2020, 2345, 2990
RsaNI GTAC 7 cut(s) 1051, 1345, 1437, 1912, 2019, 2344, 2989
RseI CAYNNNNRTG 2 cut(s) 2102, 2309
SacI GAGCTC 1 cut(s) 20
SaqAI TTAA 7 cut(s) 237, 348, 576, 806, 1208, 1527, 2772
Sau96I GGNCC 3 cut(s) 114, 2119, 2562
ScaI AGTACT 1 cut(s) 1438
SchI GAGTC 3 cut(s) 236, 1371, 1967
ScrFI CCNGG 4 cut(s) 440, 903, 2613, 2931
SduI GDGCHC 6 cut(s) 20, 54, 792, 1363, 2095, 2868
SfaNI GCATC 5 cut(s) 187, 561, 733, 1413, 2948
SfcI CTRYAG 5 cut(s) 327, 1801, 2307, 2577, 2892
SgrAI CRCCGGYG 1 cut(s) 2249
SinI GGWCC 1 cut(s) 2119
SmiMI CAYNNNNRTG 2 cut(s) 2102, 2309
SmlI CTYRAG 5 cut(s) 347, 500, 652, 2026, 2833
SmoI CTYRAG 5 cut(s) 347, 500, 652, 2026, 2833
SsiI CCGC 4 cut(s) 1247, 1806, 2164, 2253
SspMI CTAG 9 cut(s) 396, 1253, 1620, 1892, 2136, 2559, 2649, 2742, 2810
SstI GAGCTC 1 cut(s) 20
StyD4I CCNGG 4 cut(s) 438, 901, 2611, 2929
StyI CCWWGG 6 cut(s) 259, 395, 1393, 1897, 2086, 2946
TaaI ACNGT 8 cut(s) 249, 949, 1174, 1413, 1550, 1699, 2488, 2995
TaiI ACGT 3 cut(s) 285, 598, 1025
TaqI TCGA 3 cut(s) 484, 1025, 1978
TatI WGTACW 4 cut(s) 1050, 1436, 1911, 2988
TauI GCSGC 1 cut(s) 2167
TfiI GAWTC 6 cut(s) 293, 365, 866, 1195, 2141, 2666
Tru1I TTAA 7 cut(s) 237, 348, 576, 806, 1208, 1527, 2772
Tru9I TTAA 7 cut(s) 237, 348, 576, 806, 1208, 1527, 2772
TseFI GTSAC 4 cut(s) 943, 2263, 2302, 2898
Tsp45I GTSAC 4 cut(s) 943, 2263, 2302, 2898
TspGWI ACGGA 2 cut(s) 1332, 2891
Van91I CCANNNNNTGG 1 cut(s) 1224
Vha464I CTTAAG 1 cut(s) 347
VpaK11BI GGWCC 1 cut(s) 2119
VspI ATTAAT 1 cut(s) 576
XapI RAATTY 4 cut(s) 1005, 1232, 2004, 2238
XceI RCATGY 1 cut(s) 1976
XcmI CCANNNNNNNNNTGG 1 cut(s) 2212
XmaJI CCTAGG 1 cut(s) 395
XmiI GTMKAC 2 cut(s) 31, 1541
XmnI GAANNNNTTC 1 cut(s) 2644
XspI CTAG 9 cut(s) 396, 1253, 1620, 1892, 2136, 2559, 2649, 2742, 2810
ZraI GACGTC 1 cut(s) 1023
ZrmI AGTACT 1 cut(s) 1438
Zsp2I ATGCAT 1 cut(s) 1789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.