Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0005214

Physical Location & Seq

Genomic Coordinates Forward (+)

15756121 .. 15764398

Gene Structure 8278 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0100800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2586 bp

ATGAAATGCGATCTTCTTTATTCCGCCGATTTATTCTTTGCTTCGTTTGCTACCAAAAGCAGCAGTTGCTTTCATCTCTTTTTCGCTTCCAGATCTTGTGGAGTGCTGAAGTTGCATACTTCAATGGTAAAACTGAGGGCTATGGAGTTTTGGTATGCCGTTTTCGTATTGTTTTCCCTCTTCATTATTGGGAAAGCCGATGTTTATATTGTGACTGTCGAAGGAGAGCCTATTATAAGTTATAGAGGTGATGTTGATGGTTTTGAAGCCACTGCTGTGGAGTCTGATGAAAAGATCGACACCACTAGTGAATCAGTCACGTCCTATGCTCGACACCTTGAGAATAAACATGATATGCTTCTTGGAATGCTGTTTGAGCAAGGGACCTACAAGAAACTCTACAGCTATCAGCATCTTATAAATGGCTTTGCAGTTCATATTTCTCCCGAGCAGGCAGAAAGACTAATGCGTGCTCCGGGTGTGAAATCCGTGGAGAGAGATTGGAAGGTCCGGAGGCTTACAACTCACACACCACAGTTTTTAGGGCTTCCAACTGGAGTATGGCCAACAGGAGGTGGCTTTGATAGGGCTGGAGAAAATATTGTGATAGGGTTTGTGGACTCGGGGATTTACCCTCATCATCCAAGCTTTGCAAGCCACAGTACTGATCCTTACGGGCCTGTTCCCAAGTACAGAGGTACATGTGAAGTTGACCCAGACACCAAGAAGAGCTTCTGTAACGGAAAGATTATTGGAGCCCACCATTTCGCCAAAGCTGCAATAGCAGCTGGGGTGTTTAATCCAGTTATTGATTTCGCCTCTCCTATGGATGGTGATGGACATGGAAGTCACACTGCAGCTATTGCAGCTGGAAACAATGGAATTCCTGTCAGAATGCATGGCCATGAATTTGGCAAAGCAAGTGGGATGGCTCCCCGTGCCAGAATTGCTGTATATAAAGCTCTTTACAGGCTCTTTGGAGGGTTTGTAGCAGATGTAGTAGCCGCAATTGATCAGGCTGTTTATGATGGAGTGGATATACTGAGCCTTTCTGTGGGGCCAAACAGTCCTCCAGCTACCACCAAGACCACTTATTTGAACCCGTTTGATGCCACACTTCTTTCAGCTGTGAAAGCGGGTGTATTTGTTGCACAGGCAGCTGGAAATGGAGGACCTTTTCCAAAAACTTTGGTTTCTTATAGCCCTTGGATAGCTTCTGTTGCTGCTGCCATAGATGACCGGAGATACAAAAACCATTTCACGCTTGGGAATGGAAAAATATTACCTGGACTTGGGTTGTCACCATCTACACATCCAAATCGAACGTACACACTGATTGCTGCAAATGATGTGCTTTTGGATTCTTCAGTAGTGAAGTATAGCCCCTCAGACTGCCAGAGACCAGAAGTTTTAAACAAGAACTTGGTTGCGGGGAATATTCTTCTTTGTGGCTATTCGTTCAATTTTGTTGCTGGCTCTGCATCAATCAAGAAAGTCTCGGAAACAGCTAAAAGTCTTGGTGCAATTGGCTTTGTTCTTGCTGTGGAAAATGTTTCCCCAGGAACCAAATTTGATCCTGTTCCTTCTGGAATTCCTGGGATTGTAATCACTGATGTTAAGAAGTCAATGGATCTTATAGATTACTACAACATCTCCACATCAAGAGATTGGACTGGTCGAGTTAAGAGTTTCAAAGCTATAGGTAGCATTGGGGATGGTTTGATGCCTATACTCCACAAATCAGCACCCCAGGTGGCAATATTCTCTGCTCGAGGACCCAATATTAAAGATTTCAGCTTCCAAGATGCGGATCTTCTCAAACCAGATATTCTAGCTCCTGGTTCTCTGATTTGGGCTGCCTGGTCCCCTAATGGAACTGATGAGCCTGATTATGTTGGGGAGGGATTTGCCATGATTTCTGGAACAAGTATGGCTGCACCGCATATAGCAGGAATAGCTGCTCTTATAAAGCAGAAGCACCCTCATTGGAGCCCTGCTGCCATCAAGTCATCCTTGATGACAACATCAACAACTATAGACCGGGCTGGAAGGCCTCTCCAGGCACAACAGACTTCCGAAACACAAGGCATTAAGTTTGTGAGTGCTACTCCTTTTGATTATGGTAGTGGCCATGTTGATCCAAGGGCTGCTCTAGATCCTGGACTAATCTTTGACGTGGGTTTTGAGGATTACGTGGGCTTCTTGTGTACAACACCTGGTATTGATGCCCATGAGATAAAGAAATACACAAACTCCCCCTGCAATTACACCATGGGCCACCCATCAAATTTCAACTCTCCGTCAATCACAGTAGCTCATCTTGTAGGAAGTCGTACAGTTACTCGCACAGTGACAAATGTTGCTCAAGAAGAAACCTATGTGATCACAGCCAGAATGGCTCCAGCAATTGCCATTAGTGTCAGCCCTCCAGCAATGACTCTGAAACCTGGTGCTTCTCGAAAGTTCTCTGTGAGTCTCACGGCTCGACGTTTGACTGGAACCTACAGTTTTGGAGAGGTTCTGTTGAAAGGTAGCCGGGGGCACAAGGTTAGGATCCCGGTGGTAGCTATGGGTTACCGACGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016020 GO:0016787 GO:0019538 GO:0030163 GO:0031224 GO:0031225 GO:0031226 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

861

Amino Acids

92.49

Weight (kDa)

8.8

Isoelectric Point (pI)

29.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	69 - 171	3.8e-15	Peptidase inhibitor I9
Peptidase_S8	PF00082	198 - 684	4.4e-41	Subtilase family
fn3_5	PF06280	759 - 855	1.6e-16	Fn3-like domain
fn3_6	PF17766	763 - 855	3.5e-18	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005214)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05840
fragaria_vesca	FvH4_4g12250 FvH4_4g12250 FvH4_4g12250
malus_domestica	MD04G1028200.v1.1
prunus_persica	Prupe.1G177600_v2.0.a1 Prupe.1G177600_v2.0.a1 Prupe.1G177600_v2.0.a1
pyrus_communis	pycom04g02480 pycom13g29440 pycom13g29450
rosa_chinensis	RchiOBHm_Chr4g0410011 RchiOBHm_Chr4g0410051
rosa_laevigata	RLG00000008506
rosa_multiflora	Rmu_sc0000023.1_g000006 Rmu_sc0019088.1_g000003 Rmu_sc0026249.1_g000001 Rmu_ssc0000186.1_g000008
rosa_roxburghii	Rroxscaffold_5G00354520 Rroxscaffold_5G00354580
rosa_rugosa	Rorug04G0100700 Rorug04G0100800
rosa_samantha	Rh4AG159000 Rh4BG158300 Rh4BG172300 Rh4CG170300 Rh4DG154100 Rh6BG295000
rosa_wichuraiana	Rw4G013170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	236, 419, 1967
AasI	GACNNNNNNGTC	1 cut(s)	846
AccIII	TCCGGA	1 cut(s)	510
AciI	CCGC	6 cut(s)	24, 1005, 1136, 1430, 1808, 1940
AclWI	GGATC	8 cut(s)	662, 1568, 1638, 1818, 2132, 2150, 2548, 2561
AcoI	YGGCCR	3 cut(s)	563, 901, 2128
AcsI	RAATTY	5 cut(s)	882, 908, 1568, 1590, 2287
AcuI	CTGAAG	2 cut(s)	128, 1350
AfaI	GTAC	6 cut(s)	664, 692, 700, 1328, 2209, 2335
AfiI	CCNNNNNNNGG	5 cut(s)	572, 830, 1054, 1292, 1807
AflIII	ACRYGT	1 cut(s)	701
AgsI	TTSAA	7 cut(s)	123, 266, 1099, 1462, 1693, 2293, 2527
AhlI	ACTAGT	1 cut(s)	305
AjiI	CACGTC	2 cut(s)	321, 2176
AjuI	GAANNNNNNNTTGG	2 cut(s)	716, 748
AleI	CACNNNNGTG	1 cut(s)	275
Alw21I	GWGCWC	1 cut(s)	475
Alw26I	GTCTC	3 cut(s)	1393, 1501, 2480
AlwI	GGATC	8 cut(s)	662, 1568, 1638, 1818, 2132, 2150, 2548, 2561
Ama87I	CYCGRG	3 cut(s)	446, 622, 1770
Aor13HI	TCCGGA	1 cut(s)	510
AoxI	GGCC	7 cut(s)	563, 677, 901, 1058, 2051, 2128, 2275
ApoI	RAATTY	5 cut(s)	882, 908, 1568, 1590, 2287
ArsI	GACNNNNNNTTYG	4 cut(s)	1078, 1110, 2165, 2197
Asp700I	GAANNNNTTC	1 cut(s)	731
AspS9I	GGNCC	8 cut(s)	384, 508, 677, 1058, 1172, 1775, 1863, 2275
AsuC2I	CCSGG	4 cut(s)	477, 2042, 2537, 2558
AsuHPI	GGTGA	3 cut(s)	260, 845, 1293
AvaI	CYCGRG	3 cut(s)	446, 622, 1770
AvaII	GGWCC	5 cut(s)	384, 508, 1172, 1775, 1863
BaeGI	GKGCMC	1 cut(s)	2544
BalI	TGGCCA	3 cut(s)	565, 903, 2130
BamHI	GGATCC	1 cut(s)	2553
BanII	GRGCYC	2 cut(s)	760, 1994
Bbv12I	GWGCWC	1 cut(s)	475
BccI	CCATC	9 cut(s)	251, 824, 830, 922, 1022, 1312, 1709, 2009, 2290
BceAI	ACGGC	2 cut(s)	143, 2496
BclI	TGATCA	2 cut(s)	1012, 2382
BcnI	CCSGG	4 cut(s)	477, 2042, 2537, 2558
BcoDI	GTCTC	3 cut(s)	1393, 1501, 2480
BcuI	ACTAGT	1 cut(s)	305
BfaI	CTAG	3 cut(s)	306, 1832, 2153
BfmI	CTRYAG	5 cut(s)	400, 855, 1698, 2034, 2503
BglI	GCCNNNNNGGC	1 cut(s)	2396
BglII	AGATCT	1 cut(s)	92
BmcAI	AGTACT	1 cut(s)	664
Bme18I	GGWCC	5 cut(s)	384, 508, 1172, 1775, 1863
BmeT110I	CYCGRG	3 cut(s)	446, 622, 1770
BmgBI	CACGTC	2 cut(s)	321, 2176
BmgT120I	GGNCC	8 cut(s)	384, 508, 677, 1058, 1172, 1775, 1863, 2275
BmsI	GCATC	6 cut(s)	421, 1099, 1490, 1713, 1795, 2215
BplI	GAGNNNNNCTC	2 cut(s)	2092, 2124
BpmI	CTGGAG	6 cut(s)	576, 612, 1056, 2042, 2385, 2412
BpuEI	CTTGAG	2 cut(s)	359, 2349
BpuMI	CCSGG	4 cut(s)	477, 2042, 2537, 2558
BsaAI	YACGTR	1 cut(s)	2194
BsaBI	GATNNNNATC	2 cut(s)	1604, 1809
BsaI	GGTCTC	1 cut(s)	1393
BsaJI	CCNNGG	8 cut(s)	489, 1205, 1558, 1595, 1749, 2141, 2271, 2536
BsaWI	WCCGGW	2 cut(s)	510, 1239
BsaXI	ACNNNNNCTCC	8 cut(s)	137, 167, 972, 1002, 1637, 1667, 2237, 2267
Bsc4I	CCNNNNNNNGG	5 cut(s)	572, 830, 1054, 1292, 1807
Bse1I	ACTGG	4 cut(s)	559, 803, 1678, 2500
Bse3DI	GCAATG	1 cut(s)	2439
Bse8I	GATNNNNATC	2 cut(s)	1604, 1809
BseAI	TCCGGA	1 cut(s)	510
BseDI	CCNNGG	8 cut(s)	489, 1205, 1558, 1595, 1749, 2141, 2271, 2536
BseGI	GGATG	6 cut(s)	640, 835, 933, 1312, 1720, 2009
BseJI	GATNNNNATC	2 cut(s)	1604, 1809
BseLI	CCNNNNNNNGG	5 cut(s)	572, 830, 1054, 1292, 1807
BseMI	GCAATG	1 cut(s)	2439
BseMII	CTCAG	3 cut(s)	125, 1034, 1401
BseNI	ACTGG	4 cut(s)	559, 803, 1678, 2500
BseSI	GKGCMC	1 cut(s)	2544
BseYI	CCCAGC	1 cut(s)	788
BsgI	GTGCAG	1 cut(s)	1920
BshFI	GGCC	7 cut(s)	565, 679, 903, 1060, 2053, 2130, 2277
BsiHKAI	GWGCWC	1 cut(s)	475
BsiHKCI	CYCGRG	3 cut(s)	446, 622, 1770
BsiSI	CCGG	6 cut(s)	476, 511, 1240, 2041, 2536, 2558
BslFI	GGGAC	2 cut(s)	397, 1849
BslI	CCNNNNNNNGG	5 cut(s)	572, 830, 1054, 1292, 1807
BsmAI	GTCTC	3 cut(s)	1393, 1501, 2480
BsmFI	GGGAC	2 cut(s)	397, 1849
BsmI	GAATGC	2 cut(s)	372, 900
BsnI	GGCC	7 cut(s)	565, 679, 903, 1060, 2053, 2130, 2277
Bso31I	GGTCTC	1 cut(s)	1393
BsoBI	CYCGRG	3 cut(s)	446, 622, 1770
Bsp1286I	GDGCHC	4 cut(s)	475, 760, 1994, 2544
Bsp13I	TCCGGA	1 cut(s)	510
Bsp1407I	TGTACA	1 cut(s)	2207
Bsp19I	CCATGG	1 cut(s)	2271
BspACI	CCGC	6 cut(s)	24, 1005, 1136, 1430, 1808, 1940
BspANI	GGCC	7 cut(s)	565, 679, 903, 1060, 2053, 2130, 2277
BspCNI	CTCAG	3 cut(s)	126, 1035, 1400
BspEI	TCCGGA	1 cut(s)	510
BspMAI	CTGCAG	1 cut(s)	859
BspPI	GGATC	8 cut(s)	662, 1568, 1638, 1818, 2132, 2150, 2548, 2561
BspQI	GCTCTTC	1 cut(s)	722
BspTNI	GGTCTC	1 cut(s)	1393
BsrDI	GCAATG	1 cut(s)	2439
BsrGI	TGTACA	1 cut(s)	2207
BsrI	ACTGG	4 cut(s)	559, 803, 1678, 2500
BssECI	CCNNGG	8 cut(s)	489, 1205, 1558, 1595, 1749, 2141, 2271, 2536
BssT1I	CCWWGG	3 cut(s)	1205, 2141, 2271
Bst4CI	ACNGT	9 cut(s)	217, 537, 662, 1067, 2311, 2338, 2350, 2507, 2583
Bst6I	CTCTTC	2 cut(s)	185, 722
BstAPI	GCANNNNNTGC	2 cut(s)	66, 863
BstAUI	TGTACA	1 cut(s)	2207
BstBAI	YACGTR	1 cut(s)	2194
BstC8I	GCNNGC	4 cut(s)	453, 471, 655, 1474
BstDEI	CTNAG	3 cut(s)	134, 1043, 1387
BstDSI	CCRYGG	2 cut(s)	489, 2271
BstEII	GGTNACC	1 cut(s)	2573
BstF5I	GGATG	6 cut(s)	640, 835, 933, 1312, 1720, 2009
BstMAI	GTCTC	3 cut(s)	1393, 1501, 2480
BstNSI	RCATGY	1 cut(s)	705
BstPI	GGTNACC	1 cut(s)	2573
BstSFI	CTRYAG	5 cut(s)	400, 855, 1698, 2034, 2503
BstSLI	GKGCMC	1 cut(s)	2544
BstX2I	RGATCY	5 cut(s)	92, 1630, 1810, 2155, 2553
BstXI	CCANNNNNNTGG	2 cut(s)	277, 911
BstYI	RGATCY	5 cut(s)	92, 1630, 1810, 2155, 2553
BsuRI	GGCC	7 cut(s)	565, 679, 903, 1060, 2053, 2130, 2277
BtgI	CCRYGG	2 cut(s)	489, 2271
BtrI	CACGTC	2 cut(s)	321, 2176
BtsCI	GGATG	6 cut(s)	640, 835, 933, 1312, 1720, 2009
BtsI	GCAGTG	2 cut(s)	270, 852
BtsIMutI	CAGTG	5 cut(s)	270, 852, 1331, 1608, 2355
Cac8I	GCNNGC	4 cut(s)	453, 471, 655, 1474
Cfr13I	GGNCC	8 cut(s)	384, 508, 677, 1058, 1172, 1775, 1863, 2275
CsiI	ACCWGGT	2 cut(s)	2215, 2446
Csp6I	GTAC	6 cut(s)	663, 691, 699, 1327, 2208, 2334
CspCI	CAANNNNNGTGG	2 cut(s)	904, 939
CviAII	CATG	9 cut(s)	350, 702, 842, 899, 905, 1912, 2132, 2231, 2272
CviQI	GTAC	6 cut(s)	663, 691, 699, 1327, 2208, 2334
DdeI	CTNAG	3 cut(s)	134, 1043, 1387
DraI	TTTAAA	1 cut(s)	1413
DrdI	GACNNNNNNGTC	1 cut(s)	846
DseDI	GACNNNNNNGTC	1 cut(s)	846
EaeI	YGGCCR	3 cut(s)	563, 901, 2128
Eam1104I	CTCTTC	2 cut(s)	185, 722
EarI	CTCTTC	2 cut(s)	185, 722
EciI	GGCGGA	1 cut(s)	13
Eco130I	CCWWGG	3 cut(s)	1205, 2141, 2271
Eco147I	AGGCCT	1 cut(s)	2053
Eco24I	GRGCYC	2 cut(s)	760, 1994
Eco31I	GGTCTC	1 cut(s)	1393
Eco47I	GGWCC	5 cut(s)	384, 508, 1172, 1775, 1863
Eco57I	CTGAAG	2 cut(s)	128, 1350
Eco88I	CYCGRG	3 cut(s)	446, 622, 1770
Eco91I	GGTNACC	1 cut(s)	2573
EcoO109I	RGGNCCY	3 cut(s)	384, 1172, 1775
EcoO65I	GGTNACC	1 cut(s)	2573
EcoRI	GAATTC	2 cut(s)	882, 1590
EcoT14I	CCWWGG	3 cut(s)	1205, 2141, 2271
EcoT22I	ATGCAT	1 cut(s)	900
EcoT38I	GRGCYC	2 cut(s)	760, 1994
ErhI	CCWWGG	3 cut(s)	1205, 2141, 2271
FaeI	CATG	9 cut(s)	353, 705, 845, 902, 908, 1915, 2135, 2234, 2275
FalI	AAGNNNNNCTT	4 cut(s)	716, 748, 1997, 2029
FaqI	GGGAC	2 cut(s)	397, 1849
FatI	CATG	9 cut(s)	349, 701, 841, 898, 904, 1911, 2131, 2230, 2271
FauI	CCCGC	2 cut(s)	1129, 1423
FbaI	TGATCA	2 cut(s)	1012, 2382
FokI	GGATG	6 cut(s)	627, 842, 940, 1299, 1727, 1996
FriOI	GRGCYC	2 cut(s)	760, 1994
FspBI	CTAG	3 cut(s)	306, 1832, 2153
GsaI	CCCAGC	1 cut(s)	792
GsuI	CTGGAG	6 cut(s)	576, 612, 1056, 2042, 2385, 2412
HaeIII	GGCC	7 cut(s)	565, 679, 903, 1060, 2053, 2130, 2277
HapII	CCGG	6 cut(s)	476, 511, 1240, 2041, 2536, 2558
Hin1II	CATG	9 cut(s)	353, 705, 845, 902, 908, 1915, 2135, 2234, 2275
HincII	GTYRAC	1 cut(s)	712
HindII	GTYRAC	1 cut(s)	712
HindIII	AAGCTT	1 cut(s)	646
HinfI	GANTC	6 cut(s)	281, 311, 620, 1361, 2437, 2473
HpaII	CCGG	6 cut(s)	476, 511, 1240, 2041, 2536, 2558
HphI	GGTGA	3 cut(s)	260, 845, 1293
Hpy166II	GTNNAC	4 cut(s)	619, 712, 1329, 2208
Hpy188I	TCNGA	7 cut(s)	286, 893, 1390, 1501, 1848, 2077, 2442
Hpy8I	GTNNAC	4 cut(s)	619, 712, 1329, 2208
Hpy99I	CGWCG	2 cut(s)	2490, 2583
HpyAV	CCTTC	4 cut(s)	215, 499, 1593, 2043
HpyCH4III	ACNGT	9 cut(s)	217, 537, 662, 1067, 2311, 2338, 2350, 2507, 2583
HpyCH4IV	ACGT	5 cut(s)	320, 1325, 2175, 2193, 2488
HpyF3I	CTNAG	3 cut(s)	134, 1043, 1387
HpySE526I	ACGT	5 cut(s)	320, 1325, 2175, 2193, 2488
Hsp92II	CATG	9 cut(s)	353, 705, 845, 902, 908, 1915, 2135, 2234, 2275
Kpn2I	TCCGGA	1 cut(s)	510
Ksp22I	TGATCA	2 cut(s)	1012, 2382
LguI	GCTCTTC	1 cut(s)	722
LmnI	GCTCC	6 cut(s)	478, 755, 937, 1840, 1989, 2404
LweI	GCATC	6 cut(s)	421, 1099, 1490, 1713, 1795, 2215
MabI	ACCWGGT	2 cut(s)	2215, 2446
MaeI	CTAG	3 cut(s)	306, 1832, 2153
MaeII	ACGT	5 cut(s)	320, 1325, 2175, 2193, 2488
MaeIII	GTNAC	8 cut(s)	211, 316, 737, 848, 1299, 2338, 2350, 2573
MboII	GAAGA	7 cut(s)	5, 172, 739, 1356, 1433, 1805, 2381
MfeI	CAATTG	3 cut(s)	1008, 1524, 2406
MflI	RGATCY	5 cut(s)	92, 1630, 1810, 2155, 2553
MhlI	GDGCHC	4 cut(s)	475, 760, 1994, 2544
MlsI	TGGCCA	3 cut(s)	565, 903, 2130
MluNI	TGGCCA	3 cut(s)	565, 903, 2130
MlyI	GAGTC	4 cut(s)	290, 614, 2431, 2482
MmeI	TCCRAC	1 cut(s)	575
Mox20I	TGGCCA	3 cut(s)	565, 903, 2130
Mph1103I	ATGCAT	1 cut(s)	900
MroI	TCCGGA	1 cut(s)	510
MroXI	GAANNNNTTC	1 cut(s)	731
MscI	TGGCCA	3 cut(s)	565, 903, 2130
MseI	TTAA	6 cut(s)	798, 1412, 1617, 1683, 1785, 2091
MslI	CAYNNNNRTG	2 cut(s)	275, 903
Msp20I	TGGCCA	3 cut(s)	565, 903, 2130
MspA1I	CMGCKG	4 cut(s)	788, 869, 1127, 1160
MspI	CCGG	6 cut(s)	476, 511, 1240, 2041, 2536, 2558
MunI	CAATTG	3 cut(s)	1008, 1524, 2406
Mva1269I	GAATGC	2 cut(s)	372, 900
NciI	CCSGG	4 cut(s)	477, 2042, 2537, 2558
NcoI	CCATGG	1 cut(s)	2271
NlaIII	CATG	9 cut(s)	353, 705, 845, 902, 908, 1915, 2135, 2234, 2275
NmuCI	GTSAC	5 cut(s)	211, 316, 848, 1299, 2350
NsiI	ATGCAT	1 cut(s)	900
NspI	RCATGY	1 cut(s)	705
OliI	CACNNNNGTG	1 cut(s)	275
PaeR7I	CTCGAG	1 cut(s)	1770
PceI	AGGCCT	1 cut(s)	2053
PciI	ACATGT	1 cut(s)	701
PciSI	GCTCTTC	1 cut(s)	722
PctI	GAATGC	2 cut(s)	372, 900
PdmI	GAANNNNTTC	1 cut(s)	731
PfeI	GAWTC	2 cut(s)	311, 1361
PfoI	TCCNGGA	1 cut(s)	2158
PleI	GAGTC	4 cut(s)	289, 614, 2431, 2481
PpsI	GAGTC	4 cut(s)	289, 614, 2431, 2481
Ppu21I	YACGTR	1 cut(s)	2194
PpuMI	RGGWCCY	3 cut(s)	384, 1172, 1775
PscI	ACATGT	1 cut(s)	701
PsiI	TTATAA	3 cut(s)	236, 419, 1967
Psp5II	RGGWCCY	3 cut(s)	384, 1172, 1775
PspEI	GGTNACC	1 cut(s)	2573
PspFI	CCCAGC	1 cut(s)	788
PspPI	GGNCC	8 cut(s)	384, 508, 677, 1058, 1172, 1775, 1863, 2275
PspPPI	RGGWCCY	3 cut(s)	384, 1172, 1775
PspXI	VCTCGAGB	1 cut(s)	1770
PstI	CTGCAG	1 cut(s)	859
PsuI	RGATCY	5 cut(s)	92, 1630, 1810, 2155, 2553
PvuII	CAGCTG	4 cut(s)	788, 869, 1127, 1160
RsaI	GTAC	6 cut(s)	664, 692, 700, 1328, 2209, 2335
RsaNI	GTAC	6 cut(s)	663, 691, 699, 1327, 2208, 2334
RseI	CAYNNNNRTG	2 cut(s)	275, 903
SapI	GCTCTTC	1 cut(s)	722
SaqAI	TTAA	6 cut(s)	798, 1412, 1617, 1683, 1785, 2091
Sau96I	GGNCC	8 cut(s)	384, 508, 677, 1058, 1172, 1775, 1863, 2275
ScaI	AGTACT	1 cut(s)	664
SchI	GAGTC	4 cut(s)	290, 614, 2431, 2482
SduI	GDGCHC	4 cut(s)	475, 760, 1994, 2544
SexAI	ACCWGGT	2 cut(s)	2215, 2446
SfaNI	GCATC	6 cut(s)	421, 1099, 1490, 1713, 1795, 2215
SfcI	CTRYAG	5 cut(s)	400, 855, 1698, 2034, 2503
Sfr274I	CTCGAG	1 cut(s)	1770
SinI	GGWCC	5 cut(s)	384, 508, 1172, 1775, 1863
SlaI	CTCGAG	1 cut(s)	1770
SmiMI	CAYNNNNRTG	2 cut(s)	275, 903
SmlI	CTYRAG	3 cut(s)	338, 1770, 2364
SmoI	CTYRAG	3 cut(s)	338, 1770, 2364
SpeI	ACTAGT	1 cut(s)	305
SseBI	AGGCCT	1 cut(s)	2053
SsiI	CCGC	6 cut(s)	24, 1005, 1136, 1430, 1808, 1940
SspI	AATATT	5 cut(s)	601, 1281, 1438, 1761, 1783
SspMI	CTAG	3 cut(s)	306, 1832, 2153
StuI	AGGCCT	1 cut(s)	2053
StyI	CCWWGG	3 cut(s)	1205, 2141, 2271
TaaI	ACNGT	9 cut(s)	217, 537, 662, 1067, 2311, 2338, 2350, 2507, 2583
TaiI	ACGT	5 cut(s)	323, 1328, 2178, 2196, 2491
TaqI	TCGA	8 cut(s)	219, 297, 331, 1321, 1678, 1771, 2458, 2485
TatI	WGTACW	3 cut(s)	662, 690, 2207
TauI	GCSGC	1 cut(s)	1007
TfiI	GAWTC	2 cut(s)	311, 1361
Tru1I	TTAA	6 cut(s)	798, 1412, 1617, 1683, 1785, 2091
Tru9I	TTAA	6 cut(s)	798, 1412, 1617, 1683, 1785, 2091
TscAI	CASTG	5 cut(s)	277, 859, 1338, 1615, 2355
TseFI	GTSAC	5 cut(s)	211, 316, 848, 1299, 2350
Tsp45I	GTSAC	5 cut(s)	211, 316, 848, 1299, 2350
TspDTI	ATGAA	6 cut(s)	17, 62, 172, 303, 425, 921
TspGWI	ACGGA	3 cut(s)	478, 756, 2289
TspRI	CASTG	5 cut(s)	277, 859, 1338, 1615, 2355
VpaK11BI	GGWCC	5 cut(s)	384, 508, 1172, 1775, 1863
XapI	RAATTY	5 cut(s)	882, 908, 1568, 1590, 2287
XbaI	TCTAGA	1 cut(s)	2152
XceI	RCATGY	1 cut(s)	705
XcmI	CCANNNNNNNNNTGG	2 cut(s)	558, 1262
XhoI	CTCGAG	1 cut(s)	1770
XmnI	GAANNNNTTC	1 cut(s)	731
XspI	CTAG	3 cut(s)	306, 1832, 2153
ZrmI	AGTACT	1 cut(s)	664
Zsp2I	ATGCAT	1 cut(s)	900

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.