Belongs to the peptidase A1 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G05840 |
| fragaria_vesca | FvH4_4g12250 FvH4_4g12250 FvH4_4g12250 |
| malus_domestica | MD04G1028200.v1.1 |
| prunus_persica | Prupe.1G177600_v2.0.a1 Prupe.1G177600_v2.0.a1 Prupe.1G177600_v2.0.a1 |
| pyrus_communis | pycom04g02480 pycom13g29440 pycom13g29450 |
| rosa_chinensis | RchiOBHm_Chr4g0410011 RchiOBHm_Chr4g0410051 |
| rosa_laevigata | RLG00000008506 |
| rosa_multiflora | Rmu_sc0000023.1_g000006 Rmu_sc0019088.1_g000003 Rmu_sc0026249.1_g000001 Rmu_ssc0000186.1_g000008 |
| rosa_roxburghii | Rroxscaffold_5G00354520 Rroxscaffold_5G00354580 |
| rosa_rugosa | Rorug04G0100700 Rorug04G0100800 |
| rosa_samantha | Rh4AG159000 Rh4BG158300 Rh4BG172300 Rh4CG170300 Rh4DG154100 Rh6BG295000 |
| rosa_wichuraiana | Rw4G013170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 70, 188 |
| Acc65I | GGTACC | 1 cut(s) | 925 |
| AccB1I | GGYRCC | 2 cut(s) | 608, 925 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 557 |
| AccI | GTMKAC | 1 cut(s) | 1148 |
| AccII | CGCG | 2 cut(s) | 62, 95 |
| AcoI | YGGCCR | 3 cut(s) | 217, 567, 973 |
| AcsI | RAATTY | 3 cut(s) | 594, 765, 1125 |
| AcyI | GRCGYC | 4 cut(s) | 68, 171, 285, 321 |
| AfaI | GTAC | 7 cut(s) | 206, 381, 565, 927, 1048, 1079, 1163 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 302, 557, 661 |
| AgsI | TTSAA | 5 cut(s) | 33, 425, 968, 1010, 1123 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 658 |
| AjiI | CACGTC | 1 cut(s) | 1072 |
| AluBI | AGCT | 7 cut(s) | 123, 248, 450, 466, 681, 808, 812 |
| AluI | AGCT | 7 cut(s) | 123, 248, 450, 466, 681, 808, 812 |
| Alw26I | GTCTC | 2 cut(s) | 363, 597 |
| Ama87I | CYCGRG | 2 cut(s) | 307, 1165 |
| AoxI | GGCC | 5 cut(s) | 217, 310, 567, 973, 1056 |
| ApeKI | GCWGC | 2 cut(s) | 898, 1111 |
| ApoI | RAATTY | 3 cut(s) | 594, 765, 1125 |
| Asp718I | GGTACC | 1 cut(s) | 925 |
| AspLEI | GCGC | 2 cut(s) | 97, 239 |
| AspS9I | GGNCC | 3 cut(s) | 223, 310, 548 |
| AsuC2I | CCSGG | 1 cut(s) | 221 |
| AsuHPI | GGTGA | 5 cut(s) | 154, 550, 677, 740, 758 |
| AsuNHI | GCTAGC | 1 cut(s) | 808 |
| AvaI | CYCGRG | 2 cut(s) | 307, 1165 |
| AvaII | GGWCC | 2 cut(s) | 223, 548 |
| BalI | TGGCCA | 1 cut(s) | 975 |
| BanI | GGYRCC | 2 cut(s) | 608, 925 |
| BanII | GRGCYC | 1 cut(s) | 1086 |
| BbsI | GAAGAC | 2 cut(s) | 66, 483 |
| BbvI | GCAGC | 2 cut(s) | 910, 1123 |
| BccI | CCATC | 2 cut(s) | 755, 848 |
| BceAI | ACGGC | 5 cut(s) | 55, 173, 308, 582, 622 |
| BclI | TGATCA | 1 cut(s) | 517 |
| BcnI | CCSGG | 1 cut(s) | 221 |
| BcoDI | GTCTC | 2 cut(s) | 363, 597 |
| BfaI | CTAG | 3 cut(s) | 366, 678, 809 |
| BfmI | CTRYAG | 1 cut(s) | 996 |
| BfoI | RGCGCY | 1 cut(s) | 240 |
| BglII | AGATCT | 1 cut(s) | 1098 |
| BisI | GCNGC | 5 cut(s) | 304, 313, 899, 938, 1112 |
| BlsI | GCNGC | 5 cut(s) | 305, 314, 900, 939, 1113 |
| BmcAI | AGTACT | 1 cut(s) | 1163 |
| Bme1390I | CCNGG | 1 cut(s) | 221 |
| Bme18I | GGWCC | 2 cut(s) | 223, 548 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 658 |
| BmeT110I | CYCGRG | 2 cut(s) | 307, 1165 |
| BmgBI | CACGTC | 1 cut(s) | 1072 |
| BmgT120I | GGNCC | 3 cut(s) | 223, 310, 548 |
| BmiI | GGNNCC | 3 cut(s) | 224, 610, 927 |
| BmrFI | CCNGG | 1 cut(s) | 221 |
| BmtI | GCTAGC | 1 cut(s) | 812 |
| BpiI | GAAGAC | 2 cut(s) | 66, 483 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 81, 113, 112, 144 |
| BpmI | CTGGAG | 1 cut(s) | 21 |
| BpuEI | CTTGAG | 2 cut(s) | 214, 656 |
| BpuMI | CCSGG | 1 cut(s) | 221 |
| BsaHI | GRCGYC | 4 cut(s) | 68, 171, 285, 321 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 252, 282, 596, 626 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 302, 557, 661 |
| Bse118I | RCCGGY | 3 cut(s) | 167, 215, 281 |
| Bse1I | ACTGG | 2 cut(s) | 397, 502 |
| BseGI | GGATG | 2 cut(s) | 566, 791 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 302, 557, 661 |
| BseMII | CTCAG | 2 cut(s) | 247, 1121 |
| BseNI | ACTGG | 2 cut(s) | 397, 502 |
| BseRI | GAGGAG | 1 cut(s) | 131 |
| BseX3I | CGGCCG | 1 cut(s) | 217 |
| BseXI | GCAGC | 2 cut(s) | 910, 1123 |
| BsgI | GTGCAG | 1 cut(s) | 917 |
| Bsh1236I | CGCG | 2 cut(s) | 62, 95 |
| Bsh1285I | CGRYCG | 2 cut(s) | 60, 220 |
| BshFI | GGCC | 5 cut(s) | 219, 312, 569, 975, 1058 |
| BshNI | GGYRCC | 2 cut(s) | 608, 925 |
| BsiEI | CGRYCG | 2 cut(s) | 60, 220 |
| BsiHKCI | CYCGRG | 2 cut(s) | 307, 1165 |
| BsiSI | CCGG | 5 cut(s) | 118, 168, 216, 220, 282 |
| BslFI | GGGAC | 2 cut(s) | 236, 1042 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 302, 557, 661 |
| BsmAI | GTCTC | 2 cut(s) | 363, 597 |
| BsmBI | CGTCTC | 1 cut(s) | 597 |
| BsmFI | GGGAC | 2 cut(s) | 236, 1042 |
| BsnI | GGCC | 5 cut(s) | 219, 312, 569, 975, 1058 |
| BsoBI | CYCGRG | 2 cut(s) | 307, 1165 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1086 |
| Bsp1407I | TGTACA | 1 cut(s) | 379 |
| Bsp143I | GATC | 3 cut(s) | 289, 517, 1098 |
| BspANI | GGCC | 5 cut(s) | 219, 312, 569, 975, 1058 |
| BspCNI | CTCAG | 2 cut(s) | 246, 1120 |
| BspFNI | CGCG | 2 cut(s) | 62, 95 |
| BspLI | GGNNCC | 3 cut(s) | 224, 610, 927 |
| BspOI | GCTAGC | 1 cut(s) | 812 |
| BspQI | GCTCTTC | 1 cut(s) | 688 |
| BspT107I | GGYRCC | 2 cut(s) | 608, 925 |
| BsrFI | RCCGGY | 3 cut(s) | 167, 215, 281 |
| BsrGI | TGTACA | 1 cut(s) | 379 |
| BsrI | ACTGG | 2 cut(s) | 397, 502 |
| BssAI | RCCGGY | 3 cut(s) | 167, 215, 281 |
| BssMI | GATC | 3 cut(s) | 289, 517, 1098 |
| BssNAI | GTATAC | 1 cut(s) | 1149 |
| BssNI | GRCGYC | 4 cut(s) | 68, 171, 285, 321 |
| Bst1107I | GTATAC | 1 cut(s) | 1149 |
| Bst4CI | ACNGT | 1 cut(s) | 419 |
| Bst6I | CTCTTC | 4 cut(s) | 135, 140, 688, 1140 |
| BstACI | GRCGYC | 4 cut(s) | 68, 171, 285, 321 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 435 |
| BstAUI | TGTACA | 1 cut(s) | 379 |
| BstC8I | GCNNGC | 4 cut(s) | 169, 217, 283, 810 |
| BstDEI | CTNAG | 4 cut(s) | 233, 850, 1087, 1107 |
| BstEII | GGTNACC | 1 cut(s) | 665 |
| BstF5I | GGATG | 2 cut(s) | 566, 791 |
| BstFNI | CGCG | 2 cut(s) | 62, 95 |
| BstH2I | RGCGCY | 1 cut(s) | 240 |
| BstHHI | GCGC | 2 cut(s) | 97, 239 |
| BstKTI | GATC | 3 cut(s) | 292, 520, 1101 |
| BstMAI | GTCTC | 2 cut(s) | 363, 597 |
| BstMBI | GATC | 3 cut(s) | 289, 517, 1098 |
| BstMCI | CGRYCG | 2 cut(s) | 60, 220 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 173, 225, 234, 245, 309, 312, 435, 895 |
| BstNSI | RCATGY | 1 cut(s) | 1155 |
| BstPI | GGTNACC | 1 cut(s) | 665 |
| BstSCI | CCNGG | 1 cut(s) | 219 |
| BstSFI | CTRYAG | 1 cut(s) | 996 |
| BstUI | CGCG | 2 cut(s) | 62, 95 |
| BstV1I | GCAGC | 2 cut(s) | 910, 1123 |
| BstV2I | GAAGAC | 2 cut(s) | 66, 483 |
| BstX2I | RGATCY | 1 cut(s) | 1098 |
| BstYI | RGATCY | 1 cut(s) | 1098 |
| BstZ17I | GTATAC | 1 cut(s) | 1149 |
| BstZI | CGGCCG | 1 cut(s) | 217 |
| BsuRI | GGCC | 5 cut(s) | 219, 312, 569, 975, 1058 |
| BtrI | CACGTC | 1 cut(s) | 1072 |
| BtsCI | GGATG | 2 cut(s) | 566, 791 |
| BtsI | GCAGTG | 2 cut(s) | 615, 844 |
| BtsIMutI | CAGTG | 3 cut(s) | 495, 615, 844 |
| Cac8I | GCNNGC | 4 cut(s) | 169, 217, 283, 810 |
| CfoI | GCGC | 2 cut(s) | 97, 239 |
| Cfr10I | RCCGGY | 3 cut(s) | 167, 215, 281 |
| Cfr13I | GGNCC | 3 cut(s) | 223, 310, 548 |
| CseI | GACGC | 6 cut(s) | 76, 160, 187, 274, 329, 685 |
| Csp6I | GTAC | 7 cut(s) | 205, 380, 564, 926, 1047, 1078, 1162 |
| CviAII | CATG | 6 cut(s) | 82, 532, 579, 913, 977, 1152 |
| CviQI | GTAC | 7 cut(s) | 205, 380, 564, 926, 1047, 1078, 1162 |
| DdeI | CTNAG | 4 cut(s) | 233, 850, 1087, 1107 |
| DpnI | GATC | 3 cut(s) | 291, 519, 1100 |
| DpnII | GATC | 3 cut(s) | 289, 517, 1098 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 70, 188 |
| DriI | GACNNNNNGTC | 1 cut(s) | 658 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 70, 188 |
| EaeI | YGGCCR | 3 cut(s) | 217, 567, 973 |
| EagI | CGGCCG | 1 cut(s) | 217 |
| Eam1104I | CTCTTC | 4 cut(s) | 135, 140, 688, 1140 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 658 |
| EarI | CTCTTC | 4 cut(s) | 135, 140, 688, 1140 |
| EciI | GGCGGA | 1 cut(s) | 67 |
| EclXI | CGGCCG | 1 cut(s) | 217 |
| Eco24I | GRGCYC | 1 cut(s) | 1086 |
| Eco32I | GATATC | 1 cut(s) | 481 |
| Eco47I | GGWCC | 2 cut(s) | 223, 548 |
| Eco52I | CGGCCG | 1 cut(s) | 217 |
| Eco88I | CYCGRG | 2 cut(s) | 307, 1165 |
| Eco91I | GGTNACC | 1 cut(s) | 665 |
| EcoO65I | GGTNACC | 1 cut(s) | 665 |
| EcoRI | GAATTC | 1 cut(s) | 765 |
| EcoRV | GATATC | 1 cut(s) | 481 |
| EcoT38I | GRGCYC | 1 cut(s) | 1086 |
| Esp3I | CGTCTC | 1 cut(s) | 597 |
| FaeI | CATG | 6 cut(s) | 85, 535, 582, 916, 980, 1155 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 741, 773 |
| FaqI | GGGAC | 2 cut(s) | 236, 1042 |
| FatI | CATG | 6 cut(s) | 81, 531, 578, 912, 976, 1151 |
| FauI | CCCGC | 1 cut(s) | 1006 |
| FbaI | TGATCA | 1 cut(s) | 517 |
| FblI | GTMKAC | 1 cut(s) | 1148 |
| Fnu4HI | GCNGC | 5 cut(s) | 304, 313, 899, 938, 1112 |
| FokI | GGATG | 2 cut(s) | 573, 778 |
| FriOI | GRGCYC | 1 cut(s) | 1086 |
| Fsp4HI | GCNGC | 5 cut(s) | 304, 313, 899, 938, 1112 |
| FspBI | CTAG | 3 cut(s) | 366, 678, 809 |
| GlaI | GCGC | 2 cut(s) | 96, 238 |
| GluI | GCNGC | 5 cut(s) | 304, 313, 899, 938, 1112 |
| GsuI | CTGGAG | 1 cut(s) | 21 |
| HaeII | RGCGCY | 1 cut(s) | 240 |
| HaeIII | GGCC | 5 cut(s) | 219, 312, 569, 975, 1058 |
| HapII | CCGG | 5 cut(s) | 118, 168, 216, 220, 282 |
| HgaI | GACGC | 6 cut(s) | 76, 160, 187, 274, 329, 685 |
| HhaI | GCGC | 2 cut(s) | 97, 239 |
| Hin1I | GRCGYC | 4 cut(s) | 68, 171, 285, 321 |
| Hin1II | CATG | 6 cut(s) | 85, 535, 582, 916, 980, 1155 |
| Hin6I | GCGC | 2 cut(s) | 95, 237 |
| HinP1I | GCGC | 2 cut(s) | 95, 237 |
| HincII | GTYRAC | 2 cut(s) | 415, 910 |
| HindII | GTYRAC | 2 cut(s) | 415, 910 |
| HinfI | GANTC | 3 cut(s) | 90, 508, 916 |
| HpaI | GTTAAC | 1 cut(s) | 910 |
| HpaII | CCGG | 5 cut(s) | 118, 168, 216, 220, 282 |
| HphI | GGTGA | 5 cut(s) | 154, 550, 677, 740, 758 |
| Hpy166II | GTNNAC | 5 cut(s) | 415, 503, 910, 1078, 1149 |
| Hpy188I | TCNGA | 1 cut(s) | 272 |
| Hpy188III | TCNNGA | 9 cut(s) | 145, 179, 193, 251, 521, 673, 819, 1067, 1167 |
| Hpy8I | GTNNAC | 5 cut(s) | 415, 503, 910, 1078, 1149 |
| Hpy99I | CGWCG | 8 cut(s) | 46, 55, 58, 67, 70, 115, 176, 290 |
| HpyAV | CCTTC | 2 cut(s) | 952, 1164 |
| HpyCH4III | ACNGT | 1 cut(s) | 419 |
| HpyCH4IV | ACGT | 2 cut(s) | 110, 1071 |
| HpyCH4V | TGCA | 3 cut(s) | 429, 531, 898 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 173, 225, 234, 245, 309, 312, 435, 895 |
| HpyF3I | CTNAG | 4 cut(s) | 233, 850, 1087, 1107 |
| HpySE526I | ACGT | 2 cut(s) | 110, 1071 |
| Hsp92I | GRCGYC | 4 cut(s) | 68, 171, 285, 321 |
| Hsp92II | CATG | 6 cut(s) | 85, 535, 582, 916, 980, 1155 |
| HspAI | GCGC | 2 cut(s) | 95, 237 |
| KpnI | GGTACC | 1 cut(s) | 929 |
| KroI | GCCGGC | 3 cut(s) | 167, 215, 281 |
| KroNI | GCCGGC | 3 cut(s) | 169, 217, 283 |
| Ksp22I | TGATCA | 1 cut(s) | 517 |
| KspAI | GTTAAC | 1 cut(s) | 910 |
| Kzo9I | GATC | 3 cut(s) | 289, 517, 1098 |
| LguI | GCTCTTC | 1 cut(s) | 688 |
| LmnI | GCTCC | 2 cut(s) | 120, 693 |
| Lsp1109I | GCAGC | 2 cut(s) | 910, 1123 |
| MaeI | CTAG | 3 cut(s) | 366, 678, 809 |
| MaeII | ACGT | 2 cut(s) | 110, 1071 |
| MaeIII | GTNAC | 2 cut(s) | 623, 665 |
| MalI | GATC | 3 cut(s) | 291, 519, 1100 |
| MboI | GATC | 3 cut(s) | 289, 517, 1098 |
| MflI | RGATCY | 1 cut(s) | 1098 |
| MhlI | GDGCHC | 1 cut(s) | 1086 |
| MlsI | TGGCCA | 1 cut(s) | 975 |
| MluCI | AATT | 7 cut(s) | 345, 594, 765, 787, 798, 1035, 1125 |
| MluNI | TGGCCA | 1 cut(s) | 975 |
| MlyI | GAGTC | 2 cut(s) | 99, 910 |
| MmeI | TCCRAC | 1 cut(s) | 307 |
| MnlI | CCTC | 9 cut(s) | 138, 149, 152, 306, 372, 450, 622, 680, 860 |
| Mox20I | TGGCCA | 1 cut(s) | 975 |
| MreI | CGCCGGCG | 2 cut(s) | 167, 281 |
| MroNI | GCCGGC | 3 cut(s) | 167, 215, 281 |
| MscI | TGGCCA | 1 cut(s) | 975 |
| MseI | TTAA | 1 cut(s) | 909 |
| MslI | CAYNNNNRTG | 2 cut(s) | 536, 945 |
| Msp20I | TGGCCA | 1 cut(s) | 975 |
| MspA1I | CMGCKG | 1 cut(s) | 1044 |
| MspI | CCGG | 5 cut(s) | 118, 168, 216, 220, 282 |
| MspR9I | CCNGG | 1 cut(s) | 221 |
| MvnI | CGCG | 2 cut(s) | 62, 95 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 173, 225, 234, 245, 309, 312, 435, 895 |
| NaeI | GCCGGC | 3 cut(s) | 169, 217, 283 |
| NciI | CCSGG | 1 cut(s) | 221 |
| NdeII | GATC | 3 cut(s) | 289, 517, 1098 |
| NgoMIV | GCCGGC | 3 cut(s) | 167, 215, 281 |
| NheI | GCTAGC | 1 cut(s) | 808 |
| NlaIII | CATG | 6 cut(s) | 85, 535, 582, 916, 980, 1155 |
| NlaIV | GGNNCC | 3 cut(s) | 224, 610, 927 |
| NmeAIII | GCCGAG | 1 cut(s) | 279 |
| NmuCI | GTSAC | 1 cut(s) | 665 |
| NspI | RCATGY | 1 cut(s) | 1155 |
| PciSI | GCTCTTC | 1 cut(s) | 688 |
| PcsI | WCGNNNNNNNCGW | 7 cut(s) | 50, 59, 62, 186, 268, 285, 1077 |
| PdiI | GCCGGC | 3 cut(s) | 169, 217, 283 |
| PfeI | GAWTC | 1 cut(s) | 508 |
| PflFI | GACNNNGTC | 1 cut(s) | 70 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 557 |
| PkrI | GCNGC | 5 cut(s) | 305, 314, 900, 939, 1113 |
| PleI | GAGTC | 2 cut(s) | 98, 910 |
| PpsI | GAGTC | 2 cut(s) | 98, 910 |
| PspEI | GGTNACC | 1 cut(s) | 665 |
| PspN4I | GGNNCC | 3 cut(s) | 224, 610, 927 |
| PspPI | GGNCC | 3 cut(s) | 223, 310, 548 |
| PsuI | RGATCY | 1 cut(s) | 1098 |
| PsyI | GACNNNGTC | 1 cut(s) | 70 |
| RsaI | GTAC | 7 cut(s) | 206, 381, 565, 927, 1048, 1079, 1163 |
| RsaNI | GTAC | 7 cut(s) | 205, 380, 564, 926, 1047, 1078, 1162 |
| RseI | CAYNNNNRTG | 2 cut(s) | 536, 945 |
| SapI | GCTCTTC | 1 cut(s) | 688 |
| SaqAI | TTAA | 1 cut(s) | 909 |
| SatI | GCNGC | 5 cut(s) | 304, 313, 899, 938, 1112 |
| Sau3AI | GATC | 3 cut(s) | 289, 517, 1098 |
| Sau96I | GGNCC | 3 cut(s) | 223, 310, 548 |
| ScaI | AGTACT | 1 cut(s) | 1163 |
| SchI | GAGTC | 2 cut(s) | 99, 910 |
| ScrFI | CCNGG | 1 cut(s) | 221 |
| SduI | GDGCHC | 1 cut(s) | 1086 |
| SfcI | CTRYAG | 1 cut(s) | 996 |
| SgrAI | CRCCGGYG | 2 cut(s) | 167, 281 |
| SinI | GGWCC | 2 cut(s) | 223, 548 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 536, 945 |
| SmlI | CTYRAG | 2 cut(s) | 193, 671 |
| SmoI | CTYRAG | 2 cut(s) | 193, 671 |
| Sse9I | AATT | 7 cut(s) | 345, 594, 765, 787, 798, 1035, 1125 |
| SspI | AATATT | 1 cut(s) | 991 |
| SspMI | CTAG | 3 cut(s) | 366, 678, 809 |
| StyD4I | CCNGG | 1 cut(s) | 219 |
| TaaI | ACNGT | 1 cut(s) | 419 |
| TaiI | ACGT | 2 cut(s) | 113, 1074 |
| TaqI | TCGA | 2 cut(s) | 180, 288 |
| TasI | AATT | 7 cut(s) | 345, 594, 765, 787, 798, 1035, 1125 |
| TatI | WGTACW | 3 cut(s) | 204, 379, 1161 |
| TauI | GCSGC | 3 cut(s) | 306, 315, 940 |
| TfiI | GAWTC | 1 cut(s) | 508 |
| Tru1I | TTAA | 1 cut(s) | 909 |
| Tru9I | TTAA | 1 cut(s) | 909 |
| TscAI | CASTG | 3 cut(s) | 502, 622, 851 |
| TseFI | GTSAC | 1 cut(s) | 665 |
| TseI | GCWGC | 2 cut(s) | 898, 1111 |
| Tsp45I | GTSAC | 1 cut(s) | 665 |
| TspDTI | ATGAA | 4 cut(s) | 98, 780, 804, 971 |
| TspGWI | ACGGA | 1 cut(s) | 615 |
| TspRI | CASTG | 3 cut(s) | 502, 622, 851 |
| Tth111I | GACNNNGTC | 1 cut(s) | 70 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 557 |
| VpaK11BI | GGWCC | 2 cut(s) | 223, 548 |
| XapI | RAATTY | 3 cut(s) | 594, 765, 1125 |
| XceI | RCATGY | 1 cut(s) | 1155 |
| XmiI | GTMKAC | 1 cut(s) | 1148 |
| XspI | CTAG | 3 cut(s) | 366, 678, 809 |
| ZrmI | AGTACT | 1 cut(s) | 1163 |