Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0005214

Physical Location & Seq

Genomic Coordinates Reverse (-)

30720421 .. 30727146

Gene Structure 6726 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG154100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1476 bp

ATGAAAAGAGTCGCGCTCACTCTCACAACGTCGTGCCGGAGCTTTCCTCTTCTCTTCCTCCTCCTGATTTCCACCAACATCACCGCCGGCGTCGCTCTCGACAACGCCGTCTTGAGCGTCAAGTACAAATACGCCGGCCGGGACCGCACTCTCAGCGCCCTAAAAGCTCACGACACCAAACGCACTCTCCGATTTCTCGCCGGCGTCGATCTCCCTCTCGGCGGCTCGGGCCGCCCTGACGCCGTCGGATTATACTATGCTCAAATTGGAATAGGAACACCTCCTAGAGACTACTATGTCCAAGTTGATACTGGAAGTGATATTATGTGGGTCAACTGTATTCAATGCAAGGATTGCCCTCAAAGAAGCTCACTTGGTTTTGAGCTATCACTATATGATATCAAGCAGTCTTCCACTGGTAAACTGATTCCTTGTGATCAAGAGTTTTGCATGGCGGTGAATAATGGTCCATTGGCTGGATGTACGGCCAATATGTCATGTCCTTATTTACAAATTTACGGAGACGGCACCTCCACTGCTGGTTACTTTGTCAAAGATATTGTGTTGTATGACCAAGTGTCGGGTGACCTCAAGACTAGCTCTTCCAATGGGAGCGTCATTTTTGGGTGTGGTGCTACACAATCTGGTGATATAGGCTCATCTGGTGAAGAAGCACTTGATGGAATTCTTGGCTTTGGAAAGTCCAATTCATCCATAATTTCACAGCTAGCTTCATCAGGAAAAGTGAAGAAGATGTTTGCTCACTGCTTAGATGGAAAGAATGGAGGCGGTATCTTTGCTATTGGGCGTGTTGTGCAGCCGAAAGTTAACATGACTCCATTGGTACCAAACCAGCCGCACTACAATGTCAATATGAAGGCAGTTCAAGTTGGCCATGCTTTCCTAAATATTTCTACAGATGTATTTGAAGCGGGAGATAGAAAAGGGACTATAATTGACAGCGGTACAACTTTGGCCTATCTTCCAGACGTGGTGTACGAGCCCTTAGTAAGTAAGATCTTATCTCAGCAGCCTGATTTGAAAATTCACACTCTTCGTGGCGAGTATACATGCTTTGAGTACTCGGGAAGTGTTGATGATGGATTTCCTGCAGTCACCTTTTATTTTGAAAATTCACTTTCTTTGAAGGTTTATCCACATGACTACTTGTTCCCCTCTGAAGGTTTTTGGTGCATTGGTTGGCAAAACAGTGGGTTGCAATCCAGGGATACTAAGAACTTGACCCTTTTGGGAGATTTGGTACTTTCGAATAAGCTAGTGTTGTATGATCTTGAAAATCAAGTCATTGGATGGACTGAGTATAACTGCTCATCAAGTATCAAAGTACAGGATGAACAGAGTGGAACAGTACATTTAGTAGGTTCCCACTACATCCCTTCTTCTGCTTGCCATTTGAATCACCAATGGACTATAAACTTCTTCCTAACGCTGCTGCTGTACAGTTTACTTTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016020 GO:0016787 GO:0019538 GO:0030163 GO:0031224 GO:0031225 GO:0031226 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

491

Amino Acids

53.46

Weight (kDa)

5.93

Isoelectric Point (pI)

37.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	85 - 269	1.1e-37	Xylanase inhibitor N-terminal
Asp	PF00026	85 - 141	1.6e-08	Eukaryotic aspartyl protease
Asp	PF00026	173 - 439	5.5e-13	Eukaryotic aspartyl protease
TAXi_C	PF14541	287 - 439	1.2e-17	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005214)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05840
fragaria_vesca	FvH4_4g12250 FvH4_4g12250 FvH4_4g12250
malus_domestica	MD04G1028200.v1.1
prunus_persica	Prupe.1G177600_v2.0.a1 Prupe.1G177600_v2.0.a1 Prupe.1G177600_v2.0.a1
pyrus_communis	pycom04g02480 pycom13g29440 pycom13g29450
rosa_chinensis	RchiOBHm_Chr4g0410011 RchiOBHm_Chr4g0410051
rosa_laevigata	RLG00000008506
rosa_multiflora	Rmu_sc0000023.1_g000006 Rmu_sc0019088.1_g000003 Rmu_sc0026249.1_g000001 Rmu_ssc0000186.1_g000008
rosa_roxburghii	Rroxscaffold_5G00354520 Rroxscaffold_5G00354580
rosa_rugosa	Rorug04G0100700 Rorug04G0100800
rosa_samantha	Rh4AG159000 Rh4BG158300 Rh4BG172300 Rh4CG170300 Rh4DG154100 Rh6BG295000
rosa_wichuraiana	Rw4G013170

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	107, 296
Acc65I	GGTACC	1 cut(s)	844
AccB1I	GGYRCC	2 cut(s)	527, 844
AccB7I	CCANNNNNTGG	1 cut(s)	476
AccI	GTMKAC	1 cut(s)	1067
AccII	CGCG	1 cut(s)	14
AciI	CCGC	9 cut(s)	84, 145, 222, 232, 455, 789, 857, 932, 963
AcoI	YGGCCR	3 cut(s)	136, 486, 892
AcsI	RAATTY	4 cut(s)	513, 684, 1044, 1132
AcuI	CTGAAG	1 cut(s)	1200
AcyI	GRCGYC	3 cut(s)	90, 204, 240
AfiI	CCNNNNNNNGG	4 cut(s)	221, 476, 580, 1181
AgsI	TTSAA	8 cut(s)	344, 887, 929, 1042, 1130, 1147, 1295, 1417
AhdI	GACNNNNNGTC	1 cut(s)	577
AjiI	CACGTC	1 cut(s)	991
AjnI	CCWGG	1 cut(s)	1223
AluBI	AGCT	8 cut(s)	42, 167, 369, 385, 600, 727, 731, 1276
AluI	AGCT	8 cut(s)	42, 167, 369, 385, 600, 727, 731, 1276
Alw26I	GTCTC	2 cut(s)	282, 516
Ama87I	CYCGRG	2 cut(s)	226, 1084
AoxI	GGCC	5 cut(s)	136, 229, 486, 892, 975
ApeKI	GCWGC	4 cut(s)	817, 1030, 1450, 1453
ApoI	RAATTY	4 cut(s)	513, 684, 1044, 1132
Asp718I	GGTACC	1 cut(s)	844
AspLEI	GCGC	2 cut(s)	16, 158
AspS9I	GGNCC	3 cut(s)	142, 229, 467
AsuC2I	CCSGG	1 cut(s)	140
AsuHPI	GGTGA	7 cut(s)	73, 469, 596, 659, 677, 1108, 1412
AsuII	TTCGAA	1 cut(s)	1268
AsuNHI	GCTAGC	1 cut(s)	727
AvaI	CYCGRG	2 cut(s)	226, 1084
AvaII	GGWCC	2 cut(s)	142, 467
BalI	TGGCCA	1 cut(s)	894
BanI	GGYRCC	2 cut(s)	527, 844
BanII	GRGCYC	1 cut(s)	1005
BbsI	GAAGAC	1 cut(s)	402
BbvI	GCAGC	4 cut(s)	829, 1042, 1437, 1440
BccI	CCATC	4 cut(s)	674, 767, 1094, 1305
BceAI	ACGGC	4 cut(s)	92, 227, 501, 541
BciT130I	CCWGG	1 cut(s)	1225
BciVI	GTATCC	1 cut(s)	1222
BclI	TGATCA	1 cut(s)	436
BcnI	CCSGG	1 cut(s)	140
BcoDI	GTCTC	2 cut(s)	282, 516
BfaI	CTAG	4 cut(s)	285, 597, 728, 1277
BfmI	CTRYAG	2 cut(s)	915, 1110
BfoI	RGCGCY	1 cut(s)	159
BfuI	GTATCC	1 cut(s)	1222
BglII	AGATCT	1 cut(s)	1017
BisI	GCNGC	7 cut(s)	223, 232, 818, 857, 1031, 1451, 1454
BlsI	GCNGC	7 cut(s)	224, 233, 819, 858, 1032, 1452, 1455
BmcAI	AGTACT	1 cut(s)	1082
Bme1390I	CCNGG	2 cut(s)	140, 1225
Bme18I	GGWCC	2 cut(s)	142, 467
BmeRI	GACNNNNNGTC	1 cut(s)	577
BmeT110I	CYCGRG	2 cut(s)	226, 1084
BmgBI	CACGTC	1 cut(s)	991
BmgT120I	GGNCC	3 cut(s)	142, 229, 467
BmiI	GGNNCC	4 cut(s)	143, 529, 846, 1384
BmrFI	CCNGG	2 cut(s)	140, 1225
BmtI	GCTAGC	1 cut(s)	731
BpiI	GAAGAC	1 cut(s)	402
BplI	GAGNNNNNCTC	3 cut(s)	32, 31, 63
Bpu14I	TTCGAA	1 cut(s)	1268
BpuEI	CTTGAG	2 cut(s)	133, 575
BpuMI	CCSGG	1 cut(s)	140
BsaHI	GRCGYC	3 cut(s)	90, 204, 240
BsaJI	CCNNGG	1 cut(s)	1224
BsaXI	ACNNNNNCTCC	6 cut(s)	171, 201, 515, 545, 1245, 1275
Bsc4I	CCNNNNNNNGG	4 cut(s)	221, 476, 580, 1181
Bse118I	RCCGGY	3 cut(s)	86, 134, 200
Bse1I	ACTGG	2 cut(s)	316, 421
BseBI	CCWGG	1 cut(s)	1225
BseDI	CCNNGG	1 cut(s)	1224
BseGI	GGATG	5 cut(s)	485, 710, 1316, 1357, 1392
BseLI	CCNNNNNNNGG	4 cut(s)	221, 476, 580, 1181
BseMII	CTCAG	3 cut(s)	166, 1040, 1308
BseNI	ACTGG	2 cut(s)	316, 421
BseRI	GAGGAG	1 cut(s)	50
BseX3I	CGGCCG	1 cut(s)	136
BseXI	GCAGC	4 cut(s)	829, 1042, 1437, 1440
BsgI	GTGCAG	1 cut(s)	836
Bsh1236I	CGCG	1 cut(s)	14
Bsh1285I	CGRYCG	1 cut(s)	139
BshFI	GGCC	5 cut(s)	138, 231, 488, 894, 977
BshNI	GGYRCC	2 cut(s)	527, 844
BsiEI	CGRYCG	1 cut(s)	139
BsiHKCI	CYCGRG	2 cut(s)	226, 1084
BsiSI	CCGG	5 cut(s)	37, 87, 135, 139, 201
BslFI	GGGAC	2 cut(s)	155, 961
BslI	CCNNNNNNNGG	4 cut(s)	221, 476, 580, 1181
BsmAI	GTCTC	2 cut(s)	282, 516
BsmBI	CGTCTC	1 cut(s)	516
BsmFI	GGGAC	2 cut(s)	155, 961
BsnI	GGCC	5 cut(s)	138, 231, 488, 894, 977
BsoBI	CYCGRG	2 cut(s)	226, 1084
Bsp119I	TTCGAA	1 cut(s)	1268
Bsp1286I	GDGCHC	1 cut(s)	1005
Bsp1407I	TGTACA	1 cut(s)	1458
Bsp143I	GATC	4 cut(s)	208, 436, 1017, 1288
BspACI	CCGC	9 cut(s)	84, 145, 222, 232, 455, 789, 857, 932, 963
BspANI	GGCC	5 cut(s)	138, 231, 488, 894, 977
BspCNI	CTCAG	3 cut(s)	165, 1039, 1309
BspFNI	CGCG	1 cut(s)	14
BspLI	GGNNCC	4 cut(s)	143, 529, 846, 1384
BspMAI	CTGCAG	1 cut(s)	1114
BspOI	GCTAGC	1 cut(s)	731
BspQI	GCTCTTC	1 cut(s)	607
BspT104I	TTCGAA	1 cut(s)	1268
BspT107I	GGYRCC	2 cut(s)	527, 844
BsrFI	RCCGGY	3 cut(s)	86, 134, 200
BsrGI	TGTACA	1 cut(s)	1458
BsrI	ACTGG	2 cut(s)	316, 421
BssAI	RCCGGY	3 cut(s)	86, 134, 200
BssECI	CCNNGG	1 cut(s)	1224
BssMI	GATC	4 cut(s)	208, 436, 1017, 1288
BssNAI	GTATAC	1 cut(s)	1068
BssNI	GRCGYC	3 cut(s)	90, 204, 240
Bst1107I	GTATAC	1 cut(s)	1068
Bst2UI	CCWGG	1 cut(s)	1225
Bst4CI	ACNGT	4 cut(s)	338, 1211, 1369, 1463
Bst6I	CTCTTC	4 cut(s)	54, 59, 607, 1059
BstACI	GRCGYC	3 cut(s)	90, 204, 240
BstAPI	GCANNNNNTGC	1 cut(s)	354
BstAUI	TGTACA	1 cut(s)	1458
BstBI	TTCGAA	1 cut(s)	1268
BstC8I	GCNNGC	5 cut(s)	88, 136, 202, 729, 1408
BstDEI	CTNAG	6 cut(s)	152, 769, 1006, 1026, 1233, 1317
BstEII	GGTNACC	1 cut(s)	584
BstF5I	GGATG	5 cut(s)	485, 710, 1316, 1357, 1392
BstFNI	CGCG	1 cut(s)	14
BstH2I	RGCGCY	1 cut(s)	159
BstHHI	GCGC	2 cut(s)	16, 158
BstKTI	GATC	4 cut(s)	211, 439, 1020, 1291
BstMAI	GTCTC	2 cut(s)	282, 516
BstMBI	GATC	4 cut(s)	208, 436, 1017, 1288
BstMCI	CGRYCG	1 cut(s)	139
BstMWI	GCNNNNNNNGC	8 cut(s)	92, 144, 153, 164, 228, 231, 354, 814
BstNI	CCWGG	1 cut(s)	1225
BstNSI	RCATGY	1 cut(s)	1074
BstPI	GGTNACC	1 cut(s)	584
BstSCI	CCNGG	2 cut(s)	138, 1223
BstSFI	CTRYAG	2 cut(s)	915, 1110
BstUI	CGCG	1 cut(s)	14
BstV1I	GCAGC	4 cut(s)	829, 1042, 1437, 1440
BstV2I	GAAGAC	1 cut(s)	402
BstX2I	RGATCY	1 cut(s)	1017
BstYI	RGATCY	1 cut(s)	1017
BstZ17I	GTATAC	1 cut(s)	1068
BstZI	CGGCCG	1 cut(s)	136
BsuI	GTATCC	1 cut(s)	1222
BsuRI	GGCC	5 cut(s)	138, 231, 488, 894, 977
BtrI	CACGTC	1 cut(s)	991
BtsCI	GGATG	5 cut(s)	485, 710, 1316, 1357, 1392
BtsI	GCAGTG	2 cut(s)	534, 763
BtsIMutI	CAGTG	4 cut(s)	414, 534, 763, 1216
Cac8I	GCNNGC	5 cut(s)	88, 136, 202, 729, 1408
CfoI	GCGC	2 cut(s)	16, 158
Cfr10I	RCCGGY	3 cut(s)	86, 134, 200
Cfr13I	GGNCC	3 cut(s)	142, 229, 467
CseI	GACGC	5 cut(s)	79, 106, 193, 248, 604
CviAII	CATG	6 cut(s)	451, 498, 832, 896, 1071, 1160
DdeI	CTNAG	6 cut(s)	152, 769, 1006, 1026, 1233, 1317
DpnI	GATC	4 cut(s)	210, 438, 1019, 1290
DpnII	GATC	4 cut(s)	208, 436, 1017, 1288
DrdI	GACNNNNNNGTC	2 cut(s)	107, 296
DriI	GACNNNNNGTC	1 cut(s)	577
DseDI	GACNNNNNNGTC	2 cut(s)	107, 296
EaeI	YGGCCR	3 cut(s)	136, 486, 892
EagI	CGGCCG	1 cut(s)	136
Eam1104I	CTCTTC	4 cut(s)	54, 59, 607, 1059
Eam1105I	GACNNNNNGTC	1 cut(s)	577
EarI	CTCTTC	4 cut(s)	54, 59, 607, 1059
EclXI	CGGCCG	1 cut(s)	136
Eco24I	GRGCYC	1 cut(s)	1005
Eco32I	GATATC	1 cut(s)	400
Eco47I	GGWCC	2 cut(s)	142, 467
Eco52I	CGGCCG	1 cut(s)	136
Eco57I	CTGAAG	1 cut(s)	1200
Eco88I	CYCGRG	2 cut(s)	226, 1084
Eco91I	GGTNACC	1 cut(s)	584
EcoO65I	GGTNACC	1 cut(s)	584
EcoRI	GAATTC	1 cut(s)	684
EcoRII	CCWGG	1 cut(s)	1223
EcoRV	GATATC	1 cut(s)	400
EcoT38I	GRGCYC	1 cut(s)	1005
Esp3I	CGTCTC	1 cut(s)	516
FaeI	CATG	6 cut(s)	454, 501, 835, 899, 1074, 1163
FalI	AAGNNNNNCTT	2 cut(s)	660, 692
FaqI	GGGAC	2 cut(s)	155, 961
FatI	CATG	6 cut(s)	450, 497, 831, 895, 1070, 1159
FauI	CCCGC	1 cut(s)	925
FbaI	TGATCA	1 cut(s)	436
FblI	GTMKAC	1 cut(s)	1067
Fnu4HI	GCNGC	7 cut(s)	223, 232, 818, 857, 1031, 1451, 1454
FokI	GGATG	5 cut(s)	492, 697, 1323, 1364, 1379
FriOI	GRGCYC	1 cut(s)	1005
Fsp4HI	GCNGC	7 cut(s)	223, 232, 818, 857, 1031, 1451, 1454
FspBI	CTAG	4 cut(s)	285, 597, 728, 1277
GlaI	GCGC	2 cut(s)	15, 157
GluI	GCNGC	7 cut(s)	223, 232, 818, 857, 1031, 1451, 1454
HaeII	RGCGCY	1 cut(s)	159
HaeIII	GGCC	5 cut(s)	138, 231, 488, 894, 977
HapII	CCGG	5 cut(s)	37, 87, 135, 139, 201
HgaI	GACGC	5 cut(s)	79, 106, 193, 248, 604
HhaI	GCGC	2 cut(s)	16, 158
Hin1I	GRCGYC	3 cut(s)	90, 204, 240
Hin1II	CATG	6 cut(s)	454, 501, 835, 899, 1074, 1163
Hin6I	GCGC	2 cut(s)	14, 156
HinP1I	GCGC	2 cut(s)	14, 156
HincII	GTYRAC	2 cut(s)	334, 829
HindII	GTYRAC	2 cut(s)	334, 829
HinfI	GANTC	4 cut(s)	9, 427, 835, 1417
HpaI	GTTAAC	1 cut(s)	829
HpaII	CCGG	5 cut(s)	37, 87, 135, 139, 201
HphI	GGTGA	7 cut(s)	73, 469, 596, 659, 677, 1108, 1412
Hpy166II	GTNNAC	6 cut(s)	334, 422, 829, 997, 1068, 1466
Hpy188I	TCNGA	3 cut(s)	191, 248, 1180
Hpy8I	GTNNAC	6 cut(s)	334, 422, 829, 997, 1068, 1466
Hpy99I	CGWCG	4 cut(s)	34, 95, 209, 248
HpyAV	CCTTC	4 cut(s)	871, 1141, 1175, 1407
HpyCH4III	ACNGT	4 cut(s)	338, 1211, 1369, 1463
HpyCH4IV	ACGT	2 cut(s)	29, 990
HpyCH4V	TGCA	6 cut(s)	348, 450, 817, 1112, 1194, 1219
HpyF10VI	GCNNNNNNNGC	8 cut(s)	92, 144, 153, 164, 228, 231, 354, 814
HpyF3I	CTNAG	6 cut(s)	152, 769, 1006, 1026, 1233, 1317
HpySE526I	ACGT	2 cut(s)	29, 990
Hsp92I	GRCGYC	3 cut(s)	90, 204, 240
Hsp92II	CATG	6 cut(s)	454, 501, 835, 899, 1074, 1163
HspAI	GCGC	2 cut(s)	14, 156
KpnI	GGTACC	1 cut(s)	848
KroI	GCCGGC	3 cut(s)	86, 134, 200
KroNI	GCCGGC	3 cut(s)	88, 136, 202
Ksp22I	TGATCA	1 cut(s)	436
KspAI	GTTAAC	1 cut(s)	829
Kzo9I	GATC	4 cut(s)	208, 436, 1017, 1288
LguI	GCTCTTC	1 cut(s)	607
LmnI	GCTCC	2 cut(s)	39, 612
Lsp1109I	GCAGC	4 cut(s)	829, 1042, 1437, 1440
MaeI	CTAG	4 cut(s)	285, 597, 728, 1277
MaeII	ACGT	2 cut(s)	29, 990
MaeIII	GTNAC	3 cut(s)	542, 584, 1114
MalI	GATC	4 cut(s)	210, 438, 1019, 1290
MboI	GATC	4 cut(s)	208, 436, 1017, 1288
MflI	RGATCY	1 cut(s)	1017
MhlI	GDGCHC	1 cut(s)	1005
MlsI	TGGCCA	1 cut(s)	894
MluCI	AATT	8 cut(s)	264, 513, 684, 706, 717, 954, 1044, 1132
MluNI	TGGCCA	1 cut(s)	894
MlyI	GAGTC	2 cut(s)	18, 829
MmeI	TCCRAC	1 cut(s)	226
Mox20I	TGGCCA	1 cut(s)	894
MreI	CGCCGGCG	2 cut(s)	86, 200
MroNI	GCCGGC	3 cut(s)	86, 134, 200
MscI	TGGCCA	1 cut(s)	894
MseI	TTAA	1 cut(s)	828
MslI	CAYNNNNRTG	2 cut(s)	455, 864
Msp20I	TGGCCA	1 cut(s)	894
MspA1I	CMGCKG	1 cut(s)	963
MspI	CCGG	5 cut(s)	37, 87, 135, 139, 201
MspR9I	CCNGG	2 cut(s)	140, 1225
MvaI	CCWGG	1 cut(s)	1225
MvnI	CGCG	1 cut(s)	14
MwoI	GCNNNNNNNGC	8 cut(s)	92, 144, 153, 164, 228, 231, 354, 814
NaeI	GCCGGC	3 cut(s)	88, 136, 202
NciI	CCSGG	1 cut(s)	140
NdeII	GATC	4 cut(s)	208, 436, 1017, 1288
NgoMIV	GCCGGC	3 cut(s)	86, 134, 200
NheI	GCTAGC	1 cut(s)	727
NlaIII	CATG	6 cut(s)	454, 501, 835, 899, 1074, 1163
NlaIV	GGNNCC	4 cut(s)	143, 529, 846, 1384
NmeAIII	GCCGAG	1 cut(s)	198
NmuCI	GTSAC	2 cut(s)	584, 1114
NspI	RCATGY	1 cut(s)	1074
NspV	TTCGAA	1 cut(s)	1268
PciSI	GCTCTTC	1 cut(s)	607
PcsI	WCGNNNNNNNCGW	4 cut(s)	105, 187, 204, 996
PdiI	GCCGGC	3 cut(s)	88, 136, 202
PfeI	GAWTC	2 cut(s)	427, 1417
PflFI	GACNNNGTC	1 cut(s)	242
PflMI	CCANNNNNTGG	1 cut(s)	476
PkrI	GCNGC	7 cut(s)	224, 233, 819, 858, 1032, 1452, 1455
PleI	GAGTC	2 cut(s)	17, 829
PpsI	GAGTC	2 cut(s)	17, 829
Psp6I	CCWGG	1 cut(s)	1223
PspEI	GGTNACC	1 cut(s)	584
PspGI	CCWGG	1 cut(s)	1223
PspN4I	GGNNCC	4 cut(s)	143, 529, 846, 1384
PspPI	GGNCC	3 cut(s)	142, 229, 467
PstI	CTGCAG	1 cut(s)	1114
PsuI	RGATCY	1 cut(s)	1017
PsyI	GACNNNGTC	1 cut(s)	242
RseI	CAYNNNNRTG	2 cut(s)	455, 864
SapI	GCTCTTC	1 cut(s)	607
SaqAI	TTAA	1 cut(s)	828
SatI	GCNGC	7 cut(s)	223, 232, 818, 857, 1031, 1451, 1454
Sau3AI	GATC	4 cut(s)	208, 436, 1017, 1288
Sau96I	GGNCC	3 cut(s)	142, 229, 467
ScaI	AGTACT	1 cut(s)	1082
SchI	GAGTC	2 cut(s)	18, 829
ScrFI	CCNGG	2 cut(s)	140, 1225
SduI	GDGCHC	1 cut(s)	1005
SfcI	CTRYAG	2 cut(s)	915, 1110
SfuI	TTCGAA	1 cut(s)	1268
SgrAI	CRCCGGYG	2 cut(s)	86, 200
SinI	GGWCC	2 cut(s)	142, 467
SmiMI	CAYNNNNRTG	2 cut(s)	455, 864
SmlI	CTYRAG	2 cut(s)	112, 590
SmoI	CTYRAG	2 cut(s)	112, 590
Sse9I	AATT	8 cut(s)	264, 513, 684, 706, 717, 954, 1044, 1132
SsiI	CCGC	9 cut(s)	84, 145, 222, 232, 455, 789, 857, 932, 963
SspI	AATATT	1 cut(s)	910
SspMI	CTAG	4 cut(s)	285, 597, 728, 1277
StyD4I	CCNGG	2 cut(s)	138, 1223
TaaI	ACNGT	4 cut(s)	338, 1211, 1369, 1463
TaiI	ACGT	2 cut(s)	32, 993
TaqI	TCGA	3 cut(s)	99, 207, 1268
TasI	AATT	8 cut(s)	264, 513, 684, 706, 717, 954, 1044, 1132
TatI	WGTACW	5 cut(s)	123, 1080, 1345, 1369, 1458
TauI	GCSGC	3 cut(s)	225, 234, 859
TfiI	GAWTC	2 cut(s)	427, 1417
Tru1I	TTAA	1 cut(s)	828
Tru9I	TTAA	1 cut(s)	828
TscAI	CASTG	4 cut(s)	421, 541, 770, 1216
TseFI	GTSAC	2 cut(s)	584, 1114
TseI	GCWGC	4 cut(s)	817, 1030, 1450, 1453
Tsp45I	GTSAC	2 cut(s)	584, 1114
TspDTI	ATGAA	5 cut(s)	17, 699, 723, 890, 1368
TspGWI	ACGGA	1 cut(s)	534
TspRI	CASTG	4 cut(s)	421, 541, 770, 1216
Tth111I	GACNNNGTC	1 cut(s)	242
Van91I	CCANNNNNTGG	1 cut(s)	476
VpaK11BI	GGWCC	2 cut(s)	142, 467
XapI	RAATTY	4 cut(s)	513, 684, 1044, 1132
XceI	RCATGY	1 cut(s)	1074
XcmI	CCANNNNNNNNNTGG	1 cut(s)	308
XmiI	GTMKAC	1 cut(s)	1067
XspI	CTAG	4 cut(s)	285, 597, 728, 1277
ZrmI	AGTACT	1 cut(s)	1082

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.